mRNA_Ecto-sp8_S_contig10216.356.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10216.356.1
Unique NamemRNA_Ecto-sp8_S_contig10216.356.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A6H5K9K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K3_9PHAE)

HSP 1 Score: 281 bits (718), Expect = 9.180e-88
Identity = 158/357 (44.26%), Postives = 195/357 (54.62%), Query Frame = 1
Query:   10 WMEKEAKAPGMLLRLEEWGAEKYGKATAEEARKQRIQVMDAWLVAGLPVSRLDDIRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMKSQYYSISFDGTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAIEKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAGHDVNQDVLENFMQMRQFLAELMTTEGKDNKKARQLLRLVEDPIDGLHLQLQLAVVCDVGRVITKATYALESDKPMIEKAWDIVQEVVTLLGVDGEQLANPVLPNFE 1080
            W+E++ K+P MLLRLE WG   YG  T+E  R QRI+                                     YIPFL SEERLR+  VMK++ YS+SFDG+P+WHQECFG+M RI TEDLV+VQNLI LHLLE SMN+++IA E++DAI+ K  L R  C+AF+                                       I++D+A RLVSGL+ LLSQSF +R FWK KVGK WKS+NSVRWGA H+ NQD++ENF  MR FLAEL+T EGKDNK AR+LL                                           WDI+Q VVTLLG+DGEQ+ NP+L N E
Sbjct:  131 WLERKGKSPDMLLRLEAWGKSNYGTTTSELTRSQRIE-------------------------------------YIPFLESEERLRISAVMKNECYSVSFDGSPIWHQECFGVMVRICTEDLVIVQNLIRLHLLEGSMNADNIAVEVSDAIQDKAGLERAKCLAFV---------------------------------------IEVDMADRLVSGLRSLLSQSFANRAFWKQKVGKRWKSINSVRWGASHESNQDIMENFADMRLFLAELVTAEGKDNKTARRLL------------------------------------------VWDIMQTVVTLLGIDGEQITNPILSNME 369          
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A1X7TFE2_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TFE2_AMPQE)

HSP 1 Score: 152 bits (385), Expect = 1.250e-37
Identity = 97/341 (28.45%), Postives = 170/341 (49.85%), Query Frame = 1
Query:   79 GKATAEEARKQRIQVMDAWLVAGLPVSRLDDIRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMKSQYYSISFDGTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAIEKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAGHDVNQDVLENFMQMRQFLAELMT--TEGKDNKKARQLLRLVEDPIDGLHLQLQLAVVCDVGRVITKATYALESDKPMIEKAWDIVQEVVTLLGVD--------GEQLANPVLP 1071
            G + + E R  R +V++ +L AG+P+S+LD++R LL E  + +  SSH+  YIP LL +E+  +   ++ +  S+ FDGT     E   I+ R  +E   + Q L+ L +L  S+    +A E+  A+  +  +P    +AFM D AS N  ++    L + +  A  + C SH  N  GE+  +    + +   +++   S + R  W+ + GK+  + ++ RW +  +  + VLE F  +  F+ +L    T  K  +K + LL           L L+LAV  D G  I KATY LE D P+  + ++++  +   + V          ++LA+P +P
Sbjct:  152 GSSVSMEDRVYRAKVVEQFLYAGIPISKLDNLRNLLEENALRLTHSSHMMDYIPPLLKKEKQAVRQAIEGKNVSVCFDGTSRLG-EALAIVIRYCSE-WTIKQKLVRLSMLAKSLRGEEVAREVLSALSTELGIPSQKLLAFMRDCASVN--NVAVTTLSVMYPSAMDIGCFSHTLNRVGEKFHVPTLDKFMKHWEQMFKHSHKSRLMWRERTGKAIVTYSATRWWSKWECVKQVLELFGDVPDFIKDLALSDTAPKSKEKLQHLLLTSTK-----ELLLELAVTVDAGEPIVKATYKLEGDGPVALECYEVICSIKAAIQVSHLPNTYAIAKKLASPSMP 483          
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.990e-37
