mRNA_Ecto-sp8_S_contig10227.371.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10227.371.1
Unique NamemRNA_Ecto-sp8_S_contig10227.371.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: D7FU23_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU23_ECTSI)

HSP 1 Score: 538 bits (1385), Expect = 1.960e-189
Identity = 260/299 (86.96%), Postives = 283/299 (94.65%), Query Frame = 1
Query:    1 TALLVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESCASSIFDTEGGSSSAVFNPGGEMEQEVSTTTW-SDERGWCVFFEASAVDIVDGERDPEDYILLNMYWYPGGTANASTTCVSEEGEWDSHSETVIVFLRDSDTGILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTRR 894
            + LLVYNAV++  NPSTSFVLSN+VY+YPDTYVCL  FFGCDD+ LEE CASS+FDTEGGSS+AVFNPGG++EQE++TT + +DERGWCV FE SAVDIVDGERDPEDYILLNMYWYPGGTANASTTC+SEEGEW+SHSE+V +FLRDSDTGILSAGIQV YSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALE SSA+YKDKRTDNITGIASPYAWLSMEIAQ+TDSLEEITEINPLEIAELFGNVGGFWDLLL+LWPIFFISASRQDPHLK RNFKKSVTRGS+ VVDL+RR
Sbjct:   30 SGLLVYNAVKKSKNPSTSFVLSNNVYRYPDTYVCLYNFFGCDDMALEEFCASSVFDTEGGSSTAVFNPGGDLEQEIATTAYLTDERGWCVSFETSAVDIVDGERDPEDYILLNMYWYPGGTANASTTCISEEGEWESHSESVFMFLRDSDTGILSAGIQVAYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALETSSAIYKDKRTDNITGIASPYAWLSMEIAQTTDSLEEITEINPLEIAELFGNVGGFWDLLLMLWPIFFISASRQDPHLKVRNFKKSVTRGSEVVVDLSRR 328          
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: D8LMD2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD2_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.130e-98
Identity = 158/296 (53.38%), Postives = 211/296 (71.28%), Query Frame = 1
Query:    1 TALLVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESCASSIFDTEGGSSSAVFNPGGEMEQEV-STTTWSDERGWCVFFEASAVDIVDG-ERDPE---DYILLNMYWYPGGTANASTTCVSEEGEWDSHSETVIVFLRDS---DTGILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRG 864
            ++L++Y A+ ++NNPS SF +SN+VY+YPD +VCL   +GCD  +LEE C  S   T  G++SAVF PGGE EQ +      + E GWCV FE S +    G ER+     DY+LL+MYWYPGGT + S TCV E   W+ HSE + V L+DS   ++G++S GIQVPYSC+T+ SSSH FTY+G+G+T E++L E+  A+ KAL +S+A +KDK       I  PYA LS++  Q  +SLE ITE +P ++AE+FGNVGGFWDLL+L+WPIFF++ASRQDPHLK RNFKKSV +G
Sbjct:   30 SSLILYQALGKRNNPSVSFEVSNTVYEYPDIWVCLYGEYGCDSWELEEECMESAQLTGWGNTSAVFYPGGEYEQTIPGVGMLTPEDGWCVEFETSTISQFLGQERNASYYLDYLLLDMYWYPGGTESDSNTCVVEG--WEPHSEWMYVKLKDSGYPESGLVSTGIQVPYSCITNVSSSHSFTYVGMGVTIEERLGEEPVATNKALSVSTATHKDKVN---AAIDKPYAQLSLQFQQEPNSLEVITENDPFDLAEMFGNVGGFWDLLMLVWPIFFVAASRQDPHLKPRNFKKSVAKG 320          
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: A0A6H5K474_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K474_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 3.850e-95
Identity = 158/307 (51.47%), Postives = 208/307 (67.75%), Query Frame = 1
