mRNA_Ecto-sp8_S_contig10278.460.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10278.460.1
Unique NamemRNA_Ecto-sp8_S_contig10278.460.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: D7G776_ECTSI (JmjC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G776_ECTSI)

HSP 1 Score: 653 bits (1684), Expect = 3.120e-236
Identity = 317/323 (98.14%), Postives = 318/323 (98.45%), Query Frame = 1
Query:    1 NPGVKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGLNAHSEEESSDHENGAAGARTGGDFSVRAMADAITAPDVLQMVFERIAQKRRIA 969
            NP VKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHW+YADYKHLKELEDDWAKALEP IDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGP WLNPTEQAVWPIEETLAVASLAFQGLNAH EEESSDHENGAAGAR GGDFSVRAMADAITAPDVLQMVFERIAQKRRIA
Sbjct:   46 NPRVKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWSYADYKHLKELEDDWAKALEPIIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPGWLNPTEQAVWPIEETLAVASLAFQGLNAHPEEESSDHENGAAGARAGGDFSVRAMADAITAPDVLQMVFERIAQKRRIA 368          
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: A0A836C731_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C731_9STRA)

HSP 1 Score: 252 bits (644), Expect = 4.460e-79
Identity = 132/314 (42.04%), Postives = 191/314 (60.83%), Query Frame = 1
Query:   19 LRTTWRIHPLGVSTVWEADCIFLE-ASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGLNAHSEEESSDHENGAAGARTGGDFSVRAMADAITAPDVLQMVFERIAQK 957
            +R+T+R+HP    TV E +CI+++ A++  F EW    E    +  NPF+ YDRN  WAYADY H  E+  +  +A    +DWS++G   A    T WLG+ G+HTPLHFDTYG N+V QLHG K+W L+PP+ T  L PTRIP+EESSV+S +D R  D       A     AV L PGDVLFVP+HWWHFVE T T++SVN+W+D P+D   R  E++ARV++TS+   L++++G  WL+PTE+  W  ++ + +  +A Q             ++ A  A      S + + DA+ AP  LQ +  ++ ++
Sbjct:   16 VRSTFRVHPRVPRTVREPECIYVQDATLNHFKEW---VEGKQIDDTNPFQRYDRNEFWAYADYMHFGEIFGERTEAAAALLDWSSIGIGDAP-QPTFWLGSAGAHTPLHFDTYGTNVVVQLHGEKRWTLFPPSATELLKPTRIPFEESSVYSGLDIRQLDGHSATGAAALCQTAV-LRPGDVLFVPRHWWHFVECTSTAMSVNLWMDHPDDPSARVTEALARVVVTSMQEALESQLGSEWLSPTEEE-WTPDQAMEMLQIAVQS------------QSSAGDAPPQPPASFQDVLDALLAPTTLQHIARQLTRR 311          
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: A0A6P4XGZ5_BRABE (HSPB1-associated protein 1-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4XGZ5_BRABE)

HSP 1 Score: 243 bits (619), Expect = 6.500e-75
Identity = 119/267 (44.57%), Postives = 169/267 (63.30%), Query Frame = 1
Query:   16 RLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEGD----NPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAF 801
            R RT  R +P     +WE DC +++AS+ QF  W     P   E +    NP + Y+ +  WAY DYK++ EL  D    LE  + W   G   ++  +ST+W+G+ G+HTP H+DTYG NLV Q++GRKKW+L+PP D+ +L PTR+PYEESSVFSQV+   P++ + P+   +HP  V LEPGDVLFVPKHWWH+VE+  TS++VN W++  +D+EDR +E+V R+++ S+  G D      WLNPTE        T   ++L F
Sbjct:   52 RFRTGPR-NPASKDVLWETDCEYIDASLYQFCLWLDPVSPHPPEDNSTDSNPLQPYNPDNTWAYLDYKYMAELFSDQPDILE-AVRWEDFGFPGRSGVESTIWVGSVGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPSLYPTRLPYEESSVFSQVNVAHPNVEQHPKVVNSHPYVVVLEPGDVLFVPKHWWHYVESLSTSIAVNSWIEMTSDAEDRLQEAVVRLVLLSIKSGSDQS---QWLNPTENV------TSRASNLGF 307          
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI0018D8A80B (HSPB1-associated protein 1-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8A80B)

