mRNA_Ecto-sp8_S_contig1028.465.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: A0A6H5KJ68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ68_9PHAE) HSP 1 Score: 1272 bits (3291), Expect = 0.000e+0 Identity = 823/993 (82.88%), Postives = 845/993 (85.10%), Query Frame = 1
Query: 1 QETVASINQELEEAVCARESASSAAAAAQGELVEEKARAEAAERQLKGATEEAAQLRTRLNDTTTELESARNALETDGTNRGGESANNGDDDEDAADLESEASYFKDHTCLPALKSIRDTITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNQLQAELESTVRDNVEMRRLIENTRQREEEENQHRLVQEGEAAATMAAMSSQLAESTEELEGLRERLTEVEQEEARIRASCSEKVSALEAAEGEVASLGASLAHTTEALEEAQQLAVTREEESSTAQRXXXXXXXXXXXXXXXXXXXAALAAEAEEGRGAAALXATVVLEXXXAATSEALSRVTELQTTLRETEAGRKSLLDTAASDAEKIEALAADVAKGLEEKEAAKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXTMAEAEKAHKVAVEKEVEARLGVEETLLMANKELQRLEIKKEEALSASKGLREECEGLTATVETLRAEAVAAAGDGGDKPNNVSXXXXXXXXXXXXXXXXXXEIARLRAVIEEMKRAGDEVGVARGSAGGVSSHDGRDPDDGXXXXXXXXXARRHGEGRASTKQQIMAERDSLRAELASEKEQAALRAAGLETQLADKEREAADTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATSMGGRGGGRMRAGGGSVASPKSTGRDPASIGAEVGGAVGGILRGKFWSGWGGGSVTSADTNGGGSTSEXXXGKGPAAAARKGSKARREGGRGYGEGKISTGAAGAGEADQQSISRVRENMMARLQEAAREGKAEQKETSGGADGVKNKDVGDANTDNSGSQGASGENKEETRSDVKHVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESVPAGAGTPTSPDSHSKETALWDLRVKVDLNG 2979
+E VASINQELEEAVCARESA SAAAAAQGELV+EKARA AAERQLKGATEEAAQLRTRLNDTTTELESARNALETDGTNR G+S NNGDDDEDAA LK IRD ITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNQLQ ELESTVRDNVE+RRLIENTRQREEEENQHRLVQEGEAAA +AAMSSQLAESTEELEGLRERL VEQEEARIRASCSEKVSALEAAEGEVASLGASLAHTTEALEEA+QL VTREEESSTAQRXXXXXXXXXXXXXXXX AALAAEAEEGR X TVVL XXX TSEALSRV EL+TTLRETEAGR+SLLDTAASDA+KIEALAADVAKGLEEKEAAKEE XXXXXXXXXXXXXXXXXXXXXXXXXXTMAEAEKAHKVAVEKEVEARL VEETLLMANKELQRL+IK EEALSAS GLREECE L ATVETLRA AVAAAGDGG+K N+VS E ARLRAV+EEMKR GDEVGV RG G VSSHDGRDPDD ARRHG+GRASTK+QI+AERDSLRAELASEKE DTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDAS RR PSSSATSM GRGGGR+RAGGGSVASPKSTGRDPASIGAEVGGAVGGILRGKFWSGWGGGSVTSADTNGGGST + X KIS GAAGAGEADQ+SISRVRENMMARLQEAAREGKAEQKETSGGADGVKNKDVG ANT+NSG QGASG N EETRS+ K VSDVGMAAAPRTVEDEWVEE VEHPPPDYGLESPVIRYLLQQWSTDPDK+KYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEES PAGAGTP PD HSKETALWDLRVKVDLNG
Sbjct: 114 EEAVASINQELEEAVCARESACSAAAAAQGELVQEKARAAAAERQLKGATEEAAQLRTRLNDTTTELESARNALETDGTNRVGKSTNNGDDDEDAA-----------------LKLIRDAITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNQLQEELESTVRDNVELRRLIENTRQREEEENQHRLVQEGEAAAALAAMSSQLAESTEELEGLRERLKNVEQEEARIRASCSEKVSALEAAEGEVASLGASLAHTTEALEEARQLVVTREEESSTAQRXXXXXXXXXXXXXXXXSNAAALAAEAEEGRAXXXXXXTVVLXXXXXXTSEALSRVKELETTLRETEAGRESLLDTAASDAKKIEALAADVAKGLEEKEAAKEEXXXXXXXXXXXXXXXXXXXXXXXXXXXTMAEAEKAHKVAVEKEVEARLAVEETLLMANKELQRLKIKNEEALSASNGLREECEVLKATVETLRAAAVAAAGDGGNKLNDVSTAVATQTDEAEENEEKEGEFARLRAVVEEMKRGGDEVGVVRGCVGDVSSHDGRDPDDSGSDEEEGDGARRHGKGRASTKRQILAERDSLRAELASEKEXXXXXXXXXXXXXXXXXXXXXDTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASLRRIPSSSATSMVGRGGGRLRAGGGSVASPKSTGRDPASIGAEVGGAVGGILRGKFWSGWGGGSVTSADTNGGGSTGDAGXXXXXXXXXXXXXXXXXXXXXXXXXXKISAGAAGAGEADQRSISRVRENMMARLQEAAREGKAEQKETSGGADGVKNKDVGHANTNNSGLQGASGNNMEETRSENKDVSDVGMAAAPRTVEDEWVEENVEHPPPDYGLESPVIRYLLQQWSTDPDKIKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESAPAGAGTPAYPDGHSKETALWDLRVKVDLNG 1089
