mRNA_Ecto-sp8_S_contig102101.345.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig102101.345.1
Unique NamemRNA_Ecto-sp8_S_contig102101.345.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: D8LJ59_ECTSI (Metacaspase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ59_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 4.630e-46
Identity = 76/83 (91.57%), Postives = 82/83 (98.80%), Query Frame = 1
Query:    1 ANLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV 249
            ANLKI+SDDGEHEEP+K+NILKAIKWLV+GAKAGDSLFMHYSGHGGSVKD TGDEEDNKDETMIPVDYMKSGQIKDDEIL+E+
Sbjct:  206 ANLKIVSDDGEHEEPSKENILKAIKWLVHGAKAGDSLFMHYSGHGGSVKDNTGDEEDNKDETMIPVDYMKSGQIKDDEILKEL 288          
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: A0A7S0YNU0_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YNU0_9CRYP)

HSP 1 Score: 116 bits (291), Expect = 2.320e-29
Identity = 52/83 (62.65%), Postives = 65/83 (78.31%), Query Frame = 1
Query:    1 ANLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV 249
            +N K+L DDG HE P+  NIL+  +WLVNGA++GDSLFMHYSGHGGS+ D  GDE D +DETM PVDY  +GQI+DD I E++
Sbjct:  220 SNAKVLMDDGRHESPSHLNILQGFQWLVNGAQSGDSLFMHYSGHGGSMPDDNGDESDGRDETMCPVDYASAGQIRDDVIYEQL 302          
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: D7G061_ECTSI (Metacaspase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G061_ECTSI)

HSP 1 Score: 117 bits (292), Expect = 1.150e-28
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query:    4 NLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV 249
            +LKI+ DDGEH  PT+ NI++AI+WLV GA  GDSLFMHYSGHGGSV+D   +E+D +DETMIP DY  SG IKDDE+L E+
Sbjct:  192 DLKIVMDDGEHTAPTRANIIEAIEWLVEGAAPGDSLFMHYSGHGGSVEDTDNNEKDKRDETMIPTDYSMSGHIKDDELLSEL 273          
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: D8LTK1_ECTSI (Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK1_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 1.570e-28
Identity = 54/82 (65.85%), Postives = 66/82 (80.49%), Query Frame = 1
Query:    4 NLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV 249
            +LKI+ DDGEH  PT+ NI++AI+W V GA  GDSLFMHYSGHGGSV+D   +E+D +DETMIPVDY  SG IKDDE+L E+
Sbjct:  187 DLKIVMDDGEHTAPTRANIIEAIEWFVEGAAPGDSLFMHYSGHGGSVEDNDNNEKDKRDETMIPVDYRVSGHIKDDELLAEL 268          
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: A0A7S0MFT1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MFT1_9CRYP)

HSP 1 Score: 112 bits (280), Expect = 4.910e-28
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 1
Query:    1 ANLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV 249
            AN+K L DDG++  P K  +L A+KWLV GAK GDSLFMHYSGHGG ++D TGDE D  DET++P+DY   GQI+DD++L+E+
Sbjct:  180 ANMKFLLDDGKNIVPNKVEVLTALKWLVQGAKEGDSLFMHYSGHGGQLRDDTGDEADGFDETLVPLDYQTKGQIRDDDLLKEL 262          
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: L1I610_GUITC (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I610_GUITC)

HSP 1 Score: 113 bits (282), Expect = 5.130e-28
Identity = 51/83 (61.45%), Postives = 65/83 (78.31%), Query Frame = 1
Query:    1 ANLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV 249
            A++++L DDG +  PT+ NIL +IKWLV  AK+GD LFMHYSGHGGS+KD  GDE D  DETM+PVDY  +GQI+DD I +E+
Sbjct:  232 ASMRVLMDDGSNMNPTRANILDSIKWLVKDAKSGDCLFMHYSGHGGSMKDDNGDEADGMDETMVPVDYTSTGQIRDDIIFQEL 314          
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: A0A7S2S7V1_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S7V1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.260e-28
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 1
Query:    1 ANLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV 249
             ++K+L DDG HE PT +NI+ AI WLV GA A DSLF+HYSGHGG V D++GDE+D KDET++PVD+  SGQI DD + +E+
Sbjct:  201 GDMKVLMDDGSHENPTAKNIMSAIDWLVEGAAANDSLFLHYSGHGGYVTDESGDEKDGKDETLVPVDFQSSGQIIDDILFQEL 283          
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: D7G0P1_ECTSI (Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P1_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.690e-27
Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 1
Query:    1 ANLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV 249
            A+ K+L DD  H  P  + +++  +WL   AKAGDSLFMHYSGHGGSVKD +GDE DN DET++PVDY  SGQI DDEIL+E+
Sbjct:  197 ADCKVLMDDNVHGMPDHKGVIEGFRWLTADAKAGDSLFMHYSGHGGSVKDTSGDEADNMDETLVPVDYKSSGQITDDEILKEL 279          
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: A0A7S0EWY7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EWY7_9CRYP)

HSP 1 Score: 110 bits (275), Expect = 4.880e-27
Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = 1
Query:    1 ANLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV 249
            A++++L DDG +  P + NIL +IKWLV  AK+GD LFMHYSGHGGS+KD  GDE D  DETM+PVDY  +GQI+DD I +E+
Sbjct:  232 ASMRVLMDDGSNMVPNRANILDSIKWLVKDAKSGDCLFMHYSGHGGSMKDDNGDEADGMDETMVPVDYASAGQIRDDLIFQEL 314          
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Match: A0A7S4GLK6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GLK6_9EUGL)

