mRNA_Ecto-sp8_S_contig1016.266.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig1016.266.1
Unique NamemRNA_Ecto-sp8_S_contig1016.266.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: D7FVC9_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC9_ECTSI)

HSP 1 Score: 442 bits (1138), Expect = 1.160e-155
Identity = 226/245 (92.24%), Postives = 227/245 (92.65%), Query Frame = 1 
Query:   55 MEERLSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPLRADLDGTINVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIEEQMHLYRSSLGVGASGGAQDKTKDTEAWWCTPSTKWSEVKVEKPPVKEPEKPKETTDKDDWWTGVNYNGRKYAAVQNEV 789
            MEE+LSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECL HHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPLRADL GTINVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIEEQMHLYRSSLGVGASGGAQDKTKDTE              VEKPPVKEPEKPKETTDKDDWWTG NYNGRKY AVQNEV
Sbjct:    1 MEEKLSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLVHHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPLRADLGGTINVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIEEQMHLYRSSLGVGASGGAQDKTKDTE--------------VEKPPVKEPEKPKETTDKDDWWTGANYNGRKYTAVQNEV 231
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: A0A835YWA5_9STRA (BTB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWA5_9STRA)

HSP 1 Score: 252 bits (643), Expect = 7.750e-79
Identity = 151/336 (44.94%), Postives = 199/336 (59.23%), Query Frame = 1 
Query:    4 DIGSSGWMKNVDQIARQMEERLSLEGTVVVQRASELQAEAQK-------------------------------LARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPLRADLDGTINVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIEE-QMHLYRSSLGVGASGGAQDKTKDT---EAWWCTPSTKWS---------EVKVEKPPVKE-------PEKPKETTDKDDWWTGVNYNGRKYAAVQN---EVTSSATSQDIPSATSTTWTTG 849
            D+G+  W ++VD +A  ++++LSLEG V+ QRAS+L++EA K                               LARQRAFLR+ERRRARM+EE LR ++A   +TK  +W+P   L     KRV+LNVGGQ+FE S  VL+RDP  LLAALC +  PL+ D DGTI VDRDWW+FRY++KFLRDG LP+D TLL QLYREAGYWRC SL+ AIEE Q+ LYR    V ASGG   K KD    + WW T    W          +V + K   K         EK K T   D WW    Y+G+++A++ +   EV +   S+D+ + T++TW+ G
Sbjct:    3 DLGTECWTRHVDCLAHSLQDKLSLEGVVLSQRASDLRSEAIKAARRIPGWHEQSAGVFVTHAAPLCILHFGLQLARQRAFLRQERRRARMEEEALRHDRAQYEITKRPDWVPRAYLPGPQVKRVKLNVGGQVFEVSAPVLQRDPHSLLAALCDESCPLKTDTDGTIYVDRDWWLFRYLLKFLRDGALPSDRTLLAQLYREAGYWRCSSLRTAIEETQLQLYRGEYEVDASGGVVPK-KDRPTRKGWWNTLPNWWEPQAGAPKADDVTLTKDEAKSFEKLRAAAEKHKVTAAPDQWWVANEYHGQRFASLSSKPDEVVAPPGSKDVLAETASTWSYG 337
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: A0A6H5K801_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K801_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.270e-57
Identity = 99/102 (97.06%), Postives = 102/102 (100.00%), Query Frame = 1 
Query:    1 MDIGSSGWMKNVDQIARQMEERLSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQL 306
            MDIGSSGWM+NVDQIARQMEE+LSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQ+
