mRNA_Ecto-sp8_S_contig10.8.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig10.8.1
Unique NamemRNA_Ecto-sp8_S_contig10.8.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: D8LU47_ECTSI (T-complex protein 1 subunit gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU47_ECTSI)

HSP 1 Score: 1040 bits (2690), Expect = 0.000e+0
Identity = 531/531 (100.00%), Postives = 531/531 (100.00%), Query Frame = 2 
Query:   17 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIKHGQKQG 1609
            MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIKHGQKQG
Sbjct:    1 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIKHGQKQG 531
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: A0A836CR16_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR16_9STRA)

HSP 1 Score: 833 bits (2151), Expect = 3.450e-295
Identity = 419/539 (77.74%), Postives = 466/539 (86.46%), Query Frame = 2 
Query:   26 PVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKC-----------------TWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIK 1591
            PVMVLP+NTKRETGR AQLGNI+AAKAV++IIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML+ AEP+L + +HPTQIV GYA ALQ AL+ C A+++ +D+ +   LK+LV+AAVGTKFSHRWGD LV MAIDAV +V   VDGR EVDVKRY RVEK+PGGE++ C VLDGVMFNKDVTH++MRRRIE+PR+LLLDCPLEYKKGES TNVEVT+E+DWNTLLRMEEEY+ENICAQIVAF PDIVITEKGVSDLAQHY MKA+IT FRRLRK+DNNR+ARAVGAT+VSRPDEIQESDIGTGCGLFEVRKIGDEYF FLE CKD KACTVLLRGGSKDVLNEVERNL DAMQVVRNVVFEPRLLPGGGATEMAV+ AL++ A+  +G Q+W   A A A E IPRTLAQNCGA+VVR LTQLRAKHA  A                   TWGI+G TG + DM  LG+WEP++VK QTYKTA+EAACMILRIDDIVSG+K
Sbjct:    5 PVMVLPINTKRETGRTAQLGNISAAKAVSEIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAAAEPLLLQHLHPTQIVRGYAHALQVALETCTAVSKVVDLKDRAALKELVEAAVGTKFSHRWGDILVGMAIDAVTKVVCDVDGRTEVDVKRYVRVEKVPGGELDQCRVLDGVMFNKDVTHARMRRRIESPRILLLDCPLEYKKGESATNVEVTQEDDWNTLLRMEEEYVENICAQIVAFKPDIVITEKGVSDLAQHYFMKANITCFRRLRKSDNNRVARAVGATIVSRPDEIQESDIGTGCGLFEVRKIGDEYFAFLEQCKDPKACTVLLRGGSKDVLNEVERNLQDAMQVVRNVVFEPRLLPGGGATEMAVAAALTRAAEAADGAQRWPVAAVAGAFEAIPRTLAQNCGASVVRTLTQLRAKHAAPAAXXXXXXXXXXXXXAHTGVTWGINGVTGELADMDTLGVWEPYSVKVQTYKTAIEAACMILRIDDIVSGVK 543
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: A0A7S2SP58_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP58_9STRA)

HSP 1 Score: 814 bits (2103), Expect = 3.760e-288
Identity = 405/530 (76.42%), Postives = 461/530 (86.98%), Query Frame = 2 
Query:   17 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRV--RTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKA-QEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIKHG 1597
            M APVMVL   TKRETGR+AQLGNI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVI+LTGE L +AEP + R VHPT IV G+ RALQ +L+ C  +A  +D+++  Q+  +V +++GTKFS RWG +++ MA+ AV RV       G+ EVD+KRY + EK+PGGE+ DC VLDGVMFNKDVTH+KMRRRIENPR+LLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA  PDIVITEKGVSDLAQHYL+KA+ITAFRRLRKTDNNR+ARA GAT+VSRPDEIQESD+GTGCGLFEV+KIGDEYFTFL  C+D KACTVLLRGGSKDVLNE+ERNL+DAMQV+RNVVFEP LLPGGGATEMAV QAL++ A  +VEGVQQW F A   ALEVIPRTLAQNCGANVVRV+TQLRAKH +    TWGIDG TG + DM+D+G+WEP+ VK QT KT++EAACMILRIDDIVSG+K G
