mRNA_Ecto-sp8_S_contig10280.466.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: D8LNA6_ECTSI (Methionine aminopeptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNA6_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 4.170e-186 Identity = 259/267 (97.00%), Postives = 265/267 (99.25%), Query Frame = 1
Query: 1 MRAPLELADLALHDAFVHDSDVALAAGERKITIMLPLVLLTLSLARGVAHESAFVTPGVMPQGYCNCPSRTADARGSLFMNKGFGVAKKKPPRKKPSRRSGFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVK 801
MR+PLELADLALHDAFVHDSDVALAAGERKITIMLPLVLLTLSLARG+AHESAFVTPGVMPQG+CNCPSRTADARGSLFMNKGFG AKKKPPRKKPSRRSGFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPW+VEVKNEADIAAMRAAGKVAREVLD AGQAVKVGATTD+IDRVCHEAAVERGAYPSPLNYQGFPKSCCTS+NEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVK
Sbjct: 1 MRSPLELADLALHDAFVHDSDVALAAGERKITIMLPLVLLTLSLARGLAHESAFVTPGVMPQGHCNCPSRTADARGSLFMNKGFGAAKKKPPRKKPSRRSGFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWIVEVKNEADIAAMRAAGKVAREVLDLAGQAVKVGATTDEIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSINEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVK 267
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: D8LNA9_ECTSI (Methionine aminopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNA9_ECTSI) HSP 1 Score: 302 bits (773), Expect = 6.050e-98 Identity = 155/214 (72.43%), Postives = 167/214 (78.04%), Query Frame = 1
Query: 211 TADARGS--LFMNKGFGVAKKKPPRKKPSRR---------------SGFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVK 801
T RG+ L KGFG +KK P+K + SGFAYTG LRPG QSP R VPPEIG PDYA DG+PKG +P WV+EVK E DIA MRAAGKVAREVLD AG+AV VGATTDD+DR CHEAA+ERGAYPSPLNY GFPKSCCTS+NEI+CHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVK
Sbjct: 73 TKQIRGARALAAKKGFGGVEKKAPKKTKVAKEVAAKRAAKASAVVSSGFAYTGSLRPGVQSPRRTVPPEIGHPDYAEDGMPKGGNPPPAWVIEVKTEEDIAGMRAAGKVAREVLDLAGKAVMVGATTDDVDRACHEAALERGAYPSPLNYFGFPKSCCTSINEIVCHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVK 286
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: W7UC07_9STRA (Methionine aminopeptidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC07_9STRA) HSP 1 Score: 251 bits (640), Expect = 7.770e-78 Identity = 123/189 (65.08%), Postives = 147/189 (77.78%), Query Frame = 1
Query: 241 NKGFGVAKKKPPRKKPSRRSGFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPD-STVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVKV 804
+KGFG KK ++ F YTG L+PG SP R VP +I RPDYA+DG+PK + P LPW++EVK+ DIAAMRA+G VAREVLD G+ +KVG TTD+ID + H ++RGAYPSPLNYQGFPKSCCTS+NE++CHGIPD ST L+DG IVNVDVTV+YKGYHGDCSE F VG VD+AGK LVKV
Sbjct: 110 SKGFGFGAKKE-----AKGDKFKYTGRLKPGVLSPPRDVPADILRPDYALDGMPKARDPPLPWMIEVKSPEDIAAMRASGLVAREVLDAVGRQIKVGMTTDEIDSIAHGETIKRGAYPSPLNYQGFPKSCCTSLNEVVCHGIPDVSTKLQDGDIVNVDVTVYYKGYHGDCSETFCVGNVDEAGKRLVKV 293
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: A0A835YRW9_9STRA (Methionine aminopeptidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW9_9STRA) HSP 1 Score: 246 bits (627), Expect = 2.790e-77 Identity = 125/190 (65.79%), Postives = 143/190 (75.26%), Query Frame = 1
Query: 235 FMNKGFGVAKKKPPRKKPSRRSGFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVKV 804
