mRNA_Ecto-sp8_S_contig10194.317.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: D8LBA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA1_ECTSI) HSP 1 Score: 344 bits (882), Expect = 4.680e-110 Identity = 224/265 (84.53%), Postives = 227/265 (85.66%), Query Frame = 1
Query: 1 QVATRMKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLKEQDIHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQRVAR 795
+VA R+KVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLKEQDIHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANER+RAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREA XXXXXXXXXX L XX RRTKAALYLGRAAAAVEEKNFQQML GAEREAERRQRVAR
Sbjct: 399 EVAARVKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLKEQDIHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERQRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAARERKXXXXXXXXXXRIQRERNSIALMEELERKRLAREAEMAVLAEXXXRRTKAALYLGRAAAAVEEKNFQQMLGGAEREAERRQRVAR 663
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: A0A835ZFS9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFS9_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.290e-30 Identity = 115/264 (43.56%), Postives = 156/264 (59.09%), Query Frame = 1
Query: 1 QVATRMKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLKEQDIHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQRVA 792
++A +K EK +M +QR AEEEL + +N+++VK+VTEVR TAPK+AV R L +++ KE L +LEE R R+ EA E + +E VL+L++ ++H VKVF+PTES+GL LLNEMSL ET+ RL N+ + + E+ RRR+IL +A ++ADL++ + SI R AA XXXXXXXXXXXXX L R KAALYLG AAA + Q +L GAER RQ +A
Sbjct: 414 ELAQCIKAEKAVMAQQRRAEEELKLMINKQVVKQVTEVRGTAPKEAVARTLQQRRQAKEHLTAQLEEGRRRRQWEASAEFKEVQERVLRLRQDEVHSVRVKVFNPTESSGLMLLNEMSLAETRERLAMNKMRERQEEAERRRQILADKAAKQADLQKAIASISEAREAAXXXXXXXXXXXXXXXXXXXXRQKLPLQAKSAELLETLEAKRDRRQAELQSLEQQEAERQKAALYLGAAAAGSSARAMQDLLKGAERAERNRQALA 677
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: A0A7S2SJP9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJP9_9STRA) HSP 1 Score: 122 bits (307), Expect = 3.090e-27 Identity = 134/315 (42.54%), Postives = 206/315 (65.40%), Query Frame = 1
Query: 4 VATRMKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLKE-QDIHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQRVAR*AAEKYQKVTREDRRQVEENTRKREARKQRLYKKKQAEFDAARRRLMEEQ 945
+A+ +K E + M++Q+ E+ + MN++LV+EV EVR AP++A +V++EK+ E L +E E+L A + RE + +KK+ VL+L+ ++H HVKVFDPT+SAG+GLL+EMSLVE + RL N+ + E E+ +R EIL + + +L++R++++ R+AA AN++A XXXXXXXXXXXX L XXXXXXXXXXXXXXXXXXXX R + + G+ A EE +F+++L GAERE +RQ A+ A++ Y++ RR V+ KRE +K+++ +K E + R+ L+E++
Sbjct: 397 LASHVKAESNEMKKQKHMEDAMLHMMNRQLVREVGEVRRHAPREAEAKVVEEKRARSEALREEKEKLLAVKLREDARVQEEKKDRVLQLRALAEVHPEHVKVFDPTQSAGIGLLDEMSLVEMRERLAINKARATETEAKKRAEILDVKGVKRHELQKRMDNVHRIRSAAAAANQQARAKVRAEEAVEXXXXXXXXXXXXVTLVEXXXXXXXXXXXXXXXXXXXXXXRKASLAFSGQGTYAAEEMHFEELLKGAEREVYKRQNEAQRASKVYEETKATHRRMVQRTAAKREIQKRKVNAEKAEEIEQRRQALVEKE 711
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: A0A6G0XDN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDN5_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.240e-14 Identity = 77/262 (29.39%), Postives = 129/262 (49.24%), Query Frame = 1
Query: 1 QVATRMKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLKEQD-IHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQ 783
QVA +MK+ E+R EE+ N+ + E+ +VR AP++A +R+ E + ++ + LE+ RA + + E+ ++++ + +++ D +H HV +FDPTES+ GLL EMSLVE + RLE ++AE E+ +R +IL ++ ++EADLK R+ +I R A +NR + L + ++LG A +EE++F Q GAER+A RQ
