mRNA_Ecto-sp8_S_contig10179.296.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: D7FT24_ECTSI (Similar to ataxia telangiectasia and Rad3 related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT24_ECTSI) HSP 1 Score: 393 bits (1009), Expect = 5.770e-123 Identity = 207/208 (99.52%), Postives = 207/208 (99.52%), Query Frame = 1
Query: 1 ALRSLGWEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR 624
ALRSLGWEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVD GTISKSRGGTAIGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR
Sbjct: 1284 ALRSLGWEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDTGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR 1491
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: A0A6H5KWD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD2_9PHAE) HSP 1 Score: 347 bits (891), Expect = 3.900e-111 Identity = 191/208 (91.83%), Postives = 191/208 (91.83%), Query Frame = 1
Query: 1 ALRSLGWEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR 624
ALRSLGWEQRLSAMGASLRKLAPVLA ADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTV KGTISKSRGGT IGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR
Sbjct: 127 ALRSLGWEQRLSAMGASLRKLAPVLA---------------ADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTV-KGTISKSRGGTTIGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR 318
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: A0A4D9CU95_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU95_9STRA) HSP 1 Score: 137 bits (345), Expect = 1.020e-33 Identity = 81/203 (39.90%), Postives = 119/203 (58.62%), Query Frame = 1
Query: 19 WEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGDE-RLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR 624
W RLSAM S+R+ APV+A RR F++ +G +NW+ A++A+ AG+F +A +ALR A G+ + L EEAKL + VH AL++LEPV+ D+ +L+ +T R G + G++ + Q A +LLL T+W+V+AG KHGQ V+ RYKLAL+LRP E +F L +Y DFL ++R
Sbjct: 2826 WAGRLSAMMPSVRQCAPVMAARRTLFQMARFQGLMVENWVATAEQAQDAGRFRLAESALRHAACWGLGGETLLVEEAKLLHAQGKVHEALLLLEPVDVDLPTLRRRVT-----------------------DAVRHGTHLHGEDVKRQAATRLLLATDWMVQAGVKHGQQVLDRYKLALELRPKSEAAFFALAKYTDFLLEAR 3005
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: W7TMH7_9STRA (Serine threonine-protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMH7_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.040e-32 Identity = 79/203 (38.92%), Postives = 118/203 (58.13%), Query Frame = 1
Query: 19 WEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGDE-RLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR 624
W RLSAM S+R+ APV+A RR F++ +G +NW+ A++A+ AG+F +A +ALR A G+ + L EEAKL + VH AL++LEP + D+ +L+ +T R G + G++ + Q A +LLL T+W+V+AG KHGQ V+ RYKLAL+LRP E +F + +Y DFL ++R
Sbjct: 61 WAGRLSAMMPSVRQCAPVMAARRTLFQMARFQGLMVENWVATAEQAQDAGRFRLAESALRHAACWGLGGETLLVEEAKLLHAQGKVHEALLLLEPNDVDLPTLRRRVT-----------------------DAVRHGTHLQGEDVKRQAATRLLLATDWMVQAGVKHGQQVLDRYKLALELRPKSEAAFFAMAKYTDFLLEAR 240
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: A0A7R9UBQ3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBQ3_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 9.880e-16 Identity = 68/200 (34.00%), Postives = 99/200 (49.50%), Query Frame = 1
Query: 49 SLRKLAPVLALRRAAFELCSLEGPQADN----WLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEP----VETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR 624
SL AP+LALRRA +L G ++ L AK A F VA LR A +LG+ D L +EAK+ + V L+ LE V+T+ + L+ + G GG G ++ P L R + A+KLL +T W+ EAG KHG ++ R+ LA++++P W K YF L +Y D L ++R
Sbjct: 549 SLGIRAPLLALRRAILDLTGRHGQMLESARTSTLTQAKIACYQRNFRVAQQELRWARQLGLPADELHLKEAKVLHAQGKVFDGLMHLEGSGFGVQTEAEKLRLQYGLGAG---------EEGGNGKAADQKPSERLT-SAFRRKRAAKKLLYSTVWLTEAGLKHGNEILDRFDLAIEMQPSWPKAYFALARYYDLLLEAR 738
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: A0A7S3YJJ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJJ4_HETAK) HSP 1 Score: 74.7 bits (182), Expect = 2.620e-12 Identity = 53/131 (40.46%), Postives = 69/131 (52.67%), Query Frame = 1
Query: 232 LAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDIDGDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFLFKSR 624
L +EAKL R H+A+ +LEPV+ L A + V GT +G T +RLQ A++L+L T W+ E G KHG+ VVARY+LAL L WE+GYF L +Y DFLF R
Sbjct: 7 LRVQEAKLLWARGLAHQAVDLLEPVKISALELTAEI-VKNGT-------RHVGFTHT---------------DRLQFAKQLVLATSWMQEIGLKHGEEVVARYQLALSLVK-WERGYFELAKYYDFLFTRR 113
