mRNA_Ecto-sp8_S_contig101739.288.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: A0A837WZ79_9GAMM (Omp85 domain-containing protein n=9 Tax=Marinobacteraceae TaxID=2887365 RepID=A0A837WZ79_9GAMM) HSP 1 Score: 316 bits (810), Expect = 4.470e-103 Identity = 158/208 (75.96%), Postives = 166/208 (79.81%), Query Frame = 1
Query: 1 DPNVLGSHWQAGLSYDKRSD-----------------------------GRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
DPN LGS G+S+ K +D GRGR AYLERPFYSELAEWRFGLSGEDD+REQSRYVGAEAIADYRQDRDFASVDVGWRLAERNG QLRLLAGFRYDAR FERLPDE NLDLLP+DRTLSYPW+GFDYREN FREMTNLTRLQRVEDVRDGF WRTELGYSSPG+GATEDRAVLN+DFRD
Sbjct: 188 DPNFLGSGKSVGISHKKDADRSEXXXXXXXXXXXXXXXXXXXXXXXXXDGRGRSAYLERPFYSELAEWRFGLSGEDDIREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGSQLRLLAGFRYDARAFERLPDETNLDLLPDDRTLSYPWVGFDYRENRFREMTNLTRLQRVEDVRDGFVWRTELGYSSPGLGATEDRAVLNMDFRD 395
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: A6EXC4_9GAMM (Omp85 domain-containing protein n=1 Tax=Marinobacter algicola DG893 TaxID=443152 RepID=A6EXC4_9GAMM) HSP 1 Score: 316 bits (809), Expect = 6.320e-103 Identity = 159/208 (76.44%), Postives = 166/208 (79.81%), Query Frame = 1
Query: 1 DPNVLGSHWQAGLSYDKRSD-----------------------------GRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
DPN LGS G+S+ K +D GRGR AYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYR +RDFASVDVGWRLAERNGRQLRLLAGFRYDAR FERLPDEPNLDLLP+DRTLSYPWIGFDYREN FREMTNLTRLQRVEDVRDGF W TELGYSSPG+GATEDRAVLN+DFRD
Sbjct: 188 DPNFLGSGKSVGISHKKDADRSEXXXXXXXXXXXXXXXXXXXXXXXXXDGRGRSAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRLERDFASVDVGWRLAERNGRQLRLLAGFRYDARAFERLPDEPNLDLLPDDRTLSYPWIGFDYRENRFREMTNLTRLQRVEDVRDGFVWSTELGYSSPGLGATEDRAVLNMDFRD 395
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: A0A2G1VJZ5_9GAMM (Omp85 domain-containing protein n=1 Tax=Marinobacter guineae TaxID=432303 RepID=A0A2G1VJZ5_9GAMM) HSP 1 Score: 309 bits (791), Expect = 2.380e-100 Identity = 143/179 (79.89%), Postives = 160/179 (89.39%), Query Frame = 1
Query: 1 DPNVLGSHWQAGLSYDKRSDGRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
DPNV GSHWQAG S D+RSDGRGR AYLERPFYSEL WRFGLSG DDVRE+SRYVGAEAIADYR+ +++ S+D GWRLAER+ RQLRLLAG+RYD+ +F+RLP+EP LDLLPEDR LSYPWIGFDYR+N FREMTNLTRLQRVEDVRDGF WRTELGYS G+GATEDR VLN+DF+D
Sbjct: 206 DPNVFGSHWQAGFSLDERSDGRGRSAYLERPFYSELTNWRFGLSGVDDVREESRYVGAEAIADYRRSQEYFSIDGGWRLAERDDRQLRLLAGYRYDSLDFDRLPNEPALDLLPEDRALSYPWIGFDYRQNRFREMTNLTRLQRVEDVRDGFVWRTELGYSGTGLGATEDRVVLNMDFQD 384
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: A0A7Y0RDW4_9GAMM (BamA/TamA family outer membrane protein n=1 Tax=Marinobacter orientalis TaxID=1928859 RepID=A0A7Y0RDW4_9GAMM) HSP 1 Score: 300 bits (769), Expect = 5.630e-97 Identity = 139/172 (80.81%), Postives = 153/172 (88.95%), Query Frame = 1
Query: 22 HWQAGLSYDKRSDGRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
HWQ G S D+RSDGRGR AYLERPFYSE +WRFGLSG DDVRE+SR+V AEAIADYR+ ++F S+DVGWRL ERN RQ+RLLAG+RYDA EF RLPDEP+LDLLPEDRTLSYPWIGFDYREN FREM NLTRLQRVEDVRDGF WRTE+GYSSPG+GATEDR VLN+DF D