HSP 1 Score: 245 bits (626), Expect = 1.340e-73
Identity = 120/236 (50.85%), Postives = 156/236 (66.10%), Query Frame = 1
Query:   55 STVWEADCIFLEASVGQFLEWEKSAEPLSAEGD---NPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTE 750
            S +WE DC   EA++GQF EW +S  P +       NP   Y R  HW Y DYK +  + +D    L+  + WS LG E +    STLW+G+ G+ TP H+DTYG NLVAQ++GRK+W L+PP+ T  L PTRIPYEESSVFS V+   P L R+P+F EA P  VTLEPG+VLFVPKHWWHFVE+ +TS+S+N WVD  +D E R +E+V RVL++SL       +   W+NP+E
Sbjct:   63 SVLWEVDCTHEEATLGQFCEWLRSDAPTTCSAQTSQNPLLKYKRQDHWCYVDYKQMAFMFEDHPDILQ-AVRWSDLGFEDRDGRQSTLWIGSAGAFTPGHYDTYGFNLVAQIYGRKRWHLFPPSQTHLLYPTRIPYEESSVFSPVNIANPALDRYPKFVEATPYVVTLEPGEVLFVPKHWWHFVESLETSISINTWVDVESDKESRIQEAVTRVLISSLMSTSCDSM--KWVNPSE 295          
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: C3Z534_BRAFL (JmjC domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z534_BRAFL)

HSP 1 Score: 236 bits (601), Expect = 3.820e-72
Identity = 116/258 (44.96%), Postives = 164/258 (63.57%), Query Frame = 1
Query:   16 RLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSA------------EGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTE 750
            R RT  R +P     +WE DC +++A++ QF +W    +P+S+            E  NPF+ Y     WAY DYK++ E+  D    L+  + W   G   +  T+ST+W+G+ G+HTP H+DTYG NLV Q++GRKKW+L+PP D+  L PTR+PYEESSVFSQV+   PD+   P+   +HP  V LEPGDVLFVPKHWWH+VE+  TS++VN W++  +D+EDR +E+V R+++ S+    D      WLNPTE
Sbjct:   55 RFRTGPR-NPASKDVLWEMDCEYIDATLQQFCDW---LDPVSSPAPREECVTDNKEDSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQG-VRWEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSPKLYPTRLPYEESSVFSQVNVAHPDVEEHPKVMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVAVNSWIEMASDAEDRLQEAVVRLVLLSIKSDSDQS---QWLNPTE 304          
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI001603A1F7 (HSPB1-associated protein 1-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001603A1F7)

HSP 1 Score: 241 bits (614), Expect = 6.530e-72
Identity = 124/282 (43.97%), Postives = 175/282 (62.06%), Query Frame = 1
Query:   16 RLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSA------------EGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGLNAHS 822
            R RT  R +P     +WE DC +++A++ QF EW    +P+S+            E  NPF+ Y     WAY DYK++ E+  D    L+  + W   G   +  T+ST+W+G+ G+HTP H+DTYG NLV Q++GRKKW+L+PP D+  L PTR+PYEESSVFSQV+   PD+ + P+   +HP  V LEPGDVLFVPKHWWH+VE+  TS++VN W++  +D+EDR +E+V R+++ S+    DA+  P WLNPTE  V      L     A + L A +
Sbjct:   55 RFRTGPR-NPASKDVLWETDCEYIDATLQQFCEW---LDPVSSPAPREECVTDNKENSNPFQPYHPAHTWAYLDYKYMAEVFCDQPDILQG-VRWEDFGFPGRTGTESTIWVGSAGAHTPCHYDTYGCNLVLQVYGRKKWVLFPPEDSANLYPTRLPYEESSVFSQVNVAHPDIQQHPKLMSSHPHVVILEPGDVLFVPKHWWHYVESLSTSVAVNSWIEMASDAEDRLQEAVVRLVLLSIKS--DADQSP-WLNPTEN-VTSRASNLGYLQAALEELRARN 327          
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: A0A8B7XWE9_ACAPL (HSPB1-associated protein 1-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XWE9_ACAPL)

