mRNA_Ecto-sp8_S_contig10345.561.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: A0A6H5KK48_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KK48_9PHAE) HSP 1 Score: 1051 bits (2719), Expect = 0.000e+0 Identity = 562/592 (94.93%), Postives = 571/592 (96.45%), Query Frame = 1
Query: 1 MARAGVVLVLAGLAWPHDNLPFALGARNTPPYGRCRRRRETSSTSSFVPSATVTALHVGSREAWGLLRSSTRSRVRPRAGRCSMYSERIRDSPDGERMRSAEVEHQSSLNRTPTPARREYGNGLAADGVGSMRADTIGGLALPLDLGRASRITRVEVDNLAMVDNVSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLADGGRRLRVNRTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGLGGSADDASLLHHWVEELDEFREGEMAFMDRMRSVVESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEGSRGGVEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIGKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLEDLVKSAGEKLERSVESLPVLPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKEERWRAAAEEAAGELSAVRRR 1776
MARAGVVLVLAGLAWPHD LPFALGARNTPPYGRCRRRRETSS SSFVPSAT TALHVG+R AWGLLRS R+RVRPRA RCSMYSERIRDSPDGERMRSAE EHQSSLNRTP PARR YGNGLAA VGSMR DTIGGLALPLDLGRASRITRVEVDNLAMV+NVSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPL DGGRRLRV RTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGR+RALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGG GGSADDASLLHHWVEELDEFREGEMAFMDRMRS+VE FVDDWGED+LGPLAEPFLSGTLLSD+DAEEG RGGVEGLSDLWPRLSRV EGMEDLEASRTKVELARQLAVEQSNP+SIAHAI KIRGLLIDAEDENVGLSQDLLEGTHEDLNSL+DLVKS GEKLERSVESLPVLPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKEERWRAAAEEAAGELSAVRRR
Sbjct: 1 MARAGVVLVLAGLAWPHDTLPFALGARNTPPYGRCRRRRETSSMSSFVPSATATALHVGNRAAWGLLRSKIRARVRPRARRCSMYSERIRDSPDGERMRSAESEHQSSLNRTPPPARRGYGNGLAAGSVGSMRVDTIGGLALPLDLGRASRITRVEVDNLAMVENVSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLEDGGRRLRVYRTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRMRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGPGGSADDASLLHHWVEELDEFREGEMAFMDRMRSIVERFVDDWGEDILGPLAEPFLSGTLLSDKDAEEGLRGGVEGLSDLWPRLSRVREGMEDLEASRTKVELARQLAVEQSNPDSIAHAIVKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLDDLVKSVGEKLERSVESLPVLPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKEERWRAAAEEAAGELSAVRRR 592
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: B8C1M4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1M4_THAPS) HSP 1 Score: 107 bits (266), Expect = 1.820e-20 Identity = 132/475 (27.79%), Postives = 201/475 (42.32%), Query Frame = 1
Query: 442 RASRITRVEVDNLAMVDN------VSIKLGRG---LVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEV------LERFGVP-------LADGGRRLRVNRTV-----GGKGSSASVNGCSVKLGALRELMSPLIYTVDANAFEL-FSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCR---FEGGLGGSA-------DDASLLHHWVEELDEFREGEMAFMDRMRSVV-ESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEGSRGGVEGLSD--LWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIGKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLEDLVKSAGEKLE-------RSVESLPVLPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKEER 1722
