mRNA_Ecto-sp8_S_contig1026.435.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig1026.435.1
Unique NamemRNA_Ecto-sp8_S_contig1026.435.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: A0A6H5JZJ1_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZJ1_9PHAE)

HSP 1 Score: 884 bits (2284), Expect = 3.240e-313
Identity = 640/759 (84.32%), Postives = 659/759 (86.82%), Query Frame = 1 
Query:  214 MHSSRHGDRRYHPQPQREHQPGQDNQHAASPSAVSSWGVTYLLQSAKRGWQRHKSPHVASLDAVNNCLDVTDAATSRLQERVDLTEGAAVGAIEVAFVAAAAAQNIVRFTLLGHPVRKFALIAESGRSAAELCQALDRQVGVSVRGMEDLPDAVFLRGGDQRTAQALEAGIPNLSRPEVQAYIVRLLFQDSFHEFVSDLSEMFSHVQTHLPVPTSTPVRTSASDPRAAXXXXXXXXXXHGGSGEDSPCGGRQADDIAHGGNGGRDSGVLNEGRRVSVGSFNGEEVVSTGGGSRAVGGEERLRGEGDPVAGSGXXXXXXXXXXXXXXXXXXXXXXXXGRGGGRESHSAKPLGARGSRRGSQQRDDGTGGTGPGGAIDGVEDDIRTAAGSPCRGGVPPAPHARRAKRPATEEAXXXXXXXXXXXXXXXXXXXXXXXX----TQQRPAXXXXXXXXXXXXXXXXX-----------RECGVGGDTSGFTQSLASGDGKGTNGSRSSGXXGGD-KAPSRRGPVSRTGAGEAGTVVASARGVASSGRAAREGSGGQQVTGTGANGGGAGHPKASGNENSKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRQGDTMPGVTPIMSPVTSSGRAPGLWTTLKKMWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRLDGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFIESMFAR 2442
            MHSS HGDRR+HPQPQREHQPGQDNQH ASPSAVSSWGVTYLLQSAKRGWQRHKSPHVASLDAVNNCLDVT+ ATSRLQERVDL EGA VGAIEVAFVAAAAAQNIVRFTL GHPVRKFALIAE GRSAAELCQALDR+ GVSVRGMEDLPDAVFLRGGD+RTAQALEAGIPNLSRPEVQAYIVRLLFQDSFHEFVSDLSEMFSHVQTHLPVPTS  +RTSASDP AA          HGGSGEDSPCGGRQADDI HGGNG RDSG+L+ GR V VGSFNGEEVV+ GGGSRAVG EER+ GEG  VAGS XXXXXXXXXXXXXXXXXXXXXXXX   GGRES S KP GARGSRRGSQQR+DGTGGTGPGG+ D   DDIRTAAGSP RGGVP  PHA+R+KRPATEEAXXXXXXXXXXXXXXXXXXXX        TQ+RPAXXXXXXXXXXXXXXXXX           RECGVGGDTSGFTQSL  GD  GTN      XX    KAPS RGP SRTG GE   VVASARGV+SSGRAAREGSGGQQVTGT A GGG G PKAS N NSKTSA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RQ DTMPGV  +MSPVTSSGRAPGLW TLKK+WSEVNKHRSSWAFRKGVDP TAPGYLDVVKHPIDLEGIRKRLDGPVVHYT+KAMLQDDLELMCRNAMLYNDE TEYHRVAEDLLRFI+SMFAR
Sbjct:    1 MHSSSHGDRRHHPQPQREHQPGQDNQHVASPSAVSSWGVTYLLQSAKRGWQRHKSPHVASLDAVNNCLDVTETATSRLQERVDLAEGATVGAIEVAFVAAAAAQNIVRFTLPGHPVRKFALIAECGRSAAELCQALDRK-GVSVRGMEDLPDAVFLRGGDRRTAQALEAGIPNLSRPEVQAYIVRLLFQDSFHEFVSDLSEMFSHVQTHLPVPTS--MRTSASDPPAAAAAGPS----HGGSGEDSPCGGRQADDIDHGGNGSRDSGILSGGRGVCVGSFNGEEVVAAGGGSRAVGVEERVHGEGASVAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRESLSGKPPGARGSRRGSQQRNDGTGGTGPGGSTDRAVDDIRTAAGSPWRGGVPLPPHAQRSKRPATEEAXXXXXXXXXXXXXXXXXXXXARGAAKGSTQRRPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRECGVGGDTSGFTQSLVGGDDTGTNSXXXXXXXXXXXKAPSGRGPASRTGPGETEPVVASARGVSSSGRAAREGSGGQQVTGTCAKGGGVGQPKASRNGNSKTSARKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RQRDTMPGV--LMSPVTSSGRAPGLWMTLKKIWSEVNKHRSSWAFRKGVDPATAPGYLDVVKHPIDLEGIRKRLDGPVVHYTSKAMLQDDLELMCRNAMLYNDEGTEYHRVAEDLLRFIKSMFAR 749
