mRNA_Ecto-sp8_S_contig102509.418.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: D7G4B4_ECTSI (Ubiquitin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B4_ECTSI) HSP 1 Score: 120 bits (302), Expect = 9.330e-31 Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 10 STGVFLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAFR 219
+ GVFLD ALERLGLN+RERCDMVT WLPQLESS FNVIYFV+VERYE+AARLT+ P PDV IR+FMAFR
Sbjct: 343 AAGVFLDVALERLGLNVRERCDMVTCWLPQLESSRFNVIYFVEVERYEQAARLTIVPTPDVTIRVFMAFR 412
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: D7FJP3_ECTSI (Ubiquitin fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP3_ECTSI) HSP 1 Score: 106 bits (264), Expect = 2.360e-28 Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 1
Query: 58 MRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAFR 219
MRERCDMVTYWLPQLESSAFNVIYFV+VERYEKAARLT+ PAPDV IRIFMAFR
Sbjct: 1 MRERCDMVTYWLPQLESSAFNVIYFVNVERYEKAARLTIEPAPDVTIRIFMAFR 54
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: A0A2V2CDL3_9FIRM (Uncharacterized protein n=1 Tax=Clostridia bacterium TaxID=2044939 RepID=A0A2V2CDL3_9FIRM) HSP 1 Score: 75.1 bits (183), Expect = 6.260e-15 Identity = 33/73 (45.21%), Postives = 49/73 (67.12%), Query Frame = 1
Query: 1 PRPSTGVFLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAFR 219
P P T FL+ AL +LGL E + + YWLPQ+E +A+N+I F + Y AA+LT+ P PD ++R+FMA++
Sbjct: 104 PGPETAAFLENALAQLGLTRTEANEFIIYWLPQMEQNAYNLISFQS-DAYTDAAKLTITPQPDTLLRVFMAWK 175
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: A0A1Q6RH43_9FIRM (Uncharacterized protein n=3 Tax=Oscillospiraceae TaxID=216572 RepID=A0A1Q6RH43_9FIRM) HSP 1 Score: 73.9 bits (180), Expect = 1.680e-14 Identity = 32/69 (46.38%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 13 TGVFLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAFR 219
T FL+ AL +LGL RE + + YWLPQ++ + +N+I F +RY +AA+LT+ PAPD ++R+FMA++
Sbjct: 106 TAAFLEDALAQLGLTRREANEFIVYWLPQMQENPYNLIAFQS-DRYTQAAKLTIDPAPDTLLRVFMAWK 173
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: UPI001F47E5A1 (hypothetical protein n=1 Tax=Pseudoflavonifractor phocaeensis TaxID=1870988 RepID=UPI001F47E5A1) HSP 1 Score: 73.2 bits (178), Expect = 3.260e-14 Identity = 34/66 (51.52%), Postives = 48/66 (72.73%), Query Frame = 1
Query: 22 FLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAFR 219
FL+ AL +LGL RE + + YWLPQLES+ +N+I F E Y ARL+V PAPD+++R+FMA++
Sbjct: 108 FLEDALAQLGLTRREANEFIVYWLPQLESNPYNLISFQG-EAYTSHARLSVTPAPDILLRVFMAWK 172
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: A0A174QBY5_FLAPL (Uncharacterized protein n=1 Tax=Flavonifractor plautii TaxID=292800 RepID=A0A174QBY5_FLAPL) HSP 1 Score: 71.2 bits (173), Expect = 5.460e-14 Identity = 32/69 (46.38%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 13 TGVFLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAFR 219
T FL+ AL+RLGL RE + + YWLP+LE + +N++ F E Y +A LT+ PAPD +IR+F+A++
Sbjct: 44 TAAFLEDALDRLGLTEREADEFIIYWLPKLEGNPYNLLSF-QTEAYTSSAVLTIDPAPDTLIRVFLAWK 111
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: A0A4R0RJ76_9APHY (Uncharacterized protein n=1 Tax=Steccherinum ochraceum TaxID=92696 RepID=A0A4R0RJ76_9APHY) HSP 1 Score: 73.9 bits (180), Expect = 1.070e-13 Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = 1
Query: 22 FLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAFRWV 225
+LD L LGL++ R D +TYWLP L + + FV E YE+AA LTV+PAPDV++R+FM F+ V
Sbjct: 334 YLDACLRALGLHVAARSDFITYWLPSLLKHEYVALRFVPQESYEQAAPLTVSPAPDVVVRVFMIFQGV 401
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: A0A1Y3WXB7_9FIRM (Uncharacterized protein n=5 Tax=unclassified Flavonifractor TaxID=2629267 RepID=A0A1Y3WXB7_9FIRM) HSP 1 Score: 71.6 bits (174), Expect = 1.430e-13 Identity = 33/70 (47.14%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 10 STGVFLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAFR 219
+T FL+GAL RLGL +E + + YWLP++E + +N+I F E Y +A+LT+ PAPD +IR+FMA++
Sbjct: 110 NTADFLEGALARLGLTEQEANEFIIYWLPKMEHNPYNLISFQQ-ETYTNSAQLTIDPAPDTLIRVFMAWQ 178
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: A0A8H3DYU7_9AGAM (Hypothetical protein n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A8H3DYU7_9AGAM) HSP 1 Score: 73.2 bits (178), Expect = 1.930e-13 Identity = 34/72 (47.22%), Postives = 42/72 (58.33%), Query Frame = 1
Query: 1 PRPSTGVFLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAF 216
PR ++D L LGL+ R +TYWLP L AF + F+ YEKAA LT+APAPDV R+FM F
Sbjct: 295 PRDKVTAYIDDVLLALGLHAEARTSFITYWLPDLSKHAFIALRFLPQNEYEKAAPLTIAPAPDVTTRVFMLF 366
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Match: R6AXV6_9CLOT (Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 TaxID=1262775 RepID=R6AXV6_9CLOT) HSP 1 Score: 72.8 bits (177), Expect = 2.720e-13 Identity = 34/69 (49.28%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 13 TGVFLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYEKAARLTVAPAPDVMIRIFMAFR 219
T FL+ ALE+LGLN RE + + +WLP +E + +NVI F + Y +AA+L V PAPD +IR+FMA++
Sbjct: 340 TAAFLETALEKLGLNRREANEFIVFWLPLMEQNPYNVISF-QADCYTQAAKLEVEPAPDTVIRVFMAWQ 407 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102509.418.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig102509.418.1 >prot_Ecto-sp8_S_contig102509.418.1 ID=prot_Ecto-sp8_S_contig102509.418.1|Name=mRNA_Ecto-sp8_S_contig102509.418.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=75bp PRPSTGVFLDGALERLGLNMRERCDMVTYWLPQLESSAFNVIYFVDVERYback to top mRNA from alignment at Ecto-sp8_S_contig102509:54..278- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig102509.418.1 ID=mRNA_Ecto-sp8_S_contig102509.418.1|Name=mRNA_Ecto-sp8_S_contig102509.418.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=225bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102509:54..278- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig102509:54..278- >mRNA_Ecto-sp8_S_contig102509.418.1 ID=mRNA_Ecto-sp8_S_contig102509.418.1|Name=mRNA_Ecto-sp8_S_contig102509.418.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=225bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102509:54..278- (Ectocarpus species8 EcLAC_412)back to top |