Query:    1 TALLVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESCASSIFD--TEGGSSSAVFNPGGEMEQEVSTTT-WSDERGWCVFFEASAVDIVDG-ERDPE---DYILLNMYWYPGGTANASTTCVSEEGEWDSHSETVIVFLRDSDTGILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSD--RVVDLTRR 894
            ++ L+Y AV ++NNP  S  LSN+V++YPD +VCL   +GCD+ +LEE C +S     T  G SSAV+ PGG  EQE+      +   GWCV F+ S +    G ERD +   DY+LL+MYWYPGG    STTCV E   W +H + + VFL D   G +S GIQVPYSC+T+ SSSH  TY+GIG+T EDKL ++   + KAL +S+A  KD+       I  PYA LS+++ Q  +SLE ITE++PL++AE+FGNVGGFWDLL+++WPIFF++ASRQDPHLK RNFKKSV +G    RV D T R
Sbjct:   70 SSYLLYKAVRKRNNPDASIELSNTVFEYPDVWVCLYVDYGCDEWELEEECMTSATANRTGWGHSSAVYYPGGVYEQEIHVEEKLTPNNGWCVEFQTSKITRFLGRERDAKYYLDYLLLDMYWYPGGLEVDSTTCVVEG--WKTHKQWMYVFLNDPVLGQVSTGIQVPYSCITNVSSSHSHTYVGIGVTTEDKLGQEPIVNNKALSVSTATVKDEVNP---AIVKPYAQLSLQVQQEPNSLEVITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFKKSVNKGLGGLRVGDSTHR 371          
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: A0A6H5L518_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L518_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 1.850e-93
Identity = 153/319 (47.96%), Postives = 203/319 (63.64%), Query Frame = 1
Query:   10 LVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESCASSIFDTEGGSSSAVFNPGGEMEQEVSTTT--------------------WSDERGWCVFFEASAVDIVDG-ERDPE---DYILLNMYWYPGGTANASTTCVSEEGEWDSHSETVIVFLRD-SDTGILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTR 891
            L Y A E+   P TSF+L+N VYK+PD ++CL   +GCD+L+LEE C +S + TEGG  +AVF P  +++QE   TT                      D RG CV F  SA     G ERDP    DYILL+MYW PGGT+  STTCV +  EW  H E V  FL D  D   +S G+ + YSC+T+ S++H F  MGIGLT++ K  +DD +SYKAL  +  ++K+    NIT   +PYA LS+E+ Q  DS E ITE NP E AE+FGN+GGFWDLLL+LWP+ F++A++QDPHLK R+FKKSV RG++R   +++
Sbjct:   69 LFYKAAEKAKAPDTSFLLTNEVYKFPDLWICLYVNYGCDELELEEKCVNSAWTTEGGVPNAVFYPRVQLDQEQEITTEQLQIEAIPENTDVDSEGNSLEDGRGKCVIFRTSAATAFVGQERDPHEFLDYILLDMYWNPGGTSGKSTTCVPDGVEWTDHREWVYGFLSDPDDPSAISTGVHLSYSCITNTSNTHTFNTMGIGLTQQKKFMDDDKSSYKALFTNFGVHKNVVNPNIT---TPYAHLSLEMKQQFDSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVAAAQQDPHLKPRSFKKSVVRGAERAASVSK 384          
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: D8LMD1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD1_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 2.280e-93
Identity = 150/295 (50.85%), Postives = 204/295 (69.15%), Query Frame = 1
Query:    1 TALLVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESCASSIFD--TEGGSSSAVFNPGGEMEQEVSTT-TWSDERGWCVFFEASAVD-IVDGERDPE---DYILLNMYWYPGGTANASTTCVSEEGEWDSHSETVIVFLRDSDTGILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRG 864
            ++ L+Y AV ++ NP  S  LSN+V++YPD +VCL   +GCD+ +LE  C +S     T  G+SSAV+ PGG  EQE+      +   GWCV F+ S +   +D ERD +   DY+LL+MYWYPGG    S TCV E   W +H++ + VFL D ++  +S GIQVPYSC+T+ SSSH FTY+GIG+T EDKL ++   + KAL +S+A  KD+       I  PYA LS++  Q  +SLE ITE++PL++AE+FGNVGGFWDLL+++WPIFF++ASRQDPHLK RNF KSVT+G
