mRNA_Ecto-sp8_S_contig10154.250.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: A0A6H5L1Z6_9PHAE (Ccc protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1Z6_9PHAE) HSP 1 Score: 160 bits (404), Expect = 9.680e-44 Identity = 85/86 (98.84%), Postives = 86/86 (100.00%), Query Frame = 1
Query: 1 QASQRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVEV 258
QASQRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVE+
Sbjct: 101 QASQRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVEI 186
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: A0A835Z2U9_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U9_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.250e-30 Identity = 60/83 (72.29%), Postives = 75/83 (90.36%), Query Frame = 1
Query: 10 QRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVEV 258
+ KLGT+KGVF PC QNILGVI+FIRLP+I GQAG+++T++I+ ++KL T LTTLSM+AIATNG VQAGGPY+IISRNLGVE+
Sbjct: 90 ESKLGTMKGVFLPCFQNILGVIVFIRLPYITGQAGIWMTMLILFLSKLTTVLTTLSMSAIATNGTVQAGGPYFIISRNLGVEL 172
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: A0A7S1BPY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPY8_9STRA) HSP 1 Score: 115 bits (288), Expect = 4.200e-28 Identity = 57/83 (68.67%), Postives = 70/83 (84.34%), Query Frame = 1
Query: 10 QRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVEV 258
+RKLGTV GVF PC+QNILGVILFIRLPFI GQAG FL +++++ AT T+LS++A+ TNG +QAGGPYYIISRNLGVE+
Sbjct: 96 ERKLGTVNGVFLPCLQNILGVILFIRLPFITGQAGCFLASLMLVICFTATFTTSLSLSALVTNGSIQAGGPYYIISRNLGVEI 178
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: A0A7S2K263_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K263_9STRA) HSP 1 Score: 112 bits (279), Expect = 7.300e-27 Identity = 58/84 (69.05%), Postives = 68/84 (80.95%), Query Frame = 1
Query: 7 SQRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVEV 258
S KLGT+ GVF PC+QNILGVILFIRLPFI QAG T +IIL+ +T LT LS++AIATNG +QAGGPYY+ISRNLGVE+
Sbjct: 141 STAKLGTLTGVFLPCLQNILGVILFIRLPFITSQAGCIQTTLIILMCVTSTFLTALSLSAIATNGTIQAGGPYYVISRNLGVEI 224
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: A0A7S3Z721_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z721_9EUKA) HSP 1 Score: 102 bits (253), Expect = 3.160e-25 Identity = 51/86 (59.30%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 1 QASQRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVEV 258
+++ +K GT GVF C+ NI GVI+F+RLP+ VGQAG+ LTIVII ++ + TT+TTLSM+AI TNG+V+AGG YY+ISR+LG V
Sbjct: 81 ESTGKKFGTWNGVFVSCLLNIFGVIMFLRLPWTVGQAGIGLTIVIIFISNVVTTITTLSMSAICTNGEVRAGGAYYLISRSLGPRV 166
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: A0A7R9YE43_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE43_9STRA) HSP 1 Score: 106 bits (264), Expect = 7.750e-25 Identity = 51/80 (63.75%), Postives = 67/80 (83.75%), Query Frame = 1
Query: 16 KLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVE 255
KL T+KGV+ PC+QNILGVILF+RLPFI QAG LT +I+ + ++T LT LS++A+ATNG+++ GGPYYI+SRNLGVE
Sbjct: 79 KLDTLKGVYLPCLQNILGVILFLRLPFITAQAGTILTSLIVTLCTISTFLTALSLSAVATNGKIREGGPYYIVSRNLGVE 158
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: A0A2R5GRV7_9STRA (Solute carrier family 12 member 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRV7_9STRA) HSP 1 Score: 105 bits (263), Expect = 1.070e-24 Identity = 56/84 (66.67%), Postives = 70/84 (83.33%), Query Frame = 1
Query: 4 ASQRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVE 255
A+ ++ GT+ GV+ PC+QNILGVILFIRLP+IVGQAG LT VII++ LAT LTTLSM+A+ATNG+V AGGPY I+ +NLG E
Sbjct: 142 AAPKRFGTLFGVYLPCLQNILGVILFIRLPWIVGQAGTVLTTVIIMLCVLATGLTTLSMSALATNGKVGAGGPYGILLQNLGPE 225
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: A0A8J2SMD4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMD4_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.450e-24 Identity = 53/82 (64.63%), Postives = 68/82 (82.93%), Query Frame = 1
Query: 13 RKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVEV 258
+KLGT KGVF PC+QNILG+IL++RL +I GQAG F T I+L+ +T LT LS++AIATNG+V+AGGPY++ISRNLG EV
Sbjct: 145 QKLGTFKGVFLPCLQNILGIILYLRLTWITGQAGTFGTSGIVLICACSTFLTALSLSAIATNGRVEAGGPYFVISRNLGPEV 226
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: A0A7S2EJL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EJL4_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.590e-24 Identity = 51/84 (60.71%), Postives = 67/84 (79.76%), Query Frame = 1
Query: 7 SQRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVEV 258
++ KLGT+ GVF PC+Q I+GVILF+RL I QAGV +T +II+V ++T LT LS++AIATNG + AGGPYY+ISR LGVE+
Sbjct: 99 AEGKLGTLNGVFLPCLQTIIGVILFLRLTSITAQAGVIMTTMIIIVCVISTLLTALSLSAIATNGTICAGGPYYVISRTLGVEI 182
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Match: F0YC09_AURAN (AA_permease domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC09_AURAN) HSP 1 Score: 103 bits (258), Expect = 4.710e-24 Identity = 53/85 (62.35%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 4 ASQRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKLATTLTTLSMNAIATNGQVQAGGPYYIISRNLGVEV 258
A + KLGT KGVF PC+QNILGVILF+RL +I GQAG I+L+ +T LT LS++A+ATNG+V+AGGPY++ISRNLG EV
Sbjct: 152 AGEEKLGTFKGVFLPCLQNILGVILFLRLCWITGQAGALGATGIVLICATSTFLTALSLSAVATNGKVEAGGPYFVISRNLGPEV 236 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10154.250.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10154.250.1 >prot_Ecto-sp8_S_contig10154.250.1 ID=prot_Ecto-sp8_S_contig10154.250.1|Name=mRNA_Ecto-sp8_S_contig10154.250.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=86bp QASQRKLGTVKGVFQPCVQNILGVILFIRLPFIVGQAGVFLTIVIILVAKback to top mRNA from alignment at Ecto-sp8_S_contig10154:6268..6525+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10154.250.1 ID=mRNA_Ecto-sp8_S_contig10154.250.1|Name=mRNA_Ecto-sp8_S_contig10154.250.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=258bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10154:6268..6525+ (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10154:6268..6525+ >mRNA_Ecto-sp8_S_contig10154.250.1 ID=mRNA_Ecto-sp8_S_contig10154.250.1|Name=mRNA_Ecto-sp8_S_contig10154.250.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=258bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10154:6268..6525+ (Ectocarpus species8 EcLAC_412)back to top |