mRNA_Ecto-sp8_S_contig1017.283.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig1017.283.1
Unique NamemRNA_Ecto-sp8_S_contig1017.283.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
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BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 550 bits (1416), Expect = 3.800e-176
Identity = 311/389 (79.95%), Postives = 322/389 (82.78%), Query Frame = 1 
Query:  361 NLESAVLSDTQRTFSLQFSSTCFCTEVGWSGADVALCGYDIVSGEFDKGCAIERVLDEDTRTTFGNQSTCDWSEDSLTAVITYDDAYADSWEAGVNITLASGYILGGIPLVSDGVIEYATGTVSLQGRTAPPELLQAMFSNDGESIIVAFSPESSASSGLLNATDTASGSGPGPCEALLNTSSIATIGERAACEWTGERALTIALGYGAIVEADTGSGVSCLRQASCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAASGANTSSIEASLALFEGSLVAELDAAALEPGVEFMFALTVGNFLGDTNGANVAVTRVAQDVPSVAVLGSATRVVKRSRPTSLRITATSP 1527
            NLESAVLSDTQRTFSLQFSS CFCTEVGWSGA+VALCGYDIVSGE+DKG                                                     YILGGIP VSDGVIEYATGTVSL+ RTAPPELLQAMFSNDGESIIVAFSPESSASSGLLNATDTASGSGPG C+ALLN SSIATIGE AACEWTGER LTIA+GY AIV+ DTGSGVSCL QASCISLLDGGVRTEALAVLSSEGSTPVL PENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAAS ANTSSIEA+LALFEGSLVAELDAAALEPGV+FMFALTVGNFLGDTNG  VAVTR+A+D+PSVAVLGSATRVVKRSRPTSLRITATSP
Sbjct:  209 NLESAVLSDTQRTFSLQFSSRCFCTEVGWSGANVALCGYDIVSGEYDKG-----------------------------------------------------YILGGIPSVSDGVIEYATGTVSLEARTAPPELLQAMFSNDGESIIVAFSPESSASSGLLNATDTASGSGPGSCKALLNASSIATIGEGAACEWTGERELTIAIGYDAIVKPDTGSGVSCLSQASCISLLDGGVRTEALAVLSSEGSTPVLVPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAASVANTSSIEAALALFEGSLVAELDAAALEPGVKFMFALTVGNFLGDTNGVTVAVTRIAEDIPSVAVLGSATRVVKRSRPTSLRITATSP 544
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BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Match: D7FLQ1_ECTSI (REJ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ1_ECTSI)

HSP 1 Score: 420 bits (1079), Expect = 4.960e-138
Identity = 235/252 (93.25%), Postives = 241/252 (95.63%), Query Frame = 1 
Query:  772 MFSNDGESIIVAFSPESSASSGLLNATDTASGSGPGPCEALLNTSSIATIGERAACEWTGERALTIALGYGAIVEADTGSGVSCLRQASCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAASGANTSSIEASLALFEGSLVAELDAAALEPGVEFMFALTVGNFLGDTNGANVAVTRVAQDVPSVAVLGSATRVVKRSRPTSLRITATSP 1527
            MFSNDGE IIVAFSPESSASSGLLNATDTASGSGPG C+ALLN SSIATIGE AACEWTGER LTIALGY AIV+ DTGSGVSCL QASCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAAS ANTSSIEA+LALFEGSLVAELDAAALEPGV+FMFALTVGNFLGDTNG  VAVTR+A+DVPSVAVLGSATRVVKRSRPTSLRITATSP
Sbjct:    1 MFSNDGELIIVAFSPESSASSGLLNATDTASGSGPGSCKALLNASSIATIGEGAACEWTGERELTIALGYDAIVKPDTGSGVSCLSQASCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAASFANTSSIEAALALFEGSLVAELDAAALEPGVKFMFALTVGNFLGDTNGVTVAVTRIAEDVPSVAVLGSATRVVKRSRPTSLRITATSP 252
