mRNA_Ecto-sp8_S_contig10187.307.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: D8LSW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW6_ECTSI) HSP 1 Score: 751 bits (1938), Expect = 7.680e-257 Identity = 430/472 (91.10%), Postives = 433/472 (91.74%), Query Frame = 2
Query: 251 QKVRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTARQVFTTLALLNITQFTMGKFLYLAVQTASESWVSIKRMETILLMEENETLTAPLQEFDLTIKPDKGMPPNPPASXXXXXXXXXXXXXXXXXXXLMASRGGAPTVDEAEMSGAGAGSAPGAAAADAVVGGEAGRESSMPGCVRGVDEQESGXXXXXXXXXXXXDARPGLVSLKGASFRWASGGEEDQHAKIFRGLMEGDEKKRKAAKDKGISDGAEAAQVEEDNEAEANAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 1666
++VRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTARQVFTTLALLNITQFTMGKFLYLAVQT SESWVSIKRMETILLMEENETLTAPL+EFDL IKPDKGMPPNPPAS XXXXXLMASRGGAPTV EAEMS V GEAG ESSMPGCVRGV EQESGXXXXXXXXXXXXDARPGLVSLKGASFRWASGGEEDQHAKIFRGLMEGDEKKRKAAKD GI DGAEAAQVEEDNEAE NAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ
Sbjct: 298 RRVRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTARQVFTTLALLNITQFTMGKFLYLAVQTTSESWVSIKRMETILLMEENETLTAPLREFDLAIKPDKGMPPNPPASAAAAASTPTGSGSTXXXXXLMASRGGAPTVAEAEMSXXXXXXXXXXXXXXXVARGEAGGESSMPGCVRGVHEQESGXXXXXXXXXXXXDARPGLVSLKGASFRWASGGEEDQHAKIFRGLMEGDEKKRKAAKDNGIGDGAEAAQVEEDNEAEDNAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 769
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: A0A6H5JDN6_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDN6_9PHAE) HSP 1 Score: 670 bits (1728), Expect = 6.530e-224 Identity = 391/490 (79.80%), Postives = 395/490 (80.61%), Query Frame = 2
Query: 206 PPWRRRFAGNGIENAQKVRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTARQVFTTLALLNITQFTMGKFLYLAVQTASESWVSIKRMETILLMEENETLTAPLQEFDLTIKPDKGMPPNPPASXXXXXXXXXXXXXXXXXXX---LMASRGGAPTVDEAEMSGAGAGSAPGAAAADAVVGGEAGRESSMPGCVRGVDEQESGXXXXXXXXXXXXDARPGLVSLKGASFRWASGGEEDQHAKIFRGLMEGDEKKRKAAKDKGISDGAEAAQVEEDNEAEANAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 1666
PP RRF KVRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLT RQVFTTLALLNITQFTMGKFLYLAVQT SESWVSIKRMETILLMEENETL APL+EFDL IKPDK +PPNPPA+XXXXXX MASR RGV E ESG DARPGLVSLKGASFRW SGGEEDQHAKIFRGLMEGDEKKRKAAKD+GISDGAE AQVEEDNEAEANAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGA HG GER SELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ
Sbjct: 96 PPNARRFPVLRATGGGKVRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTPRQVFTTLALLNITQFTMGKFLYLAVQTTSESWVSIKRMETILLMEENETLIAPLREFDLAIKPDKRVPPNPPAAXXXXXXEASTPTGSGSTPSPPSAMASRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGV-ELESGSGGDESGGTGTGDARPGLVSLKGASFRWVSGGEEDQHAKIFRGLMEGDEKKRKAAKDEGISDGAETAQVEEDNEAEANAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGAGHGRGERNSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 584
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: D8LSW4_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW4_ECTSI) HSP 1 Score: 540 bits (1392), Expect = 1.960e-174 Identity = 320/472 (67.80%), Postives = 340/472 (72.03%), Query Frame = 2
Query: 251 QKVRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTARQVFTTLALLNITQFTMGKFLYLAVQTASESWVSIKRMETILLMEENETLTAPLQEFDLTIKPDKGMPPNPPASXXXXXXXXXXXXXXXXXXXLMASRGGAPTVDEAEMSGAGAGSAPGAAAADAVVGGEAGRESSMPGCVRGVDEQESGXXXXXXXXXXXXDARPGLVSLKGASFRWASGGEEDQHAKIFRGLMEGDEKKRKAAKDKGISDGAEAAQVEEDNEAEANAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 1666
