mRNA_Ecto-sp8_S_contig10.9.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: D8LU46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU46_ECTSI) HSP 1 Score: 414 bits (1064), Expect = 3.850e-138 Identity = 221/290 (76.21%), Postives = 233/290 (80.34%), Query Frame = 2
Query: 497 NQCLWGFTPTTLTRSSGM-HTTKP------------------------------SGRPAQPIPSGLIVPSC-STNSQSVRCNRN-HTVPFDLPENTGSTDKWVDYTLVVSQYQKKREVRYSVNVYCTNTFRVVQTPTSPEHEQTVLGAWDQSSAGGAPGKPFFYTNPQYALVLTQPETTVHIEVRAPKDCQINATVVSKGGMRVDSVSNEREAMTTGSYRQGFCYAGGILPAGTYTVIFSTYKPGQVSLHRTVPSVNAPPRRNPRKRGTVPRGEARGQHHALPNHEGGGG 1267
NQCL GFTPTTLTRSSGM HTTKP + R A IPS PS + Q+VR +R H++ FDLPENTGSTDKWVDYTLVVSQY+KKREVRYSV+VYCTNTFRVVQTPTSPEHEQTVLGAWDQSSAGGA G PFFYTNPQYALVLTQPET VH+EVRAPKD QINATVVS+GGMRVDSVSNEREAM TGSYR GFCYAGGILPAGTYTVIFSTYKPGQVSLHRTVPSV+ PPRRNPRKRGT+PRGEARGQHHALPNHEGG G
Sbjct: 155 NQCLGGFTPTTLTRSSGMTHTTKPLRINVPSRVQVPPGVPVLRRVLPYHRYRAITVRSAPCIPSVEPTPSTIGVDDQAVRPSRTTHSIRFDLPENTGSTDKWVDYTLVVSQYEKKREVRYSVDVYCTNTFRVVQTPTSPEHEQTVLGAWDQSSAGGALGTPFFYTNPQYALVLTQPETKVHVEVRAPKDFQINATVVSQGGMRVDSVSNEREAMATGSYRMGFCYAGGILPAGTYTVIFSTYKPGQVSLHRTVPSVDTPPRRNPRKRGTLPRGEARGQHHALPNHEGGWG 444
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: D8LU44_ECTSI (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU44_ECTSI) HSP 1 Score: 278 bits (710), Expect = 3.310e-84 Identity = 134/172 (77.91%), Postives = 154/172 (89.53%), Query Frame = 2
Query: 629 QSVRCNRNHT-VPFDLPENTGSTDKWVDYTLVVSQYQKKREVRYSVNVYCTNTFRVVQTPTSPEHEQTVLGAWDQSSAGGAPGKPFFYTNPQYALVLTQPETTVHIEVRAPKDCQINATVVSKGGMRVDSVSNEREAMTTGSYRQGFCYAGGILPAGTYTVIFSTYKPGQVS 1141
+ + N HT V FDLPENTGSTDKWVDYTLVVSQY+KKREVRYSVNVYC++TF++ TPT+PEH ++++GAWDQSSAGGA G+P FYTNPQYA+VLTQ +T VHIEVRAPKD QINATVVS+GGMR+DSVS+ERE MTTGSYRQGFCYA +LPAGTYTVIFSTYKPGQV+
Sbjct: 181 KGIYTNNPHTLVRFDLPENTGSTDKWVDYTLVVSQYEKKREVRYSVNVYCSDTFKLYHTPTAPEHARSIVGAWDQSSAGGALGRPLFYTNPQYAVVLTQ-KTKVHIEVRAPKDFQINATVVSQGGMRIDSVSSEREVMTTGSYRQGFCYAENVLPAGTYTVIFSTYKPGQVA 351
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: A0A6H5KSF9_9PHAE (Calpain catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF9_9PHAE) HSP 1 Score: 225 bits (573), Expect = 5.650e-66 Identity = 126/176 (71.59%), Postives = 136/176 (77.27%), Query Frame = 1
Query: 37 DTGTRTALFDMAVNYPPQERLTLQDKGVFWVDFASVVQYFRHVFINWNPNTFRFRFVMHLRWPVEIGPKNDSFNLGDNPQLSLSVKSGATSAVSGESGSAXXXXXXXXXXXXX-----TVWVLLTRHVTAIESDPAEGDFLAMRVYADTQGKRVYFPDKPMFMGIYTNNPHTLVRY 549
DT T AV Y E L+D GVFWVDFAS+ QYF++VF+NWNP+ F FRFVMHLRWPV +GPKNDSFNLGDNPQLSLSVKS A SAVSG XXXXXXXXXXX TVWVLL+RHVT IESDPAEGDFL M VYA TQGKRVY+PD PMF GIYTNNPHTLVR+
Sbjct: 60 DTQRWTPALKEAVKYD-LETAMLKDNGVFWVDFASIFQYFKNVFMNWNPSVFSFRFVMHLRWPVNMGPKNDSFNLGDNPQLSLSVKSSAKSAVSGAXXXXXXXXXXXXXXXVARTQSPTVWVLLSRHVTVIESDPAEGDFLTMHVYAGTQGKRVYYPDTPMFKGIYTNNPHTLVRF 234
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: A0A835Z8N9_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N9_9STRA) HSP 1 Score: 161 bits (407), Expect = 6.790e-40 Identity = 101/274 (36.86%), Postives = 141/274 (51.46%), Query Frame = 1