Identity = 98/320 (30.63%), Postives = 168/320 (52.50%), Query Frame = 1
Query:   76 YGKATAEEARKQRIQVMDAWLVAGLPVSRLDD--IRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMKSQYYSISFDGTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAIEKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAGHDVNQDVLENFMQMRQFLAELMTTEGKDNKKAR----QLLRLVED-PIDGLHLQLQLAVVCDVGRVITKATYALESDKPMIEKAWDIVQ 1014
            YG   +++ +  +I+ +   L A +P++ L +      L    V++  S HL ++IP +L EE+ ++   +  + Y++ FD TP +  ECFG+  R +     V Q ++ L +L+ SM ++ IA E+   +  +  L  D C A M DS + NL ++    L   F  A  + CLSH FNN G+++        +  +  LLS S   +  +K KVG    S    RWG+  D +  +  N+  + +F+A   + +   +K A+    +L+R+ +D     LHLQ+QLA++ DVGR +T AT  LE D+P+  K ++IV+
Sbjct:  177 YGDTLSDKDKLTQIKAVKGCLAAAIPLNALGNPVFGAFLAHFNVNLPHSGHLAKHIPLILEEEQAKVRGEIGDRPYALCFDATP-YLCECFGVGVRFIGSSGQVAQRVLRLSMLKKSMTASDIAGEVNRIVTHEYGLDPDKCRAIMGDSCAANLLAMDA--LAKLFRYAIVIGCLSHTFNNIGKQLSSLDLDAFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYVIAMNWPGVLEFIAAYESGDTDKSKAAKFMRDELVRVRDDNKTQSLHLQMQLALMVDVGRSVTSATIVLEGDEPLAHKTYNIVE 493          
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 5.540e-34
Identity = 94/343 (27.41%), Postives = 180/343 (52.48%), Query Frame = 1
Query:   76 YGKATAEEARKQRIQVMDAWLVAGLPVSRLDD--IRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMKSQYYSISFDGTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAIEKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAGHDVNQDVLENFMQMRQFLAELMTTEGKDNKKAR----QLLRLVEDPIDG-LHLQLQLAVVCDVGRVITKATYALESDKPMIEKAWDIVQEVVTLL--GVDG---EQLANPVL 1068
            YG   ++  +  +++++   L AG+P+  L+D  ++       +     SHL +++PFLL +E     + + +  Y++ FD TP +  ECFGI  R + ++  VVQ ++ + +L+ SM++  I  ++ D + ++  L    C+ FM D  + NL ++ + L    +  + G+ C SH+FNN G R+        +  L  LLS S + +  ++  VG +     + RWG+ ++ +  +  N+  + +F+    + + + +K A     +L R   D  D  L L++QLAV+ DVG+++T A   LE D+P++ +A+  +++  + L  G DG   E +A P L
Sbjct:    9 YGDTLSDRDKLLQVKLVAGCLSAGIPLHALEDPQMKAFFDFANIRAPGRSHLAEHVPFLLRKELDTTLSELGNGNYTVCFDATP-YRCECFGIGLRFINQNGQVVQRVLKIAMLKKSMSARDIVGQVNDTLGEEFNLRASRCIGFMLDGCAANLLAL-DSLTQHIYRKSVGIPCFSHLFNNIGTRLRFPDVDEFLGKLHTLLSHSPQAKALFREIVGVTDPPTPNHRWGSRYERDYLIAMNWPGVVKFIEAYKSNDDEKSKTATWLRSELARKRNDGKDQVLVLRMQLAVLVDVGKIVTAACIFLEGDEPLLHQAFSKIEKFRSQLELGNDGLFKEDVALPTL 349          
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A6H5KTX0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTX0_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 4.840e-31
Identity = 93/317 (29.34%), Postives = 160/317 (50.47%), Query Frame = 1
Query:   76 YGKATAEEARKQRIQVMDAWLVAGLPVSRLDD--IRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMKSQYYSISFDGTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAIEKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAGHDVNQDVLENFMQMRQFLAELMTTEGKDNKKAR----QLLRLVED-PIDGLHLQLQLAVVCDVGRVITKATYALESDKPMIEKAWD 1005