Sbjct:    1 MQAPVMVLNTTTKRETGRSAQLGNIAAAKAVADIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIVLTGETLLLAEPFIVRNVHPTVIVSGFTRALQHSLEVCKRVAVKVDLEDRAQMMSIVQSSIGTKFSARWGAQMIDMALTAVLRVVHEDGGSGQKEVDIKRYVKTEKLPGGELSDCQVLDGVMFNKDVTHAKMRRRIENPRILLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENLCAQIVAVRPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARACGATIVSRPDEIQESDVGTGCGLFEVKKIGDEYFTFLTQCQDPKACTVLLRGGSKDVLNEIERNLSDAMQVIRNVVFEPLLLPGGGATEMAVGQALARDAASKVEGVQQWPFAAIGKALEVIPRTLAQNCGANVVRVMTQLRAKHTSLDSSTWGIDGATGKLADMKDMGLWEPYNVKVQTLKTSIEAACMILRIDDIVSGMKKG 530
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: A0A7S2FP00_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FP00_9STRA)

HSP 1 Score: 815 bits (2106), Expect = 3.870e-288
Identity = 405/528 (76.70%), Postives = 461/528 (87.31%), Query Frame = 2 
Query:   17 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRV-RTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIKHG 1597
            M APVMVL  NTKRETGR AQLGNI AAKAV+DIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL+GE+L +AEP L R +HPT IV GY +ALQ AL  C  +A  +D+D+  Q+  +V + +GTKFS R+GD++V++A+ AV++V +   DG+ EVD+KRY + EKIPGGE+ DC VL+GVMFNKDVTH+KMRRRIENPRVLLLDCPLEYKKGESQTNVE+TKEEDW+TLLRMEEEYIEN+CAQIVA  PDIVITEKGVSDLAQHYL+KA+ITAFRRLRKTDNNR+ARA GAT+VSRPDEIQESD+GTGCGLFEVRKIGDEYF F+E C D KACTVLLRGGSKDVLNE+ERNL DAMQV+RNVVFEP LLPGGGATEMAV QAL++ +  +EGV+QW + AA  ALEVIPRTLA+NCGANV+RV+TQLR KH      TWGIDGTTG + DM+DLG+WEPF VK QT KTA+EAACMILRIDDIVSG+  G
Sbjct:   30 MQAPVMVLNTNTKRETGRTAQLGNIMAAKAVSDIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILSGEILCLAEPFLMRNIHPTVIVSGYNKALQEALVVCKQMAVPVDLDDTKQMTDIVRSTIGTKFSSRFGDQMVNLALTAVRKVVKEGADGKKEVDIKRYVKTEKIPGGELSDCCVLNGVMFNKDVTHAKMRRRIENPRVLLLDCPLEYKKGESQTNVEITKEEDWDTLLRMEEEYIENMCAQIVAVKPDIVITEKGVSDLAQHYLLKANITAFRRLRKTDNNRVARATGATIVSRPDEIQESDVGTGCGLFEVRKIGDEYFVFMEECADPKACTVLLRGGSKDVLNEIERNLGDAMQVIRNVVFEPLLLPGGGATEMAVGQALARSSVGLEGVEQWPYVAAGKALEVIPRTLAENCGANVIRVMTQLRTKHLTLDNATWGIDGTTGKLADMQDLGLWEPFVVKVQTLKTAMEAACMILRIDDIVSGMAKG 557
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: W7TWK9_9STRA (T-complex protein 1 subunit gamma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWK9_9STRA)

HSP 1 Score: 796 bits (2057), Expect = 4.110e-281
Identity = 401/532 (75.38%), Postives = 455/532 (85.53%), Query Frame = 2 
Query:   17 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGR-------VEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIK 1591