Sbjct:  102 SSYLLYTAVRKRENPDASIELSNTVFEYPDIWVCLYVAYGCDEWELENECMTSATGNRTGWGNSSAVYYPGGVYEQEIHVEGKLTPNNGWCVEFQTSKITRFLDRERDAKYYLDYLLLDMYWYPGGLEADSNTCVVEG--WKTHNQWMYVFLNDPESERVSTGIQVPYSCITNVSSSHSFTYVGIGVTIEDKLGQEPIVNNKALSVSTATVKDEVNP---AIVKPYAQLSLQFQQEPNSLEIITEVDPLDLAEMFGNVGGFWDLLMIMWPIFFVAASRQDPHLKPRNFTKSVTKG 391          
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: A0A6H5JN97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN97_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 1.080e-90
Identity = 148/295 (50.17%), Postives = 205/295 (69.49%), Query Frame = 1
Query:    1 TALLVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESCASSIFD--TEGGSSSAVFNPGGEMEQEVSTT-TWSDERGWCVFFEASAVDIVDGE-RDPE---DYILLNMYWYPGGTANASTTCVSEEGEWDSHSETVIVFLRDSDTGILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRG 864
            ++ L++ AV +++ P +S  LSN+V++YPD +VCL   +GCD+L+LEE C +S     T  G+SSAV+ PGGE EQE+      + + GWCV F+ S +    GE RD     D++LL+MYWYPGG    STTCV E   W +H++ + VFL D   G +S  + VPYSC+T+ SSSH FTY+GIGLT E KL ++   S KAL +S+A  K +       I  PYA LS+++ Q+ +S E ITE++PL++AE+FGNVGGFWDLL+++WPIFF++ASRQDPHLK RNFK+SVT+G
Sbjct:   30 SSYLLHKAVRKRDAPESSIELSNTVFEYPDIWVCLYADYGCDELELEEECMTSATANMTGWGNSSAVYYPGGEYEQEIHVEGRETPDHGWCVEFQTSKITRFLGEERDASRFLDHLLLDMYWYPGGLETDSTTCVIEG--WKTHNQWMYVFLNDPALGQVSTRVPVPYSCITNVSSSHSFTYVGIGLTTEIKLGQEPIVSNKALSVSTATVKHEVNP---AIVKPYAQLSLQVQQAPNSHECITEVDPLDLAEMFGNVGGFWDLLMIIWPIFFVAASRQDPHLKPRNFKESVTKG 319          
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: D8LNQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ3_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 1.250e-90
Identity = 153/319 (47.96%), Postives = 196/319 (61.44%), Query Frame = 1
Query:   10 LVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESCASSIFDTEGGSSSAVFNPGGEMEQEVSTTTWS--------------------DERGWCVFFEASAV-DIVDGERDPE---DYILLNMYWYPGGTANASTTCVSEEGEWDSHSETVIVFLRD-SDTGILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTR 891
            L Y A E+   P TSFVL+N VYKYPD ++C    +GCD  +LEE C  S + TEGG   AVF P  +++Q    TT                      D RG CV FE SA  D V  ERD     DYI L+MYWYPGG    STTCV+E  EW  H E V  FL D  D+  +S G  + YSC+T+ S++H+F  +GIGLT ++K  EDD +SYKAL  +  ++K+    N+T    PYA LS+E+ Q  DS E ITE NP E AE+FGN+GGFWDLLL+LWP+ F++A++QDPHLK R FKKSV RG++R   +T+
Sbjct:   46 LCYKAAEKAKAPDTSFVLTNVVYKYPDLWICPYVNYGCDAWELEEECVDSAWMTEGGEPDAVFYPREKLDQLHQVTTEERKIAAIPDLTNFDSEGNFVEDGRGHCVIFETSAATDFVGQERDSHEYLDYIHLDMYWYPGGKFGNSTTCVAEGVEWADHREWVYGFLSDPEDSTAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVT---MPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVTATQQDPHLKPRTFKKSVIRGAERAAGVTK 361          