            YG   +++ +  +I+ +   L A +P++ L +      L    V++  S HL ++IP +L EE+ ++   +  + Y++ FD TP +  ECFG+  R +     V Q ++ L +L+ SM ++ IA E+   +  +  L  D C A M DS + NL ++    L   F  A  + CLSH FNN G+++        +  +  LLS S   +  +K KVG    S    RWG+  D +  +  N+  + +F+A   + +   +K A+    +L+R+ +D     LHLQ+QLA++ DVGR   K    +E  +  +E A D
Sbjct:  274 YGDTLSDKDKLTQIKAVKGCLAAAIPLNALGNPVFGAFLAHFNVNLPHSGHLAKHIPLILEEEQAKVRGEIGDRPYALCFDATP-YLCECFGVGVRFIGSSGQVAQRVLRLSMLKKSMTASDIAGEVNRIVTHEYGLDPDKCRAIMGDSCAANLLAMDA--LAKLFRYAIVIGCLSHTFNNIGKQLSSLDLDAFLGKMHTLLSHSAGAKALFKEKVGVRAPSTPGHRWGSRFDRDYVIAMNWPGVLEFIAAYESGDTDKSKAAKFMRDELVRVRDDNKTQSLHLQMQLALMVDVGRSAHKTYNIVERFRSKLELAED 587          
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A6H5JN03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN03_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 2.870e-30
Identity = 92/334 (27.54%), Postives = 166/334 (49.70%), Query Frame = 1
Query:   76 YGKATAEEARKQRIQVMDAWLVAGLPVSRLDD--IRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMKSQYYSISFDGTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAIEKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAGHDVNQDVLENFMQMRQFLAELMTTEGKDNKKARQLLR--LVEDPIDG----LHLQLQLAVVCDVGRVITKATYALESDKPMIEKAWDIVQEVVTLLGVDGEQL 1053
            YG   +   +  ++++    L AG+P+  L D  ++       + M   SHL ++IP LL  E     + +    Y++ FD TP +  ECFGI  R + +   VVQ+++ + +L  SM++  I  ++ D + ++  L    C+ FM D  + NL ++ + L    +  + G+ C SH+FNN G+R+     +  +  L  LLS S + +   +  VG +     + RWG+  + +  V  N   + +F+ E   +  +D  +    LR  L     DG    L L++QLAV+ DVG+++T     LE D+P++ KA+  +++  + L  D + L
Sbjct:    9 YGDTLSNRDKLLQVKLATGCLSAGIPLHALGDPQMKVFFDFANICMPGDSHLAKHIPVLLRTELDTALSELGDGNYTVCFDPTP-YRCECFGIELRFIDQKGQVVQHVLKIEMLTKSMSARDIVGQVNDTLSEEFCLKASRCIGFMLDGCTANLLAL-DSLTQHIYRRSLGVSCFSHLFNNIGKRLIFPDLEDFLGKLHTLLSHSPQAKALLREIVGVADPPTPNHRWGSRFERDYLVAMNSPGVVKFI-EAHKSNDEDKSRTAAWLRSELARKRDDGKYQVLVLRMQLAVLVDVGKIVTATCIFLEGDEPLLHKAFSKIEKFRSELEPDKDGL 339          
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A6H5JJR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR7_9PHAE)

HSP 1 Score: 103 bits (256), Expect = 2.520e-20
Identity = 86/328 (26.22%), Postives = 150/328 (45.73%), Query Frame = 1
Query:   82 KATAEEARKQRIQVMDAWLVAGLPVSRLDD--IRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMKSQYYSISFDGTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAIEKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAGHDVNQDVLENFMQMRQFLAELMTTEGKDNKKAR----QLLRLVEDPI-DGLHLQLQLAVVCDVGRVITKATYALESDKPMIE--KAWDIVQEVVTLLGV 1038
            ++ A++ +  +I+ +   L AG+P++ L +      L  L VD+  + HL ++IP +L EER+R                                            L +L+ SM ++ IA E+   +  +  L  + C A + DS + NL ++  ++    F  A  + CLSH FNN G+++        +  +  LL  S   +  +K KV     S    RWG+  D +  +  N+  + +F+A   + +   +K A+    +L+R  +D     L LQLQLA++ DVGR +T AT  LE D+P++   K ++IV+   + L V