Sbjct:    1 MDIGSSGWMRNVDQIARQMEEKLSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQV 102
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: A0A7S3ZZW9_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZW9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.090e-54
Identity = 114/274 (41.61%), Postives = 160/274 (58.39%), Query Frame = 1 
Query:   10 GSSGWMKNVDQIARQMEERLSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPLRADLDG--TINVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIEE-QMHLYRSSLGVGASGGAQDK--TKDTEAWWCTPSTKWSEVKVEKPPVKEPEKPKETTDKDDWWTGVNYNGRKYAAVQNEVTSSATSQDI 816
            G     +++  + R++  RL LE TV+  RA EL+ EA+K ARQRAFLREER+RAR ++E +  + A L     D+W P + L    +KR+RLNVGGQ+FE + A L  DP  LLAAL  +  PL  D  G     VDRDWW FR+++ FLRDG+LP   +L   LYREA +WR  SL+RA+EE  +HL R+ + V A G   ++  TK+++ W   P+  W          KE EK ++  D D W    +Y G ++A   +     ATS+D+
Sbjct:   23 GGGAMTQDLGGLERELSSRLELEHTVLEARAQELRREARKQARQRAFLREERKRARDEKEAIIRDAAKLEHRDKDDWFPRDYLDATPQKRLRLNVGGQIFEINVAKLDNDPDSLLAALAAEDCPLFGDDRGKRVAYVDRDWWTFRHVLAFLRDGVLPASPSLALPLYREAAFWRLGSLQRAVEETHLHLTRTKIDVDAKGEVTEEKQTKESKFWLSKPNW-WEAQAPSSSKKKEGEKGEDDKDPDWWKDRDDYRGARFALSTDPEKVVATSEDV 295
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: A0A6H5K3B7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B7_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 1.720e-51
Identity = 90/105 (85.71%), Postives = 92/105 (87.62%), Query Frame = 1 
Query:  559 MHLYRSSLGVGASGGAQDKTKDTEAWWCTPSTKWSEVKVEKPPVKEPEKPKETTDKDDWWTGVNYNGRKYAAVQNEVTSSATSQDIPSATSTTWTTGDDNSPPCI 873
            MHLYRSSLGVGASGGAQDKTK TEAWW TPSTKWSEV  EKPPVKEPEK KETTDK+DWWTG NYNGRKYAAVQNEV SSA SQDI  ATSTTWTT DD SPP +
Sbjct:    1 MHLYRSSLGVGASGGAQDKTKGTEAWWRTPSTKWSEV--EKPPVKEPEKLKETTDKNDWWTGANYNGRKYAAVQNEVKSSAASQDIQLATSTTWTTRDDISPPRV 103
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: A0A7S3ME34_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3ME34_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.560e-46
Identity = 103/255 (40.39%), Postives = 144/255 (56.47%), Query Frame = 1 
Query:   25 MKNVDQIARQMEERLSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPLRADLDGTI-NVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIEEQMHLYRSSLGVGASGGAQDKTKDTEAWWCTPSTKWSEVKVEKPPVKEPEKPKETTD------KDDWWTGVNYNGRKY 768
            ++ + QI R      SLE  V  +R ++L A  ++L RQRAFLR+ERRR R+  + +   K  L++ +  +W+P E L   +E  V +NVGG +FE+  ++L+RD   LLA LC    P+  D DG     DRDWW+FRY++ F+RDG LP D TLL+QLYREA +W   S++RAIEE+    RS+L      G+ DK K    WW    + W  V        +  K KE TD      K+DWW   +Y G+ Y
Sbjct:    7 LEKLHQIQRIFYVEDSLESAVAGERVAQLIARTEQLLRQRAFLRDERRRLRISTDKIEERKKALTIIQRPDWLP-ESLKPTAEAHVLINVGGLMFESPVSILKRDEKSLLAQLCSPNPPVLPDPDGGFFYFDRDWWLFRYVMAFMRDGTLPEDRTLLSQLYREAVFWNLSSMQRAIEEERLHLRSALHPD---GSTDKNK---VWWRKLPSWWQAV--------DEAKNKEKTDAAAVKKKEDWWLDTSYKGKTY 246