R+S+I ++ N+A + N + + G +AVTGE+G+GKSL+ S + DLV G A L L EG + V LERFG+ + +L + RT+ G S +NG + L +LR + +PL VD A +R RL +D E +L + K+A +R RL+ + GS D LL HWV+EL++F F D + E +D + E SG L + ++ ++ + GG D L+ + E ++ +E+ A + S+PES A A+ K+R LL +N G D +E TH+ LN +E + ++ ++E + I++EE++ W LARKHG+ P L LR ELD V A LP A EKEER
Sbjct: 92 RSSQIVSIKSTNIAGLTNSQGTSDIEVNFGSNGACFIAVTGESGSGKSLLVS----------KAVDLV--TGGKAVATLVPTLGEGGEDERSSVEMISSSLERFGIDPTILSNDQSTMTNQLHLQRTLQWSDTGRLKSICRINGKHISLKSLRHIAAPLFTRVDVGAAATALARPASRLAMIDM---GVEDSLKQNCLEMRESYKRARKKRMRLKSELESRVLPSSMQGSGYTSTSEEDQTELLGHWVDELEKFETRTNLFRDALLGQYNELMMDQYNEH-----DNKKSSGLLNTLQNFKKTTWGGGNASEDNSLFATILEFREEIKAVESQLASAHAAYESLASLSSPESAAVALEKVRKLLYSISRDNSGPLFDSIETTHDLLNEVESSLNECARSIDGDSNSVISTLEQMICNGISIEEIDNIVADWNSLARKHGISPYALPKCHESLRQELDGNVEALLLLPEA-EKEER 545
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: K0S5J6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S5J6_THAOC) HSP 1 Score: 100 bits (248), Expect = 2.570e-18 Identity = 135/480 (28.12%), Postives = 220/480 (45.83%), Query Frame = 1
Query: 427 PLDLGRASRITRVEVDNLA-MVDNVSIKL-GRG-LVAVTGETGTGKSL-ISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLA-------DGGRRLRVNRTV------GGKGSSASVNGCSVKLGALRELMSPLIYTVD-ANAFELFSRADGRLRALDRMFTPAEVAL--ADKARSVVAQLKQAEARRARLEQRCRFEGGLGGSADDAS-----LLHHWVEELDEFREGEMAFMDRMRSVVESFVDDWGEDMLGPLAEPFLSGTLLSDE-DAEEGSRGGVEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIGKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLEDLVKSAGEKLERSVESLPVLP------ITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKEERWRAAAEEAAGELSAVR 1770
P D+ SR++ ++ N+A + +V + GR LVAVTGE+GTGKSL +S LA GA+ + L S+ + A V + E H +S A LE G+ + DGG + + RT+ G ++ S+NG +V + LREL + L VD A A + R RL LDR P + + A+K A ++ E+ L+ R + GS DD ++ HWV+ELD F R+ + V++ + GE LG + + + +S++ D E L+ + + +G+ ++ ++A + ++ S A+ R +L + ++ G + +E THE LN+ E ++ ++ + +P+L I ++ +E W L+RKHG+ E L LR ELD V A P A+E E R R A + ELS R
Sbjct: 43 PSDIEPFSRLSSIKACNIAGLGPSVEVTFSGRARLVAVTGESGTGKSLLVSKVLGLATGAKFSSSILSTSKPAVAEVSAIIH--EPHLSSFATSLEIHGIDSSEILCVDEDGGCEIHLRRTLIHNERSGRTTTTCSINGRNVSVKTLRELTAHLFTRVDVAVASQALGRPAARLTILDRG-VPEHLLIDCANKRDDYKAAKRKRESIEGELKSRV-LPQNIRGSKDDLDEDQIEMMRHWVDELDSFEL-------RVATFVQNTIAQDGE--LGVSLKMLRNASWVSEQADTNEDFS--------LFNCILNLRDGLRVTQSQLESSQMAYE-SLASVRDFSAQIALENTRKILYEVCTDDRGQIFEAVERTHELLNAAEIAIEECARSIDGDL--IPILEKRAHTGINIDALEGLIGDWNGLSRKHGIASELLPKCHKTLREELDGDVKALNQWPKAKEDERRAREAYSASCAELSNAR 498
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: A0A7S2PIS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PIS7_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.700e-18 Identity = 129/475 (27.16%), Postives = 206/475 (43.37%), Query Frame = 1
