mRNA_Ecto-sp8_S_contig10297.488.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE) HSP 1 Score: 475 bits (1223), Expect = 2.740e-166 Identity = 238/252 (94.44%), Postives = 246/252 (97.62%), Query Frame = 1
Query: 307 ILLLITIWRVADARTFEASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVNAGEDGKVVYVQHSWVTLEGFSVDGKISDDDKAESYVDKCVFVEGPSTSGDERLEGFVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
+LLLITI ++ADARTF+ASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGR ALVNAG+DGKVVYVQHSWVTLEGFSVDGKISDDD+AESYVDKCVFVEG STSGDERLEGFVMQDV VQNCGDECVRLKSF+VGAVISDNVIQDCGVRDFVYGN GKNGEGIYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVD+KEGSTGTIVE NTCSGQLDEDSGCFGSRGDGNVFR
Sbjct: 1 MLLLITIRQLADARTFDASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRDALVNAGDDGKVVYVQHSWVTLEGFSVDGKISDDDEAESYVDKCVFVEGTSTSGDERLEGFVMQDVYVQNCGDECVRLKSFIVGAVISDNVIQDCGVRDFVYGNSGKNGEGIYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDIKEGSTGTIVEENTCSGQLDEDSGCFGSRGDGNVFR 252
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: A0A6H5LEX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEX7_9PHAE) HSP 1 Score: 275 bits (704), Expect = 6.340e-86 Identity = 138/256 (53.91%), Postives = 189/256 (73.83%), Query Frame = 1
Query: 301 LLILLLITIWRVADARTFEASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVNAGEDGKVVYVQHSWVTLEGFSVDGKI--SDDDKAESYVDKCVFVEGPSTSGDERLEGFVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
LL+LLL+ A A TF+AS DG + + A+ A AGDTV L DGTY+ A+V+V+GGE G+P+ ++GG GA++ + V + HS++TL+GF+V+GK+ SD D+A S+V+KCV+VEGP + L+GFVM+D+ VQNCG ECVRLK VV A ++ N I +CGV DF++ + KNGEG+Y+GTSSTQW++G D CNDN + GN I+ +GNECVD+KEG++G +VE N CS QLD +SGC+ SRGDGN FR
Sbjct: 25 LLLLLLLLHSPSARAVTFDASADGDGFDLYEAMDLAQAGDTVNLQDGTYDSALVSVRGGEFGSPITVSGGPGAIIKGSYSSRSVLITHSFITLKGFTVEGKVGTSDTDEA-SWVNKCVYVEGPGSQSSAVLDGFVMEDMIVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDFMFNSGDKNGEGVYIGTSSTQWTNGEDTCNDNLVFGNRISTSGNECVDIKEGASGNVVENNICSDQLDAESGCYDSRGDGNTFR 279
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: D7FXR8_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR8_ECTSI) HSP 1 Score: 265 bits (678), Expect = 5.440e-81 Identity = 129/244 (52.87%), Postives = 181/244 (74.18%), Query Frame = 1
Query: 337 ADARTFEASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVNAGEDGKVVYVQHSWVTLEGFSVDGKI--SDDDKAESYVDKCVFVEGPSTSGDERLEGFVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
A A T++AS DG + + A+ A AGDTV L DGTY+ A+V+V+ GE G+P+ ++GG GA++ + V + HS++TL+GF+V+GKI SD D+A S+V+KCV+VEGP + L+GFVM+D+ VQNCG ECVRLK V+ A + N I +CGV D+++ + KNGEG+Y+GTSSTQW++G D CNDN ++GN I+ +GNECVD+KEG++G ++E N CS QLD +SGC+ SRGDGN FR
Sbjct: 37 ARAVTYDASADGDGFDLYEAMDLAQAGDTVNLQDGTYDSALVSVRDGEFGSPITVSGGPGAIIKGSYSSRSVLITHSFITLKGFTVEGKIGTSDTDEA-SWVNKCVYVEGPGSQSSAVLDGFVMEDMIVQNCGGECVRLKDSVINAQVMGNTISNCGVHDYMFNSGDKNGEGVYIGTSSTQWTNGEDTCNDNLVSGNRISTSGNECVDIKEGASGNVIEDNICSEQLDAESGCYDSRGDGNTFR 279
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: D7FXR9_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR9_ECTSI) HSP 1 Score: 260 bits (664), Expect = 6.670e-81 Identity = 125/243 (51.44%), Postives = 176/243 (72.43%), Query Frame = 1
Query: 337 ADARTFEASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVNAGEDGKVVYVQHSWVTLEGFSVDGKI-SDDDKAESYVDKCVFVEGPSTSGDERLEGFVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDGPDECNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
A A T+ S DG + A+ A AGDTV L +GTY+ A+V+++ GE G+P+ + GG GA++ + V++ HS++TL+GFSV+GKI S+D S+V+KCV+VEGP + L+GFVM+D+ VQNCG ECVRLK VV A ++ N I +CGV D+++ ++ KNGEG+Y+GTSSTQW++G D CN N ++ N I+ +GNECVD+KEGS+G ++E N CS QLD +SGC+ SRGDGN FR