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: A0A7S2R746_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R746_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.570e-44
Identity = 117/315 (37.14%), Postives = 160/315 (50.79%), Query Frame = 1 
Query:   70 SLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECL---AHHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPL---------------------RAD------LDGTINVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIEE-QMHLYRSSLGVGASGGA-----QDKTK---DTEAWWCTPSTKWSEVKVEKPPVKEPEKPKETTDKDDWWTGVN----------------YNGRKYAAVQNE---VTSSATSQDIPSATSTTW 840
            SLE  VV  R+ +L+ EA +LARQRAFLREER++AR +E+ +  + A L   +  +W P ECL   A    +RVRL VGG+LFE S  VL +DP  LL ALC +  PL                     R D        GT+ VDRDWW+FR I+ FLRDG++P D T   QLY+EA +WR ESL+RAIEE  ++L R    +   G       +DK K     + WW   ST+ S+   +K    +    ++   + DWWT V+                YN R +A + ++   V + A   D     S+TW
Sbjct:   35 SLESCVVQARSEKLEREALRLARQRAFLREERKKAREEEQAIERDTALLDFVRRPDWWPGECLDGAAGDPARRVRLRVGGELFEVSKDVLCKDPGSLLCALCAEDCPLMLTRRGRPGGEGEGEDQVDGEREDEGTERRTPGTVVVDRDWWLFRLILCFLRDGVVPRDRTTALQLYKEASFWRLESLERAIEEAHLNLSRKQFELDDKGEVSVSELEDKDKFWKSRKNWW--ESTRQSKEDEDKKTAADAAAEQDAAAQGDWWTSVSRVSLGEHTHLTTLETAYNERAFAPLSSKPGKVVTKAGEDDAAPMLSSTW 347
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: A0A225X1W3_9STRA (BTB domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X1W3_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.560e-42
Identity = 97/287 (33.80%), Postives = 150/287 (52.26%), Query Frame = 1 
Query:   52 QMEERLSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPLRADLDGTINVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIE-EQMHLYRSSLGVGASGGAQDKT-KDTEAWWCTPSTKWSEV--------------------KVEKPPVKEPEKPKETTDKDDWWTGVNYNGRKYAAV--QNEVTSSATSQDIPSATSTTW 840
            Q EE+  L  TVV  +   L+ + +++A+QRAF+R E+R+  +   +L  E+     ++  +W         S++R+ ++VGG+LFE S A+  +D   LLAA   D  PL A   G   VDRDW +FR+I++FLRDGILP+D  LL  LY E+ +WR ESL +AIE + + L++     G  G A++ T KD  AWW  P T W                       K +K   K+ E   + ++ ++WWT   Y G  Y  +  ++++   + +   P  TS TW
Sbjct:   41 QEEEQTLLHRTVVDSKRQNLELQYERVAKQRAFIRREKRKLLLQHALLTSERERFEASRSSDWFCLATFPAASDRRITIDVGGELFELSAALASKDSTSLLAAFVQDDSPLSAAESGCFRVDRDWRLFRHILRFLRDGILPSDPKLLRDLYVESEFWRFESLLKAIETKNLELWQLKQKSGTHGSAKENTSKDLSAWWLNPPTWWGTTSGGDKAKEKMGKATLLSSFQKAKKSNAKKAEV--DDSELEEWWTKSKYKGTDYMDILARDKIVDGSRTPRSPLITSHTW 325
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: G4ZZJ9_PHYSP (BTB domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZZJ9_PHYSP)

HSP 1 Score: 156 bits (395), Expect = 7.870e-42
Identity = 84/200 (42.00%), Postives = 121/200 (60.50%), Query Frame = 1 
Query:   52 QMEERLSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPLRADLDGTINVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIE-EQMHLYRSSLGVGASGGAQDKTKDTEAWWCTP 648
