mRNA_Ecto-sp8_S_contig10278.460.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: D7G776_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G776_ECTSI) HSP 1 Score: 653 bits (1684), Expect = 3.120e-236 Identity = 317/323 (98.14%), Postives = 318/323 (98.45%), Query Frame = 1
Query: 1 NPGVKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGLNAHSEEESSDHENGAAGARTGGDFSVRAMADAITAPDVLQMVFERIAQKRRIA 969
NP VKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHW+YADYKHLKELEDDWAKALEP IDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGP WLNPTEQAVWPIEETLAVASLAFQGLNAH EEESSDHENGAAGAR GGDFSVRAMADAITAPDVLQMVFERIAQKRRIA
Sbjct: 46 NPRVKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWSYADYKHLKELEDDWAKALEPIIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPGWLNPTEQAVWPIEETLAVASLAFQGLNAHPEEESSDHENGAAGARAGGDFSVRAMADAITAPDVLQMVFERIAQKRRIA 368
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: A0A836C731_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C731_9STRA) HSP 1 Score: 252 bits (644), Expect = 4.460e-79 Identity = 132/314 (42.04%), Postives = 191/314 (60.83%), Query Frame = 1
Query: 19 LRTTWRIHPLGVSTVWEADCIFLE-ASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGLNAHSEEESSDHENGAAGARTGGDFSVRAMADAITAPDVLQMVFERIAQK 957
+R+T+R+HP TV E +CI+++ A++ F EW E + NPF+ YDRN WAYADY H E+ + +A +DWS++G A T WLG+ G+HTPLHFDTYG N+V QLHG K+W L+PP+ T L PTRIP+EESSV+S +D R D A AV L PGDVLFVP+HWWHFVE T T++SVN+W+D P+D R E++ARV++TS+ L++++G WL+PTE+ W ++ + + +A Q ++ A A S + + DA+ AP LQ + ++ ++
Sbjct: 16 VRSTFRVHPRVPRTVREPECIYVQDATLNHFKEW---VEGKQIDDTNPFQRYDRNEFWAYADYMHFGEIFGERTEAAAALLDWSSIGIGDAP-QPTFWLGSAGAHTPLHFDTYGTNVVVQLHGEKRWTLFPPSATELLKPTRIPFEESSVYSGLDIRQLDGHSATGAAALCQTAV-LRPGDVLFVPRHWWHFVECTSTAMSVNLWMDHPDDPSARVTEALARVVVTSMQEALESQLGSEWLSPTEEE-WTPDQAMEMLQIAVQS------------QSSAGDAPPQPPASFQDVLDALLAPTTLQHIARQLTRR 311
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: A0A6P4XGZ5_BRABE (HSPB1-associated protein 1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XGZ5_BRABE) HSP 1 Score: 243 bits (619), Expect = 6.500e-75 Identity = 119/267 (44.57%), Postives = 169/267 (63.30%), Query Frame = 1
Query: 16 RLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGD----NPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAF 801
R RT R +P +WE DC +++AS+ QF W P E + NP + Y+ + WAY DYK++ EL D LE + W G ++ +ST+W+G+ G+HTP H+DTYG NLV Q++GRKKW+L+PP D+ +L PTR+PYEESSVFSQV+ P++ + P+ +HP V LEPGDVLFVPKHWWH+VE+ TS++VN W++ +D+EDR +E+V R+++ S+ G D WLNPTE T ++L F
Sbjct: 52 RFRTGPR-NPASKDVLWETDCEYIDASLYQFCLWLDPVSPHPPEDNSTDSNPLQPYNPDNTWAYLDYKYMAELFSDQPDILE-AVRWEDFGFPGRSGVESTIWVGSVGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPSLYPTRLPYEESSVFSQVNVAHPNVEQHPKVVNSHPYVVVLEPGDVLFVPKHWWHYVESLSTSIAVNSWIEMTSDAEDRLQEAVVRLVLLSIKSGSDQS---QWLNPTENV------TSRASNLGF 307
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI0018D8A80B (HSPB1-associated protein 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8A80B) HSP 1 Score: 245 bits (626), Expect = 1.340e-73 Identity = 120/236 (50.85%), Postives = 156/236 (66.10%), Query Frame = 1
Query: 55 STVWEADCIFLEASVGQFLEWEKSAEPLSAEGD---NPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTE 750
S +WE DC EA++GQF EW +S P + NP Y R HW Y DYK + + +D L+ + WS LG E + STLW+G+ G+ TP H+DTYG NLVAQ++GRK+W L+PP+ T L PTRIPYEESSVFS V+ P L R+P+F EA P VTLEPG+VLFVPKHWWHFVE+ +TS+S+N WVD +D E R +E+V RVL++SL + W+NP+E