            M+APVMVL  NTKRETGR AQLGNI AAKAV+DI+RTTLGPR+MLKMLLDPMGGIVITNDG+CILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML+ AEP L R +HPTQIV GY++ALQ AL  C+ALA+ IDV++   L ++V A VGTKFS RWG  +V +A+D+V +V   V G         E DVKRY RVEKIPGGE+ D  V+DGVMFNKDVTHSKMRRRIE PR+LLLDCPLEYKKGESQTNVEV +EEDWNTLLRMEEE+IE +CA+IVAF PDIVITEKGVSDLAQHYL+KA +TAFRR+RK+DNNRIARAVGA +VSRPDEIQE D+GTGCGLFEVRKIGDEYF FLE C+  +ACTVLLRGGSKDVLNEVERNL DA+QVVRN+VFE +LLPGGGATEMAV QAL++ + EVEGVQQW +KA   ALEVIPRTLAQNCG NV+R++TQLRAKHA +   TWGIDG  G++  M  LG+WEP+ VK QT KTAVEAACM+LRIDD+VSG+K
Sbjct:    2 MNAPVMVLNANTKRETGRTAQLGNIAAAKAVSDIVRTTLGPRAMLKMLLDPMGGIVITNDGHCILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLAQAEPFLHRNIHPTQIVAGYSKALQEALKVCNALAKPIDVNDKQALSQIVSACVGTKFSSRWGPFMVDLAVDSVLKVVRQVGGEGGAEGGYKECDVKRYVRVEKIPGGELGDSKVIDGVMFNKDVTHSKMRRRIEKPRILLLDCPLEYKKGESQTNVEVKQEEDWNTLLRMEEEFIEKMCAEIVAFRPDIVITEKGVSDLAQHYLLKAGVTAFRRVRKSDNNRIARAVGAVIVSRPDEIQEGDVGTGCGLFEVRKIGDEYFAFLEQCEQPQACTVLLRGGSKDVLNEVERNLQDALQVVRNLVFESKLLPGGGATEMAVGQALARASTEVEGVQQWPYKAVGEALEVIPRTLAQNCGTNVLRIMTQLRAKHA-QGPTTWGIDGEKGILVPMETLGVWEPYAVKVQTIKTAVEAACMLLRIDDVVSGMK 532
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: A0A6S9KVF4_HETAK (T-complex protein 1 subunit gamma n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9KVF4_HETAK)

HSP 1 Score: 795 bits (2054), Expect = 9.040e-281
Identity = 396/525 (75.43%), Postives = 446/525 (84.95%), Query Frame = 2 
Query:   17 MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIK 1591
            M APVMVL  NT+RE GR+AQL NI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDGNCILRE+DV HPAAKSMIELSRAQDEEVGDGTTSVIIL GEML++AEP L++ +HPT IV GY RA+  ALD C  +A  +DV++  Q+ +LV+A +GTKFS RW  KLV MAIDAV +V    DGR EVD+KRY RVEKIPGGEM DC VLDGVMFNKD+TH KMR+ IENPRV+LLDC LEYKKGESQTNVE+TKEEDWNTLLRMEEEYIENICAQIVA  PD+VITEKGVSDLAQHY +KA ITAFRRLRK+DNNR+ARA GAT+VSR +E++E DIGTGCG FE+RK+GDE+F F E C +AKACT+LLRGGSKDVLNEVERNL DAMQVVRN+V+EPRLLPGGGATEMAV+  L K A  VEG  ++ F A   ALEVIPRTLAQNCGANVVR LTQLRAKH +    TWG+DG TG + DMR+ G+WEPF VK QT+KTAVEA CM+LRIDDIVSG+K
Sbjct:    1 MQAPVMVLNTNTQREHGRSAQLSNIQAAKAVADIIRTTLGPRSMLKMLLDPMGGIVMTNDGNCILREIDVTHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLALAEPFLSQDIHPTVIVQGYMRAMTLALDVCKEIAMDVDVNDRAQMTQLVEATLGTKFSSRWSSKLVGMAIDAVLKVVKDDDGRKEVDIKRYCRVEKIPGGEMGDCRVLDGVMFNKDITHPKMRKSIENPRVMLLDCSLEYKKGESQTNVEITKEEDWNTLLRMEEEYIENICAQIVALRPDVVITEKGVSDLAQHYFVKAGITAFRRLRKSDNNRVARATGATIVSRTEELREEDIGTGCGRFEMRKVGDEWFAFFEACAEAKACTLLLRGGSKDVLNEVERNLQDAMQVVRNIVYEPRLLPGGGATEMAVAYELGKAALAVEGPARFPFAAVGQALEVIPRTLAQNCGANVVRALTQLRAKHTDPGNRTWGVDGETGAVRDMREAGVWEPFAVKVQTFKTAVEAGCMVLRIDDIVSGMK 525
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: A0A7R9U7E4_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7E4_9STRA)

HSP 1 Score: 786 bits (2030), Expect = 1.190e-276
Identity = 388/526 (73.76%), Postives = 456/526 (86.69%), Query Frame = 2 
Query:   14 TMSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIK 1591