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BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Match: D7G398_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G398_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 4.240e-90
Identity = 195/407 (47.91%), Postives = 256/407 (62.90%), Query Frame = 1 
Query:  358 PNLESAVLSDTQRTFSLQFSSTCFCTEVGWSGADV----ALCGYDIVSGEFDKGCAIERVLDEDTRTTFGNQST-CDWSEDSLTAVITYDDAYADSWEAGVNITLASGYILG--GIPLVSDGVIEYATGTVSLQGRTAPPELLQAMFSNDGESIIVAFSPESSASSGLLNATDTASGSGPGPCEALLNTSSIATIGERAACEWTGERALTIALGYGAIVEADTGSGV-------SCLRQASCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVS---AASGANTSSIEASLALFEGSLVAELDAAALEPGVEFMFALTVGNFLGDTNGANVAVTRVAQDVPSVAVLGSATRVVKRSRPTSLRITATSP 1527
            P L  A LS T+  F + F+ TC+CT  G   +++    ALCG D  +  FD+ C ++ +LDE TR  FG  +T C WS  S  AV+ ++++    W+   NITLA GYI G   + L  +  + +A+GTV+L  R A PEL +A F++DG SI+V+FS   SASSGL++  DT SGS  G C+AL  ++++  IG  A CEWT  R LT+ LG  A V A++           SC    SCI L DGGVR EA AVLSSEGS PVL P+NP  VSAVLVAPQ VGLCG  +LDGR SSGA SR+++A WNVS   A+  A  +++  +L  F+GSL A +++ +LEP VEF  +L V NFLG  + A V VTRV +D PSV V+G A +   RSRPTSLR+ AT P
Sbjct:  156 PELTYAELSGTESLFVISFNRTCYCT-AGDGASELSFPPALCGQDFETAVFDQRCNVKSLLDESTREFFGENTTICQWSNGSREAVVRFNESSVVVWDPAPNITLAGGYIYGQQNLSLYEEPAV-FASGTVTLGLRQAAPELSEATFTSDGSSIVVSFSATGSASSGLVDPNDTESGSA-GACDALFRSTTLLAIGHGAICEWTSHRELTVFLGSDASVVAESSDATTTMVSTSSCTTDESCIVLKDGGVRAEAFAVLSSEGSVPVLPPDNPSTVSAVLVAPQWVGLCGEFSLDGRMSSGAASRSLAAVWNVSTTLASDSAAVTAVAGALKPFQGSLYATVNSTSLEPLVEFKISLIVENFLGSVDAAAVTVTRVNEDAPSVVVVGPAAKTAIRSRPTSLRMAATPP 559
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BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Match: A0A6H5JQT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT8_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.380e-42
Identity = 130/373 (34.85%), Postives = 172/373 (46.11%), Query Frame = 1 
Query:  358 PNLESAVLSDTQRTFSLQFSSTCFCTEVGWSGADV----ALCGYDIVSGEFDKGCAIERVLDEDTRTTFGNQST-CDWSEDSLTAVITYDDAYADSWEAGVNITLASGYILGGIPLVSDGVIEYATGTVSLQGRTAPPELLQAMFSNDGESIIVAFSPESSASSGLLNATDTASGSGPGPCEALLNTSSIATIGERAACEWTGERALTIALGYGAIVEADTGSGVSCLRQA-------SCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVS---AASGANTSSIEASLALFEGSLVAELDAAALEPGVEFMFALTVGNFLGDTNGANVAVTRV 1431
            P L SA LS T+  F + F+ TC+CT  G   +++    ALCG D  +  FD+ C +  +LDE TR  FG  +T C WS  S  AV++++++    W+   NITLA G                       + R +                                                                   +R LT+ LG  A V A++                 SCI L DGGVR EA A+LSSEGS PVL P+NP    AVLVAPQ VGLCG  +LDGR SSGA SR++SA WNVS   A+  A  +++  +L  F+GSL A +++ +LEP VEF  +L V NFLG  + A V VTRV