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: D7FQF0_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQF0_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 1.470e-111
Identity = 261/278 (93.88%), Postives = 263/278 (94.60%), Query Frame = 1 
Query: 1612 TSGFTQSLASGDGKGTNGSRSSGXXGG-DKAPSRRGPVSRTGAGEAGTVVASARGVASSGRAAREGSGGQQVTGTGANGGGAGHPKASGNENSKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRQGDTMPGVTPIMSPVTSSGRAPGLWTTLKKMWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRLDGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFIESMFAR 2442
            +SGFTQSLASGDGKGTNGSRSS XX   DKAPSRRGPVSRTG GEAGTVVASARGVASSGRAAREGSGGQQVTGTGAN    G PKASGN NSKTS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRQGDTMPGVTPIMSPVTSSGRAPGLWTTLKKMWSEVNKHRSSWAFRKGVDPT APGYLDVVKHPIDLEGIRKRLDGPVVHYT+KAMLQDDLELMCRNAMLYNDE TEYHRVAEDLLRFIESMF R
Sbjct:  107 SSGFTQSLASGDGKGTNGSRSSXXXXXXDKAPSRRGPVSRTGGGEAGTVVASARGVASSGRAAREGSGGQQVTGTGANXXXXGQPKASGNGNSKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRQGDTMPGVTPIMSPVTSSGRAPGLWTTLKKMWSEVNKHRSSWAFRKGVDPTMAPGYLDVVKHPIDLEGIRKRLDGPVVHYTSKAMLQDDLELMCRNAMLYNDEGTEYHRVAEDLLRFIESMFIR 384
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: A0A1V9ZPV9_9STRA (Histone acetyltransferase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZPV9_9STRA)

HSP 1 Score: 100 bits (248), Expect = 2.090e-18
Identity = 49/101 (48.51%), Postives = 65/101 (64.36%), Query Frame = 1 
Query: 2125 GRAPG-LWTTLKKMWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRLDGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFI 2424
            GR PG L   L+ +W  ++ HRS+W F + VD T    YLD+VK PIDL  I+KR++  V  Y NKA  + DL+LMC N MLYN  ET Y++ A+DL  +I
Sbjct:  360 GREPGSLKAQLQTLWKSLSNHRSAWPFHEPVDTTLVIDYLDIVKKPIDLSAIQKRIEDNV--YPNKAAFKADLDLMCENCMLYNSSETNYYKAAKDLQEYI 458
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: A0A1V9ZLF8_9STRA (Histone acetyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLF8_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 3.720e-16
Identity = 46/100 (46.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query: 2128 RAPG-LWTTLKKMWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRLDGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFI 2424
            R PG L   L+ +W  ++ HRS+W F + VD      YLD+VK P+DL  I KR+D     Y NKA  + DL LMC N MLYN  ET Y++ A+DLL ++
Sbjct:  407 REPGSLKAQLQALWKSLSNHRSAWPFHEPVDTKLVTDYLDIVKTPVDLTSIHKRIDEN--GYANKAAFKADLMLMCDNCMLYNSSETNYYKAAKDLLEYV 504
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: A0A067CY31_SAPPC (Histone acetyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CY31_SAPPC)

HSP 1 Score: 90.9 bits (224), Expect = 2.670e-15
Identity = 45/100 (45.00%), Postives = 61/100 (61.00%), Query Frame = 1 
Query: 2128 RAPG-LWTTLKKMWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRLDGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFI 2424
