mRNA_Ecto-sp8_S_contig1027.449.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: D8LIZ8_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ8_ECTSI) HSP 1 Score: 220 bits (561), Expect = 4.990e-71 Identity = 110/115 (95.65%), Postives = 111/115 (96.52%), Query Frame = 1
Query: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDWRNKASKKA 345
MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGEL+QDYGEDWRNK A
Sbjct: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELRQDYGEDWRNKVETAA 115
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: A0A835Z3W0_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W0_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.030e-48 Identity = 79/110 (71.82%), Postives = 94/110 (85.45%), Query Frame = 1
Query: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDWRNK 330
MP+LTFVARV+DGLLLVAS+D ++S DV RSQAKQI+K+LNPRS AKCSI S P +FHYMIEQGICYLTL +KGYPKRLAFLYLEE+H+ F+ ELQ+D+G DWR +
Sbjct: 1 MPLLTFVARVIDGLLLVASIDPVTESQEAADVYRSQAKQIIKQLNPRSEAKCSIVSEPMMFHYMIEQGICYLTLTDKGYPKRLAFLYLEELHEAFIEELQRDHGMDWRTQ 110
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: A0A6V1P6Q6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P6Q6_HETAK) HSP 1 Score: 163 bits (412), Expect = 2.400e-48 Identity = 80/114 (70.18%), Postives = 96/114 (84.21%), Query Frame = 1
Query: 1 MPVLTFVARVMDGLLLVASMDSGSDSAAT----VDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDWRNK 330
MP+LTFVARVMDGL+LVASMD+ S A +D+C+S AK+ILK+LNPRSVAKCSI+S ++FHYMIE GICYLTL +KGYPKRLAFLYLEEIH+ FV ELQ+D G +WR+K
Sbjct: 1 MPMLTFVARVMDGLILVASMDTSSMGDARGHEKIDMCKSDAKKILKKLNPRSVAKCSIDSGQFIFHYMIEDGICYLTLTDKGYPKRLAFLYLEEIHEAFVEELQRDEGSEWRSK 114
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: A0A067CJ44_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJ44_SAPPC) HSP 1 Score: 149 bits (375), Expect = 8.230e-43 Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 1
Query: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDWRN 327
MP+LTF+ARV DG++LVASM+S D +D + Q KQI+K+LN RS KCSIES PY FHY+IE+G CYLT ++K YPKRLAFLYLEEIH FV ELQ+D+G++WR+
Sbjct: 1 MPILTFIARVSDGMILVASMESAGDYHDNLDTYKQQGKQIMKKLNQRSPTKCSIESGPYCFHYLIEEGNCYLTFSDKNYPKRLAFLYLEEIHAGFVDELQRDHGDNWRD 109
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: A0A485KKL0_9STRA (Aste57867_8523 protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KKL0_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.340e-42 Identity = 67/109 (61.47%), Postives = 88/109 (80.73%), Query Frame = 1
Query: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDWRN 327
MP+LTF+ARV DG+LLVASM+S D + +D + Q KQI+K+LN RS KCSI+S Y FHY+IE+G+CYLTL++K YPKRLAFLYLE+IH F+ ELQ+D+G+ WR+
Sbjct: 1 MPILTFIARVSDGMLLVASMESAGDYSDNLDTYKQQGKQIMKKLNQRSPGKCSIDSGGYSFHYLIEEGVCYLTLSDKNYPKRLAFLYLEDIHAGFIDELQRDHGDSWRD 109
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: A0A3F2RPY3_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RPY3_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.330e-41 Identity = 67/109 (61.47%), Postives = 89/109 (81.65%), Query Frame = 1
Query: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDWRN 327
MP++TFVARV DG+LLVASM+S D+ +D + QAKQI+KRL+ RS KCSIES Y FHY++++G+CYLTLA++G+PKRLAFLYLEE+H FV EL++D G +WR+
Sbjct: 1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLMQEGVCYLTLADRGFPKRLAFLYLEEVHTGFVEELERDSGSNWRD 109