Sbjct:   36 PGLTSAELSGTESLFVISFNRTCYCT-AGAGASELSFPPALCGQDFETAAFDQRCNVTSLLDESTREFFGESTTTCQWSNGSKEAVVSFNESSVVMWDPAPNITLAGG-----------------------RHRNS-------------------------------------------------------------------QRELTVLLGSDASVVAESXXXXXXXXXXXXXXXXESCIVLKDGGVRAEAFAILSSEGSVPVLPPDNPTKALAVLVAPQWVGLCGEFSLDGRMSSGAASRSLSAVWNVSTTLASDSAAVAAVAGALEPFQGSLYATVNSTSLEPLVEFEVSLIVENFLGSVDAAAVTVTRV 317
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BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Match: D7G3A1_ECTSI (GPS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A1_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 9.430e-42
Identity = 102/173 (58.96%), Postives = 122/173 (70.52%), Query Frame = 1 
Query: 1018 SCLRQASCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAASGANTSSIEA---SLALFEGSLVAELDAAALEPGVEFMFALTVGNFLGDTNGANVAVTRVAQDVPSVAVLGSATRVVKRSRPTSLRITATSP 1527
            SC    SCI L DGGVR EA AVLSS+GS PVL P+NP  VSAVLVAPQ VGLCG  +LDGR SSGA SR +SA WNVS    +N++++ A   +L  F+GSL A L++ +LEP VEF  +L V NFLG  + A V VTRV +D PSV V+G AT+   RSRPTSLR+ AT P
Sbjct:    6 SCTTDESCIVLKDGGVRAEAFAVLSSKGSVPVLPPDNPSTVSAVLVAPQWVGLCGEFSLDGRLSSGAASRPLSAVWNVSTTIASNSAAVAAVAGALQPFQGSLYATLNSTSLEPLVEFKISLIVENFLGAVDAAAVTVTRVNEDAPSVVVVGPATKTAIRSRPTSLRMAATPP 178
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BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Match: D7G3A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A0_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 3.500e-41
Identity = 101/173 (58.38%), Postives = 125/173 (72.25%), Query Frame = 1 
Query: 1018 SCLRQASCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAASGANTSSIEA---SLALFEGSLVAELDAAALEPGVEFMFALTVGNFLGDTNGANVAVTRVAQDVPSVAVLGSATRVVKRSRPTSLRITATSP 1527
            SC    SCI L DGGVR EA AVLSSEGS PV +P+NP  VSAVLVAP++VGLCG  +LDGR SSGA SR++SA WNVS  + +N++++ A   +L  F+GSL A L++ +LEP VEF  +L V NFLG  + A V VTRV +DVPSV V+G AT+   RSR TSLR+ AT P
Sbjct:    6 SCTTDESCIVLKDGGVRAEAFAVLSSEGSVPVFSPDNPTTVSAVLVAPESVGLCGEFSLDGRLSSGAASRSLSAVWNVSTTTASNSAAVVAVAGALEPFQGSLHATLNSTSLEPLVEFEISLIVENFLGSFDTAAVTVTRVNEDVPSVVVVGPATKTAIRSRVTSLRMAATPP 178
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BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Match: A0A7S0D3V0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D3V0_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 2.220e-9
Identity = 83/294 (28.23%), Postives = 124/294 (42.18%), Query Frame = 1 