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: D8LFB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB2_ECTSI) HSP 1 Score: 1040 bits (2688), Expect = 0.000e+0 Identity = 687/880 (78.07%), Postives = 696/880 (79.09%), Query Frame = 1
Query: 340 LKSIRDTITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNQLQAELESTVRDNVEMRRLIENTRQREEEENQHRLVQEGEAAATMAAMSSQLAESTEELEGLRERLTEVEQEEARIRASCSEKVSALEAAEGEVASLGASLAHTTEALEEAQQLAVTREEESSTAQRXXXXXXXXXXXXXXXXXXXAALAAEAEEGRGAAALXATVVLEXXXAATSEALSRVTELQTTLRETEAGRKSLLDTAASDAEKIEALAADVAKGLEEKEAAKEEAXXXXXXXXXXXXXXXXXXXXXXXXXXTMAEAEKAHKVAVEKEVEARLGVEETLLMANKELQRLEIKKEEALSASKGLREECEGLTATVETLRAEAVAAAGDGGDKPNNVSXXXXXXXXXXXXXXXXXXEIARLRAVIEEMKRAGDEVGVARGSAGGVSSHDGRDPDDGXXXXXXXXXARRHGEGRASTKQQIMAERDSLRAELASEKEQAALRAAGLETQLADKEREAADTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATSMGGRGGGRMRAGGGSVASPKSTGRDPASIGAEVGGAVGGILRGKFWSGWGGGSVTSADTNGGGSTSEXXXGKGPAAAARKGSKARREGGRGYGEGKISTGAAGAGEADQQSISRVRENMMARLQEAAREGKAEQKETSGGADGVKNKDVGDANTDNSGSQGASGENKEETRSDVKHVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESVPAGAGTPTSPDSHSKETALWDLRVKVDLNG 2979
LKSIRDTITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNQLQ ELESTVRDNVEMRRLIENTRQREEEENQHRLVQEGEAAA +AAMSSQLAESTEELEGLRERL VEQEEARI+ASCSE VSALEA+EGEVASLGASLAHTTEALEEAQQLAVTREEESS AQRXXXXXXXXXXXXXXXXXXX ALAAEAEEG X VVLE AATSEALSRVTEL+TTLRETEAGRKSLLD AASDAEKIEALAADVAKGLEEKEAAKEE XXXXXXXXXXXXXXXXXXXXXXXXX TM EAEKAHKVAVEKEVEARLGVEETLLMANK +MAERDSLRAELASEKEQA++RAAGLETQLADKEREAADTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATSMGGRGGGR+RAGGGSVASPKSTGRDPASIGAE ILRGKFWSGWGGGSVTSADTNGGGST E GK REGGRGYGEGKISTGAAGAGEAD QSISRVRENMMARLQEAAREGK EQKETSGGA GVKNKDVG ANTDNSGSQGASGENKEET SDVKHVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEES+PAGAGTPTSPDSHSKETALWDLRVKVDLNG
Sbjct: 105 LKSIRDTITAQPPSSPARTEGQEAVRPVASEDAVASALEKVNQLQEELESTVRDNVEMRRLIENTRQREEEENQHRLVQEGEAAANLAAMSSQLAESTEELEGLRERLKGVEQEEARIKASCSENVSALEASEGEVASLGASLAHTTEALEEAQQLAVTREEESSNAQRXXXXXXXXXXXXXXXXXXXXALAAEAEEGXXXXXXXXXVVLERERAATSEALSRVTELETTLRETEAGRKSLLDAAASDAEKIEALAADVAKGLEEKEAAKEEXXXXXXXXXXXXXXXXXXXXXXXXXXETMVEAEKAHKVAVEKEVEARLGVEETLLMANK-------------------------------------------------------------------------------------------------------------------------------------VMAERDSLRAELASEKEQASMRAAGLETQLADKEREAADTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATSMGGRGGGRLRAGGGSVASPKSTGRDPASIGAEXXXXXXXILRGKFWSGWGGGSVTSADTNGGGSTGEAGAGKXXXXXXXXXXXXXREGGRGYGEGKISTGAAGAGEADHQSISRVRENMMARLQEAAREGKVEQKETSGGAGGVKNKDVGGANTDNSGSQGASGENKEETGSDVKHVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESIPAGAGTPTSPDSHSKETALWDLRVKVDLNG 851