HSP 1 Score: 238 bits (608), Expect = 9.000e-71
Identity = 120/262 (45.80%), Postives = 166/262 (63.36%), Query Frame = 1
Query:   55 STVWEADCIFLEASVGQFLEWEKS--AEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGP-SWLNPTEQAVWPIEETLAVASLAFQGLNAHSEE 828
            S +WE DC+  EA++ QF EW +S      S    NP   Y R  HW Y DYK +  L +D  + LE  + WS LG E +    ST+W+G+ G+ TP H+DTYG NLVAQ++GRK+W L+PP+ T+ L PTRIPYEESS+FS ++   P + R+P+F E+ P  +TLEPG+VLFVPKHWWHFVE+ + S+S+N WVD  +D E R +E+V R+L++ L   +    GP  W+ PTE A+   E   +    A Q  +  SE+
Sbjct:   70 SVLWEVDCVHEEATLHQFCEWLRSDATSAWSGTSPNPLLKYSRGEHWCYVDYKQMAFLFEDHPEILE-AVRWSDLGFEHRDGRQSTIWIGSEGAFTPGHYDTYGFNLVAQIYGRKRWHLFPPSQTSLLYPTRIPYEESSIFSPINIANPAVDRYPKFVESTPYVLTLEPGEVLFVPKHWWHFVESLEVSISINSWVDVESDRESRVQEAVTRLLVSIL---MSNSCGPRKWVCPTE-AICSEEVNYSYVRAALQESSCRSEQ 326          
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI0001CBC150 (HSPB1-associated protein 1 homolog n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBC150)

HSP 1 Score: 234 bits (597), Expect = 2.590e-70
Identity = 113/259 (43.63%), Postives = 165/259 (63.71%), Query Frame = 1
Query:   61 VWEADCIFLEASVGQFLEW-EKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLG-CEKAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGLNAHSEEE 831
            +WE DC++  A++  + EW  K +E LS   DNP + +    +W YADYK++  +  D    L+ ++ WS  G  ++  T+ST+W+G+ GSHTP HFDTYG NLVAQ+HG+KKW L+ P  T  L PTRIPYEESSVFS V+   PDL + P F +A P  +TL+PGDVL+VP+HWWHFVE    ++S+N W++   D++ R +ES+ R++  ++    +   G SWLNPTE+   P E  L     A + ++  + E+
Sbjct:   74 LWERDCMYRNATLYCYNEWLNKDSEQLSE--DNPLKEFPSTDYWCYADYKYMAHVFQDRTDILK-SVKWSNFGFADRDGTESTIWIGSEGSHTPCHFDTYGCNLVAQIHGKKKWSLFAPHQTAMLYPTRIPYEESSVFSHVNITNPDLKKHPCFQDATPYVITLQPGDVLYVPRHWWHFVECLTPAISINTWIELNVDNQARLEESIVRLITCNMMSSKNTNDG-SWLNPTEEMTSP-EVNLEYLKAAMKSVDEKNTEQ 327          
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI000BA8294C (HSPB1-associated protein 1-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA8294C)

HSP 1 Score: 233 bits (595), Expect = 3.380e-70
Identity = 111/250 (44.40%), Postives = 156/250 (62.40%), Query Frame = 1
Query:   64 WEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTEQAVWPIEETLAVASLAFQGL 810
            WE D  +++ S+ +F +W       +A  ++    Y  + HW Y+ Y ++ ++ +     L+  +DW T G E +   +ST W+G+ G+HTP H DTYG NLVAQ+ GRK+W+L+PP D   L PTRIPYEESS+FS+V+   PDL + P+F  AHP  +TLEPG+VLFVPK WWHFVE  + S+SVN W++ P+D E R  E+V R LMT+L      +    W+NPTE+ V P EETL    +    L
Sbjct:   69 WERDADYIKCSLQEFFDWVNE----TASKESSLASYSPSTHWCYSSYNYMSKVFESIPHILQ-VVDWKTFGFENRKGKESTFWVGSSGAHTPCHQDTYGCNLVAQVCGRKRWVLFPPEDVAHLYPTRIPYEESSIFSEVNVTCPDLSKHPKFRNAHPYIITLEPGEVLFVPKLWWHFVECLEPSISVNTWIELPSDEESRLNEAVVRTLMTALIPVYQPDE-MEWINPTEELVSP-EETLHYIRIVLNNL 311          
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Match: UPI001EB08E4C (uncharacterized protein LOC124127131 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB08E4C)