Sbjct: 219 HWQTGFSLDERSDGRGRSAYLERPFYSERTDWRFGLSGVDDVREESRFVAAEAIADYRRSQEFVSIDVGWRLTERNDRQVRLLAGYRYDALEFGRLPDEPDLDLLPEDRTLSYPWIGFDYRENRFREMVNLTRLQRVEDVRDGFVWRTEVGYSSPGLGATEDRFVLNMDFED 390
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: A0A2V3ZVW8_9GAMM (Omp85 domain-containing protein n=1 Tax=Marinobacter vulgaris TaxID=1928331 RepID=A0A2V3ZVW8_9GAMM) HSP 1 Score: 298 bits (762), Expect = 6.160e-96 Identity = 148/208 (71.15%), Postives = 161/208 (77.40%), Query Frame = 1
Query: 1 DPNVLGSHWQAGLSY-----------------------------DKRSDGRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
DPN LGS G+SY D+RSDGRGR AYLERPF+SE A+WRFGLSG DDVRE+SR+V AEAIADYR+ ++FAS+D GWRLAERN RQLRLLAGFRYDA EFERLPDEP LDLLP+DRTLSYPWIGFDYREN FREMTNLTRLQRVEDVRDGF WRTELGYSSPG+GATEDR VLN+DF D
Sbjct: 182 DPNFLGSGKSLGISYTRDPDRTETSLDXXXXXXXXXXXXXXXXFDERSDGRGRSAYLERPFFSERAQWRFGLSGVDDVREESRFVAAEAIADYRRSQEFASIDAGWRLAERNDRQLRLLAGFRYDALEFERLPDEPALDLLPDDRTLSYPWIGFDYRENRFREMTNLTRLQRVEDVRDGFVWRTELGYSSPGLGATEDRVVLNMDFED 389
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: UPI001246E0FB (BamA/TamA family outer membrane protein n=1 Tax=Marinobacter TaxID=2742 RepID=UPI001246E0FB) HSP 1 Score: 289 bits (740), Expect = 1.260e-92 Identity = 142/208 (68.27%), Postives = 161/208 (77.40%), Query Frame = 1
Query: 1 DPNVLGSHWQAGLSYDK-----------------------------RSDGRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
DPN LGS G++Y K RSDGRGR AYLERPFYSE A+WRFGL+GEDDVRE+SR+VGAEAIADYR+ ++F S+DVGWRLAER+ RQ RLLAG+RYDA EFERLPDEP LDLLPE+RTLSYPW+GFDYREN FREMTNLT+LQRVEDVRDG WRTELGYSSPG+GATEDR VLN++F+D
Sbjct: 183 DPNFLGSGKSVGVAYTKDPDRTETSINXXXXXXXXXXXXXXXXXXXRSDGRGRSAYLERPFYSERADWRFGLNGEDDVREESRFVGAEAIADYRRSQEFMSIDVGWRLAERDERQWRLLAGYRYDALEFERLPDEPELDLLPENRTLSYPWVGFDYRENRFREMTNLTQLQRVEDVRDGIVWRTELGYSSPGLGATEDRVVLNMEFQD 390
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: UPI001D1952A4 (hypothetical protein n=1 Tax=Marinobacter salsuginis TaxID=418719 RepID=UPI001D1952A4) HSP 1 Score: 287 bits (734), Expect = 2.330e-92 Identity = 134/166 (80.72%), Postives = 150/166 (90.36%), Query Frame = 1
Query: 40 SYDKRSDGRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
S+D+RSDGRGR AYLERPF+SE WRFGLSG DDVRE+SRYVGAEAIADYR++ +F S+D GWRLAE++ RQLRLLAG+RYDA F+RLPDEPNLD+LPEDRTLSYPWIGFDYR+N FREMTNLTRLQRVEDVRDGF WRTELGYS G+GATEDR VLN+DFRD
Sbjct: 218 SFDERSDGRGRGAYLERPFFSETTNWRFGLSGIDDVREESRYVGAEAIADYRRNHEFFSIDGGWRLAEKDDRQLRLLAGYRYDALVFDRLPDEPNLDILPEDRTLSYPWIGFDYRQNRFREMTNLTRLQRVEDVRDGFVWRTELGYSGSGLGATEDRVVLNMDFRD 383
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: A0A4U6R6I1_9GAMM (Omp85 domain-containing protein n=1 Tax=Marinobacter sp. PJ-16 TaxID=2576384 RepID=A0A4U6R6I1_9GAMM) HSP 1 Score: 287 bits (735), Expect = 5.900e-92 Identity = 143/208 (68.75%), Postives = 157/208 (75.48%), Query Frame = 1
Query: 1 DPNVLGSHWQAGLSYD-----------------------------KRSDGRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
