mRNA_Ecto-sp8_S_contig101985.324.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: D7FPR4_ECTSI (Hypothetical leucine rich repeat calcium binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPR4_ECTSI) HSP 1 Score: 165 bits (418), Expect = 1.290e-45 Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 1
Query: 13 KLAAVGNQERQCSKSSGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ 249
K+AAVGNQERQCSKSSGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ
Sbjct: 502 KMAAVGNQERQCSKSSGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ 580
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: T0QSD8_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QSD8_SAPDV) HSP 1 Score: 90.5 bits (223), Expect = 3.330e-19 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 1
Query: 7 LLKLAAVGNQERQCSKS-SGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ 249
++KLA + E+Q SK+ S DTSQHGNW+NFRN ++ +PVVLTSA+F +PS G L FDYVSTSRP P++ RRFQ
Sbjct: 1040 VMKLAEIAQAEKQFSKTRSCRGDTSQHGNWENFRNELFDGKPVVLTSAFFQNVPSKGKLEFDYVSTSRPKRGTKPMSTRRFQ 1121
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: A0A5D6XPE9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPE9_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.340e-19 Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 7 LLKLAAVGNQERQCSK-SSGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ 249
L K+A V E+ S+ SG ADTSQHGNW+NFRN E + +PVVLTSA+F+ LP G L FDYVST+RP P++ RRF+
Sbjct: 1094 LNKIAEVAQSEKLFSRLKSGRADTSQHGNWENFRNEELDGQPVVLTSAFFLVLPRRGKLAFDYVSTARPKRGTAPMSARRFE 1175
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: A0A397AQQ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AQQ8_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.010e-18 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 7 LLKLAAVGNQERQCSKS-SGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ 249
L+KLA V E+Q SKS SG DTSQHGNW+NFRN + + +LTS +F +P G L FDYVSTSRP P+++RR+Q
Sbjct: 86 LIKLAEVAQAEKQFSKSRSGRGDTSQHGNWENFRNEWLDGKATILTSHFFQTMPQKGKLEFDYVSTSRPTRGTKPMSDRRYQ 167
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: A0A8K1CIN9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIN9_PYTOL) HSP 1 Score: 88.6 bits (218), Expect = 1.580e-18 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 1
Query: 13 KLAAVGNQERQCSKS-SGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ 249
K+A V +E+ SK+ SG DTSQHGNW+NFRN + E VLT+A+F LP+SG L FDYVST+RP +PL+ERRFQ
Sbjct: 1067 KIAEVAQREKLFSKNKSGRGDTSQHGNWENFRNELLDGECFVLTTAFFHMLPTSGKLSFDYVSTTRPKRGTVPLSERRFQ 1146
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: A0A6G0W9B4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9B4_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.150e-18 Identity = 43/82 (52.44%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 7 LLKLAAVGNQERQCSKS-SGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ 249
L+KLA + E+Q SK+ SG DTSQHGNW+NFRN + +P +LTS++F +P G L FDYVST+RP P+++RRFQ
Sbjct: 893 LVKLAEIAQAEKQFSKARSGRGDTSQHGNWENFRNEMVDGKPAILTSSFFQTMPLKGKLEFDYVSTTRPPRGTKPMSDRRFQ 974
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: A0A1W0A877_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A877_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 4.020e-18 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 7 LLKLAAVGNQERQCSKS-SGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ 249
L KLA + E+Q SK+ S DTSQHGNW+NFRN + +P++LTS +F +P+ G L FDYVSTSRP P++ RRFQ
Sbjct: 1036 LFKLAEIAQAEKQFSKTRSCRGDTSQHGNWENFRNELFEGKPIILTSTFFQNIPNKGKLEFDYVSTSRPKRGTKPMSTRRFQ 1117
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: A0A662XVY1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XVY1_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 5.500e-18 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 1
Query: 7 LLKLAAVGNQERQCSK-SSGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRF 246
L KLA V E+ SK SG ADTSQHGNW+NFRN E + +VLT+A+F LP G L FDYVST+RP +P++ERRF
Sbjct: 1049 LTKLAEVAQSEKLFSKLRSGRADTSQHGNWENFRNEELDGHRIVLTNAFFHVLPRRGKLCFDYVSTTRPKKGTVPISERRF 1129
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: K3WEV2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEV2_GLOUD) HSP 1 Score: 86.7 bits (213), Expect = 7.460e-18 Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 1
Query: 7 LLKLAAVGNQERQCSK-SSGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRF-QVPHVI 264
L K+A V E+ SK SG ADTSQHGNW+NFRN E + + +VLT+A+F+ LP G L FDYVST+RP P++ RRF Q+ H +
Sbjct: 764 LNKIAEVAQSEKLFSKYKSGRADTSQHGNWENFRNEELDGQKIVLTNAFFLVLPRRGKLSFDYVSTTRPKRGTTPMSARRFDQLIHEL 851
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Match: A0A024TU08_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TU08_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 7.510e-18 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 7 LLKLAAVGNQERQCSKS-SGHADTSQHGNWQNFRNAEYNREPVVLTSAWFIKLPSSGMLRFDYVSTSRPDHHQIPLTERRFQ 249
L KLA + E+Q SKS SG DTSQHGNW+NFRN + +P +LTS +F +P G L FDYVST+RP P+++RR+Q
Sbjct: 1114 LAKLAEIAQAEKQFSKSRSGRGDTSQHGNWENFRNEWLDGKPTILTSHFFQTMPQKGKLEFDYVSTTRPTRGTKPMSDRRYQ 1195 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig101985.324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig101985.324.1 >prot_Ecto-sp8_S_contig101985.324.1 ID=prot_Ecto-sp8_S_contig101985.324.1|Name=mRNA_Ecto-sp8_S_contig101985.324.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=91bp MKLLKLAAVGNQERQCSKSSGHADTSQHGNWQNFRNAEYNREPVVLTSAWback to top mRNA from alignment at Ecto-sp8_S_contig101985:249..521+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig101985.324.1 ID=mRNA_Ecto-sp8_S_contig101985.324.1|Name=mRNA_Ecto-sp8_S_contig101985.324.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=273bp|location=Sequence derived from alignment at Ecto-sp8_S_contig101985:249..521+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig101985:249..521+ >mRNA_Ecto-sp8_S_contig101985.324.1 ID=mRNA_Ecto-sp8_S_contig101985.324.1|Name=mRNA_Ecto-sp8_S_contig101985.324.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=273bp|location=Sequence derived from alignment at Ecto-sp8_S_contig101985:249..521+ (Ectocarpus species8 EcLAC_412)back to top |