mRNA_Ecto-sp8_S_contig102238.366.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: A0A6H5JJG5_9PHAE (DMT protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJG5_9PHAE) HSP 1 Score: 121 bits (303), Expect = 5.900e-31 Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 1
Query: 1 GKTIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGL 183
GK IRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVA L
Sbjct: 100 GKIIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVASL 160
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: A0A835Z2R1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2R1_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 3.950e-10 Identity = 29/48 (60.42%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 16 SERSGLLVLATVPLVWGTYAPSVKYLYQMGE--SPPGLLFNFACYVVS 153
S + L VLATVP VWGTY PSVK++ +G PPGL FN ACY+VS
Sbjct: 37 SRAAALAVLATVPCVWGTYTPSVKFMESLGPLVQPPGLFFNAACYLVS 84
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: A0A7S2HES8_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HES8_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 9.980e-10 Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 1
Query: 16 SERS-GLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVAGL 183
+ER+ G+LVL TVPL WGTYAP VKY+Y++ PG +F+ YVV+ LT +A L
Sbjct: 108 NERALGILVLMTVPLSWGTYAPVVKYVYEINPPVPGFVFSAGYYVVASLTLLTLASL 164
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: A0A7S1FR69_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FR69_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 4.760e-9 Identity = 27/51 (52.94%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 28 GLLVLATVPLVWGTYAPSVKYLYQMGESP-PGLLFNFACYVVSVLTFAAVA 177
GLL+L +VP+VWGTYAP+V+YLY + + P PGL+F+ A Y ++ T + VA
Sbjct: 135 GLLILLSVPVVWGTYAPAVRYLYAVSDPPLPGLIFSAAYYSLASATLSIVA 185
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: A0A448ZQR1_9STRA (EamA domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQR1_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 1.220e-8 Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 1
Query: 13 RSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVV--SVLTFAAVAG 180
R GLLVLATVP+ WGT+ P+V+ +Y+ S P L+F+FA Y V SVL AA G
Sbjct: 136 RDYGKGLLVLATVPMAWGTFEPAVRLVYRYEPSXPPLVFSFAYYFVAASVLAIAAAXG 193
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: A0A7S4CPL9_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CPL9_9EUGL) HSP 1 Score: 58.2 bits (139), Expect = 1.590e-8 Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 1 GKTIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFN-----FACYVVSVLTFAA 171
G T S L VLA+VP VWGTYAP+V+Y+Y + PGL+F+ AC V+SVL F +
Sbjct: 146 GSTEPSRFLQLAVLASVPAVWGTYAPAVRYMYSLPLKVPGLVFSNLYYIVACLVMSVLLFVS 207
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: B7FRX7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRX7_PHATC) HSP 1 Score: 58.2 bits (139), Expect = 2.220e-8 Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 1
Query: 7 TIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVS 153
T R RSGLLVL TVP+ WGT+ P+V+YLY + PG +F+ Y+V+
Sbjct: 5 TDRERRSGLLVLLTVPVAWGTFEPAVRYLYTIDPPIPGFVFSTCYYLVA 53
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: B7FRX8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FRX8_PHATC) HSP 1 Score: 55.5 bits (132), Expect = 2.030e-7 Identity = 23/51 (45.10%), Postives = 34/51 (66.67%), Query Frame = 1
Query: 10 IRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLT 162
+ E GLLVL TVP+VWGTY P V++LY++ PG +F+ + ++ LT
Sbjct: 92 VTDETVGLLVLLTVPVVWGTYVPVVRFLYEIDPPIPGFVFSVCYFALASLT 142
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: A0A1Z5K2F7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2F7_FISSO) HSP 1 Score: 55.1 bits (131), Expect = 2.770e-7 Identity = 23/54 (42.59%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 1 GKTIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLT 162
GK + ++ G+ VLATVP+VWG+Y P VK LY++ PG +F+ A + V+ ++
Sbjct: 73 GKFLSEKQIGIFVLATVPVVWGSYVPVVKGLYEIDPPIPGFVFSTAYFAVAAVS 126
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Match: A0A7S4GI16_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GI16_9EUGL) HSP 1 Score: 55.1 bits (131), Expect = 2.810e-7 Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 31 LLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVSVLTFAAVA 177
L VL +VPLVWGTYAP+V+++Y + PG+ F+ Y+V+ L +AVA
Sbjct: 377 LAVLFSVPLVWGTYAPAVRFIYTLPVKVPGIFFSSLYYLVATLFLSAVA 425 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102238.366.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig102238.366.1 >prot_Ecto-sp8_S_contig102238.366.1 ID=prot_Ecto-sp8_S_contig102238.366.1|Name=mRNA_Ecto-sp8_S_contig102238.366.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=61bp GKTIRSERSGLLVLATVPLVWGTYAPSVKYLYQMGESPPGLLFNFACYVVback to top mRNA from alignment at Ecto-sp8_S_contig102238:42..224- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig102238.366.1 ID=mRNA_Ecto-sp8_S_contig102238.366.1|Name=mRNA_Ecto-sp8_S_contig102238.366.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=183bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102238:42..224- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig102238:42..224- >mRNA_Ecto-sp8_S_contig102238.366.1 ID=mRNA_Ecto-sp8_S_contig102238.366.1|Name=mRNA_Ecto-sp8_S_contig102238.366.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=183bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102238:42..224- (Ectocarpus species8 EcLAC_412)back to top |