Query:  700 GVIEYATGTVSLQGRTAPPELLQAMFSNDGESIIVAFSPESSASSGLLNATDTASGSGPGPCEALLNTSSIATIGERAACEWTGERALTIALGYGAIVEADTG----SGVSCLRQASCISLLDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWNVSAAS-GANTSSIEASLALFEG------SLVAELDAA-----ALEPGVEFMFA---LTVGNFLGDTNGANVAVTRVAQD-VPSVAVLGSATRVVKRSRPTSLRITAT 1521
            G +  + GT S       P+++     + G  + V+FS +S+ +S  + ++DT+       C+ +L T +IA +G   AC W     L +  G  A +          GV       C   LD G             ST +LAP +P  V+A+++AP T G C  L L+   S G+  R  S +W + + S    T +   +LA  EG      S V ELD A     A       +F    L V N+LG T+     VT +    VP V + G   R V+ S  T +  T T
Sbjct:  643 GPVTNSPGTTSPTTMCFAPQVVSGRVHDSGGGMAVSFSADSNKAS--MTSSDTS-------CDQILQTDTIAKLGNNPACTWKSSMFLEVVFGSAATISVGDNVQIKPGVLSRSFPDCTETLDAG-------------STTLLAPVSPTGVAAIIMAPSTFGSCSILDLEASYSIGSAGRIFSFAWTLQSLSPNPGTLASSTALARVEGYCAGSTSSVLELDGAFEDIQAASGAASTIFLTVQLRVTNWLGSTDTTTKEVTLLTNSQVPHVVIDGLPNREVRASSQTIISTTYT 914
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BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Match: A0A7S4DAU1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAU1_HETAK)

HSP 1 Score: 68.6 bits (166), Expect = 1.670e-8
Identity = 70/208 (33.65%), Postives = 96/208 (46.15%), Query Frame = 1 
Query:  697 DGVIEYATGTVSLQGR-TAPPELLQAMFSNDGESIIVAFSPESSASSGLLNATDTASGSGPGPCEALLNTSSIATIGERAACEWTGERALTIALGYGAIVEADTGSGVSCLRQASCISLLDGGVRTE-ALAVLSSEGST-PVLAPENPPAVSAVLVAPQTVGLCGTLTLDGRASSGALSRTMSASWN-VSAASGANTSSIEASLALFE 1308
            DG+     G V   G  T PPE+  A+F N GE   V F            AT+ A  +G   C  +L  SS   +G  + C W+    L I  G    V                I L D  ++T+   A L S G    +L+PENP A SA + AP+ VGLC  LTLDG  SSG+  R ++ +W  V+ ++ AN S++  + AL E
Sbjct:  534 DGLATSVLGMVIATGDPTPPPEISYAIFKNTGEGAYVYFD----------RATNQADLTGTFACTKIL--SSTGPLGTNSKCSWSSTTTLLITFGTDPTV-----------LPGDFIYLRDNLLQTDYEFATLYSSGQVGTLLSPENPVAASAEVSAPEMVGLCSDLTLDGSLSSGSGGRDLTYNWTFVATSANANVSTVNITAALAE 718
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BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Match: A0A6H5JHJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHJ2_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 3.680e-7
Identity = 31/32 (96.88%), Postives = 32/32 (100.00%), Query Frame = 1 
Query: 1432 AQDVPSVAVLGSATRVVKRSRPTSLRITATSP 1527
            AQDVPSVAVLGSATRVVKRSRPTSLR+TATSP
Sbjct:    5 AQDVPSVAVLGSATRVVKRSRPTSLRVTATSP 36
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1017.283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7G4X3_ECTSI3.800e-17679.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLQ1_ECTSI4.960e-13893.25REJ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G398_ECTSI4.240e-9047.91GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQT8_9PHAE1.380e-4234.