mRNA_Ecto-sp8_S_contig102958.486.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig102958.486.1
Unique NamemRNA_Ecto-sp8_S_contig102958.486.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: UPI000C778DB2 (protein archease-like isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C778DB2)

HSP 1 Score: 227 bits (578), Expect = 6.790e-74
Identity = 105/144 (72.92%), Postives = 126/144 (87.50%), Query Frame = 1 
Query:   25 SEPIVAGTDLTVPEVKYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMTEIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDDTE 456
            +E I  GTDLT+PEVK+EYLDHTADVQLHAWG+  KEAFENV ++MFGYMT+I TV+M     +EA GDD+EGLLFH+LDEWL+ FSAE FFIPRK++ITEFD ENF+IKS G+GEEF+IQKHPQGTEVKAITYSAM++YD+ +
Sbjct:   11 AENIPEGTDLTIPEVKFEYLDHTADVQLHAWGNTFKEAFENVGMSMFGYMTDIATVDMTKQVEVEANGDDLEGLLFHYLDEWLYIFSAEDFFIPRKIVITEFDLENFRIKSVGYGEEFNIQKHPQGTEVKAITYSAMKIYDEPD 154
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: UPI000719BBD7 (protein archease-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719BBD7)

HSP 1 Score: 216 bits (550), Expect = 8.950e-70
Identity = 97/135 (71.85%), Postives = 121/135 (89.63%), Query Frame = 1 
Query:   52 LTVPEVKYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMTEIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDDTE 456
            + +P+ KYEYLDHTADVQLH+WGDDLKEAFE  ++AMFGYMT+IE VEM+ T  IEAEG+D+E LLF +++EWL+AFS EPFFIPRK+I+T+FDKENF+IK+ G+GEEFDI KHPQGTEVKAITYS MQ+YD+++
Sbjct:   10 MMIPDQKYEYLDHTADVQLHSWGDDLKEAFEQASMAMFGYMTDIEYVEMRTTAEIEAEGEDIESLLFQYMNEWLYAFSVEPFFIPRKIIVTDFDKENFRIKAIGYGEEFDISKHPQGTEVKAITYSNMQIYDNSD 144
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: A0A1S3K0E0_LINUN (protein archease isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K0E0_LINUN)

HSP 1 Score: 215 bits (547), Expect = 2.740e-69
Identity = 103/131 (78.63%), Postives = 117/131 (89.31%), Query Frame = 1 
Query:   64 EVKYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMTEIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDDTE 456
            EVKYEYLDHTADVQLH+WGDD+KEAFE VA+AMFGYMTEIE VEM D  SIEA+G+D+E LLFHFLDEWLF FSAEPFFI RK+ ITEFD+ENF+IK+ G+GEEFD+ KHPQGTEVKAITYS MQV++  E
Sbjct:   16 EVKYEYLDHTADVQLHSWGDDIKEAFEQVAMAMFGYMTEIEYVEMLDKQSIEAQGEDIESLLFHFLDEWLFLFSAEPFFIARKIKITEFDEENFRIKAVGYGEEFDLDKHPQGTEVKAITYSNMQVHNTEE 146
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: A0A6P4XGL1_BRABE (Protein archease n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XGL1_BRABE)

HSP 1 Score: 213 bits (541), Expect = 1.440e-67
Identity = 102/129 (79.07%), Postives = 112/129 (86.82%), Query Frame = 1 
Query:   70 KYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMTEIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDDTE 456
            KYEYLDHTADVQLH+WG+DLKEAFE  AV MFGYMTEIETVE  DT  IEAEGDDME LL+ FLDEWLFAFSAEPFFI R V I EFD+ENFKIKS G+GE FD+ KHPQGTEVKAITYSAMQ++++ E
Sbjct:   75 KYEYLDHTADVQLHSWGEDLKEAFEQCAVGMFGYMTEIETVEPLDTHEIEAEGDDMESLLYQFLDEWLFAFSAEPFFIARDVKIVEFDRENFKIKSVGYGETFDLSKHPQGTEVKAITYSAMQIHEEVE 203
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: UPI001457FE9A (protein archease-like isoform X1 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001457FE9A)

