mRNA_Ecto-sp8_S_contig10284.473.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: D7G8X7_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8X7_ECTSI) HSP 1 Score: 295 bits (756), Expect = 2.020e-101 Identity = 140/141 (99.29%), Postives = 140/141 (99.29%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFASP 426
ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPF GGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFASP
Sbjct: 8 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFGGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFASP 148
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: A0A835Z9K8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K8_9STRA) HSP 1 Score: 208 bits (530), Expect = 5.530e-67 Identity = 94/140 (67.14%), Postives = 119/140 (85.00%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFAS 423
EL ELRK L+WC P+DD+IM W+AM+VGPD++P++GG F L+IE EYPFKAPKV+F+TRIYHPN++T+ GEIC+DILN+NWGPTLN+++VLNT+RQML EP A++PLE DIARQLAEDK F +TA K+T DFAS
Sbjct: 8 ELTELRKAPLDWCQCGPVDDNIMHWSAMMVGPDNSPYAGGVFQLDIEMSPEYPFKAPKVKFLTRIYHPNIRTEGGEICADILNDNWGPTLNLSHVLNTLRQMLLEPSAESPLEPDIARQLAEDKAQFLKTAAKYTADFAS 147
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: A0A6V1MVK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MVK4_HETAK) HSP 1 Score: 206 bits (523), Expect = 6.440e-66 Identity = 93/140 (66.43%), Postives = 115/140 (82.14%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFAS 423
EL L K L++ P DDIM+W AMLVGP +TP+ GG FNLE++FPAEYPFKAPKV+F+TRIYHPN+KTDSGEIC+D++NENWGPTLN YVL I+Q+L+EP AD+PLEADI RQL ED++AF +TA KWT D+A+
Sbjct: 8 ELQALEKAPLDFVTAGPAGDDIMKWQAMLVGPANTPYEGGVFNLELDFPAEYPFKAPKVKFLTRIYHPNIKTDSGEICADLINENWGPTLNTQYVLTVIKQLLEEPSADSPLEADIGRQLTEDENAFKETAAKWTADYAT 147
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: A0A024U3D9_9STRA (UBC core domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U3D9_9STRA) HSP 1 Score: 202 bits (514), Expect = 1.510e-64 Identity = 86/140 (61.43%), Postives = 116/140 (82.86%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFAS 423
ELAE KN EWC + P+DDD++ W AM+VGP++TP++GG F++++ FPAEYPFKAPKV+F+TR+YHPNVK+ SGEIC+DI+NE+WGPTLNV + L ++QML++P ADNPLE +IA+ L ++D F TA+KWT DFAS
Sbjct: 8 ELAEFNKNSPEWCTVGPVDDDLLHWNAMVVGPENTPYAGGVFSIDLVFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADIINESWGPTLNVLHCLTALKQMLEQPDADNPLEPEIAKLLHGNRDVFNDTARKWTKDFAS 147
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: G4YF85_PHYSP (UBC core domain-containing protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=G4YF85_PHYSP) HSP 1 Score: 202 bits (514), Expect = 1.510e-64 Identity = 87/140 (62.14%), Postives = 115/140 (82.14%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFAS 423
ELAE KN EWC + +DDD+M W AML GP+D+P+SGG FNL+++FP+EYPFKAPKVRF+TR+YHPNVK+ SGEIC+DI+NENWGPTLNV + L I+Q+L++P DNPLE +IA+Q+ E+K F +TA++WT +AS
Sbjct: 8 ELAEFEKNSPEWCTVSAVDDDLMHWNAMLAGPEDSPYSGGVFNLDLQFPSEYPFKAPKVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQILEQPDMDNPLEPEIAKQMHENKADFEKTAQEWTKQYAS 147
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: A0A067CHA9_SAPPC (UBC core domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA9_SAPPC) HSP 1 Score: 202 bits (514), Expect = 1.510e-64 Identity = 85/140 (60.71%), Postives = 117/140 (83.57%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFAS 423
ELAE KN +WC + +DDD++ W AM+VGPD++P++GG F++++ FPAEYPFKAPKV+F+TR+YHPNVK+ SGEIC+D++NENWGPTLNV + L ++Q+L++P DNPLE +IA+QL ++DAF +TAKKWT DFAS
Sbjct: 8 ELAEFNKNSPDWCTVGTVDDDLLHWNAMVVGPDNSPYAGGVFSIDLLFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADVINENWGPTLNVMFCLTALKQILEQPDGDNPLEPEIAKQLQCNRDAFNETAKKWTKDFAS 147