Query: 448 SRITRVEVDNLAMVDN------VSIKLGRG--LVAVTGETGTGKSL-ISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGV-PL----------ADGGRR---------LRVNRTV--GGKGSSASV---NGCSVKLGALRELMSPLIYTVDAN-AFELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCR-------FEGGLGGSA---DDASLLHHWVEELDEFREGEMAFMDRMRSVVESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEGSRGGVEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIGKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLEDLVKSAGEKLE-------RSVESLPVLPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKE 1716
S I V+ N+A + N + I+ G LV VTGE+G+GKSL +S A + G + LV + + ++L + L E H ++ + L+ FG+ PL D G L + RT+ G G S+ N V L LRE+ SPL TVD A +RA RL LD + ++R V K+A RR ++++ +G GS + LL HWV+ELD F A ++R + + + D GP + +S TL + G + + L + E ++ +E+ A + + ES A ++ ++R LL ++ G + +E THE LN +E+ + ++ ++E+ +++EEV+ W LARKHG+ P L + LR E+D V A + LP A E E
Sbjct: 82 SHIVSVKSHNIAGIVNDKGNCDIEIEFGSAACLVCVTGESGSGKSLLVSKALDVVTGGKATNT-LVQDQDKESWIELIVRLCEPHLSTVSSTLQHFGIDPLILYHQHTEDTTDVGDHNNEHASVGYLHLQRTLVAGSSGKLKSICRINEKHVSLKTLREIASPLFTTVDVGVASGALARAASRLAMLDIGVEDSLKQQCIQSRDV---FKEATKRRKKIKKELESRILPSSMQGNAYGSELEQEQIELLEHWVDELDMFE----ARVNRFQETIYEQYSELIADGNGPGSNNIIS-TLQKFRECVWGEHNDDD--DSILANLLQFREDIKAVESQLIAANAAYEGLASLTATESAAVSLERVRKLLYTISSDDSGPMFEKVERTHELLNIVEESLNECARSIDGGSNSIISTLENARSTGVSMEEVDGLVADWNALARKHGISPYALPTCHTSLRQEIDGNVEALKLLPEAEEDE 545
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: A0A1Z5K9M0_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9M0_FISSO) HSP 1 Score: 95.5 bits (236), Expect = 7.890e-17 Identity = 122/468 (26.07%), Postives = 202/468 (43.16%), Query Frame = 1
Query: 430 LDLGRASRITRVEVDNLAMV-----DN-VSIKLGRGLVAVTGETGTGKSL-ISSAFSLAAGARVRGADLVGSR-------GSTAAVQLQLELAEGHRASTAEVLERFGVPLADGGRRLRVNRTVGGKG----SSASVNGCSVKLGALRELMSPLIYTVDAN-AFELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCR---FEGGLGGSADDAS--LLHHWVEELDEFREGEMAFMDRMRSVVESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEGSRGGVEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIGKIRGLLIDA---EDENVGLSQDLLEGT---HEDLNSLEDLVKSAGEKLE-------RSVESLPV-LPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKEE 1719
L L + I + NLA DN + I G+ A+TGETG+GKSL ++ A + G + L+GS+ G V+L+L L + + LE GV + G + V +G S +N V L AL ++ VDA+ A S+ + RL +D +P ++ + AR Q +QA +R +E+ + S DD + L++HW+ EL FR+ F +R+ +E + + + L ++ +EG+ ++ L + + L+ + AR S+ +S AI K R ++D+ D ++ L + T HE LN++E + + + +E R++E L P +LEE++ + W LARKHG+ P L + L+ E D V A + LP A E EE
Sbjct: 61 LALSDKNYIASIRSQNLAGAQSSRKDNQIVIDFQNGMTAITGETGSGKSLFVARALEVVTGGKGISTALLGSKNSEDVKVGEPVVVELELNLCGHYLKAAKSFLETIGVDVPSTGMMVLRRSLVVQQGRRVKSICHINNQQVTLKALTAFSRSMVTVVDASTAAAALSKPEARLAIIDSAVSPNLLSEVNDARR---QYRQARRKREAIERELKKRVLPSTFVQSDDDENVELMNHWIRELGVFRDRVQVFRERVARSIEQ---------INEVHDAILRFAESDWDNDDEGA---------MFEALMDFRDVIVSLDEQLVAAQNARDALAALSSDQSAITAIEKTRSFIMDSLGSGDHGKASTRSLQKATERSHELLNAVEYALHACSKFMEDDEKGLIRTIEYLRENCPFSLEEIDSLLLDWSSLARKHGIIPSSLPTCHRSLKNERDGNVNARQLLPAAVEDEE 507