HSP 1 Score: 209 bits (533), Expect = 3.250e-67
Identity = 100/132 (75.76%), Postives = 114/132 (86.36%), Query Frame = 1 
Query:   58 VPEVKYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMT-EIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDD 450
            +P +KYEYLDHTADVQLHAWGD+LKEAFE VA AMFGYMT +  TVEM +    EAEG+DM+ L+FHFLDEWLF F AEPFFIPRK++ITEFDKENFKIKS G+GEEF I KHPQGTEVKAITYS MQ+++D
Sbjct:   11 IPTIKYEYLDHTADVQLHAWGDNLKEAFEQVATAMFGYMTTDYNTVEMTEVQETEAEGEDMQQLMFHFLDEWLFVFCAEPFFIPRKIVITEFDKENFKIKSKGYGEEFVIGKHPQGTEVKAITYSNMQIHED 142
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: A0A7R9BIF6_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BIF6_9CRUS)

HSP 1 Score: 209 bits (532), Expect = 6.620e-67
Identity = 105/152 (69.08%), Postives = 120/152 (78.95%), Query Frame = 1 
Query:    1 MEKVDPDTSEPIVAGTDLTVPEVKYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMTEIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDDTE 456
            +E+VD D +    A  +  +P  +YEYLDHTADVQLHAWG  L EAFE  AVAMFGYMTEI+TV+M+ T ++EA GDDM+ LL+HFLDEWLF FSAEPFFI RKV I EFD ENFKIK+ GFGEEFD+ KHPQGTEVKAITYS MQV D  E
Sbjct:    2 LEEVDRDENAGGDASINEDIPPCQYEYLDHTADVQLHAWGSSLTEAFEQCAVAMFGYMTEIDTVDMRTTQTVEANGDDMQSLLYHFLDEWLFLFSAEPFFIARKVKILEFDAENFKIKAIGFGEEFDLAKHPQGTEVKAITYSNMQVLDSGE 153
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: UPI000C6CF22F (protein archease-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6CF22F)

HSP 1 Score: 208 bits (530), Expect = 1.470e-66
Identity = 102/134 (76.12%), Postives = 115/134 (85.82%), Query Frame = 1 
Query:   49 DLTVPEVKYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMTEIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDD 450
            DL +P VKYEYLDH ADVQLHAWGDDL EAFE V VAMFGYMTE+E VE+K T  IEAE DDM GLLFH+LDE+LF FSAEPFFIPRK+ I EFD+ENF+IK+ G+GE FD+ KHPQGTEVKAITYS MQV+D+
Sbjct:   21 DLYIPPVKYEYLDHPADVQLHAWGDDLIEAFEQVGVAMFGYMTELEYVEIKMTGDIEAEADDMLGLLFHYLDEFLFLFSAEPFFIPRKIKILEFDRENFRIKARGYGEVFDLDKHPQGTEVKAITYSNMQVHDN 154
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: A0A7I8VEQ2_9ANNE (DgyrCDS3707 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VEQ2_9ANNE)

HSP 1 Score: 206 bits (524), Expect = 8.140e-66
Identity = 98/135 (72.59%), Postives = 116/135 (85.93%), Query Frame = 1 
Query:   52 LTVPEVKYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMTEIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDDTE 456
            +++PE KYEYLDHTADVQLHAWG DLKEAFE  A+AMFGYMT IE+VE+K+   I AEGDDME LLFHFLDE+LF FS EP+FI R V IT+FD ENFKI + G+GEEFD+QKHPQGTEVKAITYSAMQ++++ +
Sbjct:   10 ISIPEKKYEYLDHTADVQLHAWGKDLKEAFEQCAMAMFGYMTTIESVELKEVREIHAEGDDMESLLFHFLDEFLFIFSCEPYFIIRVVEITKFDTENFKIDAVGYGEEFDLQKHPQGTEVKAITYSAMQIHEELD 144
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: A0A210QWK3_MIZYE (Protein archease n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QWK3_MIZYE)