HSP 1 Score: 238 bits (607), Expect = 1.510e-69
Identity = 114/244 (46.72%), Postives = 158/244 (64.75%), Query Frame = 1
Query:   61 VWEADCIFLEASVGQFLEWEKSAEPLSAEGDNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCE-KAATDSTLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPYEESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEATDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPS---WLNPTEQAVWPIEETL 780
            VWE DC+ +EAS+  F +W          G NP  H        Y DYK++ ++ +D +  L+ + DWS  G   +   DST+W+G+GG+ TP H+DTYG NLVAQ+HGRK+W L+PP+ T AL PTR+PYEESSVFS+V+   PDL + P F E+  + VTLEPG VL+VP+HWWH+VE   T++S+N WVD PND E R  ESV R  ++ L   ++++VG     W+NP EQ + P++  L
Sbjct:   61 VWETDCVHIEASLADFADWTAG----KTRGGNPLCHVSLEDFSCYVDYKYMSDMFEDCSDLLK-SADWSVFGLSGRDGKDSTIWIGSGGASTPCHYDTYGYNLVAQIHGRKRWHLFPPSSTEALYPTRLPYEESSVFSEVNVGQPDLSKHPLFKESQAVVVTLEPGQVLYVPRHWWHYVECLHTAISINTWVDVPNDDESRLSESVTRATISCL---VNSDVGAHLEHWINPGEQ-IMPMDVNL 295          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10278.460.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G776_ECTSI3.120e-23698.14JmjC domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836C731_9STRA4.460e-7942.04JmjC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6P4XGZ5_BRABE6.500e-7544.57HSPB1-associated protein 1-like n=1 Tax=Branchiost... [more]
UPI0018D8A80B1.340e-7350.85HSPB1-associated protein 1-like n=1 Tax=Patiria mi... [more]
C3Z534_BRAFL3.820e-7244.96JmjC domain-containing protein n=1 Tax=Branchiosto... [more]
UPI001603A1F76.530e-7243.97HSPB1-associated protein 1-like n=1 Tax=Branchiost... [more]
A0A8B7XWE9_ACAPL9.000e-7145.80HSPB1-associated protein 1-like n=1 Tax=Acanthaste... [more]
UPI0001CBC1502.590e-7043.63HSPB1-associated protein 1 homolog n=1 Tax=Saccogl... [more]
UPI000BA8294C3.380e-7044.40HSPB1-associated protein 1-like n=1 Tax=Limulus po... [more]
UPI001EB08E4C1.510e-6946.72uncharacterized protein LOC124127131 n=2 Tax=Halio... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10278contigEcto-sp8_S_contig10278:328..2722 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score657.1
Seed ortholog evalue4.1e-186
Seed eggNOG ortholog2880.D7G776
Preferred nameHSPBAP1
Model size972
KEGG koko:K19375
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
Exons7
EggNOG free text desc.tRNAPhe (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity
EggNOG OGsKOG2132@1,KOG2132@2759
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-01_010780.1
Cds size972
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10278.460.1prot_Ecto-sp8_S_contig10278.460.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10278 328..2722 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143126.3624873-CDS-Ecto-sp8_S_contig10278:327..5031681143126.3624873-CDS-Ecto-sp8_S_contig10278:327..503Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10278 328..503 +
1681143126.3853474-CDS-Ecto-sp8_S_contig10278:703..7431681143126.3853474-CDS-Ecto-sp8_S_contig10278:703..743Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10278 704..743 +
1681143126.400103-CDS-Ecto-sp8_S_contig10278:929..10791681143126.400103-CDS-Ecto-sp8_S_contig10278:929..1079Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10278 930..1079 +
1681143126.4109035-CDS-Ecto-sp8_S_contig10278:1454..15911681143126.4109035-CDS-Ecto-sp8_S_contig10278:1454..1591Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10278 1455..1591 +
1681143126.4240377-CDS-Ecto-sp8_S_contig10278:1868..20851681143126.4240377-CDS-Ecto-sp8_S_contig10278:1868..2085Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10278 1869..2085 +
1681143126.4354308-CDS-Ecto-sp8_S_contig10278:2295..24191681143126.4354308-CDS-Ecto-sp8_S_contig10278:2295..2419Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10278 2296..2419 +
1681143126.4461114-CDS-Ecto-sp8_S_contig10278:2594..27221681143126.4461114-CDS-Ecto-sp8_S_contig10278:2594..2722Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10278 2595..2722 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10278.460.1