Sbjct: 63 SVLWEVDCTHEEATLGQFCEWLRSDAPTTCSAQTSQNPLLKYKRQDHWCYVDYKQMAFMFEDHPDILQ-AVRWSDLGFEDRDGRQSTLWIGSAGAFTPGHYDTYGFNLVAQIYGRKRWHLFPPSQTHLLYPTRIPYEESSVFSPVNIANPALDRYPKFVEATPYVVTLEPGEVLFVPKHWWHFVESLETSISINTWVDVESDKESRIQEAVTRVLISSLMSTSCDSM--KWVNPSE 295
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: C3Z534_BRAFL (JmjC domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z534_BRAFL) HSP 1 Score: 236 bits (601), Expect = 3.820e-72 Identity = 116/258 (44.96%), Postives = 164/258 (63.57%), Query Frame = 1
Query: 16 RLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSA------------EGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTE 750
R RT R +P +WE DC +++A++ QF +W +P+S+ E NPF+ Y WAY DYK++ E+ D L+ + W G + T+ST+W+G+ G+HTP H+DTYG NLV Q++GRKKW+L+PP D+ L PTR+PYEESSVFSQV+ PD+ P+ +HP V LEPGDVLFVPKHWWH+VE+ TS++VN W++ +D+EDR +E+V R+++ S+ D WLNPTE
Sbjct: 55 RFRTGPR-NPASKDVLWEMDCEYIDATLQQFCDW---LDPVSSPAPREECVTDNKEDSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQG-VRWEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPKLYPTRLPYEESSVFSQVNVAHPDVEEHPKVMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVAVNSWIEMASDAEDRLQEAVVRLVLLSIKSDSDQS---QWLNPTE 304
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI001603A1F7 (HSPB1-associated protein 1-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001603A1F7) HSP 1 Score: 241 bits (614), Expect = 6.530e-72 Identity = 124/282 (43.97%), Postives = 175/282 (62.06%), Query Frame = 1
Query: 16 RLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSA------------EGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGLNAHS 822
R RT R +P +WE DC +++A++ QF EW +P+S+ E NPF+ Y WAY DYK++ E+ D L+ + W G + T+ST+W+G+ G+HTP H+DTYG NLV Q++GRKKW+L+PP D+ L PTR+PYEESSVFSQV+ PD+ + P+ +HP V LEPGDVLFVPKHWWH+VE+ TS++VN W++ +D+EDR +E+V R+++ S+ DA+ P WLNPTE V L A + L A +
Sbjct: 55 RFRTGPR-NPASKDVLWETDCEYIDATLQQFCEW---LDPVSSPAPREECVTDNKENSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQG-VRWEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSANLYPTRLPYEESSVFSQVNVAHPDIQQHPKLMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVAVNSWIEMASDAEDRLQEAVVRLVLLSIKS--DADQSP-WLNPTEN-VTSRASNLGYLQAALEELRARN 327
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: A0A8B7XWE9_ACAPL (HSPB1-associated protein 1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XWE9_ACAPL) HSP 1 Score: 238 bits (608), Expect = 9.000e-71 Identity = 120/262 (45.80%), Postives = 166/262 (63.36%), Query Frame = 1
Query: 55 STVWEADCIFLEASVGQFLEWEKS--AEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGP-SWLNPTEQAVWPIEETLAVASLAFQGLNAHSEE 828
S +WE DC+ EA++ QF EW +S S NP Y R HW Y DYK + L +D + LE + WS LG E + ST+W+G+ G+ TP H+DTYG NLVAQ++GRK+W L+PP+ T+ L PTRIPYEESS+FS ++ P + R+P+F E+ P +TLEPG+VLFVPKHWWHFVE+ + S+S+N WVD +D E R +E+V R+L++ L + GP W+ PTE A+ E + A Q + SE+
Sbjct: 70 SVLWEVDCVHEEATLHQFCEWLRSDATSAWSGTSPNPLLKYSRGEHWCYVDYKQMAFLFEDHPEILE-AVRWSDLGFEHRDGRQSTIWIGSEGAFTPGHYDTYGFNLVAQIYGRKRWHLFPPSQTSLLYPTRIPYEESSIFSPINIANPAVDRYPKFVESTPYVLTLEPGEVLFVPKHWWHFVESLEVSISINSWVDVESDRESRVQEAVTRLLVSIL---MSNSCGPRKWVCPTE-AICSEEVNYSYVRAALQESSCRSEQ 326
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI0001CBC150 (HSPB1-associated protein 1 homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC150) HSP 1 Score: 234 bits (597), Expect = 2.590e-70 Identity = 113/259 (43.63%), Postives = 165/259 (63.71%), Query Frame = 1
