mRNA_Ecto-sp8_S_contig103024.498.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: D7FNG8_ECTSI (Enoyl-CoA hydratase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG8_ECTSI) HSP 1 Score: 125 bits (313), Expect = 3.600e-34 Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 1
Query: 28 MMVQLADAVNELEKWDRGVALVVHGMGGNFCAGADLSLAREHLRTGPDGRSMCALMSDTLTRLRR 222
MMVQL+DAV+ELE+WDRGVALVVHGMGGNFCAGADLSLAREHLRTG DGRSMCALMSDTLTRLRR
Sbjct: 1 MMVQLSDAVDELEQWDRGVALVVHGMGGNFCAGADLSLAREHLRTGADGRSMCALMSDTLTRLRR 65
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: A0A835Z365_9STRA (ClpP/crotonase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z365_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.620e-18 Identity = 47/70 (67.14%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 13 ALSGTMMVQLADAVNELEKWDRGVALVVHGMGGN-FCAGADLSLAREHLRTGPDGRSMCALMSDTLTRLR 219
ALSG MMV+LADAV +E+W RGVAL++ G FCAGADL+LAR HL T DGR MCALM+DTL RLR
Sbjct: 50 ALSGRMMVELADAVAAVERWHRGVALILTAEGDRAFCAGADLALARNHLTTPWDGRLMCALMTDTLHRLR 119
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: A0A7S4B265_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B265_CHRCT) HSP 1 Score: 80.9 bits (198), Expect = 1.530e-16 Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 13 ALSGTMMVQLADAVNELEKWDRGVALVVHGMGGNFCAGADLSLAREHLRTGPDGRSMCALMSDTLTRL 216
AL GTMM+QLADAV+ELE W +GVALVV G G FCAGADL LA++ + T G+ M LMS+TL R+
Sbjct: 66 ALCGTMMIQLADAVHELESWKQGVALVVTGAGRAFCAGADLHLAQKVINTPEQGQLMSELMSETLDRI 133
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: UPI0009E4858E (ethylmalonyl-CoA decarboxylase-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E4858E) HSP 1 Score: 76.6 bits (187), Expect = 6.090e-15 Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 13 ALSGTMMVQLADAVNELEKWDRGVALVVHGMGGNFCAGADLSLAREHLRTGPDGRSMCALMSDTLTRL 216
AL+G MMV+LA+AV+ELE+W+ G AL++HG G+FC+GADLS+ + + T +G MCA M TL+RL
Sbjct: 78 ALTGYMMVRLAEAVDELEQWEHGTALILHGSEGSFCSGADLSIVKT-INTPREGNLMCAFMQRTLSRL 144
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: B3RPF8_TRIAD (Uncharacterized protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RPF8_TRIAD) HSP 1 Score: 75.9 bits (185), Expect = 1.210e-14 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1
Query: 1 KISTALSGTMMVQLADAVNELEKWDRGVALVVHGMGGNFCAGADLSLAREHLRTGPDGRSMCALMSDTLTRLRR 222
+I ALSG+MMVQL DA+N+LE+W G +++ G FC+GADL+LA++ + G +MC LM TLTRL+R
Sbjct: 78 RIRNALSGSMMVQLRDAINQLEEWKEGKGVILIGASSTFCSGADLNLAKQ-FNSPEHGEAMCELMQTTLTRLKR 150
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: A0A6P4ZPQ6_BRABE (ethylmalonyl-CoA decarboxylase-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZPQ6_BRABE) HSP 1 Score: 75.1 bits (183), Expect = 2.270e-14 Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 1
Query: 13 ALSGTMMVQLADAVNELEKWDRGVALVVHGMGGNFCAGADLSLAREHLRTGPDGRSMCALMSDTLTRLRR 222
A++G MM+QLAD VN+L++W G AL+VHG G FC GADL++ R L + GR MCA M TLT L R
Sbjct: 77 AVTGNMMLQLADIVNDLKEWKGGKALIVHGKGHTFCTGADLNMVRNMLDS-KHGREMCAFMHKTLTELHR 145