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3A1_ECTSI9.430e-4258.96GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3A0_ECTSI3.500e-4158.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0D3V0_9EUKA2.220e-928.23Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A7S4DAU1_HETAK1.670e-833.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5JHJ2_9PHAE3.680e-796.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1017contigEcto-sp8_S_contig1017:1..4813 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score557.4
Seed ortholog evalue7e-156
Seed eggNOG ortholog2880.D7G4X3
Model size1528
Hectar predicted targeting categoryother localisation
Exons9
EggNOG free text desc.detection of mechanical stimulus
EggNOG OGsKOG3599@1,KOG3599@2759
Cds size1527
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1017.283.1prot_Ecto-sp8_S_contig1017.283.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig1017 1..4813 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143114.9674895-CDS-Ecto-sp8_S_contig1017:0..971681143114.9674895-CDS-Ecto-sp8_S_contig1017:0..97Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1017 1..97 -
1681143114.978316-CDS-Ecto-sp8_S_contig1017:544..8101681143114.978316-CDS-Ecto-sp8_S_contig1017:544..810Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1017 545..810 -
1681143114.9875524-CDS-Ecto-sp8_S_contig1017:1482..17091681143114.9875524-CDS-Ecto-sp8_S_contig1017:1482..1709Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1017 1483..1709 -
1681143114.9959998-CDS-Ecto-sp8_S_contig1017:2030..21991681143114.9959998-CDS-Ecto-sp8_S_contig1017:2030..2199Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1017 2031..2199 -
1681143115.005715-CDS-Ecto-sp8_S_contig1017:2400..25031681143115.005715-CDS-Ecto-sp8_S_contig1017:2400..2503Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1017 2401..2503 -
1681143115.01671-CDS-Ecto-sp8_S_contig1017:2924..30831681143115.01671-CDS-Ecto-sp8_S_contig1017:2924..3083Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1017 2925..3083 -
1681143115.0239084-CDS-Ecto-sp8_S_contig1017:3541..39141681143115.0239084-CDS-Ecto-sp8_S_contig1017:3541..3914Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1017 3542..3914 -
1681143115.0310466-CDS-Ecto-sp8_S_contig1017:4657..47201681143115.0310466-CDS-Ecto-sp8_S_contig1017:4657..4720Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1017 4658..4720 -
1681143115.0383797-CDS-Ecto-sp8_S_contig1017:4743..48131681143115.0383797-CDS-Ecto-sp8_S_contig1017:4743..4813Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1017 4744..4813 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig1017.283.1