++VRAEEIRVLLKATLLRAINEAMFFVQPAV+SCLVFATYHLLGNVL RQVFTTLALLNITQFT+GKFLYLAVQT+ ESWVSIKR+ETILLMEE + + AGA SAP A VV GEA SM GCVRG E G D PGLVSLKGASFRW SG EED+HAK+FRGL+EG +KKRKAA+DK IS GA+AA VEEDNEAE NAGGLTLDAIDLRIEPGQLVGV+GPVGSSKSSLLMA+LREI PE +G G +A GGA HGHGE EPWIQSGT+RENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGD+GVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ
Sbjct: 245 RRVRAEEIRVLLKATLLRAINEAMFFVQPAVISCLVFATYHLLGNVLAPRQVFTTLALLNITQFTLGKFLYLAVQTSIESWVSIKRIETILLMEE-------------------------------------------------------------KTAEAGAASAPSXXXA-VVVAGEAREGPSMAGCVRGAHEPVGGGVSDGGNGA---DEWPGLVSLKGASFRWTSGREEDKHAKVFRGLIEG-KKKRKAAQDKRISHGADAAPVEEDNEAETNAGGLTLDAIDLRIEPGQLVGVIGPVGSSKSSLLMAMLREITPERTSGGAGTAAVHGGAGHGHGE------------------EPWIQSGTIRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDKGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 632
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: A0A6H5JDL0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL0_9PHAE) HSP 1 Score: 532 bits (1370), Expect = 4.680e-172 Identity = 332/468 (70.94%), Postives = 355/468 (75.85%), Query Frame = 2
Query: 263 AEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTARQVFTTLALLNITQFTMGKFLYLAVQTASESWVSIKRMETILLMEENETLTAPLQEFDLTIKPDKGMPPNPPASXXXXXXXXXXXXXXXXXXXLMASRGGAPTVDEAEMSGAGAGSAPGAAAADAVVGGEAGRESSMPGCVRGVDEQESGXXXXXXXXXXXXDARPGLVSLKGASFRWASGGEEDQHAKIFRGLMEGDEKKRKAAKDKGISDGAEAAQVEEDNEAEANAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 1666
AEEIRVLLKATLLRAINEAMFFVQPAV+SCLVFATYHLLGNVL RQVFTTLALLNITQFT+GKFLYLAVQT+ ESWVSIKR+ETILLMEENE LTAPL+EFDL IKPDKG PP PA XXXXXXXXXXXXXXXXXXX + VV GEA SM G VRG EQ G D PGLVSL ASFRW SG EEDQHAK+FRGL+E +K KDKG S GA++A VE +NEAE A GLTLDAIDLRIEPGQLVGV+GPVGSSKSSLLMA+LREI PE +G G +A +GGA HGHGE EPWIQS T+RENILFG AM++KRYDAVIRDCALERDLS LPSGDQTGIGD+GVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGR+LFS+VV GRLKGSTRVLVTHQ
Sbjct: 112 AEEIRVLLKATLLRAINEAMFFVQPAVISCLVFATYHLLGNVLAPRQVFTTLALLNITQFTLGKFLYLAVQTSIESWVSIKRIETILLMEENEDLTAPLREFDLAIKPDKGAPPKSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKTXXXXXXXXXXXXXXXVVAGEAREGPSMAGFVRGAREQVGGGVGDGGNGT---DEWPGLVSLNEASFRWTSGREEDQHAKVFRGLIE----IKKKRKDKGTSSGADSATVE-NNEAETKAEGLTLDAIDLRIEPGQLVGVIGPVGSSKSSLLMAILREITPERTSGGAGTAAIDGGAGHGHGE------------------EPWIQSSTIRENILFGSAMNRKRYDAVIRDCALERDLSFLPSGDQTGIGDKGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRKLFSQVVSGRLKGSTRVLVTHQ 553
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: D8LSW3_ECTSI (Multidrug resistance-associated protein-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSW3_ECTSI) HSP 1 Score: 532 bits (1371), Expect = 1.220e-171 Identity = 313/474 (66.03%), Postives = 333/474 (70.25%), Query Frame = 2
Query: 251 QKVRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTARQVFTTLALLNITQFTMGKFLYLAVQTASESWVSIKRMETILLMEEN--ETLTAPLQEFDLTIKPDKGMPPNPPASXXXXXXXXXXXXXXXXXXXLMASRGGAPTVDEAEMSGAGAGSAPGAAAADAVVGGEAGRESSMPGCVRGVDEQESGXXXXXXXXXXXXDARPGLVSLKGASFRWASGGEEDQHAKIFRGLMEGDEKKRKAAKDKGISDGAEAAQVEEDNEAEANAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 1666
++VRAEEIRVLL ATLLRA+NEAMFF+QPAV+SCLVFATYHLLGNVL RQVFTTLALL+ITQFT+GKFLYLAVQT+SESWVSIKR+ETILLME E TA P SM G VRGV E G + PGLVSLKGASFRW SG EEDQHAK+FRGL+EG +K KD GISDGA+AA E DN AE NAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMA+LREI PE +G G +A +GGA HGHGER + VSV GSLAY SQEPWIQS T+RENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLK STRVLVTHQ
Sbjct: 198 RRVRAEEIRVLLTATLLRAVNEAMFFIQPAVISCLVFATYHLLGNVLAPRQVFTTLALLSITQFTVGKFLYLAVQTSSESWVSIKRIETILLMEAKTAEAGTAXXXXXXXXXXXXXXXREGP----------------------------------------------------------------SMAGSVRGVREPVGGRDSDGGNGA---EEWPGLVSLKGASFRWTSGREEDQHAKVFRGLIEG----KKKRKDLGISDGADAAPGEGDNGAETNAGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAMLREITPERTSGGAGTAAVDGGAGHGHGERNCQPLVSVSGSLAYTSQEPWIQSSTIRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKESTRVLVTHQ 600
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: A0A2J7QE02_9NEOP (Uncharacterized protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QE02_9NEOP) HSP 1 Score: 196 bits (497), Expect = 3.710e-51 Identity = 102/191 (53.40%), Postives = 128/191 (67.02%), Query Frame = 2
Query: 1094 TLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 1666
TL + L + PG+LV VVGPVGS K+SLL A+L+E+ S + +SV GS++YASQEPW+ +G++R+NILFG+ MD+ RY V+R CALERD LLP GD+T +G+RGV LSGGQ+AR+ LAR Y AD YL+DDPLSAVD VGR LF +CG L G TRVLVTHQ
Sbjct: 207 TLTDVSLDVRPGELVAVVGPVGSGKTSLLHAILKELPLNSGS------------------------ISVGGSVSYASQEPWLFTGSVRQNILFGQPMDRNRYRQVVRVCALERDFQLLPHGDRTIVGERGVTLSGGQRARISLARAIYKEADIYLLDDPLSAVDTRVGRHLFEDCICGFLVGKTRVLVTHQ 373
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: A0A0D2KA93_9CHLO (ATP-binding cassette, sub-family C (CFTR/MRP), member 2 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KA93_9CHLO) HSP 1 Score: 190 bits (483), Expect = 5.940e-51 Identity = 160/488 (32.79%), Postives = 229/488 (46.93%), Query Frame = 2
Query: 257 VRAEEIRVLLKATLLRAINEAMFFVQPAVLSCLVFATYHLLGNVLTARQVFTTLALLNITQFTMGKFLYLAVQTASESWVSIKRMETILLMEENETLTAPLQEFDLTIKPDKGMPPNPPASXXXXXXXXXXXXXXXXXXXLMASRGGAPTVDEAEMSGAGAGSAPGAAAADAVVGGEAGRESSMPGCVRGVDEQESGXXXXXXXXXXXXDARPGLVSLKGASFRWA---------------SGGEED-----------------QHAKIFRGLMEGDEKKRKAAKDKGISDGAEAAQVEEDNEAEANAGG---LTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSK 1615
+R +E+R + +R +N A+ F V++ + F+TY L L VF L+LLN+ + TM F L VQ +E VS++R++ L M E P + L D+G P A A+ GG P+ ++ +S DA++G ++ G V + + SG + G + L GA + W+ SGG + A G +EGD + +G A+ E +E + TL+ I+L + PG+L+G+ G VG+ KSS+L A+L E+ P A + + + G V GS+AY SQ PWI +G+LR+NILFG+ +D RY AVI CALE+DL LP+GD+T +G+RGVNLSGGQKARV LAR AY+ AD L+DDPLSAVDP VGR LF K
Sbjct: 17 IRKQEVRHSGRMAQIRGLNLALQFAMTPVVAFVTFSTYRALNGKLNVPSVFYALSLLNLPKLTMVYFFVLGVQFLAELKVSLRRIDDFLSMPEPPP---PTHQRGL----DQGAGAAPAAGAEA------------------AAAGGRPSAEKRRLS------------FDALLGRRRSAAANGTGTVLDKEGKSSGV-----------EVPVGGLRLGGADYDWSRNVEQLGLGPRKPTSSGGSSGXXXXXXXXXXXXXXXXPEGAPAADGGVEGDAARSGREAARGAEPNGAASTPAESGASEGRSRRGRRRTLEGIELTVSPGELLGICGEVGAGKSSVLAALLGELQPIREA-----------------DGSLKGGPEVRGSVAYCSQVPWIVAGSLRDNILFGKPLDDARYRAVIAACALEQDLLELPAGDETELGERGVNLSGGQKARVALARAAYSGADVMLLDDPLSAVDPRVGRILFDK 439
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: A0A2J7QE07_9NEOP (Uncharacterized protein (Fragment) n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QE07_9NEOP) HSP 1 Score: 192 bits (487), Expect = 6.110e-51 Identity = 99/191 (51.83%), Postives = 129/191 (67.54%), Query Frame = 2
Query: 1094 TLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 1666
TL + L + PG+LV VVGPVGS K+SLL A+L+E+ S + +SV GS++YASQEPW+ +G++R+NILFG+ MD+ RY V+R CALERD LLP GD+T +G+RGV LSGGQ+AR+ LAR Y A+ YL+DDPLSAVD VGR LF+ +C L+G TR+LVTHQ
Sbjct: 67 TLTDVSLDVRPGELVAVVGPVGSGKTSLLHAILKELPLNSGS------------------------ISVGGSVSYASQEPWLFTGSVRQNILFGQPMDRNRYRQVVRVCALERDFQLLPHGDRTIVGERGVTLSGGQRARISLARAVYKQAEIYLLDDPLSAVDAHVGRHLFNDCICDFLQGKTRLLVTHQ 233
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: UPI001C35670A ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C35670A) HSP 1 Score: 187 bits (475), Expect = 7.070e-51 Identity = 97/191 (50.79%), Postives = 123/191 (64.40%), Query Frame = 2
Query: 1094 TLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 1666
TL + ++P QL+ V+GPVG+ KSSLL A+L E++ ES GV V V G L Y SQ+PWI GT+R NILFG+ ++ ++YD V++ CAL+RD+ LLP GD +GDRG NLSGGQKARV LAR Y AD YL+DDPLSAVD VGR LF + +CG L+ R+LVTHQ
Sbjct: 6 TLQNVTFTVKPEQLLAVIGPVGAGKSSLLSAILGELSQES--GV----------------------VKVKGELTYTSQQPWILPGTIRSNILFGKELNPQKYDRVLKACALKRDMDLLPGGDMAMVGDRGANLSGGQKARVNLARAVYQDADIYLLDDPLSAVDAEVGRHLFEECICGLLRKKPRILVTHQ 172
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Match: F2UNW2_SALR5 (ABC transporter n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UNW2_SALR5) HSP 1 Score: 199 bits (505), Expect = 7.360e-51 Identity = 110/195 (56.41%), Postives = 126/195 (64.62%), Query Frame = 2
Query: 1082 AGGLTLDAIDLRIEPGQLVGVVGPVGSSKSSLLMAVLREIAPESAAGVGGASAAEGGASHGHGERTSELGVSVLGSLAYASQEPWIQSGTLRENILFGRAMDQKRYDAVIRDCALERDLSLLPSGDQTGIGDRGVNLSGGQKARVGLARMAYAHADTYLMDDPLSAVDPAVGRELFSKVVCGRLKGSTRVLVTHQ 1666
AG TL + L I+PG LVGVVGPVGS K++LLM +LRE+ P S+ V G ++YASQEPWI + T+RENILFG A D R AVIR CALERDL LLP G+Q IG+RGV LSGGQKARV LAR Y AD YL+DDPLSAVD VGR LF + +CG L G TRVL THQ
Sbjct: 537 AGNNTLTDVTLDIKPGMLVGVVGPVGSGKTTLLMGMLRELLP------------------------SKGSAGVRGRVSYASQEPWILATTVRENILFGAADDPARRAAVIRACALERDLQLLPGGEQALIGERGVTLSGGQKARVSLARAVYRQADVYLLDDPLSAVDAKVGRVLFEECICGLLAGKTRVLATHQ 707 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10187.307.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10187.307.1 >prot_Ecto-sp8_S_contig10187.307.1 ID=prot_Ecto-sp8_S_contig10187.307.1|Name=mRNA_Ecto-sp8_S_contig10187.307.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=449bp MFFVQPAVLSCLVFATYHLLGNVLTARQVFTTLALLNITQFTMGKFLYLAback to top mRNA from alignment at Ecto-sp8_S_contig10187:3..6299+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10187.307.1 ID=mRNA_Ecto-sp8_S_contig10187.307.1|Name=mRNA_Ecto-sp8_S_contig10187.307.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6297bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10187:3..6299+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10187:3..6299+ >mRNA_Ecto-sp8_S_contig10187.307.1 ID=mRNA_Ecto-sp8_S_contig10187.307.1|Name=mRNA_Ecto-sp8_S_contig10187.307.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1347bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10187:3..6299+ (Ectocarpus species8 EcLAC_412)back to top |