HSP 1 Score: 205 bits (522), Expect = 1.540e-65
Identity = 97/132 (73.48%), Postives = 115/132 (87.12%), Query Frame = 1 
Query:   58 VPEVKYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMT-EIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDD 450
            +PE+KY+YLDHTADVQL++WGD+L EAFE VA AMFGYMT + +TVEM      EAEG+DM+ LLFHFLDEWLF FSA+PFFIPRK++ITEFD+ENFKIKS G+GEEF I KHPQGTEVKAITYS MQ+++D
Sbjct:   11 IPEIKYQYLDHTADVQLYSWGDNLTEAFEQVATAMFGYMTTDYDTVEMTSVEETEAEGEDMQQLLFHFLDEWLFVFSADPFFIPRKIVITEFDRENFKIKSKGYGEEFVIGKHPQGTEVKAITYSNMQIHED 142
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BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Match: C3Y972_BRAFL (Protein archease n=2 Tax=Branchiostoma TaxID=7737 RepID=C3Y972_BRAFL)

HSP 1 Score: 206 bits (523), Expect = 1.600e-65
Identity = 97/129 (75.19%), Postives = 110/129 (85.27%), Query Frame = 1 
Query:   70 KYEYLDHTADVQLHAWGDDLKEAFENVAVAMFGYMTEIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFFIPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDDTE 456
            KYEYLDHTADVQLH+WG DLKEAFE  AV MFGYMTEIETVE  DT+  EA+ DDME LL+ FLDEWLFAFSAEPFFI R V I EFD+ENF+IKS G+GE FD+ KHPQGTEVKAITYSAMQ++++ +
Sbjct:   26 KYEYLDHTADVQLHSWGSDLKEAFEQCAVGMFGYMTEIETVEPLDTYETEAQADDMENLLYQFLDEWLFAFSAEPFFIARDVKIVEFDRENFRIKSVGYGETFDLSKHPQGTEVKAITYSAMQIHEEVD 154
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102958.486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000C778DB26.790e-7472.92protein archease-like isoform X1 n=2 Tax=Eurytemor... [more]
UPI000719BBD78.950e-7071.85protein archease-like n=1 Tax=Priapulus caudatus T... [more]
A0A1S3K0E0_LINUN2.740e-6978.63protein archease isoform X1 n=1 Tax=Lingula unguis... [more]
A0A6P4XGL1_BRABE1.440e-6779.07Protein archease n=1 Tax=Branchiostoma belcheri Ta... [more]
UPI001457FE9A3.250e-6775.76protein archease-like isoform X1 n=1 Tax=Pecten ma... [more]
A0A7R9BIF6_9CRUS6.620e-6769.08Hypothetical protein n=1 Tax=Notodromas monacha Ta... [more]
UPI000C6CF22F1.470e-6676.12protein archease-like n=1 Tax=Centruroides sculptu... [more]
A0A7I8VEQ2_9ANNE8.140e-6672.59DgyrCDS3707 n=1 Tax=Dimorphilus gyrociliatus TaxID... [more]
A0A210QWK3_MIZYE1.540e-6573.48Protein archease n=1 Tax=Mizuhopecten yessoensis T... [more]
C3Y972_BRAFL1.600e-6575.19Protein archease n=2 Tax=Branchiostoma TaxID=7737 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102958contigEcto-sp8_S_contig102958:1..456 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop0
Start1
Seed ortholog score209.1
Seed ortholog evalue1.4e-51
Seed eggNOG ortholog7739.XP_002607118.1
Preferred nameZBTB8OS
Model size456
Hectar predicted targeting categoryother localisation
GOsGO:0000394,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0010720,GO:0010975,GO:0010976,GO:0016070,GO:0022008,GO:0030154,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046483,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048679,GO:0048680,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0060284,GO:0065007,GO:0070013,GO:0070570,GO:0070572,GO:0071704,GO:0072669,GO:0080134,GO:0080135,GO:0090304,GO:0120035,GO:1901360,GO:1903034,GO:1903036,GO:2000026
Exons1
EggNOG free text desc.tRNA splicing, via endonucleolytic cleavage and ligation
EggNOG OGs39U2I@33154,3BD8T@33208,3CWE8@33213,482Z7@7711,COG1371@1,KOG4528@2759
Cds size456
COG Functional cat.S
Best tax levelChordata
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143128.27003-CDS-Ecto-sp8_S_contig102958:0..4561681143128.27003-CDS-Ecto-sp8_S_contig102958:0..456Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig102958 1..456 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102958.486.1prot_Ecto-sp8_S_contig102958.486.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig102958 1..456 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig102958.486.1