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: A0A0D9WU94_9ORYZ (Serine/threonine-protein kinase ATR n=2 Tax=Oryzinae TaxID=1648021 RepID=A0A0D9WU94_9ORYZ) HSP 1 Score: 72.8 bits (177), Expect = 2.540e-11 Identity = 59/200 (29.50%), Postives = 88/200 (44.00%), Query Frame = 1
Query: 19 WEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDID--GDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFL 612
WE RL SL P+LA RR + L + + WLQ A+ R AG + A A+ A G + E+AK A+ L+ + LL + + G T I + + S +LP + L + E +++ LLL T WI GQK + + Y +LRP WEKG+FC+ ++ D L
Sbjct: 1920 WENRLRCTQPSLWAREPLLAFRRMVYNLSHMNAQAGNCWLQYARLCRLAGHYETAHRAILEADASGAPNAHM--EKAKYLWNIRKSDSAIAELQ---------QTLLNMPADVL----GPTVISSLSSLSLALPNAPLSVTQASKENPDVSKTLLLYTRWIHYTGQKQSNDIKSLYSRVTELRPKWEKGFFCIAKFYDDL 2104
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: A0A0E0E6I3_9ORYZ (Non-specific serine/threonine protein kinase n=2 Tax=Oryza meridionalis TaxID=40149 RepID=A0A0E0E6I3_9ORYZ) HSP 1 Score: 71.2 bits (173), Expect = 8.530e-11 Identity = 58/200 (29.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query: 19 WEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDID--GDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFL 612
WE RL SL P+LA RR + L + + WLQ A+ R AG + A A+ A G + E+AK A+ L+ + LL + + G T + + + S +LP + L + E +++ LLL T WI GQK + + Y LRP WEKG+FC+ ++ D L
Sbjct: 1873 WENRLRCTQPSLWAREPLLAFRRMVYNLSHMNAQAGNCWLQYARLCRLAGHYETAHRAILEADASGAPNAHM--EKAKYLWNIRKSDSAIAELQ---------QTLLNMPADVL----GPTVLSSLSSLSLALPNAPLSVTQASKENPDVSKTLLLYTRWIHYTGQKQSNDIKSLYSRVADLRPKWEKGFFCIAKFYDDL 2057
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: A0A0E0Q2T2_ORYRU (Non-specific serine/threonine protein kinase n=1 Tax=Oryza rufipogon TaxID=4529 RepID=A0A0E0Q2T2_ORYRU) HSP 1 Score: 71.2 bits (173), Expect = 8.540e-11 Identity = 58/200 (29.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query: 19 WEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDID--GDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFL 612
WE RL SL P+LA RR + L + + WLQ A+ R AG + A A+ A G + E+AK A+ L+ + LL + + G T + + + S +LP + L + E +++ LLL T WI GQK + + Y LRP WEKG+FC+ ++ D L
Sbjct: 1843 WENRLRCTQPSLWAREPLLAFRRMVYNLSHMNAQAGNCWLQYARLCRLAGHYETAHRAILEADASGAPNAHM--EKAKYLWNIRKSDSAIAELQ---------QTLLNMPADVL----GPTVLSSLSSLSLALPNAPLSVTQASKENPDVSKTLLLYTRWIHYTGQKQSNDIKSLYSRVADLRPKWEKGFFCIAKFYDDL 2027
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Match: B8B2K1_ORYSI (Non-specific serine/threonine protein kinase n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=B8B2K1_ORYSI) HSP 1 Score: 71.2 bits (173), Expect = 8.540e-11 Identity = 58/200 (29.00%), Postives = 87/200 (43.50%), Query Frame = 1
Query: 19 WEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKRARAAGQFAVAGAALRRAGRLGVCQDRLAFEEAKLAREREGVHRALVILEPVETDVDSLKALLTVDKGTISKSRGGTAIGGVGTSSSSLPRSGLDID--GDERLQLARKLLLTTEWIVEAGQKHGQAVVARYKLALQLRPGWEKGYFCLGQYVDFL 612
WE RL SL P+LA RR + L + + WLQ A+ R AG + A A+ A G + E+AK A+ L+ + LL + + G T + + + S +LP + L + E +++ LLL T WI GQK + + Y LRP WEKG+FC+ ++ D L
Sbjct: 1878 WENRLRCTQPSLWAREPLLAFRRMVYNLSHMNAQAGNCWLQYARLCRLAGHYETAHRAILEADASGAPNAHM--EKAKYLWNIRKSDSAIAELQ---------QTLLNMPADVL----GPTVLSSLSSLSLALPNAPLSVTQASKENPDVSKTLLLYTRWIHYTGQKQSNDIKSLYSRVADLRPKWEKGFFCIAKFYDDL 2062 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10179.296.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10179.296.1 >prot_Ecto-sp8_S_contig10179.296.1 ID=prot_Ecto-sp8_S_contig10179.296.1|Name=mRNA_Ecto-sp8_S_contig10179.296.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=209bp ALRSLGWEQRLSAMGASLRKLAPVLALRRAAFELCSLEGPQADNWLQLAKback to top mRNA from alignment at Ecto-sp8_S_contig10179:2310..4604+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10179.296.1 ID=mRNA_Ecto-sp8_S_contig10179.296.1|Name=mRNA_Ecto-sp8_S_contig10179.296.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=2295bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10179:2310..4604+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10179:2310..4604+ >mRNA_Ecto-sp8_S_contig10179.296.1 ID=mRNA_Ecto-sp8_S_contig10179.296.1|Name=mRNA_Ecto-sp8_S_contig10179.296.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=627bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10179:2310..4604+ (Ectocarpus species8 EcLAC_412)back to top |