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: B7G2S7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2S7_PHATC) HSP 1 Score: 95.1 bits (235), Expect = 1.120e-16 Identity = 127/456 (27.85%), Postives = 187/456 (41.01%), Query Frame = 1
Query: 496 VSIKLGRGLVAVTGETGTGKSL-ISSAFSLAAGARVRGA----------DLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGV-------------------------PLADGGR-RLRVNRTVGGKGSSASVNGCSVKLGALRELMSPLIYTVDAN-AFELFSRADGRLRALDRMFTPA--EVALADKARSVVAQLKQAEARRARLEQRCRFEGGLGGSADDASLLHHWVEELDEFREGEMAFMDRMRSVVESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEGSRGGVEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIGKIRGLLIDA----EDENVGLSQDLLEGTHEDLNSLEDLVKSAGEKLE-----RSVESLPVLPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKE 1716
++I G+ LVAVTGETG+GKSL + +L G + + + S G T V++ L L + H +T LER GV LA R +LR+ S+ S+NG SV L AL + PL+ TVDA A + + LD P KA+ V + ++ E A L R S +D LL HW++E+D F M+F S + D L + T + E GSR S L+ + + + + D + A + S ES ++ + R LL DA E N +SQ E +HE LNS+E + + +E R E P ++E V+ ++W LARKHG+ P L S L+ E + V A + LP + E+E
Sbjct: 109 INIAPGQNLVAVTGETGSGKSLLVGKVVNLLCGGKATPSLVATFEPHEDSTLYSGGVTTVVEMDLLLTDPHLGATKATLERLGVNSSLLFSAATNSSCGILCLRRSLATSLATSERAKLRLK-------SACSINGQSVTLKALATVAGPLLATVDAGIAANALVKTTSLMAILDTAVKPQVKTYMTQSKAKYRVCR-REREVLEAELASRVLPTSYTSDSLNDVELLTHWIDEIDAFESRVMSFCK-----FASGLQDSNGSALETARAELATATWM-----ENGSRRPNIFSSRLYDCIVMLRDAIRDADNQIVAAYDAIETLSSMSRSESTMSSLERARKLLFDAAQSEESPNSKISQ-AAEESHELLNSVESTLLNCSRFMESNFLNRLEECRQTCPCSVEAVDGLLLEWNTLARKHGIAPTTLPSCHKALQNERNGNVEALQLLPASIEQE 545
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: A0A1Z5JGS5_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGS5_FISSO) HSP 1 Score: 93.6 bits (231), Expect = 3.140e-16 Identity = 131/478 (27.41%), Postives = 206/478 (43.10%), Query Frame = 1
Query: 436 LGRASRITRVEVDNLAMV-----DN-VSIKLGRGLVAVTGETGTGKSL-ISSAFSLAAGARVRGADLVGSRGSTAA-------VQLQLELAEGHRASTAE-VLERFGVPLADGGRRLRVNRTVGGKG----SSASVNGCSVKLGALRELMSPLIYTVDAN-AFELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCR---FEGGLGGSADDAS--LLHHWVEELDEFREGEMAFMDRMRSVVESFVD-----------DWGEDMLGPLAEPFLSGTLLSDEDAEEGSRGGVEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIGKIRGLLIDA---EDENVGLSQDLLEGT---HEDLNSLEDLVKSAGEKLE-------RSVESLPV-LPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKEE 1719
L S IT + NLA DN + I G+ A+TGETG+GKSL ++ A + G + A L+G + S A V+L+L L GH + A+ L+ V + G L V +G S +N V L AL L+ VDA+ A S+ + RL +D +P + ++A+ Q +QA +R +E+ + S DD + L++HW+ EL F++ F R+ + +E + DW D G + E F+ D+ L E L A++ AR S+ +S AI K R ++D+ D ++ L + T HE LN++E+ + + + +E R++ESL P +LEEV+ + W LARKHG+ P L + L+ E D V A + LP A +E+