            Q EE+  L  TVV  +   L+ + +++A+QRAF+R E+R+  +   +L  E+     ++  +W         S++RV ++VGGQLFE S AV  +DPA LLAA   D  PL A   G   VDRDW +FR+I++FLRDG+LP+D  LL  LY E+ +WR ESL +AIE + + L++S     A G  + +TKD  AWW  P
Sbjct:   41 QEEEQALLHRTVVASKRQNLELQYERVAKQRAFIRREKRKLLLQHALLASERERFDASRSSDWFCLAAFLAASDRRVTVDVGGQLFELSAAVASKDPASLLAAFVQDDSPLTAAESGCFRVDRDWRLFRHILRFLRDGVLPSDPKLLRALYIESEFWRFESLLKAIEAKNLELWKSKQSSDA-GAKEKETKDPGAWWLDP 239
[Close]
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Match: W2KIH1_PHYPR (BTB domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2KIH1_PHYPR)

HSP 1 Score: 155 bits (393), Expect = 1.140e-41
Identity = 99/285 (34.74%), Postives = 146/285 (51.23%), Query Frame = 1 
Query:   52 QMEERLSLEGTVVVQRASELQAEAQKLARQRAFLREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGGQLFEASTAVLRRDPACLLAALCHDGGPLRADLDGTINVDRDWWMFRYIIKFLRDGILPTDTTLLTQLYREAGYWRCESLKRAIE-EQMHLYRSSLGVGASGGAQDKTKDTEAWWCTPSTKWSEVKVEKPPVKEPEKPK------------------ETTDKDDWWTGVNYNGRKYAAVQ---NEVTSSATSQDIPSATSTTW 840
            Q EE+  L  TVV  +   L+ + ++ A+QRAF+R E+R+  +   +L  E+     ++  +W         S++RV ++VGGQLFE S +V  +D A LLAA   D  PL A  +G   VDRDW +FR+I++FLRDGILP+D  LL  LY E+ +WR ESL +AIE + + L++ +   G++  A  +TKD+  WW  P + W      K   KE +KPK                     + + WW    Y G  Y  +      V   A +   P  T+ TW
Sbjct:   41 QEEEQTLLHRTVVASKRQNLELQYERFAKQRAFIRREKRKLLLQHALLASERERFDASRSSDWFCLASFPAASDRRVTVDVGGQLFELSASVALKDSASLLAAFVQDDSPLTASENGCFRVDRDWRLFRHILRFLRDGILPSDPKLLRDLYVESEFWRFESLLKAIETKNLELWKLNEN-GSTKAATKETKDSSEWWLDPPSWWGNTGTNKAKDKE-KKPKTLQNTFKKSAMAIVKKGESDEESEAWWKDSKYKGTDYMDILARGKSVHDDARTPRSPLVTNHTW 323
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig1016.266.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVC9_ECTSI1.160e-15592.24BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YWA5_9STRA7.750e-7944.94BTB domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A6H5K801_9PHAE1.270e-5797.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3ZZW9_9STRA3.090e-5441.61Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A6H5K3B7_9PHAE1.720e-5185.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3ME34_9STRA1.560e-4640.39Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2R746_9STRA1.570e-4437.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A225X1W3_9STRA1.560e-4233.80BTB domain-containing protein n=1 Tax=Phytophthora... [more]
G4ZZJ9_PHYSP7.870e-4242.00BTB domain-containing protein n=1 Tax=Phytophthora... [more]
W2KIH1_PHYPR1.140e-4134.74BTB domain-containing protein n=8 Tax=Phytophthora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig1016contigEcto-sp8_S_contig1016:9792..16749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score446.0
Seed ortholog evalue1.3e-122
Seed eggNOG ortholog2880.D7FVC9
Model size893
KEGG rclassRC00460,RC00461
KEGG koko:K11835,ko:K17868,ko:K21922
KEGG ReactionR11166
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515
Exons9
EggNOG free text desc.protein homooligomerization
EggNOG OGsKOG2723@1,KOG2723@2759