MNKGFG K KP +++ F YTG RPG SPTR VPPEI RP+YA G + P PWV+E K+EADIA MRAAG+VAREVLD AG+AV G TTD ID V H V RGAYPSPLNY GFPKSCCTS+NEI+CHGIPDSTVL++G I+N+DVTVF GYHGDCSEMF VGEVD A K+L++V
Sbjct: 1 MMNKGFGF-KAKP------KQASFKYTGTTRPGVLSPTRKVPPEIMRPEYADTGRIITQPPRFPWVIEEKSEADIAGMRAAGRVAREVLDAAGRAVAAGVTTDSIDAVVHAETVARGAYPSPLNYSGFPKSCCTSLNEIVCHGIPDSTVLKEGDILNIDVTVFLNGYHGDCSEMFCVGEVDDAAKELLQV 183
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: A0A6H5KGM2_9PHAE (Methionine aminopeptidase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGM2_9PHAE) HSP 1 Score: 244 bits (622), Expect = 3.640e-77 Identity = 117/135 (86.67%), Postives = 124/135 (91.85%), Query Frame = 1
Query: 397 IPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVK 801
+PKG SP WV+EVK E DIA MRAAGKVAREVLD AG+AVKVG TTDDIDR CHEAA+ERGAYPSPLNY GFPKSCCTS+NEI+CHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLV+
Sbjct: 1 MPKGGSPPPAWVIEVKTEEDIAGMRAAGKVAREVLDLAGKAVKVGVTTDDIDRACHEAALERGAYPSPLNYFGFPKSCCTSINEIVCHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVQ 135
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: A0A4D9D8D0_9STRA (Methionine aminopeptidase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8D0_9STRA) HSP 1 Score: 248 bits (634), Expect = 3.870e-76 Identity = 122/189 (64.55%), Postives = 146/189 (77.25%), Query Frame = 1
Query: 241 NKGFGVAKKKPPRKKPSRRSGFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPD-STVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVKV 804
+KGFG KK ++ F YTG L+PG SP R VP +I RPDYA+DG+PK + P LPW++EVK+ DIAAMRA+G VAREVLD + +KVG TTD+ID + H ++RGAYPSPLNYQGFPKSCCTS+NE++CHGIPD ST L+DG IVNVDVTV+YKGYHGDCSE F VG VD+AGK LVKV
Sbjct: 67 SKGFGFGAKKE-----AKGDKFKYTGRLKPGVLSPPRDVPADILRPDYALDGMPKARDPPLPWMIEVKSPEDIAAMRASGLVAREVLDAVARQIKVGMTTDEIDSIAHGETIKRGAYPSPLNYQGFPKSCCTSLNEVVCHGIPDVSTKLQDGDIVNVDVTVYYKGYHGDCSETFCVGNVDEAGKRLVKV 250
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: A0A7S4AZY3_CHRCT (Methionine aminopeptidase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4AZY3_CHRCT) HSP 1 Score: 244 bits (622), Expect = 9.260e-76 Identity = 132/238 (55.46%), Postives = 153/238 (64.29%), Query Frame = 1
Query: 106 PLVLLTLSLARGVAHESAFVTP-----GVMPQGYCNCPSRTADARGSLFMNKGFGVAKKKPPRKKPSRRSGFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVKV 804
PL+LL L G A A + P G M + P R+ GFG A K F YTG +RPG QSPTR VP I +PDYA DG PK P LPW +EVKNE DI MR AG+VAREVLD A +AV VG TTD ID++ H+ ++RG YPSPLNY GFPKSCCTSVNE+ICHGIPDS L+DG IVN+DVT + GYHGDCS+M LVG+VD+AGK LVKV
Sbjct: 19 PLLLL---LCTGSAAAMAALKPLATGIGAMGLARSSLPLRSRLVHDVFMGGVGFGAAAK----------DTFKYTGSMRPGKQSPTRKVPKTIPKPDYAKDGRPKATGPSLPWQIEVKNEKDIEGMRVAGRVAREVLDLAHRAVAVGVTTDAIDQLVHDETIKRGGYPSPLNYHGFPKSCCTSVNEVICHGIPDSYKLKDGDIVNIDVTCYVGGYHGDCSQMVLVGDVDEAGKQLVKV 243
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: A0A7S0EDD9_9EUKA (Methionine aminopeptidase n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EDD9_9EUKA) HSP 1 Score: 239 bits (610), Expect = 2.000e-74 Identity = 116/189 (61.38%), Postives = 140/189 (74.07%), Query Frame = 1