Query: 37 DTGTRTALFDMAVNYPPQERLTLQDKGVFWVDFASVVQYFRHVFINWNPNTFRFRFVMHLRWPVEIGPKNDSFNLGDNPQLSLSVKSGATSAVSGESGSAXXXXXXXXXXXXXTVWVLLTRHVTAIESDPAEGDFLAMRVYADTQGKRVYFPDKPMFMGIYTNNPHTLVRYAYNQAIRPSRT-------------THSIRFDRAI----M*HQQSVSQV*P*PHRAVRLAGEYGLHGQVGRLHARGQSVPEEEGSQVFRERVLHEHLQGRPNAY 807
DT TA AV Y L+D GVFW+D+ S+ ++F++VFINWNP F++R V+H WPV GP D++NLG NPQ +L+V G SA S SA VWVLL+RHV +E+D A GD+L + V+ ++ G RV++P PM+ G YTNNPHTLVR+ + PS+T T +R+ + + Q + P PHR R+ G +G GRL + + + VLH L+ P Y
Sbjct: 123 DTARWTAAMKRAVGYD-LAAAQLEDNGVFWIDWPSICRFFKNVFINWNPALFKYRSVLHGEWPVTQGPPMDTYNLGLNPQYTLTVPYGNASA----SASAKPPI----------VWVLLSRHVMELETDEASGDYLTLHVFDNSDGARVWYPSTPMYKGTYTNNPHTLVRFDLPERSSPSQTQRQYTLVLSQYKKTRDVRYTLNVYCSALFELQPTPE--PPPHRQ-RVQGSWGPGNAGGRLGSARYHTNPQYAITLTTAAVLHVQLEA-PKEY 377
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: A0A6H5KS09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS09_9PHAE) HSP 1 Score: 139 bits (349), Expect = 1.050e-35 Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 3
Query: 1134 RYLFTVPSRASMLLRVVIPENAGPFPEGRPAVNITLFPTTREGGADGTAGPPEDSGGMHLRGVGRISLNPKCQPTSNLA 1370
RYLFTVPSRAS+LLRVVIPENAGPFPEGRPAVNITLFPTTREG + ++GPPED+GGM RGVGRISLNPKCQPTSNLA
Sbjct: 18 RYLFTVPSRASILLRVVIPENAGPFPEGRPAVNITLFPTTREGAGNSSSGPPEDTGGMP-RGVGRISLNPKCQPTSNLA 95
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: A0A7S2R4L7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4L7_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.240e-32 Identity = 68/147 (46.26%), Postives = 92/147 (62.59%), Query Frame = 1
Query: 109 DKGVFWVDFASVVQYFRHVFINWNPNTFRFRFVMHLRWPVEIGPKNDSFNLGDNPQLSLSVKSGATSAVSGESGSAXXXXXXXXXXXXXTVWVLLTRHVTAIESDPAEGDFLAMRVYADTQGKRVYFPDKPMFMGIYTNNPHTLVRY 549
D GVFW+DF S+ +YFR +NWNPN F+ R V+H WP+ +GPKND + G NPQ ++ V +A + +G+ TVWVLL+RHVT E D GDFL + V+ + QGKRV++P PM G+YTNNPH L+R+
Sbjct: 391 DNGVFWIDFTSMRRYFRSTHLNWNPNLFQHRKVLHYHWPLAVGPKNDQYTYGSNPQWTVVVDL-PPAASTNSTGTPISKSSVSP-----TVWVLLSRHVTKKEDDEHPGDFLTVHVF-ENQGKRVFYPHAPMVKGVYTNNPHNLLRF 530
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: A0A7R9YFX4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFX4_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.790e-32 Identity = 70/184 (38.04%), Postives = 100/184 (54.35%), Query Frame = 1
Query: 73 VNYPPQERLTLQDKGVFWVDFASVVQYFRHVFINWNPNTFRFRFVMHLRWPVEI-GPKNDSFNLGDNPQLSLSVKSGATSAVSGESGSAXXXXXXXXXXXXXTVWVLLTRHVTAIES---DPAEGDFLAMRVYADTQGKRVYFPDKPMFMGIYTNNPHTLVRYAYNQAIRPSRTTHSIRFDRAI 612
+ Y P L G+FWVDF +V YF V +NWNPN F+ + V H WP GP+ND FN+G+NPQ +L V G T VW+LL+RHVT E+ D +EGDFLA+ VY +G R+++P+K + G+Y+NNPH L R+ ++ P+ + S + R +
Sbjct: 265 LQYQPDIARQLDRMGIFWVDFETVQHYFNSVHLNWNPNLFQHQAVTHANWPTTSKGPRNDQFNVGENPQFTLEVTRGGT------------------------VWILLSRHVTKREAEIKDESEGDFLALHVYTKRKGARIFYPEKAVIRGLYSNNPHNLTRFDADELTYPADESRSQQGRRKL 424