EC3.1.1.97,3.4.19.12
Cds size876
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko03012,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig1016.266.1prot_Ecto-sp8_S_contig1016.266.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig1016 9809..16749 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143113.7415342-UTR-Ecto-sp8_S_contig1016:9791..98081681143113.7415342-UTR-Ecto-sp8_S_contig1016:9791..9808Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig1016 9792..9808 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143113.7524061-CDS-Ecto-sp8_S_contig1016:9808..98981681143113.7524061-CDS-Ecto-sp8_S_contig1016:9808..9898Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1016 9809..9898 -
1681143113.7617514-CDS-Ecto-sp8_S_contig1016:10142..102561681143113.7617514-CDS-Ecto-sp8_S_contig1016:10142..10256Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1016 10143..10256 -
1681143113.7708204-CDS-Ecto-sp8_S_contig1016:10735..107771681143113.7708204-CDS-Ecto-sp8_S_contig1016:10735..10777Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1016 10736..10777 -
1681143113.7803373-CDS-Ecto-sp8_S_contig1016:12113..122451681143113.7803373-CDS-Ecto-sp8_S_contig1016:12113..12245Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1016 12114..12245 -
1681143113.7901783-CDS-Ecto-sp8_S_contig1016:13293..133661681143113.7901783-CDS-Ecto-sp8_S_contig1016:13293..13366Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1016 13294..13366 -
1681143113.8001986-CDS-Ecto-sp8_S_contig1016:14292..144141681143113.8001986-CDS-Ecto-sp8_S_contig1016:14292..14414Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1016 14293..14414 -
1681143113.8099053-CDS-Ecto-sp8_S_contig1016:15729..158531681143113.8099053-CDS-Ecto-sp8_S_contig1016:15729..15853Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1016 15730..15853 -
1681143113.8200655-CDS-Ecto-sp8_S_contig1016:16062..161121681143113.8200655-CDS-Ecto-sp8_S_contig1016:16062..16112Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1016 16063..16112 -
1681143113.8297987-CDS-Ecto-sp8_S_contig1016:16620..167491681143113.8297987-CDS-Ecto-sp8_S_contig1016:16620..16749Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig1016 16621..16749 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig1016.266.1

>prot_Ecto-sp8_S_contig1016.266.1 ID=prot_Ecto-sp8_S_contig1016.266.1|Name=mRNA_Ecto-sp8_S_contig1016.266.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=292bp
MDIGSSGWMKNVDQIARQMEERLSLEGTVVVQRASELQAEAQKLARQRAF
LREERRRARMDEEVLRLEKADLSMTKDDEWIPAECLAHHSEKRVRLNVGG
QLFEASTAVLRRDPACLLAALCHDGGPLRADLDGTINVDRDWWMFRYIIK
FLRDGILPTDTTLLTQLYREAGYWRCESLKRAIEEQMHLYRSSLGVGASG
GAQDKTKDTEAWWCTPSTKWSEVKVEKPPVKEPEKPKETTDKDDWWTGVN
YNGRKYAAVQNEVTSSATSQDIPSATSTTWTTGDDNSPPCI*
