mRNA_Ecto-sp8_S_contig10308.506.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: D7G6J8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J8_ECTSI) HSP 1 Score: 107 bits (266), Expect = 1.890e-23 Identity = 78/183 (42.62%), Postives = 105/183 (57.38%), Query Frame = 1
Query: 79 VLEDTYGGRSHMPALHSAAQHGHARFAAALIAAGAPVEHR-HYSDTALNVAVREGHEE---VVRELLSAVADIN-------TENSYVYSLLNIAVCTNNERMMDVLLAAGEDMGEDGTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLLRHNASV 594
V E G S +P L AA G AALI AGAP+E + L AV +E +VR+LL+ AD+N T+ + S L +A N E MMD+LLAAG D+G + D L PLHAAA C L++L+ GA+V+ +DS+GR+ALH+AC HN E AV++LL++NA V
Sbjct: 206 VQEVDDAGYSSLPILSIAAFLGGRSMVAALIKAGAPLEFQSRRGRPPLATAVASDRDEALGIVRDLLAVGADVNNVGHNDQTKGPFGNSPLCLAAAKNKEGMMDLLLAAGADLGNERVDIL-----PLHAAAHHHSCGALQRLISAGASVHQLDSRGRSALHVACLHNCEGAVKLLLQYNARV 383
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: D7G6J7_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J7_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 7.830e-15 Identity = 56/142 (39.44%), Postives = 80/142 (56.34%), Query Frame = 1
Query: 166 LIAAGAPVEHR-HYSDTALNVAVR-EGHEEVVRELLSAVADINTENSYVYSLLNIAVCTNNERMMDVLLAAGEDMGEDGTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLLRHN 585
LI G P+E R + L AV +G + R+LL A AD+N N+ V E MMD+L AAG D+G++ PLHAAA C +++L+ GA+V+ ++S GR+ALH+AC H E AV++LLR+N
Sbjct: 49 LIKVGVPLECRPRLGNPPLATAVASDGALGIARDLLDAGADVNKSNA------GYGVLPYMEDMMDLLPAAGADLGKE-----RAATSPLHAAAQCDCCGAIQRLISAGASVHQLNSGGRSALHMACLHKCEGAVKLLLRYN 179
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: D7FVJ3_ECTSI (Ankyrin repeat-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ3_ECTSI) HSP 1 Score: 82.0 bits (201), Expect = 8.210e-15 Identity = 42/66 (63.64%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 394 GTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLLRHNAS 591
G D+ P PLH AA KGFCRPLE+LL GA V+ VD GR+ALH+AC +N E AVEVLLRH+AS
Sbjct: 164 GKDREECP--PLHVAAKKGFCRPLERLLLAGAKVDCVDRVGRSALHVACFYNREGAVEVLLRHHAS 227
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: A0A8C8JN16_ONCTS (Ankyrin repeat domain 16 n=2 Tax=Oncorhynchus tshawytscha TaxID=74940 RepID=A0A8C8JN16_ONCTS) HSP 1 Score: 67.0 bits (162), Expect = 1.200e-9 Identity = 58/196 (29.59%), Postives = 89/196 (45.41%), Query Frame = 1
Query: 4 WISLEVVASAGNPQVFHRLLDASPSVLEDTYGGRSHMPALHSAAQHGHARFAAALI--AAGAPVEHRHYSDTALNVAVREGHEEVVRELLSAVADINTENSYV--YSLLNIAVCTNNERMMDVLLAAGEDMGEDGTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLLR 579
W S + G+P V LL A+P V ++ LH+AA HG + L+ P T AVR GH V + LL T + S+ ++AV E + ++ G D+ + TD + LH AA +G ++ LL +GA+++ KGRTALH+AC+ H +AV +L+
Sbjct: 144 WNSFHIACRKGDPAVIQHLLLANPEVWRTE--SKTLRTPLHTAAMHGCEEVVSILVQRCGYVPDVRDSCGVTPFMDAVRNGHISVAKLLLEKHQASPTAADILGAQSVHHVAVTAQEEALEFLVRDLGVDVNQTATD---MQLTSLHYAAKEGHTGTIKALLTLGADLHVRHKKGRTALHVACTGQHAEAVRTILQ 334