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: D8LNS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS2_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 4.380e-89
Identity = 149/320 (46.56%), Postives = 195/320 (60.94%), Query Frame = 1
Query:   10 LVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESCASSIFDTEGGSSSAVFNPGGEMEQEVSTTTWS--------------------DERGWCVFFEASAVDIVDG-ERDPEDYI----LLNMYWYPGGTANASTTCVSEEGEWDSHSETVIVFLRD-SDTGILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTR 891
            L Y A E+   P TSFVL+N VYK+PD ++CL   +GCD+ +LEE C  S + TEGG   AVF P  +++Q   TTT                      D RG CV F+ SA     G ERDP +Y+    L  MYWYPGG    STTCV +  EW  H E V  FL D  D   +S G  + YSC+T+ S++H+F  +GIGLT ++K  EDD +SYKAL  +  ++K+    N+T    PYA LS+E+ Q  DS E ITE NP E AE+FGN+GGFWDLLL+LWP+ F++ ++QDPHLK R FKKSV RG++R   +T+
Sbjct:   45 LCYKAAEKAKAPDTSFVLTNEVYKFPDLWICLFVNYGCDEWELEEGCVDSAWMTEGGVPDAVFYPRVKLDQLQETTTEELQIEAIPENTDYDSEGNYVEDGRGQCVIFKTSAATTFVGQERDPHEYLDYVHLDQMYWYPGGKFGNSTTCVVDGVEWADHREWVYGFLSDPEDPAAISTGFPLSYSCITNTSNTHIFNTLGIGLTNQNKFMEDDISSYKALFTNFGVHKNTVNPNVT---MPYAHLSLEMKQQADSWEIITESNPYEFAEMFGNIGGFWDLLLILWPLCFVATTQQDPHLKPRTFKKSVIRGAERAAGVTK 361          
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: D7FU22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU22_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 1.920e-87
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1
Query:  490 MTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTRR 894
            MTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTRR
Sbjct:    1 MTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTRR 135          
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Match: D7FXH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH8_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 5.910e-87
Identity = 150/314 (47.77%), Postives = 196/314 (62.42%), Query Frame = 1
Query:   10 LVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESCASSIFDTEGGSSSAVFNPGGEMEQEVST-----TTWSDE---------RGWCVFFEASAVDIVDG-ERDPE---DYILLNMYWYPGGTANA-STTCVSEEGEWDSHSETVIVFLRD-SDTGILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEISSALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGNVGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTR 891
            LVY  VE+  +P+TS  LSN VY YPD +VC    +GCDD+ LE  C  S ++TE G  +A+F      +Q  +       TW D          RG CV F+ SA     G ERDP+   DYILL+MYWYP G     STTCV +  EW+ H E V  FL D  D  ++S  +Q+ YSC+TS S+SHVF  +GIGLT + K   DD +SYKA+ I+S +YKD+   +IT    PYA LSME+ Q  DS E ITE +P E AE+ GN+GGFWDL+L+LWP+FF++AS+ +P+LK RNF KSVTR  +R   +T+