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mRNA from alignment at Ecto-sp8_S_contig1016:9792..16749-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig1016.266.1 ID=mRNA_Ecto-sp8_S_contig1016.266.1|Name=mRNA_Ecto-sp8_S_contig1016.266.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=6958bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1016:9792..16749- (Ectocarpus species8 EcLAC_412)
ATGGATATCGGATCAAGTGGCTGGATGAAAAATGTTGACCAGATTGCCCG
GCAGATGGAGGAAAGGCTGAGTTTGGAGGGGACCGTAGTCGTTCAGAGAG
CGAGCGAGCTGCAAGCGGAAGCGCAGAAGGTGATCTGCTTGTGATGACTC
GACAGCGAGCTAATATAATAGCATTTGTACCACATCTATCATGGAAATAT
CGTAAAGGCGGCACAATGTGGTTTTGCGTACAAATATGTTATAGATCTTT
TTGATCCGCAAACCCTCATGCGGTGCAAACCATGGACACTACAGCTGTAC
TACAGCAGTACAGCAGTACTGCTGTACTTCGAAGGAAGAGCAGCCTCTGC
TGTAGACTACGGAGTATGTATGTACAGCAGTGGTACCGGACATGTTCAGC
AGACTACATATACTGCTGTGTGCAGTAGTAATGTACGGTCACACACCATC
ATGAAGCCACTACTGTACAGAGAAACATTTCGTGTAACCCAGATCGAAAC
TCTTCAACGAAGGAAAAACGGGTCATAAGGTAGCTACAGGAGTAGAGAGT
GTTGTGACGGTGAATGGGAAAGTAGGTATCACTCAGCTAAACGCGTTTCC
GCCGTATCTTCCCGCCCTCCAATACCACGCCCCTCAGCTGGCTCGGCAAC
GTGCCTTCCTACGAGAAGAACGGCGACGAGCTCGCATGTGAGCTGCCCTT
TTTCCTTTGGATTTCATTCTGAAAGTGTGGCGGAAGGTAGATTGGGTATT
TGGTCAGCTTGTGCCGAGGCGAAAGTTATCTAACAGGTGCGAGACGTTGA
TTGCAATGAGATGCGGAGTGTTGTAGTCTACTGCTGTCTACGGTGTTTTT
CGGTGTCCGTCAGGAGTGCTTTTCGTCCACTGACCATTCCTCTCAGGGAT
GAGGAGGTGCTTCGTCTGGAAAAAGCCGACTTGAGCATGACGAAAGATGA
CGAGTGGATTCCAGCGGAGTGCCTTGCACACCACTCCGAGAAGAGAGTCA
GACTTAATGTTGGCGGACAGGTGTGAAATGTTGACTTCGGATTCTGCACT
ACTTGCTTGCCGTAGGGAATAAACCTTCCTGGAACGCCCAGTTTTCTGAT
ACTGACACTAGTTATGAATAAGTATTTAGAACGTTTGGAAACCATGAAAT
AATTACGTCGAAGGAAGGTTCGCCGTGTGGCAACATGTTGAATTCAGCGT
ATATTTCAGCTTCAAGACACACAGTACCTTCGTGCAGCGTCGCAAACCCA
ATTCTTTGAAGAAATTCTCCGCATGTAGGCATACATGAGCTGGGGCATAG
TGCACGATGTGTTGTGGATATGTAGCTCGAGGTGAAATCCGACCTTGGAT
CCGATCGCCAGTTTCATTAGGGCTTGGCATGGCTTGCTCACCGAAAGCTA
GAGTGATGCGCTTCAAGAAAGTCCAATCGTCTTGTTAGATGTGCAGAGCC
GGAGCCTCTGTAGTGAATGGCTGGGTTGAGCGCGAGGCCCCATTCTCCGG
ACAATGCAGTATGAACATGCCTGCCTTCCACTGAGGACAATCGGCCGAAC
AACTACGATGGACCGATAGATGGACCACGTGCGTGACTATGCAACATCTT
TGCAAGATCTCGATCTTGTTTTATGCAATTCCAAAACAAATTTGCCGTTG
AAATCTTTTATATTTTTCTGGCGCCTGTCTCTGTCGTCCTGATGTCTAGC
AATACTCTAATGCCAGTACAAGTAGTGCACTTGGGAGCCCACTGCCTTGT
ATCAGCACGATACGCGGTATCTCAAACAACATGTGCACGTGTTGATTCTC
GTTGGCTAAAAATCAAATGAACGCCAGTGGGGGGGGTAGGTGGTTACTGC
AAGGAGGGGATGAACGACTCGGCCAGTTCCGTAGCGCACCTGGGTACATG
CTTCCATGGGTTTTACGCAGAGAAAACTATAATAACTGCACCTGGGAAAT
TACGACGAATCAACAAAGCCCGCAGCTCGGCAAACCAGCAAAGTTTCGCT
ACAAAAATGAATTCATCTTTGTGTCGCATCGCGGGCAAACGTAGCAACGA
CTTGGTTTCCTCCACGTCCTGCGTCAGCACCATGTATGGCGCAAAGACGA
TCGGACCCCTTTCGAAGATCTAATGAGTGGACCGAGGCCCAGCAAAACGT
ATTGACCGATCGAGGGCCTGGCTGCGGTTTGTCTCACGAAGCCCGTGGGT
AGGTAGGTACAAGGCGTTTTCTTTTACCATCAAGTTCGCGACGTCTTTCT
CATGCCAAAGCCGCTCTTTCTCCTCTGTCATTTTGATTGTCCATGCTTCC
TCCCATGGGCTCCCCCATTCCCGCCATTGCCGTAGCTTTTCGAGGCGTCG
ACAGCTGTCCTTCGACGAGATCCTGCTTGTCTTCTGGCCGCTCTCTGCCA
CGACGGCGGACCGCTGAGAGCGGACCTTGACGGTACCATCAACGTTGATA
GAGACTGGTGAGCTAAGTACTCCGAGGATCTCAACCGTGTGGAAAAAACG
TGTTTAGCTCGAAGCGTGTGAACGGTTTGTAGGGGAAGGTTGGTACCGCA
GACTTAGTGGCCAGACTGGGTGACGTCTTTTGGAAAAGGTGTTCATATCC