Sbjct:  418 RSEAQKDKLTQIKAVKGCLAAGVPLNVLGNRVFGAFLAHLDVDLPSAGHLAEHIPLILEEERVR-------------------------------------------RLGMLKKSMMADDIAGEVNRIVTHEYSLDPNKCRAIIGDSCAANLLAMGALV--KLFRYAIVIGCLSHTFNNIGKQLSTPELGTFLGKMHALLLHSAGAKALFKEKVRVRAPSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYKSGDTDKSKAAKFMRDELVRFRDDKTPQSLVLQLQLALMVDVGRSVTSATIVLEGDEPLVRAHKTYNIVERFRSKLEV 700          
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A6H5K4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R7_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 2.630e-18
Identity = 78/300 (26.00%), Postives = 134/300 (44.67%), Query Frame = 1
Query:   82 KATAEEARKQRIQVMDAWLVAGLPVSRLDD--IRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMKSQYYSISFDGTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAIEKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAGHDVNQDVLENFMQMRQFLAELMTTEGKDNKKAR----QLLRLVEDPI-DGLHLQLQLAVVCDVGRVITKAT 960
            ++ AE+ +  +I+ +  +L AG+P++ L +      L  L VD+  + HL ++IP +L EE                                          Q ++ L +L+ SM ++ IA E+   +  +  L  + C A + DS + NL ++    L      A  + CLSH FNN G+++        +  +  LLS S   +  +K KVG    S    RWG+  D +  +  N+  + +F+A     +   +K A+    +L++  +D     L LQLQLA++ DVGR +T AT
Sbjct:  320 RSEAEKDKLTQIKAVKGYLAAGVPLNALGNPVFGAFLAHLDVDLPSAGHLAEHIPLILEEE----------------------------------------AAQRVLRLSMLKKSMTADDIAGEVNRIVTHEYSLDPNKCQAIIGDSGAANLLAMDA--LAKLSRYAIVIGCLSHTFNNIGKQLSTQELDTFLGKMHTLLSHSAGSKALFKEKVGVRAPSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYENGDTDKSKAAKFMRDELVQFRDDKNPQSLFLQLQLALMVDVGRSVTSAT 577          
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A6H5JCP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCP4_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 5.160e-11
Identity = 57/189 (30.16%), Postives = 97/189 (51.32%), Query Frame = 1
Query:  511 DSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAGHDVNQDVLENFMQMRQFLAELMTTEGKDNKKAR----QLLRLVEDPI-DGLHLQLQLAVVCDVGRVITKATYALESDKPMIEKAWDIVQEVVTLLGVDGEQLANP 1062
            DS + NL ++    L   F  A  + CLSH FNN     ++D  +     +  LLS S   +  +K KVG   +S    RWG+  D +  +  N+  + +F+A   + +   +  A+    +L+R+ +D     L LQLQ A++ DVGR +T AT  LE D+P+ +K ++IV+   + L +  + + +P
Sbjct:   16 DSCAANLLAMDA--LAKLFRYAIVIGCLSHTFNNQLSTPELDTFR---GKMHTLLSHSAGAKALFKEKVGVRAQSTPGHRWGSRFDRDYIIAMNWPGVLEFIAAYESEDTDKSNAAKFMRDELVRVRDDKNPQSLILQLQQALMVDVGRSVTSATIVLEGDEPLAQKTYNIVERFRSKLELAEDGVFSP 199          
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Match: A0A2B4ST24_STYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4ST24_STYPI)

HSP 1 Score: 70.5 bits (171), Expect = 1.540e-9
Identity = 55/206 (26.70%), Postives = 104/206 (50.49%), Query Frame = 1