Sbjct: 46 LSDQSYITSIRSQNLAGAQSSRSDNQIVIDFQSGMTAITGETGSGKSLFVARALEVVTGGKGISAALLGGKNSERAKVEEPVVVELELSL-RGHYLNAAKSFLKTIEVDVPSTGLILLRRSLVMQQGRRVKSVCHINNQQVTLKALTAFSRSLVTVVDASTAAAALSKPEARLAIIDSAVSPDLLVEVNEAKR---QYRQARRKREAIERELKKRVLPSSFVQSDDDENVELMNHWIRELGVFQDRVELFRGRVATSIEQMTEVHDAILRFAESDWDNDDEGAMYESFMD-------------------FRDMIVSLD------EQLVAAQN----ARDALAALSSDQSAITAIEKTRSFIMDSLGSGDHGKASTRSLQKATERSHELLNAVENALHACSKFIEDDEKGLIRTIESLRENCPFSLEEVDSLLIDWSSLARKHGIIPSSLPTCHKSLKNERDGNVNAQQLLPAAIAEEQ 490
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: A0A6U6F288_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6F288_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.930e-15 Identity = 133/474 (28.06%), Postives = 206/474 (43.46%), Query Frame = 1
Query: 448 SRITRVEVDNLAMVDN----VSIKLGR--GLVAVTGETGTGKSL-ISSAFSLAAGARVRGA-----DLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVP--LADGGRR----------LRVNRTVG--------GKG---------------SSASVNGCSVKLGALRELMSPLIYTVDANAF-ELFSRADGRLRALDRMFTPAEVALADKARSVVAQLKQA-EARRARLEQRCRFEGGLGGSADDAS-----LLHHWVEELDEFREGEMAFMD----------RMRSVVESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEGSRGGVEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIGKIRGLLIDAEDENVGLSQDLLEGTHEDLNS----LEDLVKSAGEKLERSVESLPVLPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVEL 1665
S I ++ NLA +D+ V++ LG LVAVTGETGTGKSL + A +A G +V + D S A V+++L+L++ H T ++ G+ L + GRR L + RT+ G+G S VNG V L ALR + SPL+ VDA+A S+ RL +D+ + A A +AR Q +Q EA + E + L G D+ + LL HWV+ELDEF D ++S+++S W E+ L + L G + + + + VE LS L S V + +E AR + + E+ + + G ++ +L AE+ + +LL L+S +ED + KL++ SL +++E+++ W LARKH V P L +R EL
Sbjct: 113 SCIVSIKSRNLAGLDHGEGSVAVDLGSCPSLVAVTGETGTGKSLLVHKALEVAMGGKVSQSIVPSLDTTVGNESNATVEVELKLSQPHLDITRIIMAHHGIDPTLLENGRRSSQKNDTLPRLFLKRTISLQMKPHMQGEGLEKGERIKSPKPRLKSRCEVNGQVVTLKALRAIASPLVTLVDASAAASALSKPTSRLAIIDKGVSTRTKAAAWEAREKYRQARQVREALEMKAESKV-LPASLPGYGDETTKEALDLLTHWVDELDEFERRIQGLQDVCMTATTYTCTVKSLLKS---SWTEESYSNLLD--LRGHIKALDAQIIAAESAVEALSSLSSSDSVV-----------SALERARAFLFDATKSETDSRSDGDLQPVLDSAEN-----AHELLNDVESALSSCVCCIEDRNRGLLAKLQQERGSLR---LSIEDIDAIIADWNSLARKHSVSPFDLPLCHQSMRAEL 561
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: A0A398CC32_9BACL (DNA repair protein RecN n=1 Tax=Cohnella faecalis TaxID=2315694 RepID=A0A398CC32_9BACL) HSP 1 Score: 77.4 bits (189), Expect = 3.040e-11 Identity = 57/153 (37.25%), Postives = 85/153 (55.56%), Query Frame = 1
Query: 454 ITRVEVDNLAMVDNVSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARVRGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLADGGRRLRVNRTVGGKG-SSASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGRLRALDR 909