Sbjct: 384 QVAIQMKLVSKENDEKRRLEEQQIDMANRMVATEIKQVRQVAPREAEERIKLENQKKRDAVHALLEQERARKAEQDAIEQAQREDLIRQIRALDRVHREHVAIFDPTESSNCGLLEEMSLVELRERLELRRIEQAEEEAQKREQILGEKKEKEADLKARVSNISRIRQLAAVSNRTSRERRKQLEREKAEREKQLRDEGNLKLAQKMAAQRKERDAEFQRLKEEEQLIANKRMFLGAAKNMLEERHFMQQTMGAERQASDRQ 645
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: A0A024UCP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCP7_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.320e-13 Identity = 104/308 (33.77%), Postives = 158/308 (51.30%), Query Frame = 1
Query: 4 VATRMKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLKEQD-IHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQRVAR*AAEKYQKVTREDRRQVEENTRKREARKQRLYKKKQA-EFDAA 921
VA +MK+ +E+R EE ++++ E+ R +AP++A RV EK+ +E + LE+ RA + + E+ ++++ + +++ D +H HV VFDPTESA LGLL+EMSLVE + RL+ + + AE E+ RR IL ++ ++E DLK R+ +I R A ANR + XXXXXXXXX L E ++LG A +E ++F Q GAER+A RQ E QK R VE T++ E + ++ Y+ K+A E DAA
Sbjct: 388 VANQMKLVSKENEEKRRLEEMEIDQAHRQVALEIKLTRESAPREAEDRVKAEKQKQREAVNALLEQERARKAAQDAIEQAQREDLIRQIRALDRVHREHVTVFDPTESANLGLLDEMSLVELRERLQLRKVEEAELEAQRRELILQEKKEKELDLKARVSNISRIRQLAASANRSSRERXXXXXXXXXDQEKKMRDEGNVKLAQKMAAQRAERDAEFQRLKEEGELIANKRMFLGAAKNMLEMRHFMQQTMGAERQASNRQ-------EAVQKEAR-----VEAQTKETEKKMRQTYRHKKAIEHDAA 683
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: F0YGQ3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGQ3_AURAN) HSP 1 Score: 80.9 bits (198), Expect = 5.550e-13 Identity = 83/263 (31.56%), Postives = 123/263 (46.77%), Query Frame = 1
Query: 1 QVATRMKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLK-EQDIHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQR 786
Q+A R E MQ+QR+ E E+ +F + LV EV E R TAPK AV+ VL+ K ++ + ++E R+ E E V +LK EQ +H H FDPT++ GLGLL+EMSLVE + RL N ++ E +R+E+++ R + L ER+++I+ R AA + N + L ER K L+ G E+K +++L GAER A+ QR
Sbjct: 2047 QLAARGVEEGRAMQKQRQLETEMTLFKKKHLVGEVKEERETAPKLAVESVLERKNQIRKGVQHDMETRLKHRQDENDARAKALAEHVKRLKAEQSVHRDHTNFFDPTDTVGLGLLDEMSLVEMQERLTRNRKRDQENCEQKRKELVVARNAKRDRLAERVKNIKKVREAAAEKNHKTSQYQSQCAADLKTAIQHREERLLLDLVEELEIKRTVLSSYREKLRDEAERTKKDQLFAGAGEQLKEKKAHEELLKGAERMAKNTQR 2309
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: A0A1V9ZJ38_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJ38_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.750e-13 Identity = 77/249 (30.92%), Postives = 121/249 (48.59%), Query Frame = 1
Query: 43 EQREAEEELAVFMN-QRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLKEQD-IHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQ 783
EQ+ EEE ++ + Q+ E+ +VR AP++A +RV E +E+L LE R + + E+ ++++ + +++ D +H HV VFDPTES+ GLL EMSLVE + RL+ + + AE E+ RR +IL + +E DLK R+++I R +A ANR A L E ++LG A +EE++F + GAER+A RQ
Sbjct: 400 EQKRREEEASINQHYQQAAVEIKQVREVAPREAEERVRVENARKREELNAMLEAERVRKAEQDALEQAQREDLIRQIRALDRVHREHVAVFDPTESSNYGLLEEMSLVELRERLQMKKVQEAEWEAERREQILESKKDKEEDLKSRVQNIARIRQSAAVANRAARTRRKQLEQEKLEREKKLRDEGNVKLAAKMAKQREEREAEARRLREEEELIANKRMFLGAAKNMLEERHFMEQSLGAERQAANRQ 648
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: W4FJS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJS5_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 7.830e-13 Identity = 79/261 (30.27%), Postives = 123/261 (47.13%), Query Frame = 1
Query: 4 VATRMKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEELKKKEAVLKLKEQD-IHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQ 783