Query:   91 AEEARKQRIQVMDAWLVAGLPVSRLDDIRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMK----------SQYYSISFDGTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAIEKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNNTGERIDIDIAQRLVSGLKELLS 678
            A++A +Q  +VM+ +L AG+P+S++D +R LL + G  +  SS+L QYI  +  +E   + T+ K          ++  S+ FDG+     E    + R + +   + Q L+ + +   S+N++ +A  + +A+  +  +  +  +A M D AS N  ++  +    FF     + C SH  ++  E     IA  +V  L++LLS
Sbjct:  127 AQQAYRQ--EVMEEFLKAGIPISKIDKLRSLLEKNGHRLTSSSNLAQYITLIFKQE---VDTIKKELSLPGQGDMTRDVSVIFDGSTR-QGEAIAKIVRFIDDQWAITQRLMRIDVCSKSVNADELARVLNEALCVEFGIRANSLLAAMRDGASVNQAALNRI--QFFFPKMLNIVCFSH--SSHLEAATEKIAPNIVRELQDLLS 322          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10216.356.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5K9K3_9PHAE9.180e-8844.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X7TFE2_AMPQE1.250e-3728.45Dimer_Tnp_hAT domain-containing protein n=1 Tax=Am... [more]
A0A6H5JD81_9PHAE1.990e-3730.63Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6R8_9PHAE5.540e-3427.41Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec... [more]
A0A6H5KTX0_9PHAE4.840e-3129.34Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN03_9PHAE2.870e-3027.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJR7_9PHAE2.520e-2026.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4R7_9PHAE2.630e-1826.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCP4_9PHAE5.160e-1130.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2B4ST24_STYPI1.540e-926.70Dimer_Tnp_hAT domain-containing protein n=1 Tax=St... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10216contigEcto-sp8_S_contig10216:1412..3796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop0
Start1
Seed ortholog score128.6
Seed ortholog evalue5.6e-27
Seed eggNOG ortholog400682.PAC_15703819
Model size1082
Hectar predicted targeting categoryother localisation
Exons7
EggNOG OGs2F3H4@1,2T4GH@2759,3AMYP@33154,3C10E@33208
Cds size1068
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10216.356.1prot_Ecto-sp8_S_contig10216.356.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10216 1424..3796 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143119.9127185-UTR-Ecto-sp8_S_contig10216:1411..14231681143119.9127185-UTR-Ecto-sp8_S_contig10216:1411..1423Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10216 1412..1423 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143119.921414-CDS-Ecto-sp8_S_contig10216:1423..15311681143119.921414-CDS-Ecto-sp8_S_contig10216:1423..1531Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10216 1424..1531 +
1681143119.9288545-CDS-Ecto-sp8_S_contig10216:1946..21591681143119.9288545-CDS-Ecto-sp8_S_contig10216:1946..2159Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10216 1947..2159 +