AACCGGACACAGTAATGTTAGTATGTATCAATGGTTTCCACGCCACCTAG
CAATGACACATAGATGCGGTGTGACGTAAGGTTTGGCAGAGCGTAGCTTG
TAGCGACGAGTATAGCGAGGAGCTCGTGAATTAATTGATTGTTGATCTTA
GGCATTGTAATTCTAGCGAGATCACGAGGTGTCGAGAGCCCCATCAGGCT
CACTCCCAACTACCAACATCTCACCTGCAAGAGTCTGTGAAGTGAACAAG
ACTGACAACAAGTACAAGTCCCAGAAGCGGCATTAGCAACAACATCGATA
TCGGTCACTGCCTCAACAGACTTCGGTCCGATTAGACTATTGTCTAAACG
TTATTACACAGACTTCTGTCTGGAACTGCACAAAGACTTAACCGCCTGCA
GACGACCCTTGGGTACAGGGCACCTGGACACTACACACTTCTACAAACTA
CTCCGATTGAATGGCACCTCTCCGCATGAGGTTTTGAATAATTTATCTGC
CCTACGTGCTTCGCAGTGGAACGAACTTTGCATATAGGTTTCAATTGCTA
TGCTGATCTCAACAGGTGTAAGTCGTACGCGATTCCACCTGTCCGCATGA
AGGAGTTGCAATAATGGTTTTGCAGCTGTTCTCAAGAACACCGATGGGCT
GTTCTATAGGCATGCACACATAATGTGGAGGTATCATTTTTCGTGTGCGG
ATATGCATTGGAAGTGTCTGACGTGGGTGTTTCCCGTGACCTCGGTGATT
TGTTGTTCTGGGAATGCCTTCCCTCTATCGCAGGTGGATGTTTCGGTATA
TCATCAAGTTCCTGCGTGACGGCATTCTACCTACTGACACAACGCTGCTG
ACTCAGGTGAAGAGCGTCCAAAGTGTCTTACGATCAGTTCCAGGGCTGTG
GGTTTCCCGGAGAATGCGTATATTTGGTTGGTTTTATTTCTCGGTCACGC
ACGAGATCTGACTACTATATAGGCGCATTTGGGGTAGCATATCAGAAGAA
TACATTACTATTTCTGGTTCGACAAGACGCTAGAAAATCTCAACATGGCC
TCTGAGGGCTATTGTTATCCGCCCCTGATTGTCACGAGGTGACGCTATTG
CAAACAGGACAGAACACTTTATTCCGTCCATGTGCTGTCGACAGCATCCT
CCTTGCCTCAGTTGCCCAACATGAGTCACCTGTAGCCACCATCGATGGCT
CAAAGTCTTCAACTCCTGAACGGCATGGACCCCCTCTCCCCGACAAACGA
CCCAAGTGGGAGAACCTCCTTGACTGGGGCCCGTATGTATTTATGCGGCT
GTCTTCTAATTCCAAGATGCTGGCCCGCGTAGAGACTTATCGCGCAACTA
TCTCTCGATATCCGTGCTGAAAGAGCCACACGCCAGTCCGAAATCAATCG
TCGAACCTGAGTATGCATGCGTCACAAGAAATGGCGTCGTACTTTTGGAT
AGGTAGAGTTTCTCCCATTTTTTTTAAATGGAGGAACCCAACTTGGTCGT
GTGCTGTCGGTAAAATGGTGATATGTGGCAGATAATGTACTTAAATACTT
TACGAAGCGTGCTTCAAGAGAAGTCAAGTCTAGCGCGTAGGCCTATGCTC
ATTTTGCTTGAATGGGGAACACGCCACAGCGTGCGCAATATCAAGATCAA
GTTGCAAATTCAACCACATATCGAATAATGACATGGTACCCTACAATAGA
CGCCTCTCTTTTGTTCCGAAAACGAAAATGATTTTGTTTCTATTGGGCTT
ACGCTTAGCAGAAGACGAGGGCGAGCGAACCAGAATACAACTGATGTGCT
GTGCCTCAGGTGACCGCCCTCGTCAGTAATTGCCCCTGAAACCTGAAAAT
ACACGTCATCATCAGTTGATACTCTTGTATACTTTGTGCGCGTTACGTGA
ACAGCTCTATCGTGAAGCTGGATACTGGCGTTGCGAATCATTGAAGCGCG
CCATCGAGGAGCAGATGCATTTGTACCGCTCCTCGCTTGGAGTTGGTGCT
AGCGGTGGTGCACAAGACAAAACGAAAGACACGGAGGTACGTCCAACGCC
TGGTTGGCGAGAATGATCTCTTGCATAAGAAATCTTAACCGGTTGCAGTT
GCTGCACGATCAAATATCCAATTGCTCCCGTTGTGATGGGAACAGAATGT
GTCTTGTTGTTTTCCGAATTTTCCCAGCAGGAATATGTTTCAATTGCAAT
GGGCAAACAGTTCTTTCCCCAGAATGCTAGCCTAGATATGAATTATCCGA
AACGGCCATCTCGTGGTCAAACCCAGGCCCCAAGATTTTGAAATGGGAGA
ACAGGGTCGAAAGTTTAGACCGGGAACGACAAGGTTAGATTGCTCCGTAG
ACGTTCGTCTACCAAATAATCGCTTGCATCCAGAACCCAACAGCTGGCAC
AATAATAGTCTGGAGGGTTCTCGAGCGTCCTTGGTGCACGGCGATGACGC
TCTGAGGGCGCTAATGGCTGCCAGCACTAAATGAGACGTGTTATTGAAAC
ACGTTGGTCTTTGCAGAACATGCGTCCTGCCACTCGTCGGAAGCATGATC
AAGCCATGAGTGGACGACGTCCCGACACATATTCCACTCCATTACTAACA
CTCCAGCATGGACACACCTCCATGCCCTCTGCCATCCATAGCCGCTTCTC
TCATCTGGTGGCGGGTGGGATGGCTATGGGGCGAATTAATCAAAAGCTAG
ACATACTCTCGGCATCGTCTTGATTGCGGTCGAAGAAACACTTCGCTTTC
AAGTAAACCCGAACACTAGGTAGCGAACTGTTTAGAAAGAGCTCAGTCGT
GCGTGCGATGCCTCTAGCTCTTTGTCGAAGCACCCCGATGCATCCACCTG