            R PG L   L+ +W  ++ HRS+W F + VD      YL++VK PIDL  I KR++     Y NKA  + DL LMC N MLYN  +T Y++ A+DLL F+
Sbjct:  406 REPGSLKAQLQTLWKTLSNHRSAWPFHEPVDTRLVTDYLEIVKTPIDLTAIAKRIEENA--YANKAAFKADLVLMCDNCMLYNSSDTNYYKAAKDLLEFV 503
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: A0A7S2CZX1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CZX1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.790e-11
Identity = 38/104 (36.54%), Postives = 59/104 (56.73%), Query Frame = 1 
Query: 2143 WTT----LKKMWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRLDGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFIESMFAR 2442
            W+T    L+ +W EV +H +SW FR+ V+      YL ++K PIDL  I++RLD     Y ++ ML+ DL  M  N   YN + T + + A+ L   IE +F++
Sbjct:    6 WSTMIGQLRTIWKEVERHDASWPFREPVNTDEVGDYLSIIKDPIDLSLIKRRLDDEF--YKSRDMLKADLIRMIENCKTYNGQRTVFFKEADRLGACIEKLFSQ 107
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: A0A7S0TIL8_HEMAN (Histone acetyltransferase n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TIL8_HEMAN)

HSP 1 Score: 75.9 bits (185), Expect = 8.120e-11
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 1 
Query: 2128 RAPGLWTTLKKMWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRL-DGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFIESMFAR 2442
            +A  L TTL ++   + KH  SW FR+ V P   P Y  V+K P+DL  ++KRL DG    Y  K +   D+ LMC N   YN +E+ Y+  A  L R+++  F R
Sbjct:  282 KAEDLRTTLTEVHGNMMKHEQSWPFREAVSPEDVPDYHTVIKDPVDLSLMQKRLTDG---FYKTKEIFLADVALMCDNCRTYNPKESVYYECAVHLQRYVDGEFRR 384
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: A0A2P6N965_9EUKA (Transcription factor GTE8-like n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N965_9EUKA)

HSP 1 Score: 73.9 bits (180), Expect = 1.380e-10
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 1 
Query: 2125 GRAPGLWTTLKKMWSEVNKHRSSWAFRKGVDPT--TAPGYLDVVKHPIDLEGIRKRLDGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFIESMF 2436
            G++   + +L+KM  ++ KH  SW F + VDP   + P Y  ++KHP+DL  I+ +LD  V  YT      +D+ L  RNAM YN  ET+ + +A+ LL + E  F
Sbjct:  106 GQSMSAFESLRKMIEKMIKHEMSWPFCQPVDPVALSIPDYPSIIKHPMDLGTIQSKLDMNV--YTAPEQFANDITLTFRNAMFYNQPETDVYFMADRLLSYFEKSF 209
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: A0A2G8XTP3_TOXGO (Histone lysine acetyltransferase GCN5-A n=1 Tax=Toxoplasma gondii COUG TaxID=1074873 RepID=A0A2G8XTP3_TOXGO)

HSP 1 Score: 70.9 bits (172), Expect = 6.860e-10
Identity = 38/99 (38.38%), Postives = 55/99 (55.56%), Query Frame = 1 
Query: 2128 RAPGLWTTLKKMWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRLDGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFI 2424
            RA  L   +  + S + KH SSW FR+ V  + AP Y +VV+ PID+  ++KR       Y  K   Q+DL LM  N  +YN  +T Y++ A++L  FI
Sbjct:  134 RAASLKAQIAALLSTLEKHSSSWPFRRPVSVSEAPDYYEVVRKPIDISTMKKRNRNG--DYRTKEAFQEDLLLMFDNCRVYNSPDTIYYKYADELQAFI 230