Sbjct: 37 AFAVTYNVSADGDGIDLYEAMDLAEAGDTVNLQNGTYDSALVSIRDGEFGSPITVAGGPGAIIKGSSSSRSVFITHSFITLKGFSVEGKIGSNDTDQASWVNKCVYVEGPGANSSAVLDGFVMEDMVVQNCGGECVRLKDSVVNAQVTGNTISNCGVHDYMFNSEDKNGEGVYIGTSSTQWTNGEDTCNGNVVSRNLISTSGNECVDIKEGSSGNVIEDNFCSDQLDAESGCYDSRGDGNTFR 279
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE) HSP 1 Score: 253 bits (647), Expect = 1.450e-76 Identity = 136/265 (51.32%), Postives = 178/265 (67.17%), Query Frame = 1
Query: 340 DARTFEASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVN--AGEDG-----KVVYVQHSWVTLEGFSVDGKISDDDKAESYVDKCVFVEGPST------SGDE---RLEGFVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDG--------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
+A +E SPDG P ++ +AL AGAGD V LADGTY E IVT+ G GNPL+ITGGRGA++N +G+ KVV ++HS+VTLEGF++DG++ D+D ESYVDKC+FVEG + G E L G V+ + +QNCG EC+R+++FV AVI +N I++CG+ DF + DGK GE IY+GTSS QW DG PD N N +TGN + P GNECVD+KEG+T +VE N C Q D +SGC+ SRG+ N FR
Sbjct: 31 NAAMYEVSPDGNPMTLTAALEVAGAGDIVSLADGTYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTLEGFTIDGQLDDEDVEESYVDKCIFVEGQAAPTMLTHQGQEVESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFR 295
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI) HSP 1 Score: 254 bits (650), Expect = 2.700e-75 Identity = 133/264 (50.38%), Postives = 174/264 (65.91%), Query Frame = 1
Query: 343 ARTFEASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVN--AGEDG-----KVVYVQHSWVTLEGFSVDGKISDDDKAESYVDKCVFVEGPSTSGDERLEG---------FVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDG--------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
A T+E SPDG P ++A+AL AGAGDT+ L DG Y E +VT++ G GNPL+I GGR A+VN G+ KVV ++HSWVTL GF++DG+I D D +S+VDKC+FVEG + D +G V+ + +QNCG EC+R+++FV VI DN I+DCG+ D+ Y DGK GE IY+GTSS QW+DG PD CN N +TGN + P GNECVD+KEG+T +VE N C Q D +SGC+ SRG+ N FR
Sbjct: 78 AATYEVSPDGDPMTLAAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLRGFTIDGQIDDADHEDSFVDKCIFVEGQAAPEDVEYDGRTVETALIGTVIDSMKIQNCGMECIRMRNFVTNTVIIDNDIEDCGIYDYRYTFDGKVGEAIYIGTSSNQWADGADGRVTNGPDGCNYNLVTGNKLVPRGNECVDIKEGATMNVVEYNDCEDQRDVESGCYDSRGNENTFR 341
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: D7FZD2_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZD2_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.060e-66 Identity = 111/240 (46.25%), Postives = 165/240 (68.75%), Query Frame = 1
Query: 349 TFEASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVNAGEDG-KVVYVQHSWVTLEGFSVDGKISDDDKAESYVDKCVFVEGPSTSGDERLEGFVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDGPDE-CNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
T++ + DG + +A A+ A AGDTV L DGTY +A+ TV+ GESGNP+ + GG GA++ A + V+V HS++ L+GF+V+G+I + +SYV C++V+GP + L+GFVM++++VQNCG ECVRLK V A I N I +CG+ D+++ + NG+G+ +GTSS +W DG ++ C +N + GN I + NECVDVKEG+ G ++E N C QLD +SGC+ SRG+ N+FR
Sbjct: 2 TYDVTVDGDGFGLAEAMDLAEAGDTVSLQDGTYEQALETVRDGESGNPITVVGGPGAIIKAQNSASRSVFVGHSFIELKGFTVEGQIGTEVTEDSYVLNCIYVQGPGSDSSTFLDGFVMEEMAVQNCGGECVRLKDGVTNAKIFSNTITNCGIHDYMFESGDMNGQGVCIGTSSDEWPDGEEDVCTNNLVAGNVIDTSANECVDVKEGAYGNVIEDNMCYNQLDINSGCYNSRGNDNIFR 241
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: A0A0G1XWI5_9BACT (Beta_helix domain-containing protein n=3 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G1XWI5_9BACT) HSP 1 Score: 189 bits (481), Expect = 2.360e-53 Identity = 105/234 (44.87%), Postives = 145/234 (61.97%), Query Frame = 1
Query: 382 SIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVNAGEDGKVVYVQHSWVTLEGFSVDGKISDDDKAESYVDKCVFVEGPSTSGDER-LEGFVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDGP------DECNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