Query: 253 GVAKKKPPRKKPSRR-----SGFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVKV 804
G+ K PPR P + FAYTG RPG Q+P + +P EI RPDYA DG PK + P+ PW +EVK++ DI MRAAG+VAREVLD AG+ V G TD ID + +++RGAYPSPLNY GFPKSCCTSVNE+ICHGIPDS+VL DG IVN+D+T +Y GYHGDCSE F+VGEVD+AGK LV+V
Sbjct: 11 GLLAKTPPRPVPRATPARMMADFAYTGTTRPGEQTPRKIIPKEIARPDYAADGKPKQRGPLFPWQIEVKSQKDIEGMRAAGRVAREVLDAAGRLVAPGVQTDAIDALVTAESIKRGAYPSPLNYHGFPKSCCTSVNEVICHGIPDSSVLRDGDIVNIDITCYYGGYHGDCSETFMVGEVDEAGKKLVRV 199
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: A0A7S2MMP3_9EUKA (Methionine aminopeptidase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MMP3_9EUKA) HSP 1 Score: 240 bits (612), Expect = 4.810e-74 Identity = 113/167 (67.66%), Postives = 129/167 (77.25%), Query Frame = 1
Query: 304 FAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPDSTVLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVKV 804
F YTG +RPG QSPTR +P I RPDYA DG+PK K P LPW VE+K DI MR AG++AREVLD AG+ V G TTD ID + + ++RGAYPSPLNY FPKSCCTSVNE+ICHGIPDS+VL DG IVN+D+T +Y GYHGDCSE FLVGEVD AGK LVKV
Sbjct: 46 FQYTGSVRPGKQSPTRQIPRSIMRPDYADDGVPKAKGPFLPWQVEIKTAKDIEGMRMAGRIAREVLDAAGRMVAPGVTTDAIDALVTDETIKRGAYPSPLNYHKFPKSCCTSVNEVICHGIPDSSVLRDGDIVNIDITCYYGGYHGDCSETFLVGEVDDAGKQLVKV 212
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Match: A0A7S2BSQ1_9STRA (Methionine aminopeptidase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSQ1_9STRA) HSP 1 Score: 236 bits (603), Expect = 2.340e-73 Identity = 110/169 (65.09%), Postives = 135/169 (79.88%), Query Frame = 1
Query: 301 GFAYTGELRPGTQSPTRPVPPEIGRPDYAVDGIPKGKSPMLPWVVEVKNEADIAAMRAAGKVAREVLDRAGQAVKVGATTDDIDRVCHEAAVERGAYPSPLNYQGFPKSCCTSVNEIICHGIPDST-VLEDGMIVNVDVTVFYKGYHGDCSEMFLVGEVDQAGKDLVKV 804
GF + G+ RPG Q+P R VP I PDYA D IPKGK P LPW V+VK E DI MR AG++AREVLD AG+ VK G +TDD+D++ H+ V +GAYPSPLNY GFPKS CTSVNE+ICHGIPD+T +LE+G +VN+DVT+++ GYHGDCSEMF VGEVDQAGK+L++V
Sbjct: 26 GFEFAGKCRPGKQTPRRGVPTSIMLPDYAKDSIPKGKGPRLPWQVDVKTEEDIEGMRVAGRIAREVLDAAGRLVKPGISTDDVDKLAHDFTVSKGAYPSPLNYHGFPKSVCTSVNEVICHGIPDTTSLLEEGDMVNIDVTIYFNGYHGDCSEMFTVGEVDQAGKELLQV 194 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10280.466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10280.466.1 >prot_Ecto-sp8_S_contig10280.466.1 ID=prot_Ecto-sp8_S_contig10280.466.1|Name=mRNA_Ecto-sp8_S_contig10280.466.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=268bp MRAPLELADLALHDAFVHDSDVALAAGERKITIMLPLVLLTLSLARGVAHback to top mRNA from alignment at Ecto-sp8_S_contig10280:65..3912- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10280.466.1 ID=mRNA_Ecto-sp8_S_contig10280.466.1|Name=mRNA_Ecto-sp8_S_contig10280.466.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3848bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10280:65..3912- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10280:65..3912- >mRNA_Ecto-sp8_S_contig10280.466.1 ID=mRNA_Ecto-sp8_S_contig10280.466.1|Name=mRNA_Ecto-sp8_S_contig10280.466.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=804bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10280:65..3912- (Ectocarpus species8 EcLAC_412)back to top |