>prot_Ecto-sp8_S_contig1017.283.1 ID=prot_Ecto-sp8_S_contig1017.283.1|Name=mRNA_Ecto-sp8_S_contig1017.283.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=509bp
PTSLPTTPFPSPSPTKSLTSAPIETPRTRGKPSNPRRRSNLRSCDGPLLA
PCCSICGHEGSPRPTPGPSPAPSTRPPTLAPSPTSGGGTPRPTAGPTLAP
TTSAPLPTSGPTVAVLLPAPNLESAVLSDTQRTFSLQFSSTCFCTEVGWS
GADVALCGYDIVSGEFDKGCAIERVLDEDTRTTFGNQSTCDWSEDSLTAV
ITYDDAYADSWEAGVNITLASGYILGGIPLVSDGVIEYATGTVSLQGRTA
PPELLQAMFSNDGESIIVAFSPESSASSGLLNATDTASGSGPGPCEALLN
TSSIATIGERAACEWTGERALTIALGYGAIVEADTGSGVSCLRQASCISL
LDGGVRTEALAVLSSEGSTPVLAPENPPAVSAVLVAPQTVGLCGTLTLDG
RASSGALSRTMSASWNVSAASGANTSSIEASLALFEGSLVAELDAAALEP
GVEFMFALTVGNFLGDTNGANVAVTRVAQDVPSVAVLGSATRVVKRSRPT
SLRITATSP
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mRNA from alignment at Ecto-sp8_S_contig1017:1..4813-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig1017.283.1 ID=mRNA_Ecto-sp8_S_contig1017.283.1|Name=mRNA_Ecto-sp8_S_contig1017.283.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4813bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1017:1..4813- (Ectocarpus species8 EcLAC_412)
CCGACATCGCTCCCGACGACACCATTTCCTTCACCGTCACCCACTAAGAG
CCTCACTTCGGCACCCATTGGTAAGTTGGTTTCGGGCACGTAGAGACACC
ACGGACACGTGGGAAACCATCTAACCCCAGGAGACGCTCGAACCTACGCA
GTTGCGGTGTACTGTGTGTCGTTCTGTGAAGGTATCAGCGCTTGTTCCAC
CTAAAAGGCAGAGCCGGGTTTTTCAGGCTAACCTGTAGATACCTGCAGCT
GAGATCGTTTTTCGCGGTTTGCCTTTTGGTTTTTATGTTTCGTGAATTCC
AAAATCGTCGTTATGCGCTTGATTTTCATTGAGGGTTCGATATTGGTTTG
CTACACGATTTTGCGGTTCGTCGTTAATATCAACCGGTTTGATAGTTGAC
AATTTGTTTTCGGGCCGTCGGCGCCTCGATATTTCATTATTCGTTCGGCC
ACCGACGGACAACTTGCGTGACTGGCGCAGTTTCCGCCCGGAAACGCCAA
GGAGACTGTCGAACGTAGGAACACTACCGTCGAGAGAATGAGGCGACGAC
CACACTCGCAACGGACCGGTATAGCTTACTATCTCGATAGCGTCTCGCGA
GATTTCAAACAGGGCGTGATTGGTGATTGGTGTCGCTGAGATTAATAGGT
AAACATTTTGTGGAAGTCATTTCAGGGAGAGTCGTTGAATGGGCGGACAG
GATTTCTCAAAGAACAATGAACGAAGGGTTAAACAGTAGGTTAGGGACAA
GATGGAAAGAAGGACAACAACTTCGAGTGAACCAGGGGAATGCCTGTCAT
AAAGCCTTGTCGAGTGGTGTCCTCGAAGAAGGCGCTCCACCGCTTGGGAT
TTCTAGATCTATCGGATGTTTCAGGATAACCCTTGAGACGTTCTGGAAGA
CGGACCTCTGCTTGCGCCGTGTTGCTCAATATGTGGTCATGAAGGCTCTC
CAAGACCTACACCTGGACCAAGTCCGGCCCCTTCCACGAGACCCCCCACA
CTAGCGCCGTCGCCAACGTCTGGTGGAGGCACGCCAAGACCTACTGCTGG
ACCAACGCTGGCTCCGACAACATCAGCGCCGTTGCCCACGAGTGGCCCAA
CCGTGGCCGTTCTGCTTCCAGCGCCCAACCTCGAGTCTGCCGTGCTCTCT
GACACGCAAAGGACCTTCTCCCTGCAGTTCAGCAGTACATGCTTTTGTAC
TGAGGTGGGCTGGAGCGGTGCGGATGTGGCACTCTGCGGCTACGACATCG
TTTCAGGGGAGTTTGACAAAGGGTGAGAGGATTAAAAACAATTGTTGGCG
TTTTGTCCGCTGTTTCCGTTTGCTCGCTTCTTGTTTCGGAGAGCTGTGCT
GGGCACCTTTCAGTGCGAAATAAAGCCCGTGAGTCCTAACCGATGCTGAC
AGGCGTGCTGCTGGAAATAAGTATCCCTTTCGTGAGCCTACCTTTGAGTA
CTGCTACAGGACAATAAATGTCTTTGTGTCAACGCCCGCGGAAGTTTGAA
GAGAAGAGGGCATCTATTGGCACTTCTCAAGCGTATCCGTGGGGATCTTA
