mRNA_Ecto-sp8_S_contig10160.267.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: A0A6H5K2T5_9PHAE (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T5_9PHAE) HSP 1 Score: 77.0 bits (188), Expect = 4.480e-11 Identity = 45/96 (46.88%), Postives = 55/96 (57.29%), Query Frame = 1
Query: 1 GKYVEADNLYLRAIDIGETSLGPDHPDYAVWLGNRTSLLEKKGALEDEARLHRRPDHRDMAKDLHDRAERLRKQGKYAEADPVYLEAIEIQQKTIG 288
GKY EAD L+LRAIDI E +L PDH D AVWLGNR LL + L + L R P + QGKYAEADP+ L A++I + +G
Sbjct: 495 GKYAEADPLFLRAIDIRERTLDPDHHDLAVWLGNRAVLLANQSFLAWKTVLKRFP---------------ITLQGKYAEADPLILRAMDIGKSPLG 575
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: A0A6H5K0C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0C4_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 1.760e-10 Identity = 47/114 (41.23%), Postives = 60/114 (52.63%), Query Frame = 1
Query: 1 GKYVEADNLYLRAIDIGETSLGPDHPDYAVWLGNRTSL---------------LEKKGALED-------EARLHRR--------PDHRDMAKDLHDRAERLRKQGKYAEADPVY 252
GKY EAD LYLRA++IGE +LGPDHP AVWL N+ + + +K L D E RL+ PDH +A L++RA L QGKY EA+P+Y
Sbjct: 8 GKYEEADPLYLRAVEIGEKTLGPDHPTLAVWLNNKAATGVSCGVKLISQLLGGVVEKMFLRDLIFDSQTEIRLYHAAIKEKVLGPDHPSLATTLNNRAGLLEAQGKYVEAEPLY 121
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: D7G7P8_ECTSI (Peptidase-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P8_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 3.000e-9 Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 1
Query: 178 MAKDLHDRAERLRKQGKYAEADPVYLEAIEIQQKTIG 288
M KDLHDRAERLRKQGKYAEADPVYLEAIEIQQKTIG
Sbjct: 1 MTKDLHDRAERLRKQGKYAEADPVYLEAIEIQQKTIG 37
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: D7G890_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G890_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 5.550e-9 Identity = 35/61 (57.38%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 106 TSLLEKKGALEDEARLHRRPDHRDMAKDLHDRAERLRKQGKYAEADPVYLEAIEIQQKTIG 288
T ++++ + E RLH+RPDHR+MAK ++ RAE RKQGKY EA+ +YLEAIEIQ+KT+G
Sbjct: 532 TDMIDEDVITKGEDRLHQRPDHREMAKGMYGRAESSRKQGKYVEANSLYLEAIEIQRKTLG 592
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: D8LLM3_ECTSI (Kinesin light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM3_ECTSI) HSP 1 Score: 63.5 bits (153), Expect = 1.520e-8 Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 1
Query: 1 GKYVEADNLYLRAIDIGETSLGPDHPDYAVWLGNRTSLLEKKG 129
G+ EAD LYLRAI++GE LGPDHPD A WL N+ LL K+G
Sbjct: 8 GEDTEADPLYLRAIEVGEKKLGPDHPDLATWLNNQAVLLRKQG 50
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 61.6 bits (148), Expect = 4.090e-6 Identity = 42/121 (34.71%), Postives = 58/121 (47.93%), Query Frame = 1
Query: 1 GKYVEADNLYLRAIDIGETSLGPDHPDYAVWLGNR-------------TSLLEKKGALEDEARLHRRPDHRDMAKDLHDRAER------------LRKQGKYAEADPVYLEAIEIQQKTIG 288
G + EAD LRAI+IGE LGP+HPD AVWL NR T LL+ +G + + A + + + L R + QGK+AEA+P+Y A EI + +G
Sbjct: 644 GNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELLRAQLLNNPRTGLLKAQGGVVESAG-------QGVVEQLFARCQSPLALTTLLTYLPFTSQGKFAEAEPLYRRATEIWETALG 757
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: D7G6W2_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 1.680e-5 Identity = 27/39 (69.23%), Postives = 29/39 (74.36%), Query Frame = 1
Query: 1 GKYVEADNLYLRAIDIGETSLGPDHPDYAVWLGNRTSLL 117
GKY EAD LYLRAI+IGE +LGPDHP A L NR LL
Sbjct: 613 GKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLL 651
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: A0A6H5JUB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUB0_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 2.680e-5 Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 1 GKYVEADNLYLRAIDIGETSLGPDHPDYAVWLGNRT 108
GKY +AD L+LRAID G +LGP+HPD+A+WLGN +
Sbjct: 909 GKYAKADTLHLRAIDTGGRTLGPEHPDFALWLGNNS 944
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: D8LQL3_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQL3_ECTSI) HSP 1 Score: 58.5 bits (140), Expect = 2.900e-5 Identity = 26/39 (66.67%), Postives = 30/39 (76.92%), Query Frame = 1
Query: 1 GKYVEADNLYLRAIDIGETSLGPDHPDYAVWLGNRTSLL 117
GKYVEAD L LR I++GE +LGPDHPD A+ L NR LL
Sbjct: 298 GKYVEADRLCLRDIEMGEDTLGPDHPDVAIRLNNRAELL 336
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Match: A0A7S3NLA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLA4_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 4.840e-5 Identity = 25/43 (58.14%), Postives = 28/43 (65.12%), Query Frame = 1
Query: 1 GKYVEADNLYLRAIDIGETSLGPDHPDYAVWLGNRTSLLEKKG 129
GKY EA L RAI+IGE SLGP+HPD WL N LL +G
Sbjct: 1 GKYDEAKPLVQRAIEIGEESLGPNHPDLVSWLNNLAVLLINQG 43 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10160.267.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10160.267.1 >prot_Ecto-sp8_S_contig10160.267.1 ID=prot_Ecto-sp8_S_contig10160.267.1|Name=mRNA_Ecto-sp8_S_contig10160.267.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=604bp GKYVEADNLYLRAIDIGETSLGPDHPDYAVWLGNRTSLLEKKGALEDEARback to top mRNA from alignment at Ecto-sp8_S_contig10160:2..6403- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10160.267.1 ID=mRNA_Ecto-sp8_S_contig10160.267.1|Name=mRNA_Ecto-sp8_S_contig10160.267.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6402bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10160:2..6403- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10160:2..6403- >mRNA_Ecto-sp8_S_contig10160.267.1 ID=mRNA_Ecto-sp8_S_contig10160.267.1|Name=mRNA_Ecto-sp8_S_contig10160.267.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1812bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10160:2..6403- (Ectocarpus species8 EcLAC_412)back to top |