1681143119.9360437-CDS-Ecto-sp8_S_contig10216:2306..24591681143119.9360437-CDS-Ecto-sp8_S_contig10216:2306..2459Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10216 2307..2459 +
1681143119.947667-CDS-Ecto-sp8_S_contig10216:2671..28011681143119.947667-CDS-Ecto-sp8_S_contig10216:2671..2801Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10216 2672..2801 +
1681143119.9569705-CDS-Ecto-sp8_S_contig10216:2982..32361681143119.9569705-CDS-Ecto-sp8_S_contig10216:2982..3236Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10216 2983..3236 +
1681143119.9652417-CDS-Ecto-sp8_S_contig10216:3428..35541681143119.9652417-CDS-Ecto-sp8_S_contig10216:3428..3554Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10216 3429..3554 +
1681143119.9749386-CDS-Ecto-sp8_S_contig10216:3712..37961681143119.9749386-CDS-Ecto-sp8_S_contig10216:3712..3796Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10216 3713..3796 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10216.356.1

>prot_Ecto-sp8_S_contig10216.356.1 ID=prot_Ecto-sp8_S_contig10216.356.1|Name=mRNA_Ecto-sp8_S_contig10216.356.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=356bp
MEKEAKAPGMLLRLEEWGAEKYGKATAEEARKQRIQVMDAWLVAGLPVSR
LDDIRGLLGELGVDMADSSHLRQYIPFLLSEERLRLGTVMKSQYYSISFD
GTPLWHQECFGIMARIVTEDLVVVQNLIHLHLLECSMNSNHIAAEITDAI
EKKNKLPRDHCVAFMYDSASPNLKSIREVLLPMFFTGAHGLQCLSHMFNN
TGERIDIDIAQRLVSGLKELLSQSFRHRQFWKTKVGKSWKSVNSVRWGAG
HDVNQDVLENFMQMRQFLAELMTTEGKDNKKARQLLRLVEDPIDGLHLQL
QLAVVCDVGRVITKATYALESDKPMIEKAWDIVQEVVTLLGVDGEQLANP
VLPNFE
back to top

mRNA from alignment at Ecto-sp8_S_contig10216:1412..3796+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10216.356.1 ID=mRNA_Ecto-sp8_S_contig10216.356.1|Name=mRNA_Ecto-sp8_S_contig10216.356.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2385bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10216:1412..3796+ (Ectocarpus species8 EcLAC_412)
CTGAAGGTGTGGATGGAGAAGGAAGCGAAGGCTCCTGGGATGCTGCTACG CTTGGAGGAGTGGGGAGCAGAGAAGTACGGCAAAGCCACAGCGGAGGAGG CCCGGAAGCAAAGGATTCAGGTGACTGGACTGCTTGCTTTTTCTACAAGT ATAGTTATACAGAGTCCCTGACCTTTGACCTTTGACTGTATTTTAATTCT TCGTTTGCACAGTAGTTTCAACGTACTATGAGCTCTGAGCACACGGGTAG GTGGGTAGGTGGGTTCGCGTTTGGTGTAGCGCAGCAGCGTTGCAGCGGGT TTGCAGCACCTTTGGGTAAAGCAGCTTTGCGTCCCCCAAAACAGTTCCCT CCCCCGCTCCCCCGCCACCTGCGTAAACGCTCCTCGTGTTCTCATTTTCA GCACCCTTGCGATTTGTGTCTGCTCGACGCTCGACTCTGGCTAGTGGAGG TTGGTTGTGCTTTCATTGTTTGATGCTCGAGTTGTGTTGCTGATGTTTAT CGTTCATTACTTGGTGCTCATGCCATCTCGCGCAGGTGATGGACGCGTGG CTGGTGGCAGGACTTCCAGTTTCGAGGTTGGACGACATCAGGGGCCTTTT GGGGGAGCTCGGCGTGGACATGGCGGACAGCTCGCACCTCCGGCAGTACA TCCCTTTCCTCCTTTCGGAGGAGCGTCTCAGGCTTGGCACGGTGATGAAG AGCCAATACTACAGCATCAGCTTCGACGGCACGCCATTGTGGCACCAGGT ACGCGAACCTCTTTTAGTTGTTGTGAAAACGTGTGTGGTACATAATTAGT GGTACACCTGGAGGACGCCGGGTTTTCGCTGACATCGTGCGCATTTTACC GTTTGGTCCTTCACTTGTTTCGCTTTTCTTCGCCACAATCTCCAGGAATG CTTCGGCATCATGGCAAGGATCGTGACGGAGGACCTGGTCGTGGTTCAGA ACCTCATCCACCTGCACCTCCTCGAGTGTTCCATGAACTCCAACCACATC