TGGCACCTGATGTGGTATTCGGTCGATCTCTGGTAGTTCTCGTTTGGATA
GATTCGACATCCAGGAGCACATCTTGATCATGCGCTGAAATTTGACAGCG
TGTGAGCGATTACTGCAATGCAAACGTATTATTGCGTCATTTACTTCCTC
GTTCTGGCGCATAATCTGAATGTGTGGTAGGTGCGCCATCGAGAGAGTGC
TCGACGAGGACACTCGAACAACGTTCGGAAACCAGTCAACTTGCGATTGG
TCGGAAGACAGCTTGACAGCAGTCATCACCTACGATGACGCGTATGCCGA
CTCATGGGAGGCCGGAGTCAACATCACTTTAGCCAGCGGGTGAGGTTTAT
GGTTTTGGAATGCATCGTTTGGATTATCTACAGCGAAGGTTGTCATGTTT
ACGGGCAATGACGAGCCTCGACTTAGATGCCCTCGTACGAAACGTTTGGT
GATATTCTGACCAAATCCAATCATCATGTCTCCTGCAATCGGAACGTTTG
GCACTCGTCGCACCCACCCCACCCGATGCGCTACGGAGGCGGTCATTGTT
ACTCATAGACGACGGGTGGGCCCATATCCCCTTGTAAAGTTTGGCACAAG
GGCTTAATGTTGCCACACTCGTCTCATGTGTGTCCATACGCATAATCACC
CCGCCGCTCTCGGTGGAGCGAAGGCGATGCCAATGAATAGTGTACGTGCA
TATGTGCCACAACCCAGATGCCACACGAATGTTAATCCGAACGTTATTTC
CGCGTTTCAGGTACATTCTTGGAGGGATCCCGTTGGTGTCCGACGGCGTC
ATCGAGTACGCCACAGGAACGGTATCTCTCCAAGGCCGTACCGCCCCGCC
CGAGCTGCTTCAGGTTTGTCATGTGTTTCATACATCGTCTGGTCATGTCC
CTGCAGACAACCAAGCGTCGCATATCGAGTACCGCGTAAACATTAGCCGA
CCCCAGCGGTTTGTGCAGACTTCCCTAGCCCACCAGGTGATTTCAACGGC
GGCAATATGTGCAAAATATGTCCTTCATGCTAGACCGCGACCTGTACTTG
TGGAACGTGCGCAGGCCATGTTTTCAAACGATGGGGAATCGATCATCGTC
GCGTTTTCACCTGAGAGCTCAGCAAGCAGCGGGCTGCTAAACGCCACCGA
TACCGCGTCAGGAAGCGGCCCGGGGCCGTGCGAAGCGCTGCTCAATACAT
CCTCAATTGCCACCATCGGCGAAAGGGCAGCATGTGAGTTTGTTACAAGG
TGTACAACGTCGTAGGTGAAGGGTGTATGTATCAGGCGTAGCTCAATCAA
GTCAACGAGTGCACAACCGGCCATTTTCCCGCTCGGGTGGATACTGTTGT
TCACGGTTTGTGGTGCAATCAGCACGCTGTGCTCGGTTAGTCACGCCAGG
GAGGCGTCGTGCAAGCGATGAACGCTGATACCTGTCCCGTATTATGAAGC
ATGGGGTGTGTTTGTGGTGAGATGTCGTATCAGTTTCGGCATCAGCGATG
AAATCCGCTCCTATAGTCGCGTCCAAAACATGCCCGTTCTCATTTTTCAT
CCAGGCGAATGGACGGGGGAGCGAGCTTTGACCATAGCCCTCGGCTACGG
TGCAATCGTCGAAGCGGACACGGGCTCCGGTGTGTCATGCCTGAGGCAGG
CTTCCTGCATCAGCCTGCTCGACGGTGGCGTCCGCACGGAGGCACTAGCT
GTTCTCTCCTCCGAGGGCTCTACACCAGTGTTGGCCCCTGAGAACCCTCC
TGCGGTATCGGCGGTCCTGGTAGCCCCTCAGGTATAGCCGTCAGACGTTT
GGCCTGGCACCATTGTGTATGGAAACACGCCCACCCGAGGACGTGGATCT
AGGAGCATACGCACCTTTCATCATTGTTGTGGGTGCCGATTTGGTATTTT
TTACGGAAACGAGTGTTGCTACACTGCTACGCCAGACCCCACACGCCATG
CAAGGTGATCATTTGGCATGATGCGTGCTTAGTGGAAGAGGAAAGAATAC
GCGAGAAGTACCGGCATATGAAATACAGCGGTCGTGTGGAGTTTAATATT
GTGAACAAAACAGGCGTTTCCACCTCTACTCTATATTTGGTCTTGTCGTG
TGCAGAGTGAGCGAGGAACTAATTGTCAGCACTATGCACATATTGACAGT
GTCGCAAAAGTGATGTAAGCGCTCACATGCTTTTTGAAAACTGTGCTGGC
AAGAATCAACATACGGCTTCGAAAGCGAGTTGTAGTTGCCTTTCCGAAGG
GTTGGAACGACTCTTCGAAAGAGCTTGGCGATTGCTGTCAGTTTGAAGTA
CACAGAGTCGTGCTCTCCTGATAGCTTGAGGGAAGAACCCCGCTGTGTCA
GATACAAATCGCTTCACCACATACTCACGAGGGGGCCTCGTGCATGACAG
CTAGTGACACAGATGTCGAAACCCTACCCGTTCCCAACCCTCAACGTACC
AAGACCGTGGGGCTATGCGGCACGCTAACGCTAGACGGGCGGGCGTCCTC
AGGGGCACTTTCGCGGACCATGTCGGCGTCCTGGAACGTTTCGGCCGCGT
CTGGCGCCAACACGAGTAGCATCGAAGCTTCTCTCGCGTTGTTTGAAGGA