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: A0A7S2DLI1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLI1_9STRA) HSP 1 Score: 107 bits (267), Expect = 9.090e-23 Identity = 62/169 (36.69%), Postives = 95/169 (56.21%), Query Frame = 1
Query: 2515 EETR-SDVKHVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESVPAGAGTPTSPDSHSKETALWDLR-VKVDLNG*RPAPPRQGYTK 3015
EE+R S + SD G +A W +E+ HP P +G+E PVI++LL W++DP KL+Y+SLWL + +++ + FP+GLQLV L PEIKDGFLTL++P++R + G V V R + + + S+ T+ +V+ + PAP + G K
Sbjct: 14 EESRGSSDRRDSDTGGSA--------WEDESTLHPVPPFGIEDPVIQHLLTNWTSDPQKLRYVSLWLTVLAGTKEIAETFPAGLQLVSLRPEIKDGFLTLIVPILRKSRGSRVSVKVRPEGEKWGLKIKVSSVDEAAESSQPTSRRSSGGQRVEKSNTEPAPSQDGTRK 174
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: A0A7S2DMV1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMV1_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.390e-22 Identity = 51/110 (46.36%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 2515 EETR-SDVKHVSDVGMAAAPRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGG 2841
EE+R S + SD G +A W +E+ HP P +G+E PVI++LL W++DP KL+Y+SLWL + +++ + FP+GLQLV L PEIKDGFLTL++P++R + G
Sbjct: 14 EESRGSSDRRDSDTGGSA--------WEDESTLHPVPPFGIEDPVIQHLLTNWTSDPQKLRYVSLWLTVLAGTKEIAETFPAGLQLVSLRPEIKDGFLTLIVPILRKSRG 115
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: A0A7S2SI89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SI89_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.810e-19 Identity = 46/83 (55.42%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 2590 WVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIER---RKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIR 2829
W ET ++P P +G+ SPVI++LL W++DP KL+Y+SLWL +I VP++FPSGLQL+GL PEIKDGFLTL++PM++
Sbjct: 203 WRRETQDNPVPPFGIGSPVIQHLLASWTSDPQKLRYVSLWLSVLINEDPATPVPESFPSGLQLIGLKPEIKDGFLTLIVPMLK 285
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: A0A7S2SIB0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIB0_9STRA) HSP 1 Score: 103 bits (258), Expect = 9.170e-19 Identity = 46/83 (55.42%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 2590 WVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIER---RKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIR 2829
W ET ++P P +G+ SPVI++LL W++DP KL+Y+SLWL +I VP++FPSGLQL+GL PEIKDGFLTL++PM++
Sbjct: 655 WRRETQDNPVPPFGIGSPVIQHLLASWTSDPQKLRYVSLWLSVLINEDPATPVPESFPSGLQLIGLKPEIKDGFLTLIVPMLK 737
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: A0A662Y4D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4D6_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 4.630e-17 Identity = 51/125 (40.80%), Postives = 72/125 (57.60%), Query Frame = 1
Query: 2503 GENKEETRSDVKHVSDVGMAA--APRTVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWL-RCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRR 2868
GE +E +D K D G A + W EE V HP P + L+SP + YLL W+ + K++YL WL + V+ R +P FP G++L L PE++DGFLTLV+P++R +L HSRR