Query: 61 VWEADCIFLEASVGQFLEW-EKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLG-CEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGLNAHSEEE 831
+WE DC++ A++ + EW K +E LS DNP + + +W YADYK++ + D L+ ++ WS G ++ T+ST+W+G+ GSHTP HFDTYG NLVAQ+HG+KKW L+ P T L PTRIPYEESSVFS V+ PDL + P F +A P +TL+PGDVL+VP+HWWHFVE ++S+N W++ D++ R +ES+ R++ ++ + G SWLNPTE+ P E L A + ++ + E+
Sbjct: 74 LWERDCMYRNATLYCYNEWLNKDSEQLSE--DNPLKEFPSTDYWCYADYKYMAHVFQDRTDILK-SVKWSNFGFADRDGTESTIWIGSEGSHTPCHFDTYGCNLVAQIHGKKKWSLFAPHQTAMLYPTRIPYEESSVFSHVNITNPDLKKHPCFQDATPYVITLQPGDVLYVPRHWWHFVECLTPAISINTWIELNVDNQARLEESIVRLITCNMMSSKNTNDG-SWLNPTEEMTSP-EVNLEYLKAAMKSVDEKNTEQ 327
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI000BA8294C (HSPB1-associated protein 1-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA8294C) HSP 1 Score: 233 bits (595), Expect = 3.380e-70 Identity = 111/250 (44.40%), Postives = 156/250 (62.40%), Query Frame = 1
Query: 64 WEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGL 810
WE D +++ S+ +F +W +A ++ Y + HW Y+ Y ++ ++ + L+ +DW T G E + +ST W+G+ G+HTP H DTYG NLVAQ+ GRK+W+L+PP D L PTRIPYEESS+FS+V+ PDL + P+F AHP +TLEPG+VLFVPK WWHFVE + S+SVN W++ P+D E R E+V R LMT+L + W+NPTE+ V P EETL + L
Sbjct: 69 WERDADYIKCSLQEFFDWVNE----TASKESSLASYSPSTHWCYSSYNYMSKVFESIPHILQ-VVDWKTFGFENRKGKESTFWVGSSGAHTPCHQDTYGCNLVAQVCGRKRWVLFPPEDVAHLYPTRIPYEESSIFSEVNVTCPDLSKHPKFRNAHPYIITLEPGEVLFVPKLWWHFVECLEPSISVNTWIELPSDEESRLNEAVVRTLMTALIPVYQPDE-MEWINPTEELVSP-EETLHYIRIVLNNL 311
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI001EB08E4C (uncharacterized protein LOC124127131 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB08E4C) HSP 1 Score: 238 bits (607), Expect = 1.510e-69 Identity = 114/244 (46.72%), Postives = 158/244 (64.75%), Query Frame = 1
Query: 61 VWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPS---WLNPTEQAVWPIEETL 780
VWE DC+ +EAS+ F +W G NP H Y DYK++ ++ +D + L+ + DWS G + DST+W+G+GG+ TP H+DTYG NLVAQ+HGRK+W L+PP+ T AL PTR+PYEESSVFS+V+ PDL + P F E+ + VTLEPG VL+VP+HWWH+VE T++S+N WVD PND E R ESV R ++ L ++++VG W+NP EQ + P++ L
Sbjct: 61 VWETDCVHIEASLADFADWTAG----KTRGGNPLCHVSLEDFSCYVDYKYMSDMFEDCSDLLK-SADWSVFGLSGRDGKDSTIWIGSGGASTPCHYDTYGYNLVAQIHGRKRWHLFPPSSTEALYPTRLPYEESSVFSEVNVGQPDLSKHPLFKESQAVVVTLEPGQVLYVPRHWWHYVECLHTAISINTWVDVPNDDESRLSESVTRATISCL---VNSDVGAHLEHWINPGEQ-IMPMDVNL 295 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10278.460.1 >prot_Ecto-sp8_S_contig10278.460.1 ID=prot_Ecto-sp8_S_contig10278.460.1|Name=mRNA_Ecto-sp8_S_contig10278.460.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=324bp NPGVKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGback to top mRNA from alignment at Ecto-sp8_S_contig10278:328..2722+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10278.460.1 ID=mRNA_Ecto-sp8_S_contig10278.460.1|Name=mRNA_Ecto-sp8_S_contig10278.460.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2395bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10278:328..2722+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10278:328..2722+ >mRNA_Ecto-sp8_S_contig10278.460.1 ID=mRNA_Ecto-sp8_S_contig10278.460.1|Name=mRNA_Ecto-sp8_S_contig10278.460.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=972bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10278:328..2722+ (Ectocarpus species8 EcLAC_412)back to top |