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: A0A7S2DIE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DIE1_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.300e-31 Identity = 61/162 (37.65%), Postives = 94/162 (58.02%), Query Frame = 1
Query: 88 QERLTLQDKGVFWVDFASVVQYFRHVFINWNPNTFRFRFVMHLRWPVEIGPKNDSFNLGDNPQLSLSVKSGATSAVSGESGSAXXXXXXXXXXXXXTVWVLLTRHVTAIESDPAEGDFLAMRVYADTQGKRVYFPDKPMFMGIYTNNPHTLVRYAYNQAIRP 573
Q+ + D G+FW+D SVV++F +NWNP F+ R ++H WPV +GPK+D +NLG NPQ ++ V +S+ G+ + +VW+LL+RH T + + DFL + VY + +RVY+PD + G+YTN+PHTL+R+ RP
Sbjct: 86 QQVASQYDNGIFWIDMPSVVRFFDTAHLNWNPGLFKHRSMLHAHWPVSMGPKSDLYNLGSNPQYTIMVT--LSSSSDGKKKNTQLTGVPSTTAQSPSVWILLSRHSTTKDPEGVRPDFLTVHVYESS--RRVYYPDGALIRGVYTNSPHTLLRFDVPPTTRP 243
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: A0A7S1UDV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDV7_9STRA) HSP 1 Score: 136 bits (342), Expect = 7.680e-31 Identity = 74/183 (40.44%), Postives = 98/183 (53.55%), Query Frame = 1
Query: 70 AVNYPPQERLTLQDKGVFWVDFASVVQYFRHVFINWNPNTFRFRFVMHLRWPVE-IGPKNDSFNLGDNPQLSLSVKSGATSAVSGESGSAXXXXXXXXXXXXXTVWVLLTRHVTAIESD---PAEGDFLAMRVYADTQGKRVYFPDKPMFMGIYTNNPHTLVRY--------AYNQAIRPSRT 582
A+N+ P L GVFWVDF +V +YF + +NWNP F + H WPV GP+ND +N+G+NPQ +L V GAT VW+LL+RHVT E D +GDFL++ VYA G+R+++PD+P G Y+NNPH L R+ NQA PSRT
Sbjct: 355 ALNFEPDMARQLDQMGVFWVDFETVQRYFSSIHLNWNPALFANQATTHAHWPVSSAGPRNDRYNVGENPQFTLEVMRGAT------------------------VWILLSRHVTKREKDIQSEDDGDFLSLHVYAHRGGRRIFYPDQPAVKGYYSNNPHNLTRFDVDGLPPDGENQA--PSRT 511
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Match: A0A6H5L7W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W5_9PHAE) HSP 1 Score: 123 bits (308), Expect = 1.530e-30 Identity = 57/60 (95.00%), Postives = 58/60 (96.67%), Query Frame = 3
Query: 1191 ENAGPFPEGRPAVNITLFPTTREGGADGTAGPPEDSGGMHLRGVGRISLNPKCQPTSNLA 1370
ENAGPFPEGRPAVNI LFPTTREGGADGTAGPPED+GGMHLRGVGRISLNPKCQPT NLA
Sbjct: 7 ENAGPFPEGRPAVNIALFPTTREGGADGTAGPPEDTGGMHLRGVGRISLNPKCQPTCNLA 66 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10.9.1 >prot_Ecto-sp8_S_contig10.9.1 ID=prot_Ecto-sp8_S_contig10.9.1|Name=mRNA_Ecto-sp8_S_contig10.9.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=206bp MARSLLQHISPLDTGTRTALFDMAVNYPPQERLTLQDKGVFWVDFASVVQback to top mRNA from alignment at Ecto-sp8_S_contig10:36478..44983- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10.9.1 ID=mRNA_Ecto-sp8_S_contig10.9.1|Name=mRNA_Ecto-sp8_S_contig10.9.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=8506bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10:36478..44983- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10:36478..44983- >mRNA_Ecto-sp8_S_contig10.9.1 ID=mRNA_Ecto-sp8_S_contig10.9.1|Name=mRNA_Ecto-sp8_S_contig10.9.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=618bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10:36478..44983- (Ectocarpus species8 EcLAC_412)back to top |