+ + + NLA+++NVS+ RG +TGETGTGKS++ A +LAAG R AD++ + A ++ +L+ GH EVLER G+ AD L V R + +G SSA +NG +V L LRE+ L+ + + R D L LD+
Sbjct: 2 LRELSIRNLAVIENVSVSFHRGFHVLTGETGTGKSIVIDALALAAGGR-GSADMIRHGEAKADIEAVFDLSAGH--PVWEVLERLGIE-ADSEESLLVRRELISQGKSSARINGQNVTLSMLREVGEHLVNIHGQHEHQSLLRTDRHLEWLDQ 150
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Match: A0A1G9SD23_9PROT (DNA repair protein RecN n=1 Tax=Maricaulis salignorans TaxID=144026 RepID=A0A1G9SD23_9PROT) HSP 1 Score: 69.7 bits (169), Expect = 8.190e-9 Identity = 122/448 (27.23%), Postives = 176/448 (39.29%), Query Frame = 1
Query: 463 VEVDNLAMVDNVSIKLGRGLVAVTGETGTGKSLISSAFSLAAGARV-RGADLVGSRGSTAAVQLQLELAEGHRASTAEVLERFGVPLADGGRRLRVNRTVGGKGSS-ASVNGCSVKLGALRELMSPLIYTVDANAFELFSRADGR--------LRALDRMFTPAEVALADKARSVVAQLKQAEARRARLEQRCRFEGGLGGSADDASLLHHWVEELDEF--REGEMAFMDRMRSVVESFVDDWGEDMLGPLAEPFLSGTLLSDEDAEEGSRGGVEGLSDLWPRLSRVHEGMEDLEASRTKVELARQLAVEQSNPESIAHAIGKIRGLLIDAEDENVGLSQDLLEGTHEDLNSLEDLVKSAGEKLERSVESLPVLPITLEEVEERTVKWRDLARKHGVPPERLGSMQAQLRVELDELVVAAEALPLAREKEERWRAAAEEAAGELSAVR 1770
+ + N+ ++D++ RGL A+TGETG GKS++ A LAAG R RG LV + A+ + +LA GH A VLE G+ + + G L + R + G S A +N +G LR L L+ E+ + DGR LD A+ L D R A + A R L++ R S ++ L H + E+D+ R GE + R + +A G L +DA G GG+EG RL+ G+E + IG G DA E AG+ L + + V P LE VEER R LARKH V E L ++Q + +LD + A E + A + + A +AAG L+ R
Sbjct: 5 LSIRNVVLIDSLDAGFDRGLCALTGETGAGKSILLGALGLAAGERAERG--LVRAGTDEASATAEFDLAPGHAAWA--VLEEAGL-VVEPGEALILRRRLAEDGRSRAHINDQPASIGLLRSLGDVLV--------EVHGQHDGRGLLDPKTHRGQLDIYAGNAQ--LRDACRKAWATVSTA---RNSLDELVRAHSA---STEEQDFLRHALAEIDKMQPRPGEEEALAEERQFL--------------MAAERALGDLQEAQDALAGDGGGLEG------RLNTAVRGLE-----------------------RVRDQIGSAGG---DAXXXXXXXXXXXXXALIE--------FSEAGDALSDAARAFEVEPGRLESVEERLFALRALARKHEVAIEELPALQTRFAEQLDAIENAGERIAEAEKSVQAAEALYRDAAGALTRSR 377 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10345.561.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10345.561.1 >prot_Ecto-sp8_S_contig10345.561.1 ID=prot_Ecto-sp8_S_contig10345.561.1|Name=mRNA_Ecto-sp8_S_contig10345.561.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=592bp MARAGVVLVLAGLAWPHDNLPFALGARNTPPYGRCRRRRETSSTSSFVPSback to top mRNA from alignment at Ecto-sp8_S_contig10345:1180..6870+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10345.561.1 ID=mRNA_Ecto-sp8_S_contig10345.561.1|Name=mRNA_Ecto-sp8_S_contig10345.561.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5691bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10345:1180..6870+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10345:1180..6870+ >mRNA_Ecto-sp8_S_contig10345.561.1 ID=mRNA_Ecto-sp8_S_contig10345.561.1|Name=mRNA_Ecto-sp8_S_contig10345.561.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1776bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10345:1180..6870+ (Ectocarpus species8 EcLAC_412)back to top |