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: W2JJM8_PHYPR (Longin domain-containing protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2JJM8_PHYPR) HSP 1 Score: 147 bits (370), Expect = 1.580e-41 Identity = 68/109 (62.39%), Postives = 89/109 (81.65%), Query Frame = 1
Query: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDWRN 327
MP++TFVARV DG+LLVASM+S D+ +D + QAKQI+KRL+ RS KCSIES Y FHY+I++G+CYLTLA++G+PKRLAFLYLEE+H FV EL++D G +WR+
Sbjct: 1 MPIITFVARVSDGMLLVASMESIGDANGNLDTYKQQAKQIMKRLDQRSPTKCSIESGAYTFHYLIQEGVCYLTLADRGFPKRLAFLYLEEVHAGFVEELERDSGSNWRD 109
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: A0A6G0WBK5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBK5_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.890e-41 Identity = 67/109 (61.47%), Postives = 88/109 (80.73%), Query Frame = 1
Query: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDWRN 327
MP+LTF+ARV DG+LLVASM+S D + +D + Q KQI+K+LN RS AKCSI+S Y FHY+IE GICYLTL+++ YPKRLAFLYL++IH+ FV EL +D+G+ WR+
Sbjct: 1 MPILTFLARVSDGMLLVASMESAGDYSDNLDTYKQQGKQIMKKLNQRSPAKCSIDSGAYAFHYLIEDGICYLTLSDRQYPKRLAFLYLDDIHRAFVDELARDHGDSWRD 109
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: A0A7S3H6Z0_9STRA (Vesicle-trafficking protein SEC22b n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6Z0_9STRA) HSP 1 Score: 141 bits (356), Expect = 9.970e-40 Identity = 66/104 (63.46%), Postives = 87/104 (83.65%), Query Frame = 1
Query: 16 FVARVMDGLLLVASMDSGSDSAAT--VDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDW 321
++ARV+DGL+LVASMD G+ + +DV +SQAKQ+LK+LNPRS AK SIES PY+FHY+IE+GICYLTL +K YPKRLAFL+LEEI +EF +L+ +YG++W
Sbjct: 21 YIARVIDGLILVASMDHGTGAGNNQQMDVYKSQAKQLLKKLNPRSTAKMSIESNPYIFHYLIEKGICYLTLTDKSYPKRLAFLFLEEISREFESDLKSEYGDEW 124
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Match: K3X2R4_GLOUD (Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4782 RepID=K3X2R4_GLOUD) HSP 1 Score: 139 bits (350), Expect = 4.920e-39 Identity = 64/109 (58.72%), Postives = 87/109 (79.82%), Query Frame = 1
Query: 1 MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAKCSIESRPYVFHYMIEQGICYLTLAEKGYPKRLAFLYLEEIHQEFVGELQQDYGEDWRN 327
M ++TFVARV DG+LLVASM+S D+ +D + Q KQI+K+L+ RS KCSIES Y FHY+I++G+CYLTL+++ +PKRLAFLYLEEIH FV EL++D+G +WR+
Sbjct: 1 MAIITFVARVSDGMLLVASMESIGDANGNLDTYKQQGKQIMKKLDQRSPTKCSIESGSYTFHYLIQEGVCYLTLSDRSFPKRLAFLYLEEIHAGFVEELERDHGTNWRD 109 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1027.449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig1027.449.1 >prot_Ecto-sp8_S_contig1027.449.1 ID=prot_Ecto-sp8_S_contig1027.449.1|Name=mRNA_Ecto-sp8_S_contig1027.449.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=120bp MPVLTFVARVMDGLLLVASMDSGSDSAATVDVCRSQAKQILKRLNPRSVAback to top mRNA from alignment at Ecto-sp8_S_contig1027:1822..3511+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig1027.449.1 ID=mRNA_Ecto-sp8_S_contig1027.449.1|Name=mRNA_Ecto-sp8_S_contig1027.449.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=1690bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1027:1822..3511+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1027:1822..3511+ >mRNA_Ecto-sp8_S_contig1027.449.1 ID=mRNA_Ecto-sp8_S_contig1027.449.1|Name=mRNA_Ecto-sp8_S_contig1027.449.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=360bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1027:1822..3511+ (Ectocarpus species8 EcLAC_412)back to top |