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Match: A0A663F413_AQUCH (Bromo domain-containing protein n=2 Tax=Accipitrinae TaxID=8955 RepID=A0A663F413_AQUCH)

HSP 1 Score: 70.5 bits (171), Expect = 8.120e-10
Identity = 38/90 (42.22%), Postives = 49/90 (54.44%), Query Frame = 1 
Query: 2149 TLKKMWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRLDGPVVHYTNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLR 2418
            TL  +W  +  HR S  F K V    APGY DVVK P+DL  I++RL     H  +    Q DL LM +NAM+YN      HR+A ++ R
Sbjct:  114 TLLSIWKMIASHRYSGPFLKAVSEKQAPGYRDVVKRPMDLTSIKRRLSKG--HIQSMIQFQRDLMLMFQNAMMYNSFNHHIHRMAMEMQR 201
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1026.435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZJ1_9PHAE3.240e-31384.32Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FQF0_ECTSI1.470e-11193.88Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A1V9ZPV9_9STRA2.090e-1848.51Histone acetyltransferase n=1 Tax=Thraustotheca cl... [more]
A0A1V9ZLF8_9STRA3.720e-1646.00Histone acetyltransferase n=1 Tax=Achlya hypogyna ... [more]
A0A067CY31_SAPPC2.670e-1545.00Histone acetyltransferase n=2 Tax=Saprolegnia TaxI... [more]
A0A7S2CZX1_9STRA2.790e-1136.54Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S0TIL8_HEMAN8.120e-1138.68Histone acetyltransferase n=3 Tax=Hemiselmis ander... [more]
A0A2P6N965_9EUKA1.380e-1037.74Transcription factor GTE8-like n=1 Tax=Planoprotos... [more]
A0A2G8XTP3_TOXGO6.860e-1038.38Histone lysine acetyltransferase GCN5-A n=1 Tax=To... [more]
A0A663F413_AQUCH8.120e-1042.22Bromo domain-containing protein n=2 Tax=Accipitrin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1026contigEcto-sp8_S_contig1026:5107..11141 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score359.0
Seed ortholog evalue5.4e-96
Seed eggNOG ortholog2880.D7FQF0
Model size2445
KEGG koko:K06062
KEGG Pathwayko04330,ko04919,ko05166,ko05203,map04330,map04919,map05166,map05203
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.histone acetyltransferase activity
EggNOG OGsCOG5076@1,KOG1472@2759
EC2.3.1.48
Cds size2235
COG Functional cat.BK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03021,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1026.435.1prot_Ecto-sp8_S_contig1026.435.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig1026 5317..11141 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143124.8191135-UTR-Ecto-sp8_S_contig1026:5106..53161681143124.8191135-UTR-Ecto-sp8_S_contig1026:5106..5316Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1026 5107..5316 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143124.828681-CDS-Ecto-sp8_S_contig1026:5316..55561681143124.828681-CDS-Ecto-sp8_S_contig1026:5316..5556Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1026 5317..5556 +
1681143124.836616-CDS-Ecto-sp8_S_contig1026:6234..63201681143124.836616-CDS-Ecto-sp8_S_contig1026:6234..6320Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1026 6235..6320 +