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: A0A8J6KED6_ELECQ (Uncharacterized protein n=3 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6KED6_ELECQ) HSP 1 Score: 63.5 bits (153), Expect = 1.910e-8 Identity = 60/202 (29.70%), Postives = 89/202 (44.06%), Query Frame = 1
Query: 4 WISLEVVASAGNPQVFHRLLDASPSVLEDTYGGRSHMPALHSAAQHGHARFAAALIAAGAPVEHRHYSD--------TALNVAVREGHEEVVRELLSA--VADINTENSYVYSLLNIAVCTNNERMMDVLLAAGEDMGEDGTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLLR 579
W S + G+P V LLDA P + T P LH+AA HG L+ E +Y T AV+ GH ++ L+ V + +L AV ++ + ++ G D+ T ++ P+H AA +G L LL +GA++N DSKGR+ALH+ACS H V+ LL+
Sbjct: 143 WNSFHIACREGDPAVISYLLDAFPDIWM-TESNIKRTP-LHTAAMHGCHDVVQILL------ERCNYEADCKDSCGVTPFMDAVQNGHLQIAELLIEKKKVCCRAVDRMGAQALHRAAVTGQDKALQYLVSHLGVDVNGKAT---SMQLSPVHYAAKEGHVGSLSTLLSLGADLNSRDSKGRSALHMACSGQHAGCVDFLLK 333
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: UPI001131D8F2 (ankyrin repeat domain-containing protein 16-like n=1 Tax=Salmo trutta TaxID=8032 RepID=UPI001131D8F2) HSP 1 Score: 61.2 bits (147), Expect = 6.570e-8 Identity = 57/196 (29.08%), Postives = 87/196 (44.39%), Query Frame = 1
Query: 4 WISLEVVASAGNPQVFHRLLDASPSVLEDTYGGRSHMPALHSAAQHGHARFAAALI--AAGAPVEHRHYSDTALNVAVREGHEEVVRELLSAVADINTENSYVYS--LLNIAVCTNNERMMDVLLAAGEDMGEDGTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLLR 579
W S + G+P V LL A+ V T + P LH+AA HG + L+ P T VR GH V + LL T + + + ++ V E + ++ G DM + TD + LH AA +G ++ LL +G +++ D KG+TALH+AC+ H +AV LL+
Sbjct: 23 WNSFHISCRKGDPAVIQHLLLANLEVWR-TESKKRRTP-LHTAAMHGCEEVVSILVQRCGYVPDGRDSCGVTPFMDTVRNGHISVAKLLLEKHQASPTAADILGAQPVHHVVVTAQEEALEFLVRDLGVDMNQTATD---MQLTSLHYAAKEGHTGTIKALLTLGTDLHVRDKKGKTALHMACTGQHAEAVRTLLQ 213
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: A0A7S4H8T1_GUITH (Hypothetical protein n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4H8T1_GUITH) HSP 1 Score: 62.4 bits (150), Expect = 7.070e-8 Identity = 57/156 (36.54%), Postives = 79/156 (50.64%), Query Frame = 1
Query: 121 LHSAAQHGHARFAAALIAAGAPVEHRHYS-DTALNVAVREGHEEVVRELLSAVADINTENSYVYSLLNIAVCTNNERMMDVLL-AAGEDMGEDGTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLLRH 582
L S A HG LI+ G V +Y TAL++A EGHE+VV+ LLS AD+N + + L A+ + + D+L A G+ +G D +L AA KG L L+R AN + D+ RTALHLA S+ ++ LLRH
Sbjct: 2598 LCSHAFHGKLADIERLISNGINVNESNYDLRTALHLAACEGHEDVVKYLLSKSADVNCRDRLGRTPLCDALVHCHTNIQDMLREAGGQLLGMDIAVELC-------TAAAKGDVSQLRALIRNSANPDAADADRRTALHLAASNGETTVLDYLLRH 2746
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: UPI0018CE8E5F (L-asparaginase-like isoform X1 n=4 Tax=Teleopsis dalmanni TaxID=139649 RepID=UPI0018CE8E5F) HSP 1 Score: 62.0 bits (149), Expect = 7.990e-8 Identity = 41/122 (33.61%), Postives = 63/122 (51.64%), Query Frame = 1
Query: 211 TALNVAVREGHEEVVRELLSAVADINTENSYVYSLLNIAVCTNNERMMDVLLAAGEDMGEDGTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLL 576