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: A0A2D4CAW9_PYTIN (UBC core domain-containing protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAW9_PYTIN) HSP 1 Score: 200 bits (508), Expect = 1.240e-63 Identity = 84/140 (60.00%), Postives = 114/140 (81.43%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFAS 423
ELAE KN +WC + +DDD+M W AM+ GP+D+P+SGG F+L+++FP EYPFKAPK+RF+T++YHPN+KT SGEIC+DI+NENW PTLNV + L I+Q+L++P DNPLE +IARQL DK+AF QTA++WT +A+
Sbjct: 8 ELAEFEKNSPDWCTVGSVDDDLMHWNAMVAGPEDSPYSGGVFSLDLQFPNEYPFKAPKIRFLTKVYHPNIKTSSGEICADIINENWAPTLNVLHCLQAIKQILEQPDVDNPLEPEIARQLQSDKEAFHQTAQEWTKQYAT 147
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: A0A835YRR6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRR6_9STRA) HSP 1 Score: 199 bits (507), Expect = 1.760e-63 Identity = 90/140 (64.29%), Postives = 114/140 (81.43%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFAS 423
ELAEL+++ L+WC +P +DDI++WTA +VGPD TP+ GG FN+ +EFPAEYPFKAPKV+F TRIYHP+V+T +GEIC+D+L NWGPTLNVT+VLNTIRQML EP ++PLE +I R L EDK AF + A K T +FAS
Sbjct: 8 ELAELKRSPLDWCTCEPQEDDILQWTATIVGPDGTPYEGGIFNISLEFPAEYPFKAPKVKFQTRIYHPHVRTATGEICADVLLNNWGPTLNVTFVLNTIRQMLIEPSTESPLEPEIGRLLIEDKQAFIKNAAKCTAEFAS 147
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: K3W7Y2_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7Y2_GLOUD) HSP 1 Score: 196 bits (498), Expect = 4.130e-62 Identity = 83/140 (59.29%), Postives = 113/140 (80.71%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFAS 423
ELAE KN EWC + +DDD+M W AML GP+++P+SGG F+++++FP EYPFKAP+VRF+TR+YHPNVK+ SGEIC+DI+NENWGPTLNV + L I+Q+L++P DNPLE +IA+QL +++ F TAK+WT +AS
Sbjct: 8 ELAEFEKNSPEWCTVGAVDDDLMHWNAMLAGPENSPYSGGVFSIDLQFPNEYPFKAPRVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQILEQPDVDNPLEPEIAKQLQSNREEFDNTAKEWTKQYAS 147
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Match: A0A397DVW9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DVW9_9STRA) HSP 1 Score: 204 bits (520), Expect = 3.030e-60 Identity = 87/140 (62.14%), Postives = 116/140 (82.86%), Query Frame = 1
Query: 4 ELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQMLQEPHADNPLEADIARQLAEDKDAFTQTAKKWTLDFAS 423
ELAE KN EWC + P+DDD++ W AM+VGP++TP++GG F++++ FPAEYPFKAPKV+F+TR+YHPNVK+ SGEIC+DI+NE+WGPTLNV + L ++QML++P ADNPLE +IA+QL +D F TA+KWT DFAS
Sbjct: 8 ELAEFNKNSPEWCTVGPVDDDLLHWNAMVVGPENTPYAGGVFSIDLVFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADIINESWGPTLNVLHCLTALKQMLEQPDADNPLEPEIAKQLHGSRDVFNDTARKWTKDFAS 147 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10284.473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10284.473.1 >prot_Ecto-sp8_S_contig10284.473.1 ID=prot_Ecto-sp8_S_contig10284.473.1|Name=mRNA_Ecto-sp8_S_contig10284.473.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=143bp QELAELRKNKLEWCDIQPMDDDIMRWTAMLVGPDDTPFSGGCFNLEIEFPback to top mRNA from alignment at Ecto-sp8_S_contig10284:174..2780+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10284.473.1 ID=mRNA_Ecto-sp8_S_contig10284.473.1|Name=mRNA_Ecto-sp8_S_contig10284.473.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2607bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10284:174..2780+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10284:174..2780+ >mRNA_Ecto-sp8_S_contig10284.473.1 ID=mRNA_Ecto-sp8_S_contig10284.473.1|Name=mRNA_Ecto-sp8_S_contig10284.473.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=429bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10284:174..2780+ (Ectocarpus species8 EcLAC_412)back to top |