>prot_Ecto-sp8_S_contig10278.460.1 ID=prot_Ecto-sp8_S_contig10278.460.1|Name=mRNA_Ecto-sp8_S_contig10278.460.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=324bp
NPGVKRLRTTWRIHPLGVSTVWEADCIFLEASVGQFLEWEKSAEPLSAEG
DNPFRHYDRNAHWAYADYKHLKELEDDWAKALEPTIDWSTLGCEKAATDS
TLWLGTGGSHTPLHFDTYGVNLVAQLHGRKKWLLYPPADTTALAPTRIPY
EESSVFSQVDARAPDLVRFPQFAEAHPLAVTLEPGDVLFVPKHWWHFVEA
TDTSLSVNVWVDTPNDSEDRAKESVARVLMTSLAGGLDAEVGPSWLNPTE
QAVWPIEETLAVASLAFQGLNAHSEEESSDHENGAAGARTGGDFSVRAMA
DAITAPDVLQMVFERIAQKRRIA*
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mRNA from alignment at Ecto-sp8_S_contig10278:328..2722+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10278.460.1 ID=mRNA_Ecto-sp8_S_contig10278.460.1|Name=mRNA_Ecto-sp8_S_contig10278.460.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2395bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10278:328..2722+ (Ectocarpus species8 EcLAC_412)
AACCCTGGTGTCAAGCGCCTAAGGACCACATGGCGGATTCATCCGCTGGG TGTCAGTACGGTGTGGGAGGCAGACTGCATCTTCCTGGAAGCCTCTGTAG GCCAGTTTCTGGAGTGGGAGAAGTCGGCCGAACCGCTCTCTGCAGAGGGT GATAACCCTTTCAGGCACTACGATCGGTGAGAAACTGACGTACTGTAGTT TCGTCAAAACACCCTTTTTTGATGCTGCCCTCTTTTCACTTGTGATTTTC TCAGCGCTGAGAGGGCGCGTCCTGCCGGCAAATGCGACTGAGTTGGTGCA AAATTCGGCAACTTGCCCCCACCGAGCGCCGCCATCCCCGCCCCGTTTGC TTACGCCTGGTCCTGTTTCGTCTCAGGAATGCTCACTGGGCGTACGCGGA CTATAAGCACTTGAAGGTAGGTTCGACGCGTCATTCCAACGGGCGATGAT ACTGTACGTGTTGATCTTCTTGTCTGGCGGGTGTCCTAAAACGTCGTGGT ATTACAGCACTGACAAGAAGCATTTATTCACCGGTGCAGGCGAGACGATA AGACTCACCGCTCGCAGTTTGCTGCTACGGCGTTACTGCTCCACCCGTTA AGGAGCTCGAAGATGATTGGGCGAAGGCTCTAGAACCGACAATTGATTGG TCGACGCTGGGCTGCGAGAAAGCTGCGACGGACTCCACACTGTGGTTGGG CACGGGGGGCTCTCACACGCCTCTCCACTTTGACACCTATGGCGTCAATC TGGTGAGGCGGTGTAACTAGACTACCCTTGCACCGTACCAGTGTGCCTCG TACGTGACGTCAACCCCCTTCGCCGGCCAGCTCCTGGGCATAGATGTGCC TTGGTGGCGTACATGTTGAAGGACTCGGACGCTTGCGTTTCGGCTCATGC TTCTATAGTAGAGGTTCCTGTCGAAGGCCGTTATGGTTCAAGGGAAAACA CCGGCCTTATATCTGGCACCCGGCACAATTCAGAATATGAGAAAACTTGA ATATTCCATCTGTGCCAAGGATTTCTTCATCTGGGCAACCGGCCTAAAAA GGGGCCTGTACTGTACATGAGGATACAAACGTCGAAGTGTCGAGCCTAAA GAAATATGCTTCACGCTTGATGCCCAGGTGGCCCAACTGCACGGCAGAAA AAAATGGCTCCTCTACCCTCCAGCTGACACAACGGCCCTTGCGCCAACCC GGATACCGTACGAAGAGAGCAGTGTCTTCAGCCAGGTGGACGCCAGAGCG CCAGACCTTGTCAGGTGGGCTCTGAGGCCGTCGTGGGAAGCGTGTTGTGT GTAACCGCGGAGTGTTCCGCACAATGTACTGCCATCCGGCGCTTCGCTGA TATGCGTGCAATGTTTGGGGCGGTGCAAGAGTCTTTGCTGCGGCGAATCA ATAGTGTTCTCCGTTTGCGGTCCACCGGCGGATGCCCGTATGTGTCGTTT CGGGTCGGTGTGTTTTGTCCGTAGTGTTGGGACTTTTTACTATCGCTCAC AGCACGTGCACTTCCCCCTGTCGACAAATCCTCCTCGCAAGGTTTCCTCA GTTTGCAGAGGCGCATCCACTGGCGGTTACGCTTGAGCCAGGAGATGTCC TTTTCGTCCCGAAGCACTGGTGGCACTTTGTGGAGGCGACAGACACTTCG CTTAGCGTAAACGTTTGGGTTGACACCCCCAATGATTCGGAAGACCGTGC CAAAGAGAGTGTGGCGCGTGTGCTCATGACATCTCTTGCGGGCGGACTTG ATGCCGAGGTATGTGGTAATATTTGCCAGAGTGCGTGCGCAGGTGCACAA GATGGCCTGGTCACCCTTTCAGTTATTTTGGTTCAAAGCGGGTAACCATA GAGCTTCACATGTCGAGCGTCTTCCACTCAACAGAATCGCGGGTGGAATG CATACGGAGTACATATTTGCCATTCCACTTCGTTTTGATGCCGAACATTT ACTTGCTTTTGTTTTCAGGTTGGTCCGAGTTGGCTGAATCCTACGGAACA AGCGGTGTGGCCTATTGAGGAGACGCTGGCGGTTGCCAGCCTGGCTTTCC AAGGGCTGAATGCCCACTCGGAAGAAGAATCAAGTGATCATGGTGCGTGT CGTCCATGTCGCTACCGTGGTTGAAACAGCAGTTTGGAAAATCAAGCCAA GCGCATCTCTCCATTCATGCCAGCCCTTTTGTGTTTTCTTGCCGACGCCA CCCCTGAACTTCAAAGAAGTGATTGCTAACGAATTCTGTCCGCGCGCTTA CCGACCGTGAATTCCAGAAAATGGCGCCGCAGGGGCAAGGACGGGCGGCG ATTTTTCTGTGAGGGCGATGGCGGACGCTATCACGGCACCAGATGTGCTG CAAATGGTCTTCGAGAGGATAGCTCAGAAAAGAAGGATAGCATAG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10278:328..2722+