1681143124.844386-CDS-Ecto-sp8_S_contig1026:6705..68001681143124.844386-CDS-Ecto-sp8_S_contig1026:6705..6800Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1026 6706..6800 +
1681143124.852398-CDS-Ecto-sp8_S_contig1026:7300..74361681143124.852398-CDS-Ecto-sp8_S_contig1026:7300..7436Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1026 7301..7436 +
1681143124.8603415-CDS-Ecto-sp8_S_contig1026:7930..93671681143124.8603415-CDS-Ecto-sp8_S_contig1026:7930..9367Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1026 7931..9367 +
1681143124.8713956-CDS-Ecto-sp8_S_contig1026:10118..101771681143124.8713956-CDS-Ecto-sp8_S_contig1026:10118..10177Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1026 10119..10177 +
1681143124.8795872-CDS-Ecto-sp8_S_contig1026:10513..106461681143124.8795872-CDS-Ecto-sp8_S_contig1026:10513..10646Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1026 10514..10646 +
1681143124.8880134-CDS-Ecto-sp8_S_contig1026:11092..111411681143124.8880134-CDS-Ecto-sp8_S_contig1026:11092..11141Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1026 11093..11141 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig1026.435.1

>prot_Ecto-sp8_S_contig1026.435.1 ID=prot_Ecto-sp8_S_contig1026.435.1|Name=mRNA_Ecto-sp8_S_contig1026.435.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=745bp
MMHSSRHGDRRYHPQPQREHQPGQDNQHAASPSAVSSWGVTYLLQSAKRG
WQRHKSPHVASLDAVNNCLDVTDAATSRLQERVDLTEGAAVGAIEVAFVA
AAAAQNIVRFTLLGHPVRKFALIAESGRSAAELCQALDRQVGVSVRGMED
LPDAVFLRGGDQRTAQALEAGIPNLSRPEVQAYIVRLLFQDSFHEFVSDL
SEMFSHVQTHLPVPTSTPVRTSASDPRAAAAAAAAAAASHGGSGEDSPCG
GRQADDIAHGGNGGRDSGVLNEGRRVSVGSFNGEEVVSTGGGSRAVGGEE
RLRGEGDPVAGSGGRGKEKGKAHANRGRGGRGKERGRGRGGGRESHSAKP
LGARGSRRGSQQRDDGTGGTGPGGAIDGVEDDIRTAAGSPCRGGVPPAPH
ARRAKRPATEEAAAEAAMATTVTGGKGSARGAAKGSTQQRPAPPAKRART
QQQQQQQQQRECGVGGDTSGFTQSLASGDGKGTNGSRSSGGGGGDKAPSR
RGPVSRTGAGEAGTVVASARGVASSGRAAREGSGGQQVTGTGANGGGAGH
PKASGNENSKTSARKKKNRTAGAAPSAATSSGSSATVAAACKTFASAAPR
TGGGLGGGAAAAAVAAAGGRQGDTMPGVTPIMSPVTSSGRAPGLWTTLKK
MWSEVNKHRSSWAFRKGVDPTTAPGYLDVVKHPIDLEGIRKRLDGPVVHY
TNKAMLQDDLELMCRNAMLYNDEETEYHRVAEDLLRFIESMFAR*
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mRNA from alignment at Ecto-sp8_S_contig1026:5107..11141+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig1026.435.1 ID=mRNA_Ecto-sp8_S_contig1026.435.1|Name=mRNA_Ecto-sp8_S_contig1026.435.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6035bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1026:5107..11141+ (Ectocarpus species8 EcLAC_412)
AGCAAGCAATGGCAATCGCTACGATACCTATCACTATGGACGGGGTCATT
TCTTGTCGTTTGCAGAGTCGGTGGCTTGGCAGATAGAGCGATGCGCTCGT
GTACCGTATTGCTGGCGTTCCTCGACGCGTTTTGTCACCAAACCGTTATT
ACTTGATTCTGCTTCCATATCCATCCGGGCAGGGTTCGGACGCCCCGAAG
CAGTGCCAAAATGATGCATTCTTCTCGCCATGGCGATCGTCGGTATCATC
CGCAACCGCAGCGGGAGCACCAACCTGGACAAGATAATCAGCATGCTGCA