Sbjct: 267 GEESDEEATDKKPKKDTGRRARASANAALPNWQEELVRHPTPHFDLDSPEVTYLLHAWTANVKKMQYLRRWLTQVVVTRGPLPADFPMGVELPRLPPEVRDGFLTLVVPLLRRQTEREILAHSRR 391
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: A0A484ECE1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECE1_BRELC) HSP 1 Score: 94.0 bits (232), Expect = 9.880e-17 Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = 1
Query: 2575 TVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERR-KVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRR 2868
TV +W EE V HP P + L SP + YLL+ W+ D K +YL WL V++ + +PDAFP ++L L+PE++DGFLTLV+P++R +L H R+
Sbjct: 236 TVNSKWFEELVRHPTPHFDLNSPEVAYLLRAWTIDMKKWRYLRRWLLQVVQTKGPLPDAFPMAVELPRLSPEVRDGFLTLVLPLLRKQTERDILAHCRK 334
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: A0A8K1C2V5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2V5_PYTOL) HSP 1 Score: 94.0 bits (232), Expect = 1.480e-16 Identity = 43/98 (43.88%), Postives = 65/98 (66.33%), Query Frame = 1
Query: 2578 VEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWL-RCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRR 2868
+E W E+ + HP P + L+SP ++YLLQ W+ + KL+Y+ WL V+E +PD FP G++L L PEI+DGFLTLV+P++R + VH+R+
Sbjct: 267 IEFAWQEDLIRHPTPHFDLDSPEVQYLLQSWTQNIKKLQYIRTWLTHVVVETADLPDDFPMGIELPRLLPEIRDGFLTLVVPLLRKQTRREIQVHTRQ 364
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Match: A0A0W8DHJ6_PHYNI (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DHJ6_PHYNI) HSP 1 Score: 93.6 bits (231), Expect = 1.840e-16 Identity = 47/109 (43.12%), Postives = 70/109 (64.22%), Query Frame = 1
Query: 2554 GMAAAPR---TVEDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERR-KVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRR 2868
G A AP +V +W EE V HP P + LESP + Y+L+ W+ + K++YL WL V++ + +P+ FP G++L L PE++DGFLTLV+P++R +L HSRR
Sbjct: 251 GRARAPADADSVNPKWHEELVRHPTPHFDLESPEVAYILRAWTNNIKKMRYLRRWLIQVVKTKGPLPEDFPMGVELPRLPPEVRDGFLTLVLPLLRQQTEREILAHSRR 359 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1028.465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1028.465.1 >prot_Ecto-sp8_S_contig1028.465.1 ID=prot_Ecto-sp8_S_contig1028.465.1|Name=mRNA_Ecto-sp8_S_contig1028.465.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=824bp MRRLIENTRQREEEENQHRLVQEGEAAATMAAMSSQLAESTEELEGLRERback to top mRNA from alignment at Ecto-sp8_S_contig1028:11314..17568- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1028.465.1 ID=mRNA_Ecto-sp8_S_contig1028.465.1|Name=mRNA_Ecto-sp8_S_contig1028.465.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6255bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1028:11314..17568- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1028:11314..17568- >mRNA_Ecto-sp8_S_contig1028.465.1 ID=mRNA_Ecto-sp8_S_contig1028.465.1|Name=mRNA_Ecto-sp8_S_contig1028.465.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2472bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1028:11314..17568- (Ectocarpus species8 EcLAC_412)back to top |