GCGGCCGAGATTACGGACGCCATCGAGAAGAAGAACAAGCTGCCCAGGGT ATGTGTTGTACGTTTGTTTGTCTTCAGGGTCCGCCCGAGTGCCACCACGT GTAAATGTGTCGCTTCGAAGTGTTTCCCGGTTCTCGCGCATCATGTACGA GTATGACGTGTCCATTAAACTTTTCGCGCAGCTCGCCACGCCGAAGTCCC ACAATCTTTTTCGTTTTGCCATTGCGTGTCGTCGTCCTTTCCCTTTATAC GTTTGCGCAGGACCACTGCGTGGCATTCATGTACGATTCAGCGTCCCCAA ATCTCAAGAGTATCAGGGAGGTTCTTCTCCCAATGTTCTTTACGGGCGCC CACGGACTCCAGTGCTTGAGTCACATGTTCAACAACACGGGTACGTATGG TCAGTGGCGACAACTAGCGGGCTCCTGATTATTTTGTTGTTTTACGTTGC GGTTGAAGGCTTTGCAGTTTATGTGCGTCAGTGCAGTTGAAGGCTTTTGC AGTTTCTGTCAGTTGAACGCTTGGCAGGGTGGTGTTCCCCAAATGACAGC AACGCCGTTCGTGGTTTGCAGGTGAAAGGATCGACATCGACATAGCCCAA CGTTTGGTGAGCGGGCTGAAGGAACTTCTCAGCCAAAGCTTTCGCCACCG CCAATTCTGGAAGACCAAGGTCGGAAAGTCGTGGAAGTCCGTCAACTCGG TCCGGTGGGGGGCTGGTCACGATGTGAACCAGGACGTCCTGGAAAACTTC ATGCAGATGCGCCAATTTTTGGCGGAGCTCATGACCACAGAGGGCAAGGA CAACAAAAAGGCACGCCAGCTCCTGGTGAGTTGTCGCCATCCGCTAGTGA ATGCCCAAGGACCCTCTGCACCGCAACGAGAAGCCAGAGACTCAGCAGAT TGGCTTGATCGTACGTATATGTGCTTGTATTTTTTTGCAAGTGTACGTGT GCCGTTCGCAAACGTGCATGTGCCGTGTGCTGACCGTTGCTGCCCCCATG TGTGCTTCAATTTCCAGCGCCTCGTAGAGGACCCCATTGACGGTCTGCAC CTCCAGCTTCAGCTCGCCGTTGTGTGCGACGTCGGAAGGGTTATCACCAA GGCCACGTACGCGCTGGAGAGTGACAAGCCGATGATTGAGAAGGTAACAT TGAATGGATTCAATGGTTCTTTCGCGCCTCCAATTTGCGTGAGGGTAGTG TGGGAAGTCTGGTGGTTATACAAGTTGTGGGCACAGTCGAATGAGCTCAT TTACCAATCCTCCGCCCTTTTTTTCTCCATGCCGCTGCTGTCTGTTTGTA GGCGTGGGACATCGTCCAGGAGGTGGTTACTCTCCTTGGGGTCGACGGCG AGCAACTCGCTAACCCCGTCCTGCCCAACTTCGAA
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10216:1412..3796+

>mRNA_Ecto-sp8_S_contig10216.356.1 ID=mRNA_Ecto-sp8_S_contig10216.356.1|Name=mRNA_Ecto-sp8_S_contig10216.356.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1068bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10216:1412..3796+ (Ectocarpus species8 EcLAC_412)
ATGGAGAAGGAAGCGAAGGCTCCTGGGATGCTGCTACGCTTGGAGGAGTG
GGGAGCAGAGAAGTACGGCAAAGCCACAGCGGAGGAGGCCCGGAAGCAAA
GGATTCAGGTGATGGACGCGTGGCTGGTGGCAGGACTTCCAGTTTCGAGG
TTGGACGACATCAGGGGCCTTTTGGGGGAGCTCGGCGTGGACATGGCGGA
CAGCTCGCACCTCCGGCAGTACATCCCTTTCCTCCTTTCGGAGGAGCGTC
TCAGGCTTGGCACGGTGATGAAGAGCCAATACTACAGCATCAGCTTCGAC
GGCACGCCATTGTGGCACCAGGAATGCTTCGGCATCATGGCAAGGATCGT
GACGGAGGACCTGGTCGTGGTTCAGAACCTCATCCACCTGCACCTCCTCG
AGTGTTCCATGAACTCCAACCACATCGCGGCCGAGATTACGGACGCCATC
GAGAAGAAGAACAAGCTGCCCAGGGACCACTGCGTGGCATTCATGTACGA
TTCAGCGTCCCCAAATCTCAAGAGTATCAGGGAGGTTCTTCTCCCAATGT
TCTTTACGGGCGCCCACGGACTCCAGTGCTTGAGTCACATGTTCAACAAC
ACGGGTGAAAGGATCGACATCGACATAGCCCAACGTTTGGTGAGCGGGCT
GAAGGAACTTCTCAGCCAAAGCTTTCGCCACCGCCAATTCTGGAAGACCA
AGGTCGGAAAGTCGTGGAAGTCCGTCAACTCGGTCCGGTGGGGGGCTGGT
CACGATGTGAACCAGGACGTCCTGGAAAACTTCATGCAGATGCGCCAATT
TTTGGCGGAGCTCATGACCACAGAGGGCAAGGACAACAAAAAGGCACGCC
AGCTCCTGCGCCTCGTAGAGGACCCCATTGACGGTCTGCACCTCCAGCTT
CAGCTCGCCGTTGTGTGCGACGTCGGAAGGGTTATCACCAAGGCCACGTA
CGCGCTGGAGAGTGACAAGCCGATGATTGAGAAGGCGTGGGACATCGTCC
AGGAGGTGGTTACTCTCCTTGGGGTCGACGGCGAGCAACTCGCTAACCCC
GTCCTGCCCAACTTCGAA
back to top