AGTCCGAGCGCGGTTTCCTCCTGGGGGGTGACTTACCTCCTCCAGTCGGC
AAAGCGAGGCTGGCAGAGGCACAAGTCTCCGCACGTGGCGTCGTTGGATG
CGGTCAACAACTGTCTCGACGTAACGGATGCTGCCACCTCCCGACTCCAG
GTTTTGGAGTTTTCTCGCGTAGTCCGTATTGCGGGTAAATTTTCACCTTC
GTGTCATGTGCACATGCAACAGGCCTCGGGTTCGGCCTCCATCTACGCTT
TTGTACCTTATGGTTAGGCGACTTTGTTCTGGTTTTTGGACTCAAGGCTA
TGTTGGTAGCTGAGTTGTGTCAGGTCCACGGCTTTGGTCGGCGTCTTCGG
AGTCTGGACGGTATCATTATTTGGTCCATCTACAGCGAAACTGTGTCGGC
AGTCCCTACATAGCCCCCGGACGCTCTCGGGCTGTTTTGATTGCTCTTGA
CAACATCGAACGAGCTGCAGCCCCCTCGTCCGATCATCCAACGGGTGGAA
GGTTGTCGGCTTGGCTTGCTTCGTCGGCAGAAAACCCCAGTGCATACACC
CCTGCTGCACCACTGGTCGACTTGAGTCAGGACCGGTTGCGCTGATTTTT
CTTTTGCCCTTCCTTCACCCGCAAGCACGGATGCGCCCTCGCTAGTAGGT
CATGTTGGTTTTGACAGTAGAGATCGTATGAGACTTTGAGACGTGGAACC
AAAGCAGAATGAAGGAAATGAACATCTCCCCATGACGGCCTCTTCTGGCA
TCCCCAGTGACTCTCTGATTTGTGCCATGCCCGCGTTGTCTACACCGTCT
GCCTTTACCGGTGAAAATCCATCCAAAGGAGCGGGTGGATCTGACAGAGG
GTGCGGCGGTGGGTGCGATCGAGGTGGCGTTTGTCGCCGCCGCGGCTGCT
CAGAACATTGTCAGGTGTGTGCGAAGGAGAGAAACAGAAAAAGACAGACG
GTGAGACACAAAGAGAGGCACAGACAGACAGACAGACAGGCAGGCAGGCA
GACAGGCGAAGAGCAGGAAGAAGGAGAGAGTTGTGATGTACCATGCCCGA
AAACTCTGGAAGCGCCGTGTGATGGAGCTACATGTAGTAGGTATGACGCG
TTTGATGTGATGCCGGGAATCAGGAGAGCTTGCTTCACATCAACAAGATA
GAGCGTAAGGCCCACATGGGTCCCGCCGGTCTATTCTGCTACATAGCCCT
AACCTTTCGAGTGCCGCTTCACGTCCTCCCTCTGGAACTTGCGCTTCCCT
GCACCTGCCTGGTTGTTGTGGATGCTGTGAACGCGACTGCCATGCGCAGG
TTCACCCTACTGGGGCACCCGGTTCGGAAGTTCGCACTCATTGCGGAGAG
TGGCCGGAGTGCCGCGGAGCTGTGCCAGGCGCTTGATCGACAAGGTGAGC
GCGATGACAACAACAACAACAACAACAACAGCGACAGCAGTGACACAATG
CTTATCAACACAACAACGTCCGCACGAACACCAACGAAGCCAACAAGCAC
GTCAAACTCCGGTAATTTTTAGTCGAAAATGTTTCGGCGATAATCCATCT
GGCATCTTCCCTCGCTCGTCCTTTGCAGTGCACCACGAGGCGTTTCTCCT
CCGGCAGTTGGTCTGTGTGGGCGTTGCTATTATAGTCGGCGTTGCTGTCT
ATTGGCAAGCGCAGGAACTCTTAATCCCTGCACTCACACCTGTGCCTACA
AGGAGCGTTGACTGGCGAAGGCATGCCCGTCATCAGGTTTCAAAATGAAT
AGCCTCTTCACATGGAGATATAGTTCCCTGGGGTTCTCTTCCCATACTCT
GCTGCCTCCTTGTTGTTGTTTTTGTTGAAAGCGCGGCGGAGGGGGGTAAC
TTGCCTTGTCGCCGCTCGTTCCGTGTTTCCCTGTGTTTGGCGAGTAGGCG
TTTCGGTGCGAGGCATGGAGGACTTGCCCGACGCGGTGTTCCTGCGTGGA
GGCGACCAGCGAACTGCGCAAGCCTTGGAGGCCGGGATTCCCAACCTGTC
GAGGCCAGAGGTGCAGGCTTACATCGTCAGGTGATCGATACGTAGTTAGG
ATCATATAGAGGAAGAGAGATAAAAGAAAAAGATTTGGTCTCCGTTTGTC
GGTTTGTTGTCGAGGGATTGCTTTGTGCGATTGGAAAGGGATATGCTGCT
GTGCCACCCCCTCAGAGGGGGTAGCTGACGCGGCGGCTTACGAAGCACCT
ATCAAAAACGCAGCCGTAATTCTCGTTGAAGCGAAAGCCAAAACTTATAT
TGCTTTGAATACCGAGCAATGGGTGTGCTGGGTGTAGTTGCCGGCCCCAG
TCTGTGGTACACTAGCGCCATAGGCATATAGCCTGACGCAATGCTCAAAG
TTGATATCTCTGTCTGCTTGACATTCGGGGGTATCCGATGCCTCACGCTG
ACAACCTCCTCACTTCGGATGTACTCGCGTCGTCCCTCCCTGTCGCAAAT
GCGTCTCCCGTCCCGTCCGAACATCATCGCCGAATACCGATGCCTACAAC
CGACGGGAAAAATGCCGAACAAAGGCTGCTGTTTCAGGACTCTTTCCATG
AGTTCGTGAGCGACCTCAGTGAGATGTTCTCTCACGTCCAGACCCACCTT
CCGGTACCGACCTCAACGCCGGTGCGAACATCAGCCAGCGACCCACGTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCCGCTTCTCACGGGGGAAGCGGTG
AGGATAGCCCCTGCGGGGGGAGACAAGCGGACGACATCGCTCATGGCGGC