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: UPI000C03BA26 (ethylmalonyl-CoA decarboxylase-like n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03BA26) HSP 1 Score: 72.4 bits (176), Expect = 3.190e-14 Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 13 ALSGTMMVQLADAVNELEKWDRGVALVVHGMGGNFCAGADLSLAREHLRTGPDGRSMCALMSDTLTRLRR 222
ALSG MMV+LA+ V+ELE+W G A+V+HG G+FC+GADLS+ + + T +G MCA M TL+RL R
Sbjct: 74 ALSGYMMVKLAEVVDELEQWLHGKAVVLHGSEGSFCSGADLSVIKA-INTPEEGTLMCAFMQRTLSRLGR 142
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: UPI001425B85F (ethylmalonyl-CoA decarboxylase-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425B85F) HSP 1 Score: 74.7 bits (182), Expect = 3.840e-14 Identity = 41/76 (53.95%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 1 KISTALSGTMMVQLADAVNELEKWDRGVALVVHGM--GGNFCAGADLSLAREHLRTGPDGRSMCALMSDTLTRLRR 222
K + ALSG+MMV+LADA++ELE W G A+V+ G G NFCAGADL+ +E L+T G MC M +TL+RL+R
Sbjct: 95 KNANALSGSMMVELADAISELENWSTGKAVVLRGSPEGKNFCAGADLTSMQE-LKTAQAGTMMCLFMQNTLSRLQR 169
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: UPI001CF45398 (ethylmalonyl-CoA decarboxylase-like n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF45398) HSP 1 Score: 74.3 bits (181), Expect = 4.220e-14 Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 13 ALSGTMMVQLADAVNELEKWDRGVALVVHGMGGNFCAGADLSLAREHLRTGPDGRSMCALMSDTLTRLRR 222
AL+G MMV+LA+ V+ELEKW G +V+HGM +FC+GADLS+ + + T +G MCA M TLTRL R
Sbjct: 74 ALTGFMMVRLAECVDELEKWQSGKVVVLHGMERSFCSGADLSIIKA-INTPEEGNLMCAFMQRTLTRLAR 142
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Match: A0A3M6TWR1_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TWR1_POCDA) HSP 1 Score: 73.6 bits (179), Expect = 8.000e-14 Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 1
Query: 13 ALSGTMMVQLADAVNELEKWDRGVALVVHGMGGNFCAGADLSLAREHLRTGPDGRSMCALMSDTLTRLRR 222
AL+G MMV+LA+ V+ELE+W G A+V+HG G+FC+GADLS+ + + T +G+ MCA M TL+RL R
Sbjct: 72 ALTGYMMVRLAEVVDELEQWQHGKAVVLHGSEGSFCSGADLSVIKA-INTPEEGQLMCAFMQRTLSRLGR 140 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig103024.498.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig103024.498.1 >prot_Ecto-sp8_S_contig103024.498.1 ID=prot_Ecto-sp8_S_contig103024.498.1|Name=mRNA_Ecto-sp8_S_contig103024.498.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=66bp MMVQLADAVNELEKWDRGVALVVHGMGGNFCAGADLSLAREHLRTGPDGRback to top mRNA from alignment at Ecto-sp8_S_contig103024:170..394- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig103024.498.1 ID=mRNA_Ecto-sp8_S_contig103024.498.1|Name=mRNA_Ecto-sp8_S_contig103024.498.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=225bp|location=Sequence derived from alignment at Ecto-sp8_S_contig103024:170..394- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig103024:170..394- >mRNA_Ecto-sp8_S_contig103024.498.1 ID=mRNA_Ecto-sp8_S_contig103024.498.1|Name=mRNA_Ecto-sp8_S_contig103024.498.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=198bp|location=Sequence derived from alignment at Ecto-sp8_S_contig103024:170..394- (Ectocarpus species8 EcLAC_412)back to top |