mRNA_Ecto-sp8_S_contig10309.509.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: D8LRR6_ECTSI (DUF4149 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR6_ECTSI) HSP 1 Score: 135 bits (341), Expect = 3.560e-38 Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVIPI 213
TLLNLVLLEPKSTSIML+RYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVIPI
Sbjct: 183 TLLNLVLLEPKSTSIMLERYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVIPI 253
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: B8BU99_THAPS (DUF4149 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BU99_THAPS) HSP 1 Score: 80.5 bits (197), Expect = 1.420e-17 Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELAS 201
TLLNL+ LEP ST +M RY LEDD K+DSDEY +L K+FG +HGMSS ANL ALIG V+ LAS
Sbjct: 82 TLLNLLYLEPTSTQVMFDRYDLEDDGKRDSDEYGKLAKSFGAYHGMSSLANLVALIGGIVHGVRLAS 148
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: A0A7S3RBJ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBJ6_9SPIT) HSP 1 Score: 75.5 bits (184), Expect = 3.110e-15 Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWEL 195
TLLNL LEP+ST +M RY LE++ K++SDEYK K FG HGMSS ANLGALIG ++W L
Sbjct: 124 TLLNLFYLEPQSTKVMFTRYDLENEGKQESDEYKVAAKKFGPLHGMSSLANLGALIGVIAHSWWL 188
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: A0A7S0FP75_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FP75_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.690e-14 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLEDDKK-KDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVI 207
TL+NL LEP ST +M RY+LE+ + KDSDEY++L +FGKFHGMSS NL AL G+ +A+ LAS +
Sbjct: 35 TLINLFYLEPTSTKVMFDRYELEEKEGGKDSDEYRKLAASFGKFHGMSSLTNLVALCGAVAHAFFLASAL 104
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: A0A7S2ULJ3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULJ3_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.420e-12 Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLED-DKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVI 207
TLLNL +LEPKST +M KRY+LED KDS+ YKEL TFGK HGMSS +NL L + + + +AS +
Sbjct: 196 TLLNLFVLEPKSTKVMFKRYELEDMPGGKDSEGYKELASTFGKLHGMSSLSNLIGLCAAVAHGFYIASAL 265
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: A0A7S3L6U9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6U9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.450e-12 Identity = 41/67 (61.19%), Postives = 48/67 (71.64%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLED-DKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELA 198
TL+N LLEP STS M++RY+LED D KD+DEYK L +FGKFHGMSS NL AL G +A LA
Sbjct: 185 TLVNQFLLEPMSTSNMMRRYELEDQDGGKDTDEYKTLKASFGKFHGMSSLTNLIALCGGVAHAVYLA 251
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: A0A7S1D7W6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7W6_CYCTE) HSP 1 Score: 66.6 bits (161), Expect = 2.160e-11 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLE---DDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELAS 201
TLLN + LEP ST++M RY++E D + K+S EYK+L FGK+HGMSS ANL AL +FV+ + +AS
Sbjct: 204 TLLNQLWLEPTSTTVMFSRYEIENSDDPQAKESAEYKKLASDFGKYHGMSSLANLVALCAAFVHGFYIAS 273
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: A0A813DI93_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DI93_POLGL) HSP 1 Score: 52.4 bits (124), Expect = 3.190e-6 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELAS 201
TL N++ LEP++TS+M +RY+ E+ + + K+L FGK HGMSS ANL AL+G + LA+
Sbjct: 190 TLANMLYLEPQATSVMEQRYERENQGLTNPEVDKDLKAKFGKLHGMSSLANLVALVGLVAHGSVLAA 256
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: A0A813DTM6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DTM6_POLGL) HSP 1 Score: 52.4 bits (124), Expect = 3.770e-6 Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELAS 201
TL N++ LEP++TS+M +RY+ E+ + + K+L FGK HGMSS ANL AL+G + LA+
Sbjct: 277 TLANMLYLEPQATSVMEQRYERENQGLTNPEVDKDLKAKFGKLHGMSSLANLVALVGLVAHGSVLAA 343
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Match: A0A7S2C2Q3_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2C2Q3_9DINO) HSP 1 Score: 51.2 bits (121), Expect = 4.200e-6 Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 1 TLLNLVLLEPKSTSIMLKRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALI 168
TL+NL+ LEP++T +M +RY+ E KD K+L FGK HGMSS ANL AL+
Sbjct: 103 TLMNLLYLEPEATRVMFERYEREKQGLKDPAIDKQLRADFGKLHGMSSLANLLALV 158 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10309.509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10309.509.1 >prot_Ecto-sp8_S_contig10309.509.1 ID=prot_Ecto-sp8_S_contig10309.509.1|Name=mRNA_Ecto-sp8_S_contig10309.509.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=72bp TLLNLVLLEPKSTSIMLKRYKLEDDKKKDSDEYKELGKTFGKFHGMSSFAback to top mRNA from alignment at Ecto-sp8_S_contig10309:5841..6897- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10309.509.1 ID=mRNA_Ecto-sp8_S_contig10309.509.1|Name=mRNA_Ecto-sp8_S_contig10309.509.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1057bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10309:5841..6897- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10309:5841..6897- >mRNA_Ecto-sp8_S_contig10309.509.1 ID=mRNA_Ecto-sp8_S_contig10309.509.1|Name=mRNA_Ecto-sp8_S_contig10309.509.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=216bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10309:5841..6897- (Ectocarpus species8 EcLAC_412)back to top |