AACGGCGGCCGTGATAGCGGCGTCTTGAACGAGGGTCGGAGGGTGTCTGT
GGGAAGTTTCAACGGAGAAGAAGTTGTTTCCACCGGCGGTGGAAGCAGAG
CAGTTGGTGGGGAAGAAAGACTTCGGGGAGAAGGAGATCCGGTGGCCGGC
AGTGGAGGAAGGGGCAAAGAGAAAGGGAAGGCGCACGCGAACAGAGGGAG
AGGTGGAAGAGGGAAAGAACGGGGGCGCGGCAGAGGAGGAGGAAGAGAAT
CCCATTCAGCAAAACCTTTAGGTGCTCGTGGATCTCGGCGAGGAAGCCAG
CAGAGGGATGACGGGACTGGCGGTACCGGTCCTGGTGGCGCAATAGATGG
AGTTGAGGATGACATTCGCACTGCAGCAGGGTCCCCTTGCCGAGGAGGAG
TACCCCCAGCTCCCCACGCACGACGCGCGAAACGGCCTGCCACAGAAGAA
GCAGCAGCAGAAGCAGCAATGGCGACAACAGTCACTGGTGGGAAGGGTAG
CGCGAGAGGGGCCGCCAAGGGATCCACTCAACAAAGACCAGCACCTCCCG
CCAAGCGCGCGCGCACGCAGCAGCAACAACAACAACAACAACAGAGAGAA
TGTGGCGTTGGCGGTGATACCTCAGGTTTCACTCAAAGCTTGGCGAGCGG
AGACGGCAAAGGCACCAACGGTAGTCGTAGCAGTGGTGGTGGTGGTGGTG
ACAAGGCGCCGAGCCGGAGGGGACCCGTAAGCCGGACAGGGGCTGGAGAA
GCGGGAACGGTTGTCGCCTCAGCACGGGGAGTGGCATCATCCGGACGGGC
TGCGAGGGAGGGAAGCGGAGGCCAGCAGGTGACGGGAACGGGTGCGAATG
GCGGCGGTGCGGGGCATCCGAAAGCATCGGGAAACGAGAACAGCAAAACG
AGCGCTCGAAAGAAGAAGAACAGGACTGCGGGCGCCGCCCCCTCTGCCGC
TACCTCCTCAGGCTCTTCCGCCACCGTCGCAGCCGCTTGCAAGACTTTCG
CTTCCGCTGCCCCTAGGACCGGTGGGGGTCTAGGTGGGGGTGCGGCGGCG
GCGGCAGTGGCGGCGGCCGGCGGCCGGCAGGGCGACACGATGCCTGGCGT
CACGCCTATCATGTCGCCGGTCACCTCCAGCGGGAGGGCGCCCGGGCTCT
GGACGACCCTGAAGAAGATGTGGTCTGAGGTCAACAAACACCGCTCCTCC
TGGGCGTTCCGGTGAGCTTGCTTGCCTGCGTGCGTGTGGGACGCGTAGCG
TTTGCTACGGTTTTAGTGCGACTAAAGACACCACTTCTGTGGCCGCCTGT
GTTGGGACAGCGCCTCTCTCTCCCGATCCGCCATCGTGCTCACGATCTCC
GCAGTCCGCTTTCGCGCTCTCCAGCCGAACGTCATGGGGGCCTTTTCGTG
TTCATGAATGTCCAGGGGGGGGGTACGTCTTCGTGACCCCGATCTTTCGG
TAGCGTCAGTTCGTTCCGTCTACGAATAAACGAGCTTGCCTTTTGGCTCA
CCCTGGCAAGGCGGGCAGAGGGTGGGGCAGGCAGATTCGATCTTGGCGGA
ATTCAATGTTCAACACACACCTTTTTCCGTGTGGCAACGGGTCTGATGAG
GTTGGATTGGACAGCATAGAGCCGCTGGCTCCCCTGGAGGCAATGTTCGT
GTCCATTCCATCTTGTTATTCGTGTGTCATTTCCTGTTATTTCTCGCTTT
CGGCAGGGTAACAAGAAACGGGGTTCACAAACACTTACACGATGGGCGCG
CCACTCCCGCCCTTAGCCTCTCACCACCCCGTGCGCAATGCCCTGCCGCC
ACTTTCGCACTATAAAAAATGCCACCGCAACACCAATCGGTGCGTGTGTT
GTGTAACGCGCGTGGACACACACCACCTGTAATTTTCTAAATCGCCGCTC
GACATTCGTCTCATTCGTTGGTTCTCCTGTGGTCCACGGCCGCGGGTGCC
TTGATGTCGCAGAAAGGGGGTGGACCCTACGACGGCACCCGGCTACCTGG
ACGTCGTCAAGCACCCCATCGGTGAGGGCAAACGGTGGCGATCATCGTTG
CTACTGCTGTGCTTCTGTCGCTTATCTTCGCCTAGGCACAAGTGGCAACA
CCCTCGACTACTATTCTCTTGCGTCATCACCCTCTGAAAGTGTCGGGCGC
GCCGGGCTCCGTCCAACCTGTGACGGCGTACACCCCCCCCCCCCGCCGCC
CGAAACGATCGTCGTCCTGCAGTGGGTACCAACACTGGCCTGTCCGTTCG
CCGCTGCTGTACCACCTTGTACTGCTGTGCCGTGCTTTCGTTGAGTTGAT
CGAAATCCACAACACTGTCATGTGTGTCCCATGCTGACGCTTTTTGCATG
CCCGCAGACCTTGAGGGCATCCGCAAGCGGCTCGACGGCCCGGTGGTGCA
CTACACCAACAAGGCGATGCTGCAAGATGACCTCGAGCTTATGTGCCGGA
ACGCCATGCTCTACAACGACGAAGAGACCGAGTACCACAGGTACAAGTGG
GCAGGTGTTCTGGCAGAGGACGGTTGGTTCCGAGTCTGCTGTGTTGGGCC
AATGTAACTCACGTAAAATTCTTATCGAGAAATAGTCCTGGTTGGCGCCT
GTCTCGAGTCAGGAATCAGTTTTTCCGCTCAAGAACTTGGGGTGGCTTCC
TAGCTTTTGTTGCGCTCCCTACACCCGCCCTCGCCACGCCGCACGTCATC
AAACCTAGTTGTTTCTCATCATACTGAAAAGCGGGAATGCTGTGTGTGCA
CATGAATTCCGTCGTGCCCACGGTGGGCAGGCGGCGGCTGGTGGTTCAAC
TGGGAACCCAAACCCCTGTTCCACCGACCTCCTCGCTACCCTGGCCGGTT