VA +MK+ E+R EE N++ E+ R AP++A +RV + +E + LE RA + + ++ ++++ + +++ D +H HV +FDPTESA LGLL+EMSLVE + RL+ + + AE E+ RR IL ++ +READLK R+ +I R A ANR + L E ++LG A +E ++F Q GAER+A RQ
Sbjct: 388 VANQMKLVSKENDERRRLEEMAIDDSNRQGALEIKLTREVAPREAEERVKSDNHRKREAVNAMLETERARKAAQDAIDQAQREDLIRQIRALDRVHREHVAIFDPTESANLGLLDEMSLVELRERLQLRKVEEAELEAQRRELILQEKKEREADLKSRVSNISRIRQLAASANRTSRDRRKQLEQDKRDQDKHMRDQGNLKLAQKMAAQRADRDAEFQRLKEEGELVANKRMFLGAAKNMLEVRHFMQQTMGAERQASNRQ 648
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: A0A8K1FP63_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FP63_PYTOL) HSP 1 Score: 79.3 bits (194), Expect = 1.400e-12 Identity = 89/267 (33.33%), Postives = 143/267 (53.56%), Query Frame = 1
Query: 1 QVATRMK-VEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKE---EELKKKEAVLKLKEQD-IHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQR 786
+VA +MK V KDL ++ E++L Q++ ++ ++R AP++A +R+ +EK +E+L E L A R+R+A E E+ ++++ + +++ D +H HV VFDPTE+ LGLL EMSL E K RL + ++ E ARR IL + +++A L+E+++++ R AA AN XXXXXXXX L E K ++LG A + +EE +F Q+ GAER+ ++RQR
Sbjct: 390 EVAIQMKAVSKDLEAQRMMEEQQLEERYRQQM-SDIKKIRDVAPREAEERLKEEKHKAREELN---EFLAAERERKAAEDALEQAQREDLIRQIRALDRVHREHVVVFDPTETVQLGLLEEMSLAELKERLVVRKAEQQAWEDARRENILTDKQEKDAALEEKVKTLSKLRNAAATANATQRSRKKAMEEAKXXXXXXXXRQGNLQLAEKLTAQRAAREAQVEKLKQEAEEIAKKRMFLGAAKSMLEESHFDQLKRGAERQVQQRQR 652
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Match: A0A067C6L4_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C6L4_SAPPC) HSP 1 Score: 77.0 bits (188), Expect = 7.110e-12 Identity = 82/267 (30.71%), Postives = 129/267 (48.31%), Query Frame = 1
Query: 1 QVATRMKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKCGKEKLCKELEELRAARKREAKEEEL---KKKEAVLKLKEQD-IHEHHVKVFDPTESAGLGLLNEMSLVETKVRLEANERKRAEAESARRREILLQRAKREADLKERLESIQARRAAAKQANREAXXXXXXXXXXXXXXXXXXXXXXXXXLXXXXXXXXXXXXXXXXXXXXXXERRTKAALYLGRAAAAVEEKNFQQMLSGAEREAERRQRV 789
+VA +MK+ E+R EE Q++ ++ + R AP++A +RV E +E+L LE A R+R+A+++ + ++++ + +++ D +H HV VFDPTES+ GLL EMSLVE + RL+ + + AE E+ RR IL + +E DLK R+++I R +A ANR A L E ++LG A +EE++F Q GAEREA +QR
Sbjct: 217 EVAIQMKLVARENDEKRRQEELELNQQYQQIATDIKQTREVAPREAEERVRLENARKREELNAMLE---AERQRKAEQDAIDQAQREDLIRQIRALDRVHREHVAVFDPTESSNYGLLEEMSLVELRERLQMKKVQEAEWEAERREHILESKKDKEEDLKSRVQNIARIRQSAATANRAARARKKQLELEKLEKEKKMRDEGNLKLAAKMTKQRAEREADARRLRDEEELIANKRMFLGAAKNMLEERHFMQQSLGAEREATIKQRA 480 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10194.317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10194.317.1 >prot_Ecto-sp8_S_contig10194.317.1 ID=prot_Ecto-sp8_S_contig10194.317.1|Name=mRNA_Ecto-sp8_S_contig10194.317.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=261bp MKVEKDLMQEQREAEEELAVFMNQRLVKEVTEVRSTAPKDAVQRVLDEKKback to top mRNA from alignment at Ecto-sp8_S_contig10194:863..6930+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10194.317.1 ID=mRNA_Ecto-sp8_S_contig10194.317.1|Name=mRNA_Ecto-sp8_S_contig10194.317.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6068bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10194:863..6930+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10194:863..6930+ >mRNA_Ecto-sp8_S_contig10194.317.1 ID=mRNA_Ecto-sp8_S_contig10194.317.1|Name=mRNA_Ecto-sp8_S_contig10194.317.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=783bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10194:863..6930+ (Ectocarpus species8 EcLAC_412)back to top |