            TM  P+MV+ VNT+RETGRAAQLGNI AAKAVADIIRTTLGPRSMLKMLLDPMGGIV+TNDG+ ILREVDV+HPAAKSMIELSRAQDEEVGDGTTSVIIL GEMLS+AEP L R +HPT +V GY RALQ AL+ C  +A+ +D+++   +++LV  AVGT FS R+G+ ++ +A+DAV+RV T    R EVD+KRYA+VEKIPGGE+ DC VL+GVMFNK  TH+KMRRRIENPR+LL DCPLEYKKGESQ NVE+T EED+ ++LRMEEEYIEN+C+ I+A  PDIV+TEKGVSDLAQHYL KA ITAFRRLRKTDNNRIARAVGAT+V RP+E++ESD+GTGCGLFEVRKIGDEYFTFLE CKDAKACT++LRGGSKDVLNEVERNL DAMQVVRN+VFEP+LLPGGGATEM +++ALS++A  VEGV QW F+A   ALEVIPRTLAQN GANV+R +T+LRAKHA+    T+GI G TG + DM + GIW+P++VK QT+KTA+E+ACMILRIDDIVSG K
Sbjct:   28 TMQTPMMVMNVNTQRETGRAAQLGNIQAAKAVADIIRTTLGPRSMLKMLLDPMGGIVLTNDGHAILREVDVSHPAAKSMIELSRAQDEEVGDGTTSVIILAGEMLSMAEPFLERNIHPTLVVKGYTRALQVALNTCKEIAKHVDIEDTASIQELVKTAVGTTFSSRFGNIVIGLAVDAVRRVVTYSGDRPEVDIKRYAKVEKIPGGEIADCAVLNGVMFNKVPTHAKMRRRIENPRILLFDCPLEYKKGESQANVEITNEEDFESMLRMEEEYIENLCSHIIALRPDIVVTEKGVSDLAQHYLTKAGITAFRRLRKTDNNRIARAVGATIVHRPEEVRESDLGTGCGLFEVRKIGDEYFTFLEECKDAKACTIMLRGGSKDVLNEVERNLQDAMQVVRNIVFEPKLLPGGGATEMCIAEALSREASNVEGVDQWPFQAVGQALEVIPRTLAQNAGANVIRSITELRAKHASGGCRTYGIHGHTGRIADMAEEGIWDPYSVKVQTFKTAIESACMILRIDDIVSGTK 553
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: A0A7S2XKF7_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKF7_9STRA)

HSP 1 Score: 760 bits (1963), Expect = 1.450e-266
Identity = 386/547 (70.57%), Postives = 447/547 (81.72%), Query Frame = 2 
Query:   29 VMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRV-------------RTVVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHA---NEAK---------CTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIKH 1594
            VMVL  NTKRETGR AQ+GNI AA+AVADIIRTTLGPRSMLKMLLDPMGG+VITNDGNCILREVDV+HP AKSMIELSR+QDEEVGDGTTSVIIL GE++  A P +   +HPT IV GY +ALQ AL  C+  A  ID+++   +KKLV++ +GTKFS RW DK+V MAI AV  V              T  + ++EVD+KRYA+VEKIPGGE+ D  VL GVMFNKDVTHSKMRR+IENPR+LLLD PLEYKKGESQTNVE+T EEDWNT+L+MEEEY+EN+C +I+AF PDIVITEKGVSDLAQH+  KA+ITAFRRLRKTDNNR+ARA GAT+VSR DEIQESDIGT CGLFE+RKIGDEYF FLE CKD KACT++LRGGSKDVLNE+ERNL+DAMQVVRNV+F+P+LLPGGGATEMAV+  L +  Q+VEGVQQ  F A   A+EVIPRTLAQNCG +V+R +TQLRAKHA   +EA+         C WGI+G TG + DM +LGIWEPF+VK QT KTA+E+ACMILRIDDIVSG K 
Sbjct:    7 VMVLNQNTKRETGRQAQIGNIAAARAVADIIRTTLGPRSMLKMLLDPMGGVVITNDGNCILREVDVSHPTAKSMIELSRSQDEEVGDGTTSVIILAGEVMMKAGPFINNNLHPTVIVQGYNKALQEALLICERQALVIDINDTVLMKKLVESCIGTKFSSRWNDKMVDMAIAAVLTVARPSSNSPETSTAHTPYNHKMEVDIKRYAKVEKIPGGEISDSCVLKGVMFNKDVTHSKMRRKIENPRILLLDSPLEYKKGESQTNVEITDEEDWNTMLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHFFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIQESDIGTNCGLFEMRKIGDEYFAFLEECKDPKACTIMLRGGSKDVLNEIERNLSDAMQVVRNVIFDPKLLPGGGATEMAVATGLRRAGQKVEGVQQGPFMAVGEAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYDEAEKSTDEKTKPCNWGINGITGDLVDMEELGIWEPFSVKVQTIKTAIESACMILRIDDIVSGSKR 553
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: A0A7S3VCB2_9STRA (T-complex protein 1 subunit gamma n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCB2_9STRA)

HSP 1 Score: 757 bits (1955), Expect = 2.630e-265
Identity = 385/550 (70.00%), Postives = 449/550 (81.64%), Query Frame = 2 
Query:   26 PVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAV---KRVRTVVDGR-----VEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANEAKCTW----------------GIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIKHGQK 1603
            PVMVL   T+R+TGR AQL NI AA+AVAD+IRTTLGPRSMLKMLLDPMGGIVITNDGNCILRE+DV+ P AKSMIELSRAQDEEVGDGTTSVIIL GEML +AEP++T  +HPT IV GY RALQ ALD C+ +A+ +DV+N  Q+K++V++ +GTKFS+RW DK+V MA+ AV    R +T   G      +EVD+KRYA+VEKIPGGE+ D  VL GVMFNKD THSKMRRRIENPR+LLLDCPLEYKKGESQTNVE+T  +DWNT+LRMEEEY+EN+C +I+AF PDIVITEKGVSDLAQHYL KA+ITAFRRLRKTDNNRIARA GAT+VSR DEIQESDIG GCGLF + KIGDE+F FL+ CKD KACT++LRGGSKDVLNE+ERNL DAM+VVRNVV++P+LLPGGGATEMAV+  + +   +VEGVQQ  F A   A+EVIPRTLAQNCG +V+R +TQLRAKHA  A   W                GI+GTTGV+  M +LGIWEPF+VK QT KTA+E+ACMILRIDDIVSG K  Q+
Sbjct:    9 PVMVLNNKTQRQTGREAQLSNINAARAVADVIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREIDVSQPTAKSMIELSRAQDEEVGDGTTSVIILAGEMLILAEPLITEMLHPTVIVQGYTRALQEALDICERMAKVVDVENEVQMKEIVNSCIGTKFSNRWNDKMVEMALQAVLTVARSKTPGSGTKSGQTMEVDIKRYAKVEKIPGGEIADSVVLKGVMFNKDTTHSKMRRRIENPRILLLDCPLEYKKGESQTNVEITNTDDWNTMLRMEEEYVENMCMEIIAFQPDIVITEKGVSDLAQHYLAKANITAFRRLRKTDNNRIARATGATIVSRTDEIQESDIGNGCGLFHMDKIGDEWFCFLDECKDPKACTIVLRGGSKDVLNEIERNLHDAMEVVRNVVYDPKLLPGGGATEMAVAMGIRRAGLKVEGVQQRPFLAVGEAMEVIPRTLAQNCGVSVIRTVTQLRAKHA-AAYDEWEKNSKESGVVPPASDFGINGTTGVLVSMEELGIWEPFSVKVQTIKTAIESACMILRIDDIVSGSKKSQR 557
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma n=3 Tax=Thalassiosiraceae TaxID=29202 RepID=TCPG_THAWE)

HSP 1 Score: 757 bits (1954), Expect = 3.860e-265
Identity = 387/547 (70.75%), Postives = 438/547 (80.07%), Query Frame = 2 
Query:   26 PVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILTGEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQLKKLVDAAVGTKFSHRWGDKLVSMAIDAVKRV----RT---------VVDGRVEVDVKRYARVEKIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGESQTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQHYLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEVRKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVVFEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLAQNCGANVVRVLTQLRAKHANE------------AKCTWGIDGTTGVMTDMRDLGIWEPFTVKTQTYKTAVEAACMILRIDDIVSGIK 1591
            P+MVL   T+R TGR AQLGNI AA+AVADIIR+TLGPRSMLKMLLDPMGGIVITNDGNCILREVDV+HP AKSMIELSRA DEEVGDGTTSVIIL GEML  AEP +   +HPT IV GY  ALQ AL  C+  A  +DV +  ++K LV + +G KFS RW D ++ MA+ AV  V    RT         V   ++EVD+KRYA+VEKIPGGE+ DC VL GVMFNKDVTHSKMRRRIENPR+LLLD PLEYKKGESQTNVE+T EEDWNTLL+MEEEY+EN+C +I+AF PDIVITEKGVSDLAQHY  KA+ITAFRRLRKTDNNR+ARA GAT+VSR DEI+ESDIGTGCGLFE+RKIG+EYF F E CKD KACT++LRGGSKDVLNE+ERNL DAMQVVRNVVF+PRLLPGGGATEMAVS  L K   ++EG+QQ  F A   A+EVIPRTLAQNCG +V+R +TQLRAKHA               KC WGIDGTTG + DM + G+WEPF+VK QT KTAVE+ACMILRIDDIVSG K
Sbjct:    8 PIMVLNSKTQRSTGRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSERVKSLVQSCIGAKFSSRWNDIMIDMALKAVLTVSRESRTPSFTPEANDVYAQKMEVDIKRYAKVEKIPGGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIRESDIGTGCGLFEMRKIGEEYFAFFEECKDPKACTIILRGGSKDVLNEIERNLTDAMQVVRNVVFDPRLLPGGGATEMAVSVGLRKAGLKLEGIQQGPFLAVGDAMEVIPRTLAQNCGVSVIRTVTQLRAKHAAAYEDSETSGNGTFPKCNWGIDGTTGKLVDMEEFGVWEPFSVKVQTIKTAVESACMILRIDDIVSGSK 554
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU47_ECTSI0.000e+0100.00T-complex protein 1 subunit gamma n=1 Tax=Ectocarp... [more]
A0A836CR16_9STRA3.450e-29577.74T-complex protein 1 subunit gamma n=1 Tax=Tribonem... [more]
A0A7S2SP58_9STRA3.760e-28876.42T-complex protein 1 subunit gamma n=1 Tax=Rhizochr... [more]
A0A7S2FP00_9STRA3.870e-28876.70T-complex protein 1 subunit gamma n=1 Tax=Florenci... [more]
W7TWK9_9STRA4.110e-28175.38T-complex protein 1 subunit gamma n=2 Tax=Monodops... [more]
A0A6S9KVF4_HETAK9.040e-28175.43T-complex protein 1 subunit gamma n=1 Tax=Heterosi... [more]
A0A7R9U7E4_9STRA1.190e-27673.76T-complex protein 1 subunit gamma n=1 Tax=Pinguioc... [more]
A0A7S2XKF7_9STRA1.450e-26670.57T-complex protein 1 subunit gamma n=1 Tax=Attheya ... [more]
A0A7S3VCB2_9STRA2.630e-26570.00T-complex protein 1 subunit gamma n=1 Tax=Chaetoce... [more]
TCPG_THAWE3.860e-26570.75T-complex protein 1 subunit gamma n=3 Tax=Thalassi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10contigEcto-sp8_S_contig10:24640..35944 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score1043.5
Seed ortholog evalue3.4e-302
Seed eggNOG ortholog2880.D8LU47
Preferred nameCCT3
Model size2654
KEGG koko:K09495
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0001101,GO:0002199,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005832,GO:0005856,GO:0005874,GO:0005886,GO:0005975,GO:0006457,GO:0006458,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006884,GO:0007154,GO:0007165,GO:0007166,GO:0007338,GO:0007339,GO:0008037,GO:0008150,GO:0008152,GO:0008361,GO:0009311,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009751,GO:0009826,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0009988,GO:0009992,GO:0010033,GO:0010556,GO:0010557,GO:0010604,GO:0010638,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016049,GO:0016301,GO:0016310,GO:0016462,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019219,GO:0019222,GO:0019538,GO:0019725,GO:0019953,GO:0022414,GO:0022607,GO:0023052,GO:0030104,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031647,GO:0032204,GO:0032206,GO:0032210,GO:0032212,GO:0032502,GO:0032535,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033043,GO:0033044,GO:0035036,GO:0036211,GO:0040007,GO:0042221,GO:0042493,GO:0042592,GO:0042623,GO:0043170,GO:0043209,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043933,GO:0044085,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045935,GO:0046677,GO:0046931,GO:0048518,GO:0048522,GO:0048589,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051052,GO:0051054,GO:0051082,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051704,GO:0051716,GO:0055082,GO:0060255,GO:0060341,GO:0060560,GO:0061077,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070202,GO:0070203,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0101031,GO:0140096,GO:1901564,GO:1901700,GO:1901998,GO:1903827,GO:1903829,GO:1904356,GO:1904358,GO:1904814,GO:1904816,GO:1904851,GO:1904951,GO:2000112,GO:2000278,GO:2000573,GO:2001252
Exons14
EggNOG free text desc.unfolded protein binding
EggNOG OGsCOG0459@1,KOG0364@2759
Ec32 ortholog descriptionT-complex protein 1, gamma subunit
Ec32 orthologEc-16_000190.1
Cds size1596
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko03110,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10.8.1prot_Ecto-sp8_S_contig10.8.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig10 24656..34902 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143096.4911935-UTR-Ecto-sp8_S_contig10:24639..246551681143096.4911935-UTR-Ecto-sp8_S_contig10:24639..24655Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10 24640..24655 +
1681143096.6431885-UTR-Ecto-sp8_S_contig10:34902..359441681143096.6431885-UTR-Ecto-sp8_S_contig10:34902..35944Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig10 34903..35944 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681143096.5101125-CDS-Ecto-sp8_S_contig10:24655..247801681143096.5101125-CDS-Ecto-sp8_S_contig10:24655..24780Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 24656..24780 +
1681143096.5196486-CDS-Ecto-sp8_S_contig10:25818..258941681143096.5196486-CDS-Ecto-sp8_S_contig10:25818..25894Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 25819..25894 +
1681143096.528727-CDS-Ecto-sp8_S_contig10:26382..264791681143096.528727-CDS-Ecto-sp8_S_contig10:26382..26479Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 26383..26479 +
1681143096.537632-CDS-Ecto-sp8_S_contig10:26819..268781681143096.537632-CDS-Ecto-sp8_S_contig10:26819..26878Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 26820..26878 +
1681143096.5467315-CDS-Ecto-sp8_S_contig10:27655..277921681143096.5467315-CDS-Ecto-sp8_S_contig10:27655..27792Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 27656..27792 +
1681143096.5556056-CDS-Ecto-sp8_S_contig10:28017..281561681143096.5556056-CDS-Ecto-sp8_S_contig10:28017..28156Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 28018..28156 +
1681143096.5646045-CDS-Ecto-sp8_S_contig10:28738..288521681143096.5646045-CDS-Ecto-sp8_S_contig10:28738..28852Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 28739..28852 +
1681143096.5730362-CDS-Ecto-sp8_S_contig10:29254..294311681143096.5730362-CDS-Ecto-sp8_S_contig10:29254..29431Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 29255..29431 +
1681143096.581485-CDS-Ecto-sp8_S_contig10:30671..308141681143096.581485-CDS-Ecto-sp8_S_contig10:30671..30814Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 30672..30814 +
1681143096.5901697-CDS-Ecto-sp8_S_contig10:31002..311171681143096.5901697-CDS-Ecto-sp8_S_contig10:31002..31117Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 31003..31117 +
1681143096.5991251-CDS-Ecto-sp8_S_contig10:32158..322511681143096.5991251-CDS-Ecto-sp8_S_contig10:32158..32251Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 32159..32251 +
1681143096.608475-CDS-Ecto-sp8_S_contig10:33299..334191681143096.608475-CDS-Ecto-sp8_S_contig10:33299..33419Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 33300..33419 +
1681143096.6180155-CDS-Ecto-sp8_S_contig10:34024..341561681143096.6180155-CDS-Ecto-sp8_S_contig10:34024..34156Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 34025..34156 +
1681143096.627461-CDS-Ecto-sp8_S_contig10:34833..349021681143096.627461-CDS-Ecto-sp8_S_contig10:34833..34902Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig10 34834..34902 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig10.8.1

>prot_Ecto-sp8_S_contig10.8.1 ID=prot_Ecto-sp8_S_contig10.8.1|Name=mRNA_Ecto-sp8_S_contig10.8.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=532bp
MSAPVMVLPVNTKRETGRAAQLGNITAAKAVADIIRTTLGPRSMLKMLLD
PMGGIVITNDGNCILREVDVAHPAAKSMIELSRAQDEEVGDGTTSVIILT
GEMLSVAEPILTRGVHPTQIVMGYARALQTALDACDALAETIDVDNGPQL
KKLVDAAVGTKFSHRWGDKLVSMAIDAVKRVRTVVDGRVEVDVKRYARVE
KIPGGEMEDCTVLDGVMFNKDVTHSKMRRRIENPRVLLLDCPLEYKKGES
QTNVEVTKEEDWNTLLRMEEEYIENICAQIVAFHPDIVITEKGVSDLAQH
YLMKADITAFRRLRKTDNNRIARAVGATVVSRPDEIQESDIGTGCGLFEV
RKIGDEYFTFLEGCKDAKACTVLLRGGSKDVLNEVERNLADAMQVVRNVV
FEPRLLPGGGATEMAVSQALSKKAQEVEGVQQWAFKAAASALEVIPRTLA
QNCGANVVRVLTQLRAKHANEAKCTWGIDGTTGVMTDMRDLGIWEPFTVK
TQTYKTAVEAACMILRIDDIVSGIKHGQKQG*
back to top

mRNA from alignment at Ecto-sp8_S_contig10:24640..35944+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig10.8.1 ID=mRNA_Ecto-sp8_S_contig10.8.1|Name=mRNA_Ecto-sp8_S_contig10.8.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=11305bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10:24640..35944+ (Ectocarpus species8 EcLAC_412)
CGAAGCCGGCTCAACCATGAGCGCCCCCGTGATGGTCCTGCCCGTCAACA
CCAAGAGAGAAACCGGGCGAGCGGCGCAGCTTGGAAACATCACAGCCGCA
AAGGCGGTAGCCGACATCATCAGGACCACCTTGGGACCCAGGTAAGCGCT
GCCGGCGAGGGCCTGCTAGTAGGGGAAACAGGCTTCGGTTGGCGGAGAAG
AGGTGTGCTCGGATTGGTTGGTGGGTTGTTCGGCTTACCGTTTTGGACAA
GGGAGGAGGCTGAAATTGTCGTGTGTTCTTTCTCGCCAGCGTTTGAAAAG
TTGGGGATATCATCAGCGATACAGAAGTCAGTAATGGTGACAATGCGAAC
GGTACGGATCCTATGTATCGCCCATGTCTTAGCTCGCCCCCCCCCCCCTG
GCCTGTGGTGATCTTGCGTGAAGAAACCACACAGGGAAGTGTTGACGTTG
CCATACGGTCACCGCCATGCAGGTGCATTGTATTGCACATCCGTGCACTT
GCCATTTCTTGTCGGTACAGCAGCGGTACATGGTCTACATATATTTTAGA
CACGCACCGATCTTGTTCTCGAAACTCTGACAAGTCACAATCGAAAAAGC
ATCGACACAGCCCGCGTAGCTTACGGACGATGCTCTGGCTATCACGGGAG
TAACAGGTGAAGCAGTCATACCCATGCAAGCTGCCGTGCTGGTAGACGCA
TCCTGCAACCAGATAGCGTACCTCATAAACGCCAGCTACCAGTTGTGCCT
ATGACGTTAAATACCACCCCCCAGCGTGACTATCTCAGCCCGTCTTCCGC
CTCTCCCTCGACAACGGGACGTGