mRNA_Ecto-sp8_S_contig1018.297.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig1018.297.1
Unique NamemRNA_Ecto-sp8_S_contig1018.297.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: A0A6H5JBJ1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 817 bits (2110), Expect = 1.840e-280
Identity = 428/660 (64.85%), Postives = 502/660 (76.06%), Query Frame = 3
Query:  522 CSRCLQTGVRCTYSKRKWHQRQPGXXXXXQHHPRGPAAIQSTA----SSSSAFLACGMLPLKRFRLSASPATGLVGMEENAFLNDFFGCVGFLPLTTPSDIRGAMVRMMSLSTVQQQLGALRDSPDQGQFGTIFTEDDITTGNQLLTGPSCCTFWCAVGIGAVVKGSPVESVANYSRLARDALDAYIGPVNAEVAKAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRIYEGVI--QELSVFSTPPLCASNCAGSQGAQCKEENLPAADKEHRSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWESHQEPAPQISPPVGPSLSPSHLQFESIKGGTSDDTDVFSGVVEGCGGGGGVIAGLMPQVHDMPLTSPDLREVDGTKH--GDDAIAAVDWLELSQAMMDAGDK 2477
            CSRCL++GV+CTYSKRK HQ  P      Q  PRGPA + ST     SSS A  A GMLPLKRFRLSASPATGLVGM+ENAFL+DFFGCVGFLPLTTPS IRG MVRMM+LST   QLGA  DSP+Q QF  I TED ITTG+QL TGPS CTFWCAVG+GA+V GSPVE V NYS LARDAL+AY GPVNAEVAKAWAILGYFYG MGD   + +YL LS SFL DSIE+GSTD+LPAGFAEI+  K TV+VY+G+L AA ++ LGA+R+  PQ  PA  E D++RYV QSHTAFE + F++ CE SAT     +DEPCE++ G   PHGN PQAEEVSDAMV+GL+DGLIDFEHLQE VDR  NIR GIGGLLIN+ LA QKA KGDAGGALER  +CVE+FERYPG+C  MM WC ++  +LGALAAI+DSRAR L+ RLR VYNPSR S SLPAPPLEEW G+SAFC DF+CR +EG+I  Q LSVFSTP LCASNCAGSQGAQCKE+ L AAD++H +SIV A V  E+AT ++M A CSN  K ++ +SSWE +Q+PAPQ+SPPVGPSLS SH+             +   G VEGCGGGG  ++G++  V +M L  P+LR+VDG     GDD I   DWL+++ AM+   D+
Sbjct:   38 CSRCLRSGVQCTYSKRKPHQ--PQTQHQHQRRPRGPACMPSTELLRHSSSGALQASGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAILTEDGITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDALNAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAAYIDFLGARRRDPPQANPAATELDVFRYVTQSHTAFEQLVFEKVCENSATIRPLSDDEPCEDDGGCGSPHGNPPQAEEVSDAMVTGLRDGLIDFEHLQEAVDRS-NIRQGIGGLLINMNLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQALSVFSTPTLCASNCAGSQGAQCKEDYLQAADEQHHTSIVPAGVILENATGTMMDAPCSNGDKPMSSTSSWELNQKPAPQMSPPVGPSLSTSHVHC----------CEPDRGAVEGCGGGG--VSGVVAPVPEMSLRWPELRQVDGVSEETGDDTIVTADWLDVTHAMLGEIDQ 682          
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: D8LU24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU24_ECTSI)

HSP 1 Score: 770 bits (1989), Expect = 3.450e-263
Identity = 401/618 (64.89%), Postives = 468/618 (75.73%), Query Frame = 3
Query:  651 SSSSAFLACGMLPLKRFRLSASPATGLVGMEENAFLNDFFGCVGFLPLTTPSDIRGAMVRMMSLSTVQQQLGALRDSPDQGQFGTIFTEDDITTGNQLLTGPSCCTFWCAVGIGAVVKGSPVESVANYSRLARDALDAYIGPVNAEVAKAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRIYEGVI--QELSVFSTPPLCASNCAGSQGAQCKEENLPAADKEHRSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWESHQEPAPQISPPVGPSLSPSHLQFESIKGGTSDDTDVFSGVVEGCGGGGGVIAGLMPQVHDMPLTSPDLREVDGTKH--GDDAIAAVDWLELSQAMMDAGDK-SPAL 2489
            SSS A LACGMLPLKRFRLSASPATGLVGM+EN FL+DFFGCVGFLPLTTPS IRG MVRMM+LST   +  A  DS DQGQFG IF+ED ITTGNQL  GPS CTFWCAVG+GA+VKGSPVESVANYSRLARDALDAY GPVNAEVA AWAILGYFYG MGD A + +YL L+ SFL DSIE+GST++LPAGFAEI+  + TV+VY+GHL AA ++ LG++R   PQ+ PA  EGD++RY +QS  AFE + F++ACEKS+   H  +DEP EE+ GG  PHG APQAE+VSDAMV GL+DGLIDFEHLQETVDR  NIR GIGGLLIN+ LAFQKA KGDAGGALER G+CVE FERYPG+C  MM WC  +  +LGALAAI  SRAR L+ RLR+VYNPSRP+  LPAPPLEEW G S+FC DF+CR +EG+I  +  ++F  P  C SN    Q   C E+ L   D+EH  SI+SA V PE A  SIM A CSN  K +A +S WE +QEPAPQ+ PPVGPSLS SH+       G    TD++SG VEGCGGG  V+AGL+  V DM L  P+L +VDG     GDD IAA DWL+++ AM+ A D+  PAL
Sbjct:   10 SSSGALLACGMLPLKRFRLSASPATGLVGMQENTFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPDASYDSLDQGQFGAIFSEDGITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAMAWAILGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTNILPAGFAEIIRLEQTVKVYTGHLDAAYIDFLGSRRGDPPQVNPAANEGDLFRYFSQSLNAFEELVFEKACEKSSIRRHLSDDEPWEEDRGGGSPHGAAPQAEDVSDAMVMGLQDGLIDFEHLQETVDRS-NIRKGIGGLLINMYLAFQKAGKGDAGGALERLGHCVEAFERYPGVCRCMMLWCHASHSILGALAAIKSSRARELYNRLRDVYNPSRPASFLPAPPLEEWHGTSSFCDDFQCRCFEGIIASRARNLFPAPSDCTSNNTDQQQTNCTEDYLEVVDEEHDGSIISAGVIPEKAIGSIMDAPCSNGDKPMASTSLWELNQEPAPQMGPPVGPSLSTSHVHCCGPDTGGGSGTDIYSGAVEGCGGG--VLAGLVAPVPDMSLRLPELTQVDGVPEETGDDTIAAADWLDVTHAMLGAFDQIDPAL 624          
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: D8LU19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU19_ECTSI)

HSP 1 Score: 731 bits (1888), Expect = 7.850e-250
Identity = 390/533 (73.17%), Postives = 426/533 (79.92%), Query Frame = 3
Query:  681 MLPLKRFRLSASPATGLVGMEENAFLNDFFGCVGFLPLTTPSDIRGAMVRMMSLSTVQQQLGALRDSPDQGQFGTIFTEDDITTGNQLLTGPSCCTFWCAVGIGAVVKGSPVESVANYSRLARDALDAYIGPVNAEVAKAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRIYEGVI--QELSVFSTPPLCASNCAGSQGAQCKEENLPAADKEH-RSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWESHQEPAPQISPPVGPSLSPSHLQFESIKGGT 2270
            ML LKRFRLSASPATGLVGM+ENAFL+DFFGCVG LPLTTPS IRG MV+MM+  TVQQQLGAL DS +QGQFG IF+ED ITTGNQLLTGPSCCTFWCAVG+GAV+KGSPVESVANYSRLARDALDAY GPVNAEVAKAWAILGYF+GSMGDMANY++YLKLSGSFL+DSIE+GSTDMLPAGFAEI+ QKD VQVYSGHL A G+E L AQRQ APQIKPA CEGD+YRYVAQS TAFE   F+RACE +AT   SRE+E CE+N  GAIPH NAPQAEEVS  MV+ LKDGLIDFEHLQE  DR PNIRTGIGGLLIN+                                       C LAQ VLGALAAIDDSRARGL+ RLREVYNPSRPS+SLPAPPLEEW GISAFC DF+CRIYE +I  Q L+VFSTPPL AS+CAGSQ  Q  E+NL A DKE  R SIVSA VTP DAT S M ASCSNA K +AC+SS ESHQ PAP++ PPVGPSLSPS L F+S++GGT
Sbjct:    1 MLSLKRFRLSASPATGLVGMQENAFLSDFFGCVGLLPLTTPSHIRGVMVKMMTGPTVQQQLGALHDSLEQGQFGAIFSEDGITTGNQLLTGPSCCTFWCAVGVGAVLKGSPVESVANYSRLARDALDAYKGPVNAEVAKAWAILGYFHGSMGDMANYVEYLKLSGSFLMDSIEQGSTDMLPAGFAEIIRQKDNVQVYSGHLDATGIESLVAQRQDAPQIKPAACEGDLYRYVAQSLTAFEQDVFERACENTATRRQSRENEACEDNRSGAIPHDNAPQAEEVSAIMVAALKDGLIDFEHLQEIADR-PNIRTGIGGLLINM---------------------------------------CHLAQCVLGALAAIDDSRARGLYARLREVYNPSRPSYSLPAPPLEEWRGISAFCDDFQCRIYECIITSQALTVFSTPPLWASDCAGSQRTQRTEDNLQAVDKEEDRGSIVSAGVTPGDATGS-MSASCSNADKPMACTSSCESHQGPAPEVCPPVGPSLSPSDLHFDSVRGGT 492          
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE)

HSP 1 Score: 715 bits (1846), Expect = 1.190e-240
Identity = 394/667 (59.07%), Postives = 469/667 (70.31%), Query Frame = 3
Query:  522 CSRCLQTGVRCTYSKRKWHQRQPGXXXXXQHHPRGPAAIQST----ASSSSAFLACGMLPLKRFRLSASPATGLVGMEENAFLNDFFGCVGFLPLTTPSDIRGAMVRMMSLSTVQQQLGALRDSPDQGQFGTIFTEDDITTGNQLLTGPSCCTFWCAVGIGAVVKGSPVESVANYSRLARDALDAYIGPVNAEVAKAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRIYEGVI--QELSVFSTPPLCASNCAGSQGAQCKEENLPAADKEHRSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWESHQEPAPQISPPVG--PSLSPSHLQFESIKGGTSDDTDVFSGVVEGCGGGGGVIAGLMPQVHDMPLTSPDLREVDGTKHG--DDAIAAVDWLELSQAMMD-AGDKSPAL 2489
            CSRCL+ GVRCTYSKRK HQ Q G     Q  PRGPA +Q+      S+S   L  GMLPLKR +LSASPATGLVGM+ENAFL+DFFGCVGF+P T+ S IRGAMVRMM+ ST Q Q GA  +SP+Q QFG  FTED IT GNQLLTGPSCCTFWCAVG+GA+ KGSPVESVANYSRLARDA+DAY GPV+A+VA+AWAILGYFYG MGD A + +YLKLS SFLI SIE+GST  LP+GF EIV  K+ V+V+ G++ A        + Q  PQI PA  E D++R+VAQS  AF  +  + AC K AT   S +D P EE+ G A PHGNAP+ EE+SDAMV+G K GL+DFE+LQE VD  PN+RTG+GG LIN+ L F +AA GDA G LE+ G+CVE+ ERYPG+C  M+ WC L    L ALAA+DD RARGL+ RLRE YN  RPS SLPAPPLE W G+SAFC  F C ++ GVI  + LSVF+TPP  + N AG Q    K E++P  D+EH   IV   VTPE+ATSSIM   CSN  K +A +SSWE + E A Q+SPP    PS S  H + ES K G    TD+FS  VE CG    V +G+M Q  D   T P+LRE+DGT     DDAIA  DWL+ + AM+D  GDKSP +
Sbjct:   38 CSRCLRAGVRCTYSKRKPHQPQLGRQH--QRRPRGPAGVQTADMFRPSASGTLLPGGMLPLKRLKLSASPATGLVGMQENAFLSDFFGCVGFMPFTSRSHIRGAMVRMMARSTAQHQPGARHNSPEQSQFGDTFTEDGITPGNQLLTGPSCCTFWCAVGMGALAKGSPVESVANYSRLARDAMDAYTGPVDADVAEAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKECVKVFCGNVDAVDTGSF-TRHQDRPQINPAATEEDVFRFVAQSVEAFVQLVVEEACGKRATRSCSSDDGPYEEDRGDASPHGNAPRVEEISDAMVTGFKIGLLDFENLQEAVDL-PNVRTGMGGFLINMNLVFHRAANGDAVGMLEKIGHCVEVLERYPGVCRFMLGWCHLVHAALAALAAMDDCRARGLYNRLREAYNQFRPSASLPAPPLEAWQGLSAFCDHFHCMLFGGVIASERLSVFTTPPYSSRNGAGFQQDHLKGEDVPVVDEEHHIGIVWGGVTPEEATSSIMDVLCSNGDKPMASTSSWEWNHERALQMSPPARSRPSSSNVHRR-ESSKDGIQF-TDLFSNEVERCGED--VFSGVMAQYPDDGFTLPELRELDGTTQDTMDDAIAVPDWLDTTHAMLDEVGDKSPGI 696          
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: D8LU25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU25_ECTSI)

HSP 1 Score: 705 bits (1819), Expect = 1.010e-237
Identity = 371/613 (60.52%), Postives = 441/613 (71.94%), Query Frame = 3
Query:  651 SSSSAFLACGMLPLKRFRLSASPATGLVGMEENAFLNDFFGCVGFLPLTTPSDIRGAMVRMMSLSTVQQQLGALRDSPDQGQFGTIFTEDDITTGNQLLTGPSCCTFWCAVGIGAVVKGSPVESVANYSRLARDALDAYIGPVNAEVAKAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRIYEGVI--QELSVFSTPPLCASNCAGSQGAQCKEENLPAADKEHRSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWESHQEPAPQISPPVGPSLSPSHLQFESIKGGTSDDTDVFSGVVEGCGGGGGVIAGLMPQVHDMPLTSPDLREVDGTKH--GDDAIAAVDWLELSQAMMDAGDK 2477
            SSS   L CGMLPLKRFRL+ASPATGLVGM+EN FL+DFFGCVGFLPLTTPS IRG MVRMM+LST   +  A  DS DQGQFG IF+ED ITTGNQL  GPS CTFWCAVG+GA+VKGSPVESVANYSRLARDALDAY GPVNAEVAKAWAI GYFYG MGD A + +YL L+ SFL DSIE+GSTD+LPAGFAEI+  K TV+VY+G+L AA ++ LG++R+  PQ+ PA  EGD+YRY  Q+  AFE + F++A                 E+ GG   HG  PQAE+VSDAMV+ LKDGLIDF HLQETVDR PNIR GIGGLL+N+ LAF KA  GD GGA ER  +CVE+FERYPG+C  MM WC ++  +L ALAAI  SRAR L+ RL       RP+  LPAPPL+EW G SAFC DF+CR +EG+I  Q  S+F  P  C+SN    Q   C E++L  AD++H   IVSA V PE+A  SIM A CSN  K +A +SSWE +QEPA  +SPPVGPSLS SH+  E  +G  S   D  SG VEGCGGG  V++GL+  V D+ L  P+LR+ DG     G+D IA  DWL+++ AM+ A D+
Sbjct:   10 SSSGVLLDCGMLPLKRFRLNASPATGLVGMQENVFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHRPDASYDSLDQGQFGAIFSEDGITTGNQLSAGPSACTFWCAVGVGALVKGSPVESVANYSRLARDALDAYTGPVNAEVAKAWAISGYFYGFMGDTATFQEYLGLADSFLTDSIERGSTDILPAGFAEIIRLKQTVKVYAGNLDAAYIDFLGSRRREPPQVNPAANEGDLYRYFCQASAAFEELVFEKAXXXXXXXXXXXXXXXXXEDRGGGSSHGADPQAEDVSDAMVTALKDGLIDFGHLQETVDR-PNIRKGIGGLLMNMALAFLKATNGDTGGAFERLEHCVEVFERYPGVCRCMMLWCHVSHSILAALAAIKSSRARELYNRLXXXXXXFRPASFLPAPPLDEWRGTSAFCDDFQCRCFEGIIASQARSIFPAPSNCSSNNTDLQQTHCTEDSLEVADEDHDGGIVSAGVIPENAIGSIMAAPCSNGDKPMASTSSWELNQEPALPMSPPVGPSLSTSHVHCEPDRGAASGP-DACSGAVEGCGGG--VLSGLVAPVPDVSLRLPELRQADGVPEDPGEDTIATADWLDVTHAMLGAIDR 618          
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: D7FTG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTG5_ECTSI)

HSP 1 Score: 680 bits (1755), Expect = 2.060e-230
Identity = 351/476 (73.74%), Postives = 394/476 (82.77%), Query Frame = 3
Query: 1074 PVNAEVAKAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRIYEGVI--QELSVFSTPPLCASNCAGSQGAQCKEENLPAADKEHRSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWESHQEPAPQISPPVGPSLSPSHLQFESIKGGTSDDTDVFSGVVEGCGGGGGVIAGLMPQVHDMPLTSPDLREVDGTKHGDDAIAAVDWLELSQAMMDAG-DKSPALR 2492
            PV +   +AWAILGYF+GSMGDMANY +YLKLSGSFLIDS+++GSTDMLPAGFAEIV QKDTVQVYSGHL AAG+E LG  RQ APQIKPA CEGD+YRYVAQSH AFE V F+RAC+ SAT  H +EDEPCE+N GGAIPHG+APQAEEVSD MV+ LK+GL+DFEHLQET DR PNIRTG+GGLLINITLAFQKA  GDA GAL+RFG+C+E+FERYPGLC   + WC LA  +LG+LAAIDDSRARGL++RLREVYNPSR S SLPAPPLEEW GISAFC  F CRI+EGVI  Q LSVFST PLCA + AGSQG    E+NL   + EHRSSI SA VTPEDAT SIMVASCSNA K +AC+SSWESHQEPA Q+S PVGPS+ P ++  E +KGGTSDDTDV SG +EGCG GG VIAG +P V DMPLTSP LREVDGT  GDD + A DWL++SQAMMDAG DK  ALR
Sbjct:    7 PVASPRVRAWAILGYFHGSMGDMANYEEYLKLSGSFLIDSMQQGSTDMLPAGFAEIVSQKDTVQVYSGHLDAAGIESLGTLRQDAPQIKPAACEGDLYRYVAQSHAAFEQVVFERACQNSATRRHPKEDEPCEDNGGGAIPHGSAPQAEEVSDTMVAALKNGLMDFEHLQETADR-PNIRTGVGGLLINITLAFQKAVNGDAAGALKRFGHCIEVFERYPGLCRYRILWCHLAHGILGSLAAIDDSRARGLYSRLREVYNPSRLSSSLPAPPLEEWRGISAFCDHFLCRIFEGVIARQALSVFSTQPLCARSGAGSQGT---EDNLQTVEYEHRSSIGSAGVTPEDATGSIMVASCSNANKPMACTSSWESHQEPASQMSLPVGPSVFPLNVHSEPVKGGTSDDTDVLSGAIEGCGSGG-VIAGSVPHVPDMPLTSPGLREVDGTTTGDDVLTASDWLDISQAMMDAGEDKDAALR 477          
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: D8LU17_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU17_ECTSI)

HSP 1 Score: 614 bits (1584), Expect = 4.650e-204
Identity = 319/474 (67.30%), Postives = 347/474 (73.21%), Query Frame = 3
Query:  522 CSRCLQTGVRCTYSKRKWHQRQPGXXXXXQHHPRGPAAIQSTASSSSAFLACGMLPLKRFRLSASPATGLVGMEENAFLNDFFGCVGFLPLTTPSDIRGAMVRMMSLSTVQQQLGALRDSPDQGQFGTIFTEDDITTGNQLLTGPSCCTFWCAVGIGAVVKGSPVESVANYSRLARDALDAYIGPVNAEVAKAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRI 1943
            CSRCL+ G RCTY+KRKWHQRQPG     QH   GPAA+ ST SSS    A GML LKRFRL ASPATGLVGM+ENAFLNDFFGCVG LPLTTPS IRGAMVRMM+  T Q QLGAL DSP QGQFG IFTED                                                           AWAILGYF+GS GDMA+Y++YLKLS SFL+DS+E+GSTDMLPAGFAEIV QKDTVQVYSGHL AAG+E  GAQRQ APQIKPA C+GDIYRYVAQS T F+ V F+RAC+ SAT  H  EDEPCE+N  GA PHGNAPQAEEVSDAMV GLKDGLIDFEHL++TVDR P IRTG+GGLLIN+TLAFQKAAKGDAGG LER G CVE+FE YPG+C  M  WC LA  VLGALAAIDDS +RGL+TRLREVYNPSRPS SLPAPP EEW GISAFC DF+C +
Sbjct:  112 CSRCLKAGARCTYTKRKWHQRQPGHRQ--QHQSNGPAAMHSTDSSSGTLPAGGMLALKRFRLGASPATGLVGMQENAFLNDFFGCVGLLPLTTPSHIRGAMVRMMTGPTAQHQLGALHDSPAQGQFGAIFTED-----------------------------------------------------------AWAILGYFHGSTGDMADYVEYLKLSDSFLMDSVEQGSTDMLPAGFAEIVSQKDTVQVYSGHLDAAGIESFGAQRQHAPQIKPAACDGDIYRYVAQSQTRFQQVVFERACQNSATRRHLGEDEPCEDNRAGAFPHGNAPQAEEVSDAMVVGLKDGLIDFEHLEDTVDR-PYIRTGVGGLLINMTLAFQKAAKGDAGGTLERLGRCVEVFELYPGVCRYMTLWCHLAHSVLGALAAIDDSSSRGLYTRLREVYNPSRPSSSLPAPPWEEWRGISAFCDDFQCSL 523          
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: D8LU28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU28_ECTSI)

HSP 1 Score: 574 bits (1479), Expect = 4.550e-188
Identity = 306/496 (61.69%), Postives = 370/496 (74.60%), Query Frame = 3
Query: 1002 KGSPVESVANYSRLARDALDAYIGPVNAEVAKAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRIYEGVI--QELSVFSTPPLCASNCAGSQGAQCKEENLPAADKEHRSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWESHQEPAPQISPPVGPSLSPSHLQFESIKGGTSDDTDVFSGVVEGCGGGGGVIAGLMPQVHDMPLTSPDLREVDGTKHG--DDAIAAVDWLELSQAMMDAGDK 2477
            + + +E VANY +LARDALDAY GPVNAEVAKAWAILGY Y  MGD   Y +YLKLS SFLIDSIE+GSTDMLPAGFAE+V  K+T + YSG++ A     LGA  Q   QI PA  EGD++RYVAQS  AFE V F+++CE SA   HS +D+ C+E +GGA P G+ PQ EEVSDAMV+G KDGLI+FE+LQ+TVDR PN+ TGI GLLIN+TLA+QKAA GDAGGALERFG CV++FERYPG+C  M  WC +A  +LG+LAAIDDSRA GL+ RLR+VYNPSRPS SLPAPPLEEW GISAFC DF+CR+ EG+I  Q  SVFS P  C SNC GSQ  +C+E +L   D+E  SS+VS   TPE AT SIM A  +N  K +A + SWE + EP PQ SP VGPSLSPSHL  + ++GG SD TDV +  V  CGGG  V++GL+ QV D+ LTSP L ++DG +    DD IAA DWL+++ AM+DA D+
Sbjct:   68 RHAAIEEVANYLQLARDALDAYTGPVNAEVAKAWAILGYLYSYMGDTEKYEEYLKLSASFLIDSIEQGSTDMLPAGFAEMVHHKETAKAYSGNVDATDNGSLGAHHQHPLQINPAASEGDVFRYVAQSLIAFEQVVFEKSCENSAARRHSSDDKLCDETTGGATPLGHTPQVEEVSDAMVAGFKDGLIEFEYLQDTVDR-PNVGTGIVGLLINMTLAYQKAANGDAGGALERFGQCVDVFERYPGVCRCMF-WCHIAHGILGSLAAIDDSRAGGLYNRLRDVYNPSRPSSSLPAPPLEEWRGISAFCDDFQCRLTEGMIASQAFSVFSAPTHCTSNCTGSQN-ECEEASLQFVDEEQNSSMVSVGATPEVATGSIMDAPRTNGDKPMASNYSWELNLEPTPQTSPTVGPSLSPSHLHCKPVRGGESD-TDVLNSAVVECGGG--VLSGLVGQVPDVSLTSPLLGDIDGAREEIWDDTIAAADWLDVTHAMLDATDE 557          
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: D8LU21_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU21_ECTSI)

HSP 1 Score: 544 bits (1402), Expect = 4.640e-176
Identity = 323/667 (48.43%), Postives = 397/667 (59.52%), Query Frame = 3
Query:  522 CSRCLQTGVRCTYSKRKWHQRQPGXXXXXQHHPRGPAAIQST----ASSSSAFLACGMLPLKRFRLSASPATGLVGMEENAFLNDFFGCVGFLPLTTPSDIRGAMVRMMSLSTVQQQLGALRDSPDQGQFGTIFTEDDITTGNQLLTGPSCCTFWCAVGIGAVVKGSPVESVANYSRLARDALDAYIGPVNAEVAKAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRIYEGVI--QELSVFSTPPLCASNCAGSQGAQCKEENLPAADKEHRSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWESHQEPAPQISPP--VGPSLSPSHLQFESIKGGTSDDTDVFSGVVEGCGGGGGVIAGLMPQVHDMPLTSPDLREVDGTKHG--DDAIAAVDWLELSQAMMDA-GDKSPAL 2489
            CSRCL  GVRCTY KRK HQ QPG     Q  PRGPA +Q+      S+S   LAC MLPLKR +LSASPATGLVGM+EN FL+DFFGCVGF+P TT                                                                                                  +AWAILGYFYG MGD A + +YLKLS SFLI SIE+GST  LP+GF EIV  K++V+VY G++ A  ++   A+RQ  PQI PA  E D++R+VAQS  AF  +    ACEK A    S +D P EE+ G A PH NAP+AEE+SDAMV+G K GL+DFE+LQE VDR PN+RTG+GG LIN+ L F +AA GDA G +E+ G+CVE+ ERYPG+C  M+QWC L    L ALA +DDSRARGL+ RLRE YNP RP  SLPAPPLEEW G++AFC  F+CR+  GVI  + LS F+TPP C+ N A  Q A  K+E +P  D+EH S IV A VTPE+ATSS M A CS+  K+++ +SSWE + E A Q SP   +GPS S  H +  S +G     TD+FS  VE CG    V++G++ Q  D+ LTSP+LREVDGT     DDAIA  DWL+ + AM+D    KSP +
Sbjct:   38 CSRCLGAGVRCTYRKRKPHQPQPGRQH--QRRPRGPAGMQTADLLRLSASGTLLACRMLPLKRLKLSASPATGLVGMQENTFLSDFFGCVGFMPFTT-------------------------------------------------------------------------------------------------RRAWAILGYFYGFMGDTATFEEYLKLSDSFLIASIEQGSTGTLPSGFPEIVHYKESVKVYCGNVDAVDIDFF-ARRQDRPQINPAANEEDVFRFVAQSLEAFVQLVVAEACEKRAIRSCSSDDGPYEEDIGSASPHSNAPRAEEMSDAMVTGFKVGLLDFENLQEAVDR-PNVRTGMGGFLINMNLVFHRAANGDAVGMVEKLGHCVEVLERYPGVCRCMLQWCHLVHAALAALAVMDDSRARGLYNRLREAYNPFRPPASLPAPPLEEWQGLAAFCDHFQCRLVAGVIASERLSAFTTPPDCSRNDASFQQAHLKKEGVPVVDEEHHSDIVWAGVTPEEATSSNMDALCSSGDKSMSSTSSWEWNHERALQASPTARLGPSSSHVHRRESSKRG--IHGTDLFSNEVERCGED--VVSGVVAQFPDVGLTSPELREVDGTTQEAVDDAIAVADWLDTTHAMLDEISYKSPGI 599          
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Match: D8LU23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU23_ECTSI)

HSP 1 Score: 516 bits (1328), Expect = 8.410e-167
Identity = 274/466 (58.80%), Postives = 333/466 (71.46%), Query Frame = 3
Query: 1095 KAWAILGYFYGSMGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGHLGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEKSATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHLQETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERYPGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLPAPPLEEWGGISAFCGDFRCRIYEGVI--QELSVFSTPPLCASNCAGSQGAQCKEENLPAADKEHRSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWESHQEPAPQISPPVGPSLSPSHLQFESIKGGTSDDTDVFSGVVEGCGGGGGVIAGLMPQVHDMPLTSPDLREVDGTKHG--DDAIAAVDWLELSQAMMDAGDKS 2480
            +AWAILGYFYG MGD   + +YL L+ SFL DSIE+GSTD+LPAGFAEIV  K TV+ YSG+L  A  + L A+RQ  P++ PA  EGD++RY +QS TAFE + F++ACEKSA   H   DEPCEE    A PHGN PQ EEVSDAMV  LK GL+DFEHLQE VDR PNIR GIGGLLIN+ LAFQKA  GD GGALERFG+CVE+FERYPG+C  M+ WCR++  +LGALAAIDDSRAR L+ RLR+VYNPSRP+  LPAPPLEEW G SAFC DF+CR+++G+I  Q  SVFS+PP C SN AG    Q +E+++P  D+E    I  A V P++ T S+MV  CSN  K VA  SSW  +QEPAPQ +PP G S S SHL  E  +GG S  T +F+  VEGCGGG   ++GL+ QV  M L   +LR+ DG   G  DD IA  DWL++S  M+ A D++
Sbjct:   25 RAWAILGYFYGFMGDTGMFQEYLGLADSFLTDSIERGSTDILPAGFAEIVHHKQTVKAYSGNLDPAHDDSLAARRQHLPEVNPAANEGDLFRYFSQSQTAFEELVFEKACEKSAARRHLSADEPCEEGRCDANPHGNVPQVEEVSDAMVIALKAGLLDFEHLQEAVDR-PNIRKGIGGLLINVNLAFQKATNGDTGGALERFGHCVEVFERYPGVCRCMILWCRMSHSLLGALAAIDDSRARELYNRLRDVYNPSRPASFLPAPPLEEWRGTSAFCDDFQCRLFDGIIASQAFSVFSSPPDCTSNYAG---LQHEEDDVPVVDEERDGGIAWAGVIPKEVTGSVMVTPCSNGVKPVASPSSWALNQEPAPQTNPPAGSSPSTSHLHRELGRGGASG-TAIFNSAVEGCGGG--ALSGLVGQVPGMSLAWQELRDADGFPDGTGDDTIAEADWLDVSLVMLGAIDEN 483          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1018.297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBJ1_9PHAE1.840e-28064.85Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU24_ECTSI3.450e-26364.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU19_ECTSI7.850e-25073.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8E7_9PHAE1.190e-24059.07Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU25_ECTSI1.010e-23760.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTG5_ECTSI2.060e-23073.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU17_ECTSI4.650e-20467.30Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU28_ECTSI4.550e-18861.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LU21_ECTSI4.640e-17648.43Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LU23_ECTSI8.410e-16758.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1018contigEcto-sp8_S_contig1018:1684..13880 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size4000
Hectar predicted targeting categoryother localisation
Exons12
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-21_000580.1
Cds size1818
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143115.8379767-UTR-Ecto-sp8_S_contig1018:1683..31851681143115.8379767-UTR-Ecto-sp8_S_contig1018:1683..3185Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1018 1684..3185 -
1681143115.9489727-UTR-Ecto-sp8_S_contig1018:13200..138801681143115.9489727-UTR-Ecto-sp8_S_contig1018:13200..13880Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1018 13201..13880 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143115.8461235-CDS-Ecto-sp8_S_contig1018:3185..37441681143115.8461235-CDS-Ecto-sp8_S_contig1018:3185..3744Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 3186..3744 -
1681143115.8532612-CDS-Ecto-sp8_S_contig1018:8356..85361681143115.8532612-CDS-Ecto-sp8_S_contig1018:8356..8536Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 8357..8536 -
1681143115.8627539-CDS-Ecto-sp8_S_contig1018:8875..89921681143115.8627539-CDS-Ecto-sp8_S_contig1018:8875..8992Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 8876..8992 -
1681143115.870333-CDS-Ecto-sp8_S_contig1018:9213..92581681143115.870333-CDS-Ecto-sp8_S_contig1018:9213..9258Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 9214..9258 -
1681143115.87768-CDS-Ecto-sp8_S_contig1018:9468..97311681143115.87768-CDS-Ecto-sp8_S_contig1018:9468..9731Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 9469..9731 -
1681143115.8850434-CDS-Ecto-sp8_S_contig1018:10493..106011681143115.8850434-CDS-Ecto-sp8_S_contig1018:10493..10601Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 10494..10601 -
1681143115.8975968-CDS-Ecto-sp8_S_contig1018:11206..112901681143115.8975968-CDS-Ecto-sp8_S_contig1018:11206..11290Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 11207..11290 -
1681143115.9048336-CDS-Ecto-sp8_S_contig1018:11521..115671681143115.9048336-CDS-Ecto-sp8_S_contig1018:11521..11567Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 11522..11567 -
1681143115.9121482-CDS-Ecto-sp8_S_contig1018:12013..120871681143115.9121482-CDS-Ecto-sp8_S_contig1018:12013..12087Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 12014..12087 -
1681143115.922159-CDS-Ecto-sp8_S_contig1018:12294..125111681143115.922159-CDS-Ecto-sp8_S_contig1018:12294..12511Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 12295..12511 -
1681143115.9294343-CDS-Ecto-sp8_S_contig1018:12678..127861681143115.9294343-CDS-Ecto-sp8_S_contig1018:12678..12786Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 12679..12786 -
1681143115.9374595-CDS-Ecto-sp8_S_contig1018:13183..132001681143115.9374595-CDS-Ecto-sp8_S_contig1018:13183..13200Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1018 13184..13200 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1018.297.1prot_Ecto-sp8_S_contig1018.297.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig1018 3186..13200 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig1018.297.1

>prot_Ecto-sp8_S_contig1018.297.1 ID=prot_Ecto-sp8_S_contig1018.297.1|Name=mRNA_Ecto-sp8_S_contig1018.297.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=606bp
MLPLKRFRLSASPATGLVGMEENAFLNDFFGCVGFLPLTTPSDIRGAMVR
MMSLSTVQQQLGALRDSPDQGQFGTIFTEDDITTGNQLLTGPSCCTFWCA
VGIGAVVKGSPVESVANYSRLARDALDAYIGPVNAEVAKAWAILGYFYGS
MGDMANYMKYLKLSGSFLIDSIEKGSTDMLPAGFAEIVGQKDTVQVYSGH
LGAAGVELLGAQRQCAPQIKPAVCEGDIYRYVAQSHTAFELVAFKRACEK
SATGGHSREDEPCEENSGGAIPHGNAPQAEEVSDAMVSGLKDGLIDFEHL
QETVDRRPNIRTGIGGLLINITLAFQKAAKGDAGGALERFGNCVEIFERY
PGLCGSMMQWCRLAQYVLGALAAIDDSRARGLHTRLREVYNPSRPSFSLP
APPLEEWGGISAFCGDFRCRIYEGVIQELSVFSTPPLCASNCAGSQGAQC
KEENLPAADKEHRSSIVSADVTPEDATSSIMVASCSNAGKAVACSSSWES
HQEPAPQISPPVGPSLSPSHLQFESIKGGTSDDTDVFSGVVEGCGGGGGV
IAGLMPQVHDMPLTSPDLREVDGTKHGDDAIAAVDWLELSQAMMDAGDKS
PALRF*
back to top

mRNA from alignment at Ecto-sp8_S_contig1018:1684..13880-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig1018.297.1 ID=mRNA_Ecto-sp8_S_contig1018.297.1|Name=mRNA_Ecto-sp8_S_contig1018.297.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=12197bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1018:1684..13880- (Ectocarpus species8 EcLAC_412)
CCTATACCGAACAATCTCGGGATGCGCAGGAGCTGCTTGGAATGTGCGCG AAGGAAAAAGAAGTGCGATGGCCTGACGCCTTGCAGGTGTGTTGTGTATC GACATGGACATTGGCCATGATGTTGCTGCTGAAGGCACGATGCTCCGTTT CGTTTCTAAGGGGTTGAATGCAATCAACCTTGATCTTCTCTGAACGTGGT AACAACCGAAAAGAGCGCTAGCCAAACAATCGCACAGATACACGTGGGTC GTGTTAAGAAAACGTCGGTGATCTTTAAACAGGAGCTCGGGCCCACCACG TCGGTTTAGGAACCCGGCGTGGTTTTTGCCCGCCAATATGACCACGCTGA TGCGCTCCGCGCCACGCCGCGCAACTGGCACACTTCTTGCATCGGTAACT GCAAGGTATACCACTACCGGAAATTTGATGGAACGCAACTGTTTAGACAA TCGACGGCCCGGACCTACAAAAACCGTGCGTCAGTGAACGTACCACCGTG ACCCCCGTCACGTGCGTACTGTGTAGCCGTTGCCTACAAACTGGGGTTCG ATGCACTTACAGCAAGCGGAAGTGGCACCAGCGTCAGCCTGGGCACCAGT CTCAGCCTCAGCACCATCCACGTGGTCCTGCTGCCATACAGTCGACCGCC TCATCATCCAGCGCATTCCTAGCCTGCGGCATGCTACCTTTAAAGAGGTC AGTCGTATTTAACTGCAATAGAAAAAAATACACGCGGTCATCTTCAGCTT GTATCACACAGACTGTCTGCAGTCTGCAACATCGCACCCCAGCTTCATCG TAGCAACTTCCAGAGAATATGGGCGCAGGAAAAAGAAGAGCGACACCGTG TTGAAATAAATTACTCCTCATCGCCTTTGTCGCATACCGGACTTGTGTGA GCTTCACCGTCGACCAGCACGTCCAAACACATTTTTGACGTGGGGTGCAT CGAACCCGCAGGTATGAGCTGAAGGAGGACTAAGGCTGTTGTCGACGTCG AAGAGACCTCCACGTCTGGCGTGTCATATCGGGCGAGAGCTTTTCGCATG ATCTTACCGTGTCTAAAGACATTATCTGCTATCTGCTATACCAGGTTCAG ATTGAGCGCATCTCCGGCGACTGGTCTGGTGGGCATGGAGGAGAACGCAT TCCTCAATGACTTCTTCGGCTGCGTTGGGTTCCTGCCCCTCACCACCCCA AGGTGCAGATCTAGCGTTGATGGAATATACTGAAGGGCGCACTGCCGCCG GGAGTACCCGTATTGTCCCGTACGTTACCCCATATTTTCCAGGACAGGCT GCGACTGGCAACTCGTAAACAGTCAATCGTACAATTCCAGATTCCTTCGC GATTCACTATTGCCGCCAGTGACATTCGTGGAGCGATGGTGAGGATGATG AGCCTCTCCACTGTCCAACAACAACTGGGCGCTCTGCGCGACTCCCCCGA TCAAGGCCAGTTCGGCACCATCTTCACCGAGGATGACATCACCACGGGAA ATCAGCTCTTGACGGGCCCCTCGTGTTGCACATTTTGGTGTGCAGTTGGT ATTGGGGCTGTTGTGAAGGGAAGCCCTGTTGAATCGGTGAGAACATGCCG CATTTGGTTTGGCCTACCCTTTACGAGTAGAAGCACCGTTGTTTTCCCGT CGCGTTGTGGCGCTGATCCTTGCTTGGTACCACCGCAGATTGCTGCGTGC AGCTGCCGACGAACCAAAATGTTTGCTACTACCGACGGCGCTAGGCAAAA CATCGCACGCGAATTGCAACACGTCCAACATGTATCACGAAAGGTTGCGA ACTACTCCCGACTGGCGAGAGATGCTCTGGACGCCTACATAGGCCCTGTG AATGCCGAGGTGGCAAAGTGAGTTACGCGGACAAGTTGAATGCATCACGG GAGCAATTCACACCGGGACGCATAGGCTTTTGTTTGGTATGCGTGGCAAC GTGTCTGCCGGAGGTGTTGGTTCTTACAATTTTTGCCATTTCGGCCATGT ACATAGTTAGCAATCTGCCTTCCTGGGAAGGCAGTCAAATCTTAGTACCG AATGCCACACGAGATTCAACACGCCTTGCACAGCTTTCGTAGAGGTCGAT TTCTCCTCATCAGTGAGGTGGGCAATACCGACAGATGCGTCCTTGGACAG CTGTAAACGGTAAACTTTCAGTGCCACCGTTTGGACATGAACGCTACTTT GACGAACTCCGGCGTTTAAACTCAGTCTAAGAAGTGTAGAATCTTGTGTG GCATACGGTGGTCCTCCCCGTTCGGCTCCTTACACCGCAACCCGTCGCCC CTCCCCGCGTCAGAGCGTGGGCGATCCTGGGATACTTCTACGGTTCCATG GGAGACATGGTGAGGTCGCTTCGGTGGGAGATACGGCACCCTTGGTAGTT GTGCCCGCGTCGTGCACACGAGTAGCACATCCTCTTGCCCGTCGAAAGAG CCGATCGCTTAGCCACCGCATTATTCCCATTGTCAACGACACACAATATC GCTGGAAATGGTTTCCTCCCACTGGACGTTATCATTTGACCCACCCATGT ATGATTGCCGCTAATGTCCGTCCGTGTTTCTGTGCTTCAGGCGAATTATA TGAAGTACCTGAAGCTTTCGGGCTCCTTTTTGATTGATTCCATCGAGAAA GGGTCAACCGACATGCTGCCAGCGGTGAGTGTGACGCCAATACGTTTTGT TGGACTGCAGCAAGGCCTAGAGCTCCTTTCCTGCCTTGCTTCTCAGGTTG GCCAGAGGTTGAGATCGACGAAAAGTGTGGCTGTTCGTAACAGGAACATG GCTGCATGGACAGAGTAGACTGACAGCACGGCCGGCTTCCCAAAAAGGAG ATTCAGGTCGTTCCGGTCCTACGCCTGATGAGCACTTTTCTCGATGAGCA TCTTGTTGGTTGTGTGCAAGGGATCATCCCCGCAGCTCCTCTGCGAAAGT ACTGCAGTACTCACAGAGGTGGGTTGATGCACTTGGTGGCTGCAGCATCG CAATGCTCAGACGTTGGCATCCCGATCACGGCGCTAGCGTCTTGCTCCTC CTGCTTCATGGCACTCAGTCGTCCGACGACGGCTCCATGTTTTTCATCGC CGAATGACGCGGCGGTGACGTCAGTCGTAGTCTGACCAATCTCTACGGTA GTACTTGCAGTGAAGTGTGGCAAGCATGTTTTGTGCTGTTTTCTTCAGAT GAATCTTCACTCTTGTGGTTTATTGTAGCGGTCGTGCGGATATGCTGAAC TCTCGCATGTCCGTATGTACCTCGGCCAGGGATTCGCTGAGATCGTCGGT CAGAAGGACACTGTCCAGGTGTACTCTGGACATCTAGGCGCTGCGGGTGT CGAGTTGTTGGGCGCCCAGCGTCAATGTGCTCCGCAGGTGTGTCCTGTAC CTCTTAGCTGAGGCTGATTGGCCCAGACGTCAAGAAGAACCACTTGCGGT GTCTTCATCAAATGCTCATACAGAACTCCTCGCTGCAACGTCGATGGGGG ATGCCGCTCCTCAATCTCGCAACATTCCTTGTCCACCACGACGAACAGGT GTATGAGGTTGGGCAGTCGGCAACAGACATGAGAGCGTACTCTTAGGTCC ACATGTGCGCTCGACCACACCAGTAATGACATTGAGCAACATAACAAACA AGCAGGTGTTTGTTGGCACTCATGGTGTAAGACGTCGTCATTCGACTCTG AGAGATGGATCATTCTTCCGCCGGGAGTTCTCCTGCACTGACCTACTGTA GTTTAACGTTTAGGAGTTTTAAGTTCTGAATTTGTGGGACATTGAAGGGC TTCCCAGTTTGCATCGTCGAATTTATTTCTGAACTAGGATTCGGAGGGTG CTGGAGATGGCGTACGGGTTAAGCGCCAAATAAACTGTTAATGTGAAGAC AACAAGAGCAGCACCATCATGCCTGAGCAGCAATCGTTGCTGCCATACCG TTGACGTTTCGTGCGACTTCGAGGGAACCTCAAGATGGCATGCATTTGGC ACATTGGCACAAGGCCTGCCTCATTGGAGATATGTCGACGAACATCACTC CGGCCTGGCAGGGAGTCTAGGGTTTATGGCAGTATTGTACTCTTGTGCAC AATACGAGATCTGCACCTTCACCCTCTTCTGCTGTTACCCACAACTCAGA TCAAGCCAGCTGTATGCGAAGGGGACATATATCGGTATGTTGCCCAGTCG CATACGGCGTTCGAGCTAGTTGCCTTCAAGAGAGCCTGCGAAAAGAGTGC GACAGGCGGACACTCAAGAGAAGACGAGCCTTGCGAAGAGAACAGTGGCG GTGCTATTCCGCACGGCAACGCCCCCCAAGCGGAAGAGGTGTCTGACGCT ATGGTGTCTGGGCTCAAAGATGGGCTGATCGACTTCGAACACCTACAAGA AACAGTCGATCGGTGAGCAAATTTCAACCCTGCTTGACGGCATGCTTTCA AATGCCGTGCGCCATCTCTGTATCCGTGATGACATAGAGCCCTTGTTTCT GCGACTCCTCTGTTGGTCGACCCTTATTTCTGCACATTTTGGTATGGCGC AGAGTTCTAGGATTCTTACACGCACCCTTGGTTCCCTCGCTCCTCGTGAC TGCCCTTCACCAACATGGTGAGCAGACCAAACATTCGCACGGGCATCGGC GGCCTCCTCATCAACATGTAAGTACTCCTGACAGCATGCGCCCAACTGTT AGAAACAGAGAAGAGTGTTCTGAGTTCTTTGCTTGCAATGGCTCACGCTC CGTTGACCCACGAGCAACACAACCTATTTGTACTGCCTACGAACAACTCT AGGTAGTGGAGAAGTTCTATTTCGTATTACTGTCGCATTCAATGATGACT CTGTCCAAATCTACATTGCCACGTGCCGTTTGTGACAGAACCCTGGCATT TCAAAAAGCAGCGAAAGGGGACGCTGGTGGGGCGCTGGAGAGGTTCGGGA ATTGCGTCGAGATATTCGAGCGGTACCCTGGCTTGTGTGGCTCCATGATG CAATGGTGAGCCGATCGCATGACGTCACCGAAGCTAGCGTTGATACTCAG GCTGGCTACGATCCGTGGTCGTGGCGGGTTATGGGACCAGCCTGGCCGTG AGTCTAGAGGACAAGAAGAGTACTACAGTACTATAATAATGCCAGTATCG GTTGTTCAATGTGATTTGTGTGGCTTTCCCCTGTGTAGGAGCTCGGCCAC TATTAGTGTCGGACTACCCATAGACAGTTCTGGCATTCGTGGTAAAGGCA TGTCAACGGTGTGTACTGAGATCGTATGAGATAAGACATTCGCAAATTCT CGCCTTGTGTTTCTGCCCCCCGCCGTACCTCCCACCATGTAAAGGTGTCG CCTTGCACAATATGTCCTGGGGGCCCTAGCAGCAATTGATGACTCTAGAG CTCGGGGGCTGCATACTCGGTTGCGGGAGGTCTACAACCCGTCTCGCCCC TCTTTCTCTCTGCCAGCGCCACCTCTGGAGGAGTGGGGTGGGATATCTGC ATTCTGCGGTGATTTCCGGTGCAGGTGCGTCGCGGGGTTGACTCTCTGCT ATGGTACATCCACTGGGGCTTGTGCAACTATTCATCAATACCAAGGCACA CTTCTGTCCGGGAAAACCGTGTCTGTCGGATTTCTCAAGAACAAACTGTC TAGTCTACAGGCGCAACACCACGTACGTAACTACCGCCCGGATTTCATCG TGCCGTCTGTGTGTTTCCACCACTCACTACCTCACCGTTGGTGCATGGTT TGACCCGCATTCCAAAAGTTATGACTACATGTACACGGTTCTCAAAAACT CATCCGCAGACTCCTATTGCCATACACTGCGGACTGGTGTTCTACACGAC AACGCAAACGCCCGGAGTGATGTGTCTGGACGTACGTGCGTTCTTCAAGT ACTTCACTTTTCCATTCACTTGGGAATCTCTGGAGAATACGGTGTAGAAT ACGCCGCGATGATTTCACAGCATCGGAGCATCGCGGGAGCCCTCTCGAGT CATTATTCAGGTCTCGCCTTCTTCACTTTTCACATGCATGCGCCTCCTCC GTGTACGTCACCACTTCGACACCTTCGACTATTTTCCGGCCTCCTCTGCC TCTAGGTCTTGCTTGTTTTTCATTTTTCATTCTTGAAGATGAAAATGCAC GAAGGGGCAAAGTTTGCCCCTTCGTCGAGTTTGGTGCGTGCTTCCTCCTG TGCATTTCTCTTGTTTCCGTTATATAATTTTGTCTCTATTGTGTTCACCT TCTGTGTCCACCACCAATTGGCTCGGTCCCTACGTTCTGTCGACCATGCA TTATGCATGTCGTTCAAGCTCAATTGCCGTTGGGACATACATTCTGCTTT AGGCGATCTTCCTCCTGCTTATTGAGTCGACCGTTTTGTCTTTACCATCT CTGGACCAGTCTGGGACCGTGAGGTTTGTGCTCTGTCGCGGTACTGTTCG GTTTACTTCATTTCTTTCCCCCTTTTTGCTTTTCGTTCGGACATGCCTCT GCATTGGTGCTTCCTGTCGTTTTTTCGGCTCTACCTGTTTCTCCTCCCTT TAACTTGTAGGCTAGGTATGTATTTCGCTGTTCATTGTGGAATCTACGCC GCCTTTTTCGCTGTTTGCTGTGGTTCGTGCGTACTGTTGGGTGCGCAGAG TGCCTACCACTCTTTCTCTATGAGGGTCGGGTTGTGCATATTCCTGTCGA CACTCTTCCCCCTACTGCCGTACACGTCTTGTGGCGGGACGACGCTTTTC CCTCCATTAGCAACTGGACATCTGCTCGCGGTTTCGACTACAATACTCCT ACCGTAAACGAACCACATTTTTTTGTGCGATTCCGATGGACCTTCTGCCT CTTTGTTGGGTGCTGCCGGCTACAGTGCCGCATTCATCCGGTTACTCCCT ACAAGACAGTAATTGATCCGCGCGGGGTATGTCCGCGCCAAGACGACGCT CTGTACGCTAAATGTGCATATCACGGGATTTCGGCCTTGTTTCGATTTCT TTTTGTGGATTGACGCGCTGTTGCAACTCGTCTGGCGATAAAATAACAAG CCGCGTTCGAAGTGCTGAAAATGCTGGGGTATCAAACATTCACTGCTGAG ACTACAACTATTGGCTGCGTGGCTCTCATGCGGATACTTTCGTTAATATG GCATGGCGCTGAAGGGCGCAGGTTTTGGCGCGGTCTTTCGTTTCCCTATC TATACCTATCTATACCTTTTTTTTCGTGCATGTATGCCGTATCGTATCGT CGACATTGAAACTACGTGATTCGACCGTTTCATCTTTGTCATATTACCTC CACATATACATCGACTCCGAGCAGACATCCCCCCGCGACGGGAGTCTGGC CGCCCGTCCCATTGCTCCTACGCTTTCTACAGTTTTCCCAACCGACCCAT GGGCAGCCCATATGGGCTGCCCATGAGGGTGCCCATGGGTAGCCCGTGGT GGGTAGTCCATGGGCAGAAATGAGAGCCCTTCAACCGAACCAGTGTACTC CGAAACAATAGATTATCTGCTTTGGAACGGGCACTCTAGCGGCGAAAGAA CCCTAACGCCAACCCTAACCCTAGCCACAAGCCCACACGATACATGCTAG GTTGGCGCTACTGGCTAAGTTCTAGGTTGATGTGAAGGTGACTAAGTTCT AGGTTCATATGCCGGTGGCGAAGTTCTTGGTTGAAGTGCCACGGCGGGAA CTTCATGGGCCGCCCATGGGTCACCCATGGGCGGCCCATGGGTGACTCAG GGGTTTCCCATGGGCGGTTTATCAAAAGTGCCAGTTGTGTGGGAAATTGC CCCAGTGGGGGGGCGGACAATCGTTCCCCGTAGTATGAATTGTCCATAGA GATTGCAAATGACTGGGTCGGGACGGTAGTATTGACTCGTTATTGGTAGG TAGAAATGGACGTTTTCTCGTCGCCCCCACCCCTTGCCCCTATTTGCGGG CCCCACTCAGCCCCTCCCTTGCTAAGGGGGCAACGGCTGCCGCAGCTTTC CACGCGAAGTTCCACCGGAGGTCAGAGCTCGGCGTATCTGCAGCAGACCA ACAACAAACTGATAGACAGAAGCCGAAAGACCACACACAATGGATTATTC GGGGAAGGGGTGCGGAGACCGTCGGGGAAGCCCGTAAAAATTTGAGTAGA GATCGGGAAGCGATTCCTTTAGTCAGGCTTTCGGTGCGAGGTTGTTGCGT TCTTAGGCGAACACGAGTTTCGACACATGTTTGTCCTTCTGGTGAATTGC CAAAGAGCAGCTCTATGGCATTACATGTCGGCTTTTTTACGCAAAGTACC CCAAAGTACACACACACTGCTAGGTGCCTACGCGGGCACGGAAGCCGCGG GAAGGTGTGTAACAAGGACATACACGCATAGTTGGTAGCTGAACTAATGG TATATGAACCTCGCGTACGATGTAAACACGCAAGACATGTACTACAGCAA CGACAACAACAACGTTGGCGTCTTCTGTGTGTAGGAACTTCCCACCGTGG TTTCAATCTACCCCATGGTGAGGTACAGACAAAAATGAGAGATTTACACG GGGAGAATATACATAGTTACATAGCAGAAGAGCATATGACGCGTACATCT TGATTTAGTGTGCTTTCAGCTTTTTTTTTGCCTCTTTTTTGTTGTTGCCC GTTCTAATCCAATACAAGATTTCGGCGCGTCAAAATCCACAAATAAATGT TGGGAACATTGGCACAACAGCCTTGTCGTGCGCATTTTACCACGCTTGTT CAACAAATGACAGTGGTGTACGACATCAACCTGCCTGCAGATAGATCTCA TCCTGCAGAAATATCATATCCGTACTACATCGTGCATCTGCACTACTGCG TATGTTACCTACAGCACAAACCGTCCTTCGCACGTATGAATACATACGTG TCTGTATACCACGCCAGTCAATCTTACCACACAAATATCGGTGTGTGTAC CAGCAAGCAGTAGTAGACATGCTCGCATACATACATGACGTGCGGTGTTC TGTAGTTGGCAGCAGCAACAGACGCGTATGTGTCTGTTAGCGGTAGGTTG CAACTAGCTCATGTTCTGAAACATGGCCGTACCATGGTCCGATCGTTACC GGCACATTAATTTACACGTACTACATTGGTTTCTTCTTCGTGTCTTTTTT TCATGCGCGTTTCCGATATTCCGCGTTCATTTCGGCTTCTCCTTTAGGCG TACGACATTTTCGTATATTCCAAGTGCGATGGTGCCGACATTCTATTTTC GGACGCCAAGGTATTTGTTGCGAATAAAATTACGCCAACGTAATTGTTCT GGATAAAACTACAACATGAAAACTACGACCTTCTCCGCTTAATTCGTGGC CGCCGTGTCCGTCTCGGCCAATGCACGGCCAATCACACAATGGCAAAGAT TTTGCTTCCAGGTGGCCGTGCCGCCTCATCGGCGGGCGGCCGCCTATACT GTTGTATTCTCGTCTCCGTTTTTGGATCACTTATAGAAAGTATTGGATTT GTTTGGATGAGGCCTCCTGTCCCGGCAGGAGGACCGCACCCCTCTGATAT GGTGCCGCGCTGATTGATTCGTTTCACTCAGCGCGGCATCACACTCAGAG AAGGAAAAGGATCCAGCGGTGGAGATACCACAGTGGAGATTACAATAGTT GGGCGGGTGGGATTGTCTCTGTTTTTGGTATATCTCTCCCCCTTTACGAC GCTTGTGGGGGGAAAACAGGGAATGATCAATAGTCATTTCTCAGTAGTTT GGGGGGCCTACAGCTGGGGTGGATCCGTGCCGGATCCGTTCCCCTTCTGA GGTCTCCCCGATATTACCCTAGTATTCCTACATTTCCCGATGAAACCAAG AAAAAAAGACACGCAGAGCAGGGCAGGGACCCCGCCCCAAATAGTCAAAC GAAGCACAGCCCGTCGGTCCACTCGGGAGCTGAGCCTCAAACAAATGACT GTAGGAGTATCCCTTTGTCCGCTCGGTGACGTTTTCGCTCAAACGCGGCG AGAATGGACTCGAGCGTTAACCGGCGACTTTGGTGTGGCGCTCCGTGTCC AAACCAACCCGTTCCACTACTGTGGATATGTATTGCAACCCTTGCCCGTG CTGGCTCCCACTTGTTCTTCAATACTTTCTCTGCAGGATATACGAGGGTG TCATCCAAGAATTGAGTGTTTTCTCCACCCCACCCCTCTGCGCTAGCAAC TGCGCCGGCTCACAAGGGGCTCAGTGCAAGGAAGAGAATCTGCCGGCCGC TGATAAGGAACATCGTAGTAGCATCGTGTCGGCGGATGTCACTCCCGAGG ATGCCACCAGCTCGATCATGGTTGCCTCTTGCAGCAATGCAGGCAAAGCA GTGGCATGTAGTAGCTCGTGGGAGTCGCACCAAGAGCCTGCGCCACAAAT AAGCCCACCGGTCGGCCCGAGCTTGTCTCCTTCGCATCTCCAATTCGAAT CTATCAAGGGAGGGACAAGTGATGATACTGACGTGTTCAGCGGTGTGGTC GAGGGATGTGGTGGTGGTGGTGGTGTCATTGCTGGCTTGATGCCCCAAGT GCATGATATGCCCTTGACATCGCCGGATTTGAGAGAGGTGGACGGGACCA AGCACGGGGATGATGCTATTGCTGCAGTAGACTGGCTGGAACTTTCTCAG GCCATGATGGATGCAGGTGACAAGAGTCCGGCGCTTCGATTTTGACTGCT ATCTTTTTCTTTTCGAACCTCTGATGCTAGTCGTATGCAGAGCTCTTGGA TGTTGGACGAAGTGTCAGTGACTGTTGTGTTTCCCATTGTTAATAGTCGG GCTACGACGGCTTTATTCCTGTTTATCGGCAGACTCAGTGTCGCTCATGC AGCCGAAGCAAGGGTGGTACACTGAGGCACAATGCCACCGGCTGTCTCTA CTCAAGTTTCACGTCATGCATACAGTTCGTCCTCGGGTACCCTCTCGTTT TTGGGAATACAAGACGATTACCACTTCCTGAGATGCTGCGGAACCCCCCT TTTCCAGCATATCTCTGCAGCCACTCGTTCGCGATTAAGCTTCTAAGAAC CTTGTCCGTACACGATGTAATGTGCTTGAGGTCGATTGGGGTTCTGTGGG TGGAGATCTGCCTGGTGGAGCAAATATGAAGTTTCTCCACCGGTGTAGCA AATGGCATGATTGCCGTTTTCTCGTTTTTTTCGTTTTAGCCCGAGTGAGT TCGATCATCTCCCGGTTAGGTCATTACTTTTTGCCCTTCAGCACGGGCCA GCAGATAATGAAAGTCAAAATCGATCCAAGCTCAGTTTCTTGTTTCGTCA CCACTCGACCACAGGTCATATAGAAGATTAGATTGCAGTGTAGGATAATG TTTTGGGATTTGAATGCGTAGGAAAGTACCAACGGTAGTGTGGGCTAATG CCCAGAGGAAAGTGCGGGAGATGCAACTCCCGATTGAAGGATAAAGCAGG GGACAGGGCCTTTGTACCCCCTGCCTGTTAGAGGGAGCTGGTCTGCCCCC GCATGCTCAGTCTACCACAGATGAATCGACAAGTGAGTCTTCACCAGGGT CTTCAGGGATTGCTACGCGTGTCTATACCATTACACTAGGCGTGTCGGCT TGTAAGAACACAGGTTTCTCTAGACTTTCTTTCGTGCCCTGTGCTTGCTT TGGCGCGAGAGCTATGCTCAGTTTTGCCTCGTCTCTTGCTGCTGATGACG AGCATCCGCGGTCTCGTCTGCTTTCCTTTCTGGTACGTCTCGCCGCGGCT ATGGTAGCCGGAAACGCTCTGGTTCCAGTGGCTCTGTGCCTACTGCACTG CTGTGTACTGCGCGCTCGATTGCCTCGCAGTCGTTGTTGTGCCGCGCGGA TCGCTGAGAGGTGTATGCTAGACCTATTTTCATATTTTTTGTGAAATTTT GGCCCTCTGTTTCTTAATGAACTGGGTAATTCGAAATACGGACCCACACT GGATGCTATTATCGCACTGGAAGAGTTTTTTCGGGGTCAATTTGTTTTGT TAAGGTGCACCCCTCTGTGGGTAGCTAGCTGGCTTGTGACCACGGAAGAA GGCTTCCACGTCAGTTGAACCAGTACTGGTGACAGAAAGTTCTGAGCGGA GGCGGACAATAAGAACTGCTGCAGACTACTGTAGTGTAGTAGAAGAAACA TGGCAGTGGTGTAGCATCATGGGCGGTCCCCGATAGCTCTGCCCTCC
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1018:1684..13880-

>mRNA_Ecto-sp8_S_contig1018.297.1 ID=mRNA_Ecto-sp8_S_contig1018.297.1|Name=mRNA_Ecto-sp8_S_contig1018.297.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1818bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1018:1684..13880- (Ectocarpus species8 EcLAC_412)
ATGCTACCTTTAAAGAGGTTCAGATTGAGCGCATCTCCGGCGACTGGTCT
GGTGGGCATGGAGGAGAACGCATTCCTCAATGACTTCTTCGGCTGCGTTG
GGTTCCTGCCCCTCACCACCCCAAGTGACATTCGTGGAGCGATGGTGAGG
ATGATGAGCCTCTCCACTGTCCAACAACAACTGGGCGCTCTGCGCGACTC
CCCCGATCAAGGCCAGTTCGGCACCATCTTCACCGAGGATGACATCACCA
CGGGAAATCAGCTCTTGACGGGCCCCTCGTGTTGCACATTTTGGTGTGCA
GTTGGTATTGGGGCTGTTGTGAAGGGAAGCCCTGTTGAATCGGTTGCGAA
CTACTCCCGACTGGCGAGAGATGCTCTGGACGCCTACATAGGCCCTGTGA
ATGCCGAGGTGGCAAAAGCGTGGGCGATCCTGGGATACTTCTACGGTTCC
ATGGGAGACATGGCGAATTATATGAAGTACCTGAAGCTTTCGGGCTCCTT
TTTGATTGATTCCATCGAGAAAGGGTCAACCGACATGCTGCCAGCGGGAT
TCGCTGAGATCGTCGGTCAGAAGGACACTGTCCAGGTGTACTCTGGACAT
CTAGGCGCTGCGGGTGTCGAGTTGTTGGGCGCCCAGCGTCAATGTGCTCC
GCAGATCAAGCCAGCTGTATGCGAAGGGGACATATATCGGTATGTTGCCC
AGTCGCATACGGCGTTCGAGCTAGTTGCCTTCAAGAGAGCCTGCGAAAAG
AGTGCGACAGGCGGACACTCAAGAGAAGACGAGCCTTGCGAAGAGAACAG
TGGCGGTGCTATTCCGCACGGCAACGCCCCCCAAGCGGAAGAGGTGTCTG
ACGCTATGGTGTCTGGGCTCAAAGATGGGCTGATCGACTTCGAACACCTA
CAAGAAACAGTCGATCGCAGACCAAACATTCGCACGGGCATCGGCGGCCT
CCTCATCAACATAACCCTGGCATTTCAAAAAGCAGCGAAAGGGGACGCTG
GTGGGGCGCTGGAGAGGTTCGGGAATTGCGTCGAGATATTCGAGCGGTAC
CCTGGCTTGTGTGGCTCCATGATGCAATGGTGTCGCCTTGCACAATATGT
CCTGGGGGCCCTAGCAGCAATTGATGACTCTAGAGCTCGGGGGCTGCATA
CTCGGTTGCGGGAGGTCTACAACCCGTCTCGCCCCTCTTTCTCTCTGCCA
GCGCCACCTCTGGAGGAGTGGGGTGGGATATCTGCATTCTGCGGTGATTT
CCGGTGCAGGATATACGAGGGTGTCATCCAAGAATTGAGTGTTTTCTCCA
CCCCACCCCTCTGCGCTAGCAACTGCGCCGGCTCACAAGGGGCTCAGTGC
AAGGAAGAGAATCTGCCGGCCGCTGATAAGGAACATCGTAGTAGCATCGT
GTCGGCGGATGTCACTCCCGAGGATGCCACCAGCTCGATCATGGTTGCCT
CTTGCAGCAATGCAGGCAAAGCAGTGGCATGTAGTAGCTCGTGGGAGTCG
CACCAAGAGCCTGCGCCACAAATAAGCCCACCGGTCGGCCCGAGCTTGTC
TCCTTCGCATCTCCAATTCGAATCTATCAAGGGAGGGACAAGTGATGATA
CTGACGTGTTCAGCGGTGTGGTCGAGGGATGTGGTGGTGGTGGTGGTGTC
ATTGCTGGCTTGATGCCCCAAGTGCATGATATGCCCTTGACATCGCCGGA
TTTGAGAGAGGTGGACGGGACCAAGCACGGGGATGATGCTATTGCTGCAG
TAGACTGGCTGGAACTTTCTCAGGCCATGATGGATGCAGGTGACAAGAGT
CCGGCGCTTCGATTTTGA
back to top