Sbjct:   33 LVYKTVERTKSPNTSVELSNVVYTYPDLWVCPYNQYGCDDITLELGCVESSWETEAGPPNAIFYNSEGTDQNATDPLEIEATWVDTSAIEGIVKGRGLCVEFKTSAATAFVGQERDPDEYLDYILLDMYWYPSGNETTDSTTCVEDGEEWEPHREWVYAFLTDPEDVTMVSTAVQLSYSCITSASTSHVFNSVGIGLTNQIKYAADDVSSYKAVSINSGVYKDQADADIT---KPYARLSMELKQQFDSWEIITEADPFEFAEILGNIGGFWDLILILWPLFFVAASQPEPNLKPRNFAKSVTRTVERASGITK 343          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10227.371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FU23_ECTSI1.960e-18986.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LMD2_ECTSI1.130e-9853.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K474_9PHAE3.850e-9551.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L518_9PHAE1.850e-9347.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMD1_ECTSI2.280e-9350.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JN97_9PHAE1.080e-9050.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ3_ECTSI1.250e-9047.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LNS2_ECTSI4.380e-8946.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FU22_ECTSI1.920e-87100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FXH8_ECTSI5.910e-8747.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10227contigEcto-sp8_S_contig10227:1380..6925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score62.4
Seed ortholog evalue4.2e-07
Seed eggNOG ortholog2880.D7FP33
Model size896
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.ubiquitin protein ligase activity
EggNOG OGsCOG5021@1,KOG0940@2759
Cds size894
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10227.371.1prot_Ecto-sp8_S_contig10227.371.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10227 1380..6925 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143121.0084715-CDS-Ecto-sp8_S_contig10227:1379..14451681143121.0084715-CDS-Ecto-sp8_S_contig10227:1379..1445Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10227 1380..1445 +
1681143121.022391-CDS-Ecto-sp8_S_contig10227:2061..22471681143121.022391-CDS-Ecto-sp8_S_contig10227:2061..2247Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10227 2062..2247 +
1681143121.0327194-CDS-Ecto-sp8_S_contig10227:2768..28521681143121.0327194-CDS-Ecto-sp8_S_contig10227:2768..2852Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10227 2769..2852 +
1681143121.0438597-CDS-Ecto-sp8_S_contig10227:3080..31571681143121.0438597-CDS-Ecto-sp8_S_contig10227:3080..3157Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10227 3081..3157 +
1681143121.0560963-CDS-Ecto-sp8_S_contig10227:4001..41161681143121.0560963-CDS-Ecto-sp8_S_contig10227:4001..4116Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10227 4002..4116 +
1681143121.0691638-CDS-Ecto-sp8_S_contig10227:5378..54711681143121.0691638-CDS-Ecto-sp8_S_contig10227:5378..5471Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10227 5379..5471 +