TAL++A G+ E+V LL ++ + Y + L+ A+ T+N ++ +L+ G + T + L AAA +G + L+ GA++ D GRTALHLA H HED V LL
Sbjct: 467 TALHLACHNGNAEIVNYLLLNGVSVHIRDRYDRTPLHEAITTDNHEIIQLLINCGAHL----TGSSRGIGEKLCAAAARGSMKRLKSYQLAGADLTQPDPSGRTALHLAALHGHEDIVRFLL 584
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: A0A673VTM4_SALTR (Ankyrin repeat domain-containing protein 16-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673VTM4_SALTR) HSP 1 Score: 61.2 bits (147), Expect = 1.060e-7 Identity = 57/196 (29.08%), Postives = 87/196 (44.39%), Query Frame = 1
Query: 4 WISLEVVASAGNPQVFHRLLDASPSVLEDTYGGRSHMPALHSAAQHGHARFAAALI--AAGAPVEHRHYSDTALNVAVREGHEEVVRELLSAVADINTENSYVYS--LLNIAVCTNNERMMDVLLAAGEDMGEDGTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLLR 579
W S + G+P V LL A+ V T + P LH+AA HG + L+ P T VR GH V + LL T + + + ++ V E + ++ G DM + TD + LH AA +G ++ LL +G +++ D KG+TALH+AC+ H +AV LL+
Sbjct: 101 WNSFHISCRKGDPAVIQHLLLANLEVWR-TESKKRRTP-LHTAAMHGCEEVVSILVQRCGYVPDGRDSCGVTPFMDTVRNGHISVAKLLLEKHQASPTAADILGAQPVHHVVVTAQEEALEFLVRDLGVDMNQTATD---MQLTSLHYAAKEGHTGTIKALLTLGTDLHVRDKKGKTALHMACTGQHAEAVRTLLQ 291
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Match: A0A7S0E7J3_9CRYP (Hypothetical protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E7J3_9CRYP) HSP 1 Score: 61.2 bits (147), Expect = 1.750e-7 Identity = 58/165 (35.15%), Postives = 81/165 (49.09%), Query Frame = 1
Query: 94 YGGRSHMPALHSAAQHGHARFAAALIAAGAPVEHRHYS-DTALNVAVREGHEEVVRELLSAVADINTENSYVYSLLNIAVCTNNERMMDVLL-AAGEDMGEDGTDKLNLPRQPLHAAAMKGFCRPLEKLLRVGANVNWVDSKGRTALHLACSHNHEDAVEVLLRH 582
+ GR L + A HG LI+ G V +Y TAL++A EGHEEVV+ LL+ AD+N + + L A+ + + D+L A G+ +G D +L AA KG L L+R AN + D RTALHLA S+ ++ LLRH
Sbjct: 2326 FPGRDAGVLLCNHAFHGKLEDIERLISNGINVNEANYDLRTALHLAACEGHEEVVKYLLTKSADVNCRDRLGRTPLCDALVHCHTNIQDILREAGGQLLGMDIAVELC-------TAAAKGDVAQLRALIRNRANPDAADGDRRTALHLASSNGETRVLDYLLRH 2483 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10308.506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10308.506.1 >prot_Ecto-sp8_S_contig10308.506.1 ID=prot_Ecto-sp8_S_contig10308.506.1|Name=mRNA_Ecto-sp8_S_contig10308.506.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=198bp MWISLEVVASAGNPQVFHRLLDASPSVLEDTYGGRSHMPALHSAAQHGHAback to top mRNA from alignment at Ecto-sp8_S_contig10308:4062..5078- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10308.506.1 ID=mRNA_Ecto-sp8_S_contig10308.506.1|Name=mRNA_Ecto-sp8_S_contig10308.506.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1017bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10308:4062..5078- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10308:4062..5078- >mRNA_Ecto-sp8_S_contig10308.506.1 ID=mRNA_Ecto-sp8_S_contig10308.506.1|Name=mRNA_Ecto-sp8_S_contig10308.506.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=594bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10308:4062..5078- (Ectocarpus species8 EcLAC_412)back to top |