SI A+ AG G + LADGTY + IV+ + G + NP+ ITG ++V G+ +V+ + HS++TLE F+VDG + D+ + DK ++V+G GD + + G + +S++N G ECVRL+ F I+DN I CG DF+ GKNGEGIY+GT+ Q DG D N N + GNTI GNECVDVKEGS+G +VE N C+GQ D +SG SRG+GN+FR
Sbjct: 79 SIQKAIYLAGPGSAIHLADGTYMQNIVSKRDGTAKNPIRITGSPSSIVQGGKISRVIEINHSFITLENFTVDGLVGSPDEKSGFRDKLIYVQG---KGDGKGVTGLKVLKMSLKNAGGECVRLRYFAQKNEIADNTITGCGAYDFLLDGKGKNGEGIYIGTAPEQTDDGKNPTDERDHSNGNWVHGNTIDTQGNECVDVKEGSSGNLVENNVCTGQKDSESGGLDSRGNGNIFR 309
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: K2BA84_9BACT (Beta_helix domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=K2BA84_9BACT) HSP 1 Score: 188 bits (478), Expect = 8.800e-53 Identity = 102/240 (42.50%), Postives = 149/240 (62.08%), Query Frame = 1
Query: 361 SPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVNAGEDGKVVYVQHSWVTLEGFSVDGKISDDDKAESYVDKCVFVEGPSTSGDERLEGFVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDG------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
SPD +I AL +A AG+T+ LA G Y + V+ + GESG P+ ITG + A+V G + +V + HS++TL GF++DGK + A Y DK +++ G + G + +++++N G ECVRL+ V + I+ N I++CG+ DFV+G+ GKNGEG+Y+GT+ Q DG PDE N+N I N GNECVD+KE + I+E N C+GQ D +SG F SRG+ N+FR
Sbjct: 84 SPDLAFRTIQKALDQATAGETINLAPGVYLQNFVSKRSGESGFPITITGPKEAVVKGGANARVAEINHSYITLSGFTLDGKFDSSNSASGYRDKLLYILGKEPK--VGITGTRIFNMAIRNAGGECVRLRYLVKFSEIAYNTIENCGIHDFVFGDGGKNGEGVYIGTAPEQLKDGKNPTSDPDESNNNWIHHNFFDTQGNECVDIKEAAAKNIIENNRCTGQKDSNSGGFDSRGENNIFR 321
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Match: A0A1F6KJI5_9BACT (Beta_helix domain-containing protein n=1 Tax=Candidatus Levybacteria bacterium RIFCSPLOWO2_12_FULL_39_17 TaxID=1798636 RepID=A0A1F6KJI5_9BACT) HSP 1 Score: 184 bits (466), Expect = 4.970e-52 Identity = 97/229 (42.36%), Postives = 144/229 (62.88%), Query Frame = 1
Query: 394 ALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRGALVNAGEDGKVVYVQHSWVTLEGFSVDGKISDDDKAESYVDKCVFVEGPSTSGDERLEGFVMQDVSVQNCGDECVRLKSFVVGAVISDNVIQDCGVRDFVYGNDGKNGEGIYVGTSSTQWSDG------PDECNDNTITGNTITPNGNECVDVKEGSTGTIVEGNTCSGQLDEDSGCFGSRGDGNVFR 1062
AL +A AG+T+ LA G Y + V+ + GESG P+ ITG + A+V G + +V + HS++TL GF++DGK + A Y DK +++ G + G + +++++N G EC+RL+ V + I+ N I++CG+ DFV+G+ GKNGEG+Y+GT+ Q DG PDE N+N I N GNECVD+KE + I+E N C+GQ D +SG F SRG+ N+FR
Sbjct: 4 ALDQATAGETINLAPGVYLQNFVSKRSGESGFPITITGPKEAVVKGGANARVAEINHSYITLSGFTLDGKFDSSNSASGYRDKLLYILGKEPK--VGITGTRIFNMAIRNAGGECIRLRYLVKFSEIAYNTIENCGIHDFVFGDGGKNGEGVYIGTAPEQLKDGKNPTSDPDESNNNWIHHNFFDTQGNECVDIKEAAAKNIIENNRCTGQKDSNSGGFDSRGENNIFR 230 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10297.488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10297.488.1 >prot_Ecto-sp8_S_contig10297.488.1 ID=prot_Ecto-sp8_S_contig10297.488.1|Name=mRNA_Ecto-sp8_S_contig10297.488.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=355bp IFRQARPTPHAVALRSLLRGREDLYPGEADSAATTSNRLLANISHCCAALback to top mRNA from alignment at Ecto-sp8_S_contig10297:195..5446- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10297.488.1 ID=mRNA_Ecto-sp8_S_contig10297.488.1|Name=mRNA_Ecto-sp8_S_contig10297.488.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5252bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10297:195..5446- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10297:195..5446- >mRNA_Ecto-sp8_S_contig10297.488.1 ID=mRNA_Ecto-sp8_S_contig10297.488.1|Name=mRNA_Ecto-sp8_S_contig10297.488.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1065bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10297:195..5446- (Ectocarpus species8 EcLAC_412)back to top |