HSP 1 Score: 108 bits (271), Expect = 1.210e-26
Identity = 50/80 (62.50%), Postives = 66/80 (82.50%), Query Frame = 1
Query:    4 NLKILSDDGEHE-EPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKDKTGDEEDNKDETMIPVDYMKSGQIKDDEIL 240
            + ++L+DDG+ +  PTKQNIL   KWLV+GAKAGDSLF HYSGHGGS+K +  DE+D KDET++P+DY K+GQI+D+ IL
Sbjct:  187 DFRVLTDDGQGDASPTKQNILDGFKWLVDGAKAGDSLFFHYSGHGGSLKAEAEDEKDGKDETLVPLDYKKAGQIRDNAIL 266          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig102101.345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ59_ECTSI4.630e-4691.57Metacaspase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A7S0YNU0_9CRYP2.320e-2962.65Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
D7G061_ECTSI1.150e-2865.85Metacaspase n=3 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D8LTK1_ECTSI1.570e-2865.85Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S0MFT1_9CRYP4.910e-2860.24Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
L1I610_GUITC5.130e-2861.45Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
A0A7S2S7V1_9STRA5.260e-2860.24Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
D7G0P1_ECTSI1.690e-2761.45Metacapase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A7S0EWY7_9CRYP4.880e-2760.24Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S4GLK6_9EUGL1.210e-2662.50Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig102101contigEcto-sp8_S_contig102101:5..536 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score159.5
Seed ortholog evalue7e-37
Seed eggNOG ortholog2880.D8LJ59
Preferred nameMCA5
Model size249
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.cysteine-type peptidase activity
EggNOG OGsKOG1546@1,KOG1546@2759
Cds size249
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143119.4206927-CDS-Ecto-sp8_S_contig102101:4..1791681143119.4206927-CDS-Ecto-sp8_S_contig102101:4..179Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig102101 5..179 -
1681143119.4313323-CDS-Ecto-sp8_S_contig102101:462..5361681143119.4313323-CDS-Ecto-sp8_S_contig102101:462..536Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig102101 463..536 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig102101.345.1prot_Ecto-sp8_S_contig102101.345.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig102101 5..536 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig102101.345.1

>prot_Ecto-sp8_S_contig102101.345.1 ID=prot_Ecto-sp8_S_contig102101.345.1|Name=mRNA_Ecto-sp8_S_contig102101.345.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=83bp
ANLKILSDDGEHEEPTKQNILKAIKWLVNGAKAGDSLFMHYSGHGGSVKD
KTGDEEDNKDETMIPVDYMKSGQIKDDEILEEV
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mRNA from alignment at Ecto-sp8_S_contig102101:5..536-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig102101.345.1 ID=mRNA_Ecto-sp8_S_contig102101.345.1|Name=mRNA_Ecto-sp8_S_contig102101.345.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=532bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102101:5..536- (Ectocarpus species8 EcLAC_412)
GCAAACCTCAAGATCTTGTCCGATGACGGAGAGCACGAGGAGCCCACAAA GCAGAACATCCTCAAGGCCATCAAGTAAGTTGTCATTCCTTTCTTTTTGT TGACATTGCTGCTGCTGCTGCTGCTGTGTTGATATTGGTTTCGAGTTTTC ATTTTTTATCATCGGGTGCCGTTGTTGTTGGTTTTACTGCGTGTTTACCG CTCCAGTAATAATAGCGTTTTCGTGATTTGTTTTTGTTCGGCTCTTGGTG ATGCTACTGGACTGGACTGCCGTGTCAGTGCTATACCCCCTTCGCGTACA CCTCTCAATCAATCAAAATCTGCTTTTTTGGCTCTGTCGATGCCGGACGA AAAAAAGGTGGCTCGTTAACGGCGCCAAGGCCGGAGACTCGCTCTTCATG CACTACTCGGGCCACGGGGGCTCCGTGAAGGACAAGACCGGCGACGAGGA GGACAACAAGGACGAGACCATGATCCCCGTCGACTACATGAAGTCGGGAC AGATCAAGGACGACGAGATCCTCGAGGAGGTA
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig102101:5..536-

>mRNA_Ecto-sp8_S_contig102101.345.1 ID=mRNA_Ecto-sp8_S_contig102101.345.1|Name=mRNA_Ecto-sp8_S_contig102101.345.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=249bp|location=Sequence derived from alignment at Ecto-sp8_S_contig102101:5..536- (Ectocarpus species8 EcLAC_412)
GCAAACCTCAAGATCTTGTCCGATGACGGAGAGCACGAGGAGCCCACAAA
GCAGAACATCCTCAAGGCCATCAAGTGGCTCGTTAACGGCGCCAAGGCCG
GAGACTCGCTCTTCATGCACTACTCGGGCCACGGGGGCTCCGTGAAGGAC
AAGACCGGCGACGAGGAGGACAACAAGGACGAGACCATGATCCCCGTCGA
CTACATGAAGTCGGGACAGATCAAGGACGACGAGATCCTCGAGGAGGTA
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