1681143121.0842445-CDS-Ecto-sp8_S_contig10227:5988..61331681143121.0842445-CDS-Ecto-sp8_S_contig10227:5988..6133Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10227 5989..6133 +
1681143121.1021924-CDS-Ecto-sp8_S_contig10227:6797..69251681143121.1021924-CDS-Ecto-sp8_S_contig10227:6797..6925Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10227 6798..6925 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10227.371.1

>prot_Ecto-sp8_S_contig10227.371.1 ID=prot_Ecto-sp8_S_contig10227.371.1|Name=mRNA_Ecto-sp8_S_contig10227.371.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=298bp
TALLVYNAVEQKNNPSTSFVLSNSVYKYPDTYVCLTYFFGCDDLDLEESC
ASSIFDTEGGSSSAVFNPGGEMEQEVSTTTWSDERGWCVFFEASAVDIVD
GERDPEDYILLNMYWYPGGTANASTTCVSEEGEWDSHSETVIVFLRDSDT
GILSAGIQVPYSCMTSESSSHVFTYMGIGLTKEDKLYEDDTASYKALEIS
SALYKDKRTDNITGIASPYAWLSMEIAQSTDSLEEITEINPLEIAELFGN
VGGFWDLLLLLWPIFFISASRQDPHLKGRNFKKSVTRGSDRVVDLTRR
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mRNA from alignment at Ecto-sp8_S_contig10227:1380..6925+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10227.371.1 ID=mRNA_Ecto-sp8_S_contig10227.371.1|Name=mRNA_Ecto-sp8_S_contig10227.371.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=5546bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10227:1380..6925+ (Ectocarpus species8 EcLAC_412)
ACGGCGCTCCTCGTGTACAATGCGGTGGAGCAGAAAAATAATCCGAGTAC ATCCTTCGTGCTATCGGTGAGTGTAGTACGTGCTGCGTTTTCCTACCGGC TGTTGTTTTCGCATAGGAGTAAAAATCACCACGCCATGTTCTACCGGACG CTGATTCCAAGGAGAGACAGGCATCAAACAAATGGGTTGTGTTCAAGACT ACACGGAATGTTTCGCGGACGAGATGGACTTGTACTTCCGAGTAGGGAAG CTGAACTCTTTCTCCGCAGGATGAACTCGTCCGAAAAGAGGTAGAGACGT ACTAATTCGGAGGTTCGTTCGTTCTTTGAAGGCGTGATTGGCCGAGGCTC ATTTTGGCCTCCAGGGCCAGACCTCAAGGCTTCTTAAAACTCATGGCCAT GCCACCCTGTCGCCTGTGCTTGTGTCCGTTTGCGCCCATTGGGTCAAACT TGGAATAACACGTACGCGTTTCGCGTGGAACGAATTCTGGGTGCTCATCC TGAACCACTCGGTTTCCGGAGTAGAAAAGGTACCCATCTCGAAAGGGATG CGTGGTCAAAGGTCAAACAAATAAGGCAAGGAGCAAGTGAGTCTTCCTCC GCACACACCTCCCGTACCCACAATTACGACCTGGCTCCCGCTGTCCGCCA CCGCACGTGTCTGTGTGTTTTTTTTTTCGCAGAACAGTGTTTACAAATAC CCAGACACGTACGTGTGTTTGACCTACTTCTTCGGCTGCGACGACCTCGA CTTGGAGGAGAGCTGTGCGTCTTCCATCTTCGACACGGAAGGGGGCAGCA GCTCGGCGGTCTTCAACCCCGGTGGGGAGATGGAGCAAGAAGTTTCCACC ACTACATGGTCAGACGAGGCGAGTCTTGTGTTGAGCTCCACCGTTGTCTG CTGTGCTTTTCCGCTTCTCTGTGTTGGTAACGTGCGTTTACTTTCCAAAC CCTTCTGGCCACTACGCAATTCCCCCGTAATGTACGGTGCTGGTCCTGAA GGCTGAGAAACCACTCTCTGGGCACACACTCAAGGCGTATGAGCCCGGAA CAAACAGGAAAGTTGTTGTGCGATTCATTGCGCAATCGGGAATGATACTT TGCGAAAAAAGGCAGTCAGGCAGAGAGCGTGAAAACTCTGGACACGAGGT TCTGATCGTGGGGGCAAAGCCGAAAGCAGTGAGCGGTGCCACGCGTTTCG TTCCATTTCCTCGGCGTTTCCTACCGGTAGGCTTGATTAATGACCACGGG CGGGCGAGGGTGAGGCATAAAGTTCATGTGAGCTGACGTAAAGTTCGTGC AAGATGACATAGAACTTCGTGTGAGATGACTACGGTGAATGGCAATTGAT CGTGAGCACGTTTGCGTCTGGTTGCCCTGCCTCTTTCAGAGGGGCTGGTG CGTTTTCTTCGAGGCTTCCGCTGTGGACATCGTAGACGGCGAGCGAGACC