CTGCGGCAACCCCACCCCCTCGCCCCCCGTCCCGCGCCCCCACGATTGCT
ATGTTTTTGTGCTCGGGTGATGTTTCGTTTCGATAGAGTTGCGGAAGATC
TCTTGCGCTTCATCGAGTCAATGTTTGCCCGCTAG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1026:5107..11141+

>mRNA_Ecto-sp8_S_contig1026.435.1 ID=mRNA_Ecto-sp8_S_contig1026.435.1|Name=mRNA_Ecto-sp8_S_contig1026.435.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=2235bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1026:5107..11141+ (Ectocarpus species8 EcLAC_412)
ATGATGCATTCTTCTCGCCATGGCGATCGTCGGTATCATCCGCAACCGCA
GCGGGAGCACCAACCTGGACAAGATAATCAGCATGCTGCAAGTCCGAGCG
CGGTTTCCTCCTGGGGGGTGACTTACCTCCTCCAGTCGGCAAAGCGAGGC
TGGCAGAGGCACAAGTCTCCGCACGTGGCGTCGTTGGATGCGGTCAACAA
CTGTCTCGACGTAACGGATGCTGCCACCTCCCGACTCCAGGAGCGGGTGG
ATCTGACAGAGGGTGCGGCGGTGGGTGCGATCGAGGTGGCGTTTGTCGCC
GCCGCGGCTGCTCAGAACATTGTCAGGTTCACCCTACTGGGGCACCCGGT
TCGGAAGTTCGCACTCATTGCGGAGAGTGGCCGGAGTGCCGCGGAGCTGT
GCCAGGCGCTTGATCGACAAGTAGGCGTTTCGGTGCGAGGCATGGAGGAC
TTGCCCGACGCGGTGTTCCTGCGTGGAGGCGACCAGCGAACTGCGCAAGC
CTTGGAGGCCGGGATTCCCAACCTGTCGAGGCCAGAGGTGCAGGCTTACA
TCGTCAGGCTGCTGTTTCAGGACTCTTTCCATGAGTTCGTGAGCGACCTC
AGTGAGATGTTCTCTCACGTCCAGACCCACCTTCCGGTACCGACCTCAAC
GCCGGTGCGAACATCAGCCAGCGACCCACGTGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCCGCTTCTCACGGGGGAAGCGGTGAGGATAGCCCCTGCGGG
GGGAGACAAGCGGACGACATCGCTCATGGCGGCAACGGCGGCCGTGATAG
CGGCGTCTTGAACGAGGGTCGGAGGGTGTCTGTGGGAAGTTTCAACGGAG
AAGAAGTTGTTTCCACCGGCGGTGGAAGCAGAGCAGTTGGTGGGGAAGAA
AGACTTCGGGGAGAAGGAGATCCGGTGGCCGGCAGTGGAGGAAGGGGCAA
AGAGAAAGGGAAGGCGCACGCGAACAGAGGGAGAGGTGGAAGAGGGAAAG
AACGGGGGCGCGGCAGAGGAGGAGGAAGAGAATCCCATTCAGCAAAACCT
TTAGGTGCTCGTGGATCTCGGCGAGGAAGCCAGCAGAGGGATGACGGGAC
TGGCGGTACCGGTCCTGGTGGCGCAATAGATGGAGTTGAGGATGACATTC
GCACTGCAGCAGGGTCCCCTTGCCGAGGAGGAGTACCCCCAGCTCCCCAC
GCACGACGCGCGAAACGGCCTGCCACAGAAGAAGCAGCAGCAGAAGCAGC
AATGGCGACAACAGTCACTGGTGGGAAGGGTAGCGCGAGAGGGGCCGCCA
AGGGATCCACTCAACAAAGACCAGCACCTCCCGCCAAGCGCGCGCGCACG
CAGCAGCAACAACAACAACAACAACAGAGAGAATGTGGCGTTGGCGGTGA
TACCTCAGGTTTCACTCAAAGCTTGGCGAGCGGAGACGGCAAAGGCACCA
ACGGTAGTCGTAGCAGTGGTGGTGGTGGTGGTGACAAGGCGCCGAGCCGG
AGGGGACCCGTAAGCCGGACAGGGGCTGGAGAAGCGGGAACGGTTGTCGC
CTCAGCACGGGGAGTGGCATCATCCGGACGGGCTGCGAGGGAGGGAAGCG
GAGGCCAGCAGGTGACGGGAACGGGTGCGAATGGCGGCGGTGCGGGGCAT
CCGAAAGCATCGGGAAACGAGAACAGCAAAACGAGCGCTCGAAAGAAGAA
GAACAGGACTGCGGGCGCCGCCCCCTCTGCCGCTACCTCCTCAGGCTCTT
CCGCCACCGTCGCAGCCGCTTGCAAGACTTTCGCTTCCGCTGCCCCTAGG
ACCGGTGGGGGTCTAGGTGGGGGTGCGGCGGCGGCGGCAGTGGCGGCGGC
CGGCGGCCGGCAGGGCGACACGATGCCTGGCGTCACGCCTATCATGTCGC
CGGTCACCTCCAGCGGGAGGGCGCCCGGGCTCTGGACGACCCTGAAGAAG
ATGTGGTCTGAGGTCAACAAACACCGCTCCTCCTGGGCGTTCCGAAAGGG
GGTGGACCCTACGACGGCACCCGGCTACCTGGACGTCGTCAAGCACCCCA
TCGACCTTGAGGGCATCCGCAAGCGGCTCGACGGCCCGGTGGTGCACTAC
ACCAACAAGGCGATGCTGCAAGATGACCTCGAGCTTATGTGCCGGAACGC
CATGCTCTACAACGACGAAGAGACCGAGTACCACAGAGTTGCGGAAGATC
TCTTGCGCTTCATCGAGTCAATGTTTGCCCGCTAG
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