>mRNA_Ecto-sp8_S_contig10278.460.1 ID=mRNA_Ecto-sp8_S_contig10278.460.1|Name=mRNA_Ecto-sp8_S_contig10278.460.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=972bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10278:328..2722+ (Ectocarpus species8 EcLAC_412)
AACCCTGGTGTCAAGCGCCTAAGGACCACATGGCGGATTCATCCGCTGGG
TGTCAGTACGGTGTGGGAGGCAGACTGCATCTTCCTGGAAGCCTCTGTAG
GCCAGTTTCTGGAGTGGGAGAAGTCGGCCGAACCGCTCTCTGCAGAGGGT
GATAACCCTTTCAGGCACTACGATCGGAATGCTCACTGGGCGTACGCGGA
CTATAAGCACTTGAAGGAGCTCGAAGATGATTGGGCGAAGGCTCTAGAAC
CGACAATTGATTGGTCGACGCTGGGCTGCGAGAAAGCTGCGACGGACTCC
ACACTGTGGTTGGGCACGGGGGGCTCTCACACGCCTCTCCACTTTGACAC
CTATGGCGTCAATCTGGTGGCCCAACTGCACGGCAGAAAAAAATGGCTCC
TCTACCCTCCAGCTGACACAACGGCCCTTGCGCCAACCCGGATACCGTAC
GAAGAGAGCAGTGTCTTCAGCCAGGTGGACGCCAGAGCGCCAGACCTTGT
CAGGTTTCCTCAGTTTGCAGAGGCGCATCCACTGGCGGTTACGCTTGAGC
CAGGAGATGTCCTTTTCGTCCCGAAGCACTGGTGGCACTTTGTGGAGGCG
ACAGACACTTCGCTTAGCGTAAACGTTTGGGTTGACACCCCCAATGATTC
GGAAGACCGTGCCAAAGAGAGTGTGGCGCGTGTGCTCATGACATCTCTTG
CGGGCGGACTTGATGCCGAGGTTGGTCCGAGTTGGCTGAATCCTACGGAA
CAAGCGGTGTGGCCTATTGAGGAGACGCTGGCGGTTGCCAGCCTGGCTTT
CCAAGGGCTGAATGCCCACTCGGAAGAAGAATCAAGTGATCATGAAAATG
GCGCCGCAGGGGCAAGGACGGGCGGCGATTTTTCTGTGAGGGCGATGGCG
GACGCTATCACGGCACCAGATGTGCTGCAAATGGTCTTCGAGAGGATAGC
TCAGAAAAGAAGGATAGCATAG
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