CGGAGGACTACATCCTCCTCAACGTGAGCAACGTATATTCCATGTGTGCC GTACTTCGGAACACCCATGATCATGTGTCCTTCCCAATAAACGTCGAACG ACAAGTCACGACGTATGCAGAAACGTCCTGCGCACTCACGAGTCCGAAAA CAGCGCTTCCAGTTGGGAGGACGGGCCTTCAACGGTGCTTGCTATGTATT TCAATCGAGTTTTTACGTTGATGGGCCTGCTATTTTGTCGTGTTTGAACA GATGTATTGGTATCCGGGCGGGACCGCGAACGCGTCGACGACGTGCGTTT CTGAGGAGGGCGAGTGGGATTCTCACAGGTGATGAACAACGTACCGCACG TTACACAAAGACCTGAAAACCTCTCATTAACTACTACCAAAGAGAGCTTG AATTACCGTCGTTAGTACCATCAGTGCTGTAGGCCATGCAAGAAGGTTCG GTGCAACCCAAAACGTTTCCAAGGCTATGTAGATGCGATGCGCACATTGC CGCCCCGCGTCCACCCTTGACCTTGCAGAAGGAAATCTTCAGACTTACCG GAAAGAGGTAGTCACATCAGAGGATATGTACAGATGGCACCCGCAGTGCA ACGTCTCGGGGCGAGGTTTGACTTTCCAATTGTGGGCCAAAATACCAGGG ATATTTTTATGTGTAGCTCGTTGCATAGGTTTCTGTCGTCCTGGCGCACC GTCCCGTCTTCTGGTCAACATCACGATGAACCTCATTCTTCCTTTTTTTA CTGCGTTTTTTTCACGACCATTGTTAGCTGTTGAAAAAGCTGCGCAGTGC ACGCAACGGAAAAAGCAACAGTTTCGTTCTTCCTGTCGCTCCGGGTTGTC AAAGTGCTCCTTACCCACCAATGGATATGATAACACGAGATGGAGAACAG CCGGAGTAGGTTGGAACACTACTATTATTATATTGAATGCTCCCCAACTC CACCTTTACTTGCTGGGGCTCATTTCCTTGTACTTCTTATGCCTCTTGAA CAGCATCGATCGGTTTGCCTGATAACCGGATGTTTCTGGTATTGTCGCCT AAGTTGCACCATTTTTGGTGCCGACCTCAGCCGTTGCCGCCAACTTTCCA CACGTAAGTATCCACCTCGATCTGCGGGCGCGACCTTCCTTGCGGTGCTG GTTCTCTCGCCCTCTCTCCCAGCGAGACCGTAATCGTGTTTTTGCGAGAC TCGGACACGGGCATCCTGTCGGCCGGCATCCAAGTCCCCTACAGCTGCAT GACCAGCGAGTCCAGCAGCCACGTCTTCACCTACATGGTGAGCAGAGCGG TCAAGTCTTCACGGCGTTACGTACTCCCGACCGGCCCTATCTCACGAGTT TCAGATAATCAACCTGCCCACGTCTGCCCAAAATGTGGTGGGGAGATGGG TCAGGGTACTCAAGTTGTTGCACGCGTTCGTTCTAAGCCATGTATCCAGC ACAGGTTGAGGCGATTCGTCGTCCCGAACTCTCCAGCAGAATCCCCTTCT AGACGTGTTCGTGGTCTTCAATCGCGTTTTATCAGGGTGTTCCACGGTGG TTGCTGTTTTGCCGCCTTACAACGACCGACTTCCGCACGTCGGATTCAAC AGCAGTGTTACCGTTAAAGATGTCACGGCCATGACCCAGTATATCCGCTT TGCTGCAGTATCACCCAAAATCTGTTCAACCGAAATGGCGACACAAAATG TTTCAAATGTCCCGGTGGCTCAGTGGCATACCCGCGGTATTCAGTTGGTG GGTTCATCCCCGAGTGCGCAGGTTTATTCCTTATGCTCCGTTTCTAACAT GTGCATTTTGTGTGTGTATGTGTGTTTTCTTTCTCAATTCTTGCGATGAG TTAATCAAATCGTCGAACAAAAATGTTGTTTTGTCTTCTTATTTTGTTTT TTGTGGGGGGGGGTAGAAGACTAGTCAAAATCTATCTGAACCTAGCTGTG GCTGGTGTTGTGTGCCATGCGTTTGACGGCGCCGTGGACCAACGCGTTGT GTGTTTCCTGTGGAAGGAAGCGCGAGGTGGCAGAACAGGAGTTTCACGAA AATAAGTATACGTTGGAGGTGGTTGTTTTCGCTACACGTGGATTAATGTA ACAAGCGGCTACCACGCGGCACAGAATCAATGGAAAACAATGTCGGGGAT GGCGATCTCATAGTTAACTTGCCTTGAAGGTTGACCGTATCCACCAAAGT GCGTGCCGCCATGGAATCATCCTGTTTTTCAACAAGTGCTTCAGGCTTTC TTCGCCGCTTTTTGTGTCGCCGTTCCTTGGTTCTTACCGTGAACCCCAAA ATTTCCATCGCTTCCAAACAAAACCCCCCATTCACCGTTTGAACGTCATC GCCGCATCGTTTTCTGATACCGCTTCGTCACCGCTAAAAAGAAATACCTC CCGCGGAGCAGCCTACTATCCCGATCGCTTTGTTCACAATCTGCTGCACT CCATCAATTGAAGACGAGTGCATTGAAGAGGCAGGTGCATGTTCTCCCCG CCCCGGGCTAACCGGACGTACTCCGCTCTCTCGTCTTGCGGCCGTACAGG GGATAGGGCTTACCAAGGAGGATAAGCTCTACGAAGACGACACCGCCTCG TACAAGGCTCTGGAGATATCGTCAGCTCTCTACAAAGACAAGGTTGAAGG TGGAGTCTCTGCTACCGTCTGATAATTACTCCAAAGCATGACAATGTAGT