TCCCTGGTCGCAGAACTCGACGCAGCGGCCTTAGAGCCCGGGGTGGAGTT
CATGTTTGCTTTGACGGTGGGGAACTTCCTTGGCGACACTAATGGAGCGA
ATGTGGCCGTCACGAGAGTGTGAGTAGTGCATCTGAGATATGATTCTATC
TATTTTGGTATCAACCCCGACCCTCCGGTGGGCACAACTGCAGACGATTG
GGCAGTATAGACAGTTCTGGAATGTGGTGCCCTGGAACCAGGTATCATGG
AAGTAGTTCTTGAGCGATCGCCTCTAGACCGCCTTCGTGGGAAACGGGTG
TGTCACATTCGAACACCGAGTCATGTCGACTACAAACCACGCTTCCGCGC
TTCCATGCGATGAAACCAGCGGTGTGTGCTTTGGAGAATTCCGAGGAAAC
GTCGATGACTCACCCGAACGACCCAGCTTCACCTTCGGGAGAGTATCAGT
CATGATACTGTTACTTTTCGTGTGACTCCTAGACAATACGAGGCAAACGA
CAACCACGTGCTCTATAACAGTTTTGCAACCCTTGGATGTCTCGCGTTGG
CACACATGCTCTGTAGAGCCCAGGACGTACCGTCGGTTGCAGTTCTTGGA
TCAGCAACACGAGTTGTGAAGAGGAGCCGACCGACCTCCCTCAGGATCAC
AGCAACATCACCG
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1017:1..4813-

>mRNA_Ecto-sp8_S_contig1017.283.1 ID=mRNA_Ecto-sp8_S_contig1017.283.1|Name=mRNA_Ecto-sp8_S_contig1017.283.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1527bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1017:1..4813- (Ectocarpus species8 EcLAC_412)
CCGACATCGCTCCCGACGACACCATTTCCTTCACCGTCACCCACTAAGAG
CCTCACTTCGGCACCCATTGAGACACCACGGACACGTGGGAAACCATCTA
ACCCCAGGAGACGCTCGAACCTACGCAGTTGCGACGGACCTCTGCTTGCG
CCGTGTTGCTCAATATGTGGTCATGAAGGCTCTCCAAGACCTACACCTGG
ACCAAGTCCGGCCCCTTCCACGAGACCCCCCACACTAGCGCCGTCGCCAA
CGTCTGGTGGAGGCACGCCAAGACCTACTGCTGGACCAACGCTGGCTCCG
ACAACATCAGCGCCGTTGCCCACGAGTGGCCCAACCGTGGCCGTTCTGCT
TCCAGCGCCCAACCTCGAGTCTGCCGTGCTCTCTGACACGCAAAGGACCT
TCTCCCTGCAGTTCAGCAGTACATGCTTTTGTACTGAGGTGGGCTGGAGC
GGTGCGGATGTGGCACTCTGCGGCTACGACATCGTTTCAGGGGAGTTTGA
CAAAGGGTGCGCCATCGAGAGAGTGCTCGACGAGGACACTCGAACAACGT
TCGGAAACCAGTCAACTTGCGATTGGTCGGAAGACAGCTTGACAGCAGTC
ATCACCTACGATGACGCGTATGCCGACTCATGGGAGGCCGGAGTCAACAT
CACTTTAGCCAGCGGGTACATTCTTGGAGGGATCCCGTTGGTGTCCGACG
GCGTCATCGAGTACGCCACAGGAACGGTATCTCTCCAAGGCCGTACCGCC
CCGCCCGAGCTGCTTCAGGCCATGTTTTCAAACGATGGGGAATCGATCAT
CGTCGCGTTTTCACCTGAGAGCTCAGCAAGCAGCGGGCTGCTAAACGCCA
CCGATACCGCGTCAGGAAGCGGCCCGGGGCCGTGCGAAGCGCTGCTCAAT
ACATCCTCAATTGCCACCATCGGCGAAAGGGCAGCATGCGAATGGACGGG
GGAGCGAGCTTTGACCATAGCCCTCGGCTACGGTGCAATCGTCGAAGCGG
ACACGGGCTCCGGTGTGTCATGCCTGAGGCAGGCTTCCTGCATCAGCCTG
CTCGACGGTGGCGTCCGCACGGAGGCACTAGCTGTTCTCTCCTCCGAGGG
CTCTACACCAGTGTTGGCCCCTGAGAACCCTCCTGCGGTATCGGCGGTCC
TGGTAGCCCCTCAGACCGTGGGGCTATGCGGCACGCTAACGCTAGACGGG
CGGGCGTCCTCAGGGGCACTTTCGCGGACCATGTCGGCGTCCTGGAACGT
TTCGGCCGCGTCTGGCGCCAACACGAGTAGCATCGAAGCTTCTCTCGCGT
TGTTTGAAGGATCCCTGGTCGCAGAACTCGACGCAGCGGCCTTAGAGCCC
GGGGTGGAGTTCATGTTTGCTTTGACGGTGGGGAACTTCCTTGGCGACAC
TAATGGAGCGAATGTGGCCGTCACGAGAGTAGCCCAGGACGTACCGTCGG
TTGCAGTTCTTGGATCAGCAACACGAGTTGTGAAGAGGAGCCGACCGACC
TCCCTCAGGATCACAGCAACATCACCG
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