mRNA_Ecto-sp8_S_contig10260.437.1 (mRNA) Ectocarpus species8 EcLAC_412
|
Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: D8LF26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF26_ECTSI) HSP 1 Score: 325 bits (833), Expect = 3.680e-107 Identity = 166/182 (91.21%), Postives = 169/182 (92.86%), Query Frame = 2
Query: 53 MPPHSGQRATGQTLASTGGRGLKRKAPNTPAGKAVASADPARLHGKTTTSRKPPPTSTGAKGGDKGKGSKPVEEGTGKGXXXXXXXGDIDDIFAGVKRLKEEKAEEEAARVAKKKKIKEDHKRRQANPFTGEGGPDKRWAWADEVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
M PHS QR TGQTLASTGGRGLKRKAPNTPAGKAVASADPARL GKTT+SRKPPPTSTGAKGGDKGKGSKP+EEGTGKG DIDDIFAGVKRLKEEKAEEEAARVAKKKKIKE+HKRRQANPFTGEGGPDKRWAWADEVKPVRFDDEGLPIYTW SLRIGQGGGTAACPFDCDCCF
Sbjct: 1 MAPHSEQRPTGQTLASTGGRGLKRKAPNTPAGKAVASADPARLQGKTTSSRKPPPTSTGAKGGDKGKGSKPIEEGTGKGKAKGKVKSDIDDIFAGVKRLKEEKAEEEAARVAKKKKIKEEHKRRQANPFTGEGGPDKRWAWADEVKPVRFDDEGLPIYTWESLRIGQGGGTAACPFDCDCCF 182
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: A0A2D4C8L2_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8L2_PYTIN) HSP 1 Score: 71.6 bits (174), Expect = 1.090e-10 Identity = 49/111 (44.14%), Postives = 66/111 (59.46%), Query Frame = 2
Query: 311 GDIDDIFAGVKRLKEE---------KAEEEAARVAKKKK--IKEDHKRRQA---NPFTGEG-GPDKRWAWADEVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
GDIDD+F +K K+E + EE R A+K++ + ++ KR +A N +G PD R PVR+D++GLPIYT ASL+IG+GG TA CPFDC CCF
Sbjct: 106 GDIDDLFQSLKTKKQESEKAAELKKRDEELQKRKARKEREQLDDEIKRLEAQNTNVTAMQGQNPDPR--------PVRYDEDGLPIYTEASLQIGKGGDTADCPFDCWCCF 208
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: A0A1V9ZBJ6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZBJ6_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 3.930e-10 Identity = 40/89 (44.94%), Postives = 54/89 (60.67%), Query Frame = 2
Query: 332 AGVKRLKEEKAEEEAARVAKKKKIKEDHKRRQANPFTGEGGPDKRWAWADEVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
A +KRL +E+AE +A R K +K++ +HK + + +PVR+D +GLPIYT A+LRI QGG TA CPFDC CCF
Sbjct: 78 AELKRLDQERAEMQAYRK-KLEKLENEHKAKNND--------------TSNPQPVRYDADGLPIYTEAALRINQGGDTADCPFDCWCCF 151
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: A0A067BYC5_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BYC5_SAPPC) HSP 1 Score: 68.9 bits (167), Expect = 5.860e-10 Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 2
Query: 323 DIFAGVKRLKEEKAEEEAARVAKKKKIKEDHKRRQANPFTGEGGPDKRWAWADEVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
D A KRL +E+AE+ A R K +KI+ ++K + ++ + +PVR+D +GLPIYT ASLRI QGG TA CPFDC CCF
Sbjct: 108 DSAAEQKRLDDERAEKLAYRK-KLEKIENEYKTKHSD--------------SSNPQPVRYDADGLPIYTAASLRINQGGDTADCPFDCWCCF 184
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: A0A3F2RN39_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RN39_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.320e-10 Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 2
Query: 482 EVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
+ +PVR+D++GLPIYT ASL IG+GGGT CPFDC CCF
Sbjct: 166 DARPVRYDEDGLPIYTEASLHIGKGGGTKDCPFDCWCCF 204
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: A0A3R7H044_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H044_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.440e-10 Identity = 27/39 (69.23%), Postives = 33/39 (84.62%), Query Frame = 2