TACCCGAAGTACACCATCGAGCGCAGCTGACGGTACCGAATGTAGACTTC
GACAAGTTGACTGCGGAGGGAGATATTTGCGTGGATGCGATTCAATCTTG
GCTCGAGGTGTTTCGGCCGTTGGGAAAGACATGCGCTTAGTTTCTTCGTG
GGCACGAAAATGACGGCCAACGTCCTTAGGTTTAGGCATTCGTCGCTATG
AGATTTTGGTTGGATTTGCGGACTGAGAGAACGATGCGCGTCAAACAACG
TGAACATTGAGGGGAAGAGGAAAGACACCGCACATCGAAAGATCCTCAAT
GCAAAATTCGGTAATTCGACAGCAGATCCGTGCGATCAATGGGGCAGAAT
TCTTTTTTTTTTGGCAACGTTGGGTCCCCCCAAAAGGATGTTTCAATAAC
AGAGGTGCAGTACACCTCTGAGGTGCTCTAAAAGTTCGTAGACTCCCTTG
CCGAGGACACACTTCTCAAATAAGAATGGGGATAACGAATTCCTCGCCGC
TCATATGCCCCCGGTTGCGCAGGCATGGTGGTGCACGCCGTCGACCAAAT
GGAGCGAGGTGAAGGCGAGTCGCCCTGCTTTGACTTCAAGAGCATGACGT
GGTATCACTAACGACCACCCTCAACATGTACCTACGACGTCCCACCAGCT
ACAACCAGGCGCACGTCGACTGAGGAGCACCGATTGAATGCCGTACCTCG
CATTGCCAGCTGGATATCTCACGTATCCAGCCTTTTCGCTCGTGTCATCT
AAACAATATCATGGGTTACAGGCCCATGCTGTTGTTTTATTGGGGCGAAG
TACTCCCCCTTTCGCTCGTGTCATCTACCATAACAATATCATGGGTTTCA
AGCCCATGCTCTTGTTTTAGTGGGGCGAAGTACGTCCCTTTTCGCTCGTG
TCATCTAAACAATATGATGGGTTACGGGCTCATGCTCTTGTTTTGGTGGG
GCCAAGTACTCCCTTGGATGAGGAGCACATGTTGTTAGATAGCGATAAGA
GGTGTATGACTTTGCCAACTCTGTGAGATGTTTTTGTCACCAGGTGGAGA
AGCCACCCGTGAAGGAACCCGAGAAGCCGAAAGAGACAACGGACAAGGAT
GATTGGTGGACAGGGGTAAACTACAACGGAAGAAAGTACGCTGCTGTTCA
AAATGAGGTATCTGCATAAACGTAGGAAAATAGAGCTTGTACAGGGTATA
TATTGCTCATTTATATATTCCAATCTCAGCTTTTGGGAGCTCATCGCAAG
GCTACAGTATCTACTCTATTTTGTTATTGGGAAGCACAAGAGGTTCCACG
TTCCAACCTTCCACATCGAAGCTTTTGCGCCGACATTTCTCCCGGCCGCC
ATTGGTGAGAACTCAGTCCCAGCTTAATGTGCAGGTCATCTGTTGGTGCA
GGTAACATCATCTGCGACGAGTCAAGACATCCCATCGGCGACGTCCACGA
CGTGGACAACAGGGGACGATAATAGTCCACCGTGTATTTGACAGAGTACA
GAGTTAAT
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Coding sequence (CDS) from alignment at Ecto-sp8_S_contig1016:9792..16749-

>mRNA_Ecto-sp8_S_contig1016.266.1 ID=mRNA_Ecto-sp8_S_contig1016.266.1|Name=mRNA_Ecto-sp8_S_contig1016.266.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=876bp|location=Sequence derived from alignment at Ecto-sp8_S_contig1016:9792..16749- (Ectocarpus species8 EcLAC_412)
ATGGATATCGGATCAAGTGGCTGGATGAAAAATGTTGACCAGATTGCCCG
GCAGATGGAGGAAAGGCTGAGTTTGGAGGGGACCGTAGTCGTTCAGAGAG
CGAGCGAGCTGCAAGCGGAAGCGCAGAAGCTGGCTCGGCAACGTGCCTTC
CTACGAGAAGAACGGCGACGAGCTCGCATGGATGAGGAGGTGCTTCGTCT
GGAAAAAGCCGACTTGAGCATGACGAAAGATGACGAGTGGATTCCAGCGG
AGTGCCTTGCACACCACTCCGAGAAGAGAGTCAGACTTAATGTTGGCGGA
CAGCTTTTCGAGGCGTCGACAGCTGTCCTTCGACGAGATCCTGCTTGTCT
TCTGGCCGCTCTCTGCCACGACGGCGGACCGCTGAGAGCGGACCTTGACG
GTACCATCAACGTTGATAGAGACTGGTGGATGTTTCGGTATATCATCAAG
TTCCTGCGTGACGGCATTCTACCTACTGACACAACGCTGCTGACTCAGCT
CTATCGTGAAGCTGGATACTGGCGTTGCGAATCATTGAAGCGCGCCATCG
AGGAGCAGATGCATTTGTACCGCTCCTCGCTTGGAGTTGGTGCTAGCGGT
GGTGCACAAGACAAAACGAAAGACACGGAGGCATGGTGGTGCACGCCGTC
GACCAAATGGAGCGAGGTGAAGGTGGAGAAGCCACCCGTGAAGGAACCCG
AGAAGCCGAAAGAGACAACGGACAAGGATGATTGGTGGACAGGGGTAAAC
TACAACGGAAGAAAGTACGCTGCTGTTCAAAATGAGGTAACATCATCTGC
GACGAGTCAAGACATCCCATCGGCGACGTCCACGACGTGGACAACAGGGG
ACGATAATAGTCCACCGTGTATTTGA
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