>prot_Ecto-sp8_S_contig102958.486.1 ID=prot_Ecto-sp8_S_contig102958.486.1|Name=mRNA_Ecto-sp8_S_contig102958.486.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=152bp
MEKVDPDTSEPIVAGTDLTVPEVKYEYLDHTADVQLHAWGDDLKEAFENV
AVAMFGYMTEIETVEMKDTFSIEAEGDDMEGLLFHFLDEWLFAFSAEPFF
IPRKVIITEFDKENFKIKSTGFGEEFDIQKHPQGTEVKAITYSAMQVYDD
TE
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mRNA from alignment at Ecto-sp8_S_contig102958:1..456-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig102958.486.1 ID=mRNA_Ecto-sp8_S_contig102958.486.1|Name=mRNA_Ecto-sp8_S_contig102958.486.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=456bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102958:1..456- (Ectocarpus species8 EcLAC_412)
ATGGAAAAAGTTGACCCTGACACTTCTGAGCCCATAGTTGCTGGCACAGA
TCTGACAGTTCCTGAGGTTAAATACGAGTACCTTGATCATACAGCTGATG
TTCAACTTCACGCCTGGGGAGATGACTTGAAAGAAGCATTTGAAAATGTT
GCTGTTGCCATGTTTGGATACATGACTGAGATTGAAACTGTAGAAATGAA
AGACACTTTCAGCATAGAGGCTGAAGGTGATGACATGGAGGGACTGTTGT
TTCACTTCCTTGATGAGTGGCTTTTTGCATTTTCTGCCGAACCATTTTTC
ATCCCTAGAAAAGTGATCATCACAGAGTTTGACAAAGAAAATTTCAAGAT
CAAATCCACGGGTTTTGGAGAAGAGTTTGATATCCAGAAACATCCCCAGG
GGACTGAAGTGAAGGCCATAACTTATTCTGCCATGCAGGTTTATGATGAC
ACAGAG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig102958:1..456-

>mRNA_Ecto-sp8_S_contig102958.486.1 ID=mRNA_Ecto-sp8_S_contig102958.486.1|Name=mRNA_Ecto-sp8_S_contig102958.486.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=456bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102958:1..456- (Ectocarpus species8 EcLAC_412)
ATGGAAAAAGTTGACCCTGACACTTCTGAGCCCATAGTTGCTGGCACAGA
TCTGACAGTTCCTGAGGTTAAATACGAGTACCTTGATCATACAGCTGATG
TTCAACTTCACGCCTGGGGAGATGACTTGAAAGAAGCATTTGAAAATGTT
GCTGTTGCCATGTTTGGATACATGACTGAGATTGAAACTGTAGAAATGAA
AGACACTTTCAGCATAGAGGCTGAAGGTGATGACATGGAGGGACTGTTGT
TTCACTTCCTTGATGAGTGGCTTTTTGCATTTTCTGCCGAACCATTTTTC
ATCCCTAGAAAAGTGATCATCACAGAGTTTGACAAAGAAAATTTCAAGAT
CAAATCCACGGGTTTTGGAGAAGAGTTTGATATCCAGAAACATCCCCAGG
GGACTGAAGTGAAGGCCATAACTTATTCTGCCATGCAGGTTTATGATGAC
ACAGAG
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