Query: 482 EVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
+ +PVR+D++GLPIYT ASL IG+GGGT CPFDC CCF
Sbjct: 167 DARPVRYDEDGLPIYTEASLHIGKGGGTKDCPFDCWCCF 205
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: A0A5D6Y0I8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0I8_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.920e-10 Identity = 43/106 (40.57%), Postives = 60/106 (56.60%), Query Frame = 2
Query: 314 DIDDIFAGVKRLKEEK--AEEEAARVAKKK---------KIKEDHKRRQANPFTGEGGPDKRWAWADEVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
+IDD+F +K K+E+ AEE+ R A K +++E K+ +A K E +PVR+D++G+PIYT +LRI QGG TA CPFDC CCF
Sbjct: 108 EIDDLFQSLKAQKKEQVAAEEKEQRDANKALAKQQQEKLRLEEQIKKLEAQNTNSTAMTGKN----PEARPVRYDEDGMPIYTEEALRINQGGDTADCPFDCWCCF 209
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: A0A0P1B5W0_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B5W0_PLAHL) HSP 1 Score: 68.9 bits (167), Expect = 7.820e-10 Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 2
Query: 314 DIDDIFAGVKRLKEEK-AEEEAARVAKKKKIKEDHKRR-----QANPFTGEGGPDKRWAWADEVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
+IDD+FA +K K +K EE ++AK+ K + + K R Q + + +PVR+D++GLPIYT A+L+IG+GG T CPFDC CCF
Sbjct: 99 EIDDLFAILKTKKRKKNIAEENQKLAKEVKERCEKKERERLQQQIKKLEAQNTNSTACGLNPDPRPVRYDEDGLPIYTEAALQIGKGGNTQDCPFDCWCCF 199
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: T0QJ30_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QJ30_SAPDV) HSP 1 Score: 68.2 bits (165), Expect = 1.080e-9 Identity = 42/92 (45.65%), Postives = 55/92 (59.78%), Query Frame = 2
Query: 323 DIFAGVKRLKEEKAEEEAARVAKKKKIKEDHKRRQANPFTGEGGPDKRWAWADEVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
D A KRL +E+AE+ A R K +KI+ ++K + ++ + PVR+D +GLPIYT ASLRI QGG TA CPFDC CCF
Sbjct: 108 DTAAEQKRLDDERAEKLAYRK-KLEKIENEYKMKHSD--------------SSNPVPVRYDADGLPIYTAASLRINQGGDTADCPFDCWCCF 184
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Match: G4ZRM9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZRM9_PHYSP) HSP 1 Score: 66.2 bits (160), Expect = 1.170e-9 Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 2
Query: 482 EVKPVRFDDEGLPIYTWASLRIGQGGGTAACPFDCDCCF 598
+ +PVR+D++GLPIYT ASL+IG GG T CPFDC CCF
Sbjct: 81 DPRPVRYDEDGLPIYTEASLQIGNGGNTKDCPFDCWCCF 119 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10260.437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10260.437.1 >prot_Ecto-sp8_S_contig10260.437.1 ID=prot_Ecto-sp8_S_contig10260.437.1|Name=mRNA_Ecto-sp8_S_contig10260.437.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=183bp MPPHSGQRATGQTLASTGGRGLKRKAPNTPAGKAVASADPARLHGKTTTSback to top mRNA from alignment at Ecto-sp8_S_contig10260:3434..6592- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10260.437.1 ID=mRNA_Ecto-sp8_S_contig10260.437.1|Name=mRNA_Ecto-sp8_S_contig10260.437.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=3159bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10260:3434..6592- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10260:3434..6592- >mRNA_Ecto-sp8_S_contig10260.437.1 ID=mRNA_Ecto-sp8_S_contig10260.437.1|Name=mRNA_Ecto-sp8_S_contig10260.437.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=549bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10260:3434..6592- (Ectocarpus species8 EcLAC_412)back to top |