ACCCATCCATGTGCTACAAGAGGGGCTATCCCCCTTCTACTACTACACAG ACCTGATACCTGTTGGTGCGGTCGGTTGAATGTATCATGGACGTGGTGCC TGCTGCCTGCATACACCCGATTGCCGTCGTATGGTAGACTGAACAAAGAA ATGAAAGTCGTCAGAGTCCGGATGTCTTAACTACCCGGTACCGTTTTCAG GGTCAGGGCTTGAGGCTCCCACGTGAAACAGATTTCTAGCGGATCAACAT CCGGGGCCCGTTGCACACGGACTTATAGCTTATCGATGTCGGTGATGATT CCCTCGCCGAGAATGTAAACGTTCGTAGCCAGATATCCTGATGATGGAAG AGGGCAACTGACACGTATGGAACTTGACCGCCCCCCCCTTCTCCCTCACC CTCCCTACTCGTGTGAAACTACGTTTCCGTTTGGAATAACTTGCTCGTCT TCTGTTTAGAGGACCGACAACATTACCGGAATTGCGAGCCCTTACGCGTG GTTGTCTATGGAGATAGCGCAGTCAACGGATTCTCTGGAAGAGATTACGG AGATTAACCCTCTCGAGATCGCCGAGTTATTCGGCAACGTTGGCGGGTTC TGGGGTGAGTCGTGCTCTGCGTGCTCATTGATGTGGTAGTTCACGTTGGC TCACTAGAATAATTTACGAGCCCGACGAAAGGATTGTGTCAGAAATAAAC CAGCACAACCACGACGGAAGGGCGGAGAACATCGGTCAGGGAAGGTTTCC TTCGTGACGAACAAAGCACTGAAAGACTCGAGAGCACATCCAACGGTAAC TGCGCCAGCAACGCGGAGGGCCGACATGTTCACAACTTTCTTTCGCAGGC AAGGCAGCGCAGCTTGTACCGAAGAGCACATTTTCGAGTTGCGAAAAGAT ACCGACAGTGACAAATGTAGCAAGAGAAAGCCAGAGTCAGCGGCCACGGA CTGATGGCGGTCCGACACAAGTACACAGGCGAAACGTACAGAGTGAAGTA GTGAAAAAATGGCATAGCAGCAGGCAATGGGGTGAAGGGGCCAGAGAAAG GCAGGCATGTCGCAGACTAAATTCGCCAGACTGGTGTGCTCTACCTACGT TCGACATCGCCTCGGTTCTTCCTCCTCAGTTCTTCCTGGATTTCTTTGCC CCGATTGGATTCTCTTCGCGTTTGGAACCATGCCCTCACACTTTGTATAT TCGTTCCCTCACCTCGTCCTCCTCCTCTGATTGTTCCCTTTTCGTGATTC ACTCTCGGCTCTCGGCAGATTTGCTGCTCTTGCTGTGGCCAATATTTTTC ATCTCCGCATCGCGCCAGGACCCGCACCTCAAGGGCCGAAACTTCAAGAA ATCCGTCACCAGAGGGTCGGACCGTGTAGTCGATCTGACAAGGCGA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10227:1380..6925+

>mRNA_Ecto-sp8_S_contig10227.371.1 ID=mRNA_Ecto-sp8_S_contig10227.371.1|Name=mRNA_Ecto-sp8_S_contig10227.371.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=894bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10227:1380..6925+ (Ectocarpus species8 EcLAC_412)
ACGGCGCTCCTCGTGTACAATGCGGTGGAGCAGAAAAATAATCCGAGTAC
ATCCTTCGTGCTATCGAACAGTGTTTACAAATACCCAGACACGTACGTGT
GTTTGACCTACTTCTTCGGCTGCGACGACCTCGACTTGGAGGAGAGCTGT
GCGTCTTCCATCTTCGACACGGAAGGGGGCAGCAGCTCGGCGGTCTTCAA
CCCCGGTGGGGAGATGGAGCAAGAAGTTTCCACCACTACATGGTCAGACG
AGAGGGGCTGGTGCGTTTTCTTCGAGGCTTCCGCTGTGGACATCGTAGAC
GGCGAGCGAGACCCGGAGGACTACATCCTCCTCAACATGTATTGGTATCC
GGGCGGGACCGCGAACGCGTCGACGACGTGCGTTTCTGAGGAGGGCGAGT
GGGATTCTCACAGCGAGACCGTAATCGTGTTTTTGCGAGACTCGGACACG
GGCATCCTGTCGGCCGGCATCCAAGTCCCCTACAGCTGCATGACCAGCGA
GTCCAGCAGCCACGTCTTCACCTACATGGGGATAGGGCTTACCAAGGAGG
ATAAGCTCTACGAAGACGACACCGCCTCGTACAAGGCTCTGGAGATATCG
TCAGCTCTCTACAAAGACAAGAGGACCGACAACATTACCGGAATTGCGAG
CCCTTACGCGTGGTTGTCTATGGAGATAGCGCAGTCAACGGATTCTCTGG
AAGAGATTACGGAGATTAACCCTCTCGAGATCGCCGAGTTATTCGGCAAC
GTTGGCGGGTTCTGGGATTTGCTGCTCTTGCTGTGGCCAATATTTTTCAT
CTCCGCATCGCGCCAGGACCCGCACCTCAAGGGCCGAAACTTCAAGAAAT
CCGTCACCAGAGGGTCGGACCGTGTAGTCGATCTGACAAGGCGA
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