DPN LGS G+SY KRSDGRGR YLERPF+S+ +WRFGLSG DDVR++SR+VGAEAIADYR+ ++F SVDVGWRLAERN RQ RLLAG+RYDA FERLPDEP+LDLLPEDRTLSYPWIGFDYREN FREMTNLTRLQRVEDVRDGF W TELGYSSPG+GATEDR VLNI+F D
Sbjct: 176 DPNFLGSGKSVGISYTRDPDRTETGINYXXXXXXXXXXXXXXXXXKRSDGRGRSVYLERPFFSQRTDWRFGLSGVDDVRDESRFVGAEAIADYRRSQEFVSVDVGWRLAERNDRQWRLLAGWRYDALNFERLPDEPDLDLLPEDRTLSYPWIGFDYRENRFREMTNLTRLQRVEDVRDGFVWLTELGYSSPGLGATEDRVVLNIEFED 383
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: A0A0P7WIG6_9GAMM (OmpIP family porin n=1 Tax=Marinobacter sp. HL-58 TaxID=1479237 RepID=A0A0P7WIG6_9GAMM) HSP 1 Score: 285 bits (730), Expect = 5.240e-91 Identity = 140/208 (67.31%), Postives = 157/208 (75.48%), Query Frame = 1
Query: 1 DPNVLGSHWQAGLSY-----------------------------DKRSDGRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
DPN LGS AG+S+ D+RSDGRGR Y+ERPF+SE +WRFGL GEDDVREQSR+VGAEAIADYR+ R+F +D GW LAER+ RQ RLLAG+RYDA+ FERLPDEP LD LPEDRTLSYPWIGFDYREN FREMTNLT+LQRVEDVRDGF WRTELGYSSPG+GATEDR VLN+DF+D
Sbjct: 194 DPNFLGSGKSAGVSWTKDPDRTETSLYFXXXXXXXXXXXXXXXXDERSDGRGRGGYIERPFFSERTDWRFGLRGEDDVREQSRFVGAEAIADYRRSREFVDIDAGWALAERDDRQWRLLAGYRYDAQAFERLPDEPELDALPEDRTLSYPWIGFDYRENRFREMTNLTQLQRVEDVRDGFVWRTELGYSSPGLGATEDRVVLNMDFQD 401
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Match: E4PKN9_MARAH (Omp85 domain-containing protein n=31 Tax=Bacteria TaxID=2 RepID=E4PKN9_MARAH) HSP 1 Score: 283 bits (725), Expect = 1.910e-90 Identity = 131/170 (77.06%), Postives = 152/170 (89.41%), Query Frame = 1
Query: 28 QAGLSYDKRSDGRGRIAYLERPFYSELAEWRFGLSGEDDVREQSRYVGAEAIADYRQDRDFASVDVGWRLAERNGRQLRLLAGFRYDAREFERLPDEPNLDLLPEDRTLSYPWIGFDYRENYFREMTNLTRLQRVEDVRDGFEWRTELGYSSPGMGATEDRAVLNIDFRD 537
QAG S+D+RSDGRGR AYLERPF+SE WRFGLSG DDVRE+SRYVGAEAIADYR+ ++F S+D GWRLAER+ RQLRLLAG+RY+A F+RLP++P+LD+ P+DRTLSYPWIGFDYR+N FREMTNLTRLQRVEDVRDGF WRTELGYS G+GATEDR VLN+DF+D
Sbjct: 215 QAGFSFDERSDGRGRGAYLERPFFSETTNWRFGLSGIDDVREESRYVGAEAIADYRRSQEFFSIDGGWRLAERDSRQLRLLAGYRYNALMFDRLPNQPDLDIFPDDRTLSYPWIGFDYRQNRFREMTNLTRLQRVEDVRDGFVWRTELGYSGSGLGATEDRVVLNMDFQD 384 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig101739.288.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig101739.288.1 >prot_Ecto-sp8_S_contig101739.288.1 ID=prot_Ecto-sp8_S_contig101739.288.1|Name=mRNA_Ecto-sp8_S_contig101739.288.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=179bp DPNVLGSHWQAGLSYDKRSDGRGRIAYLERPFYSELAEWRFGLSGEDDVRback to top mRNA from alignment at Ecto-sp8_S_contig101739:1..537- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig101739.288.1 ID=mRNA_Ecto-sp8_S_contig101739.288.1|Name=mRNA_Ecto-sp8_S_contig101739.288.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=537bp|location=Sequence derived from alignment at Ecto-sp8_S_contig101739:1..537- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig101739:1..537- >mRNA_Ecto-sp8_S_contig101739.288.1 ID=mRNA_Ecto-sp8_S_contig101739.288.1|Name=mRNA_Ecto-sp8_S_contig101739.288.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=537bp|location=Sequence derived from alignment at Ecto-sp8_S_contig101739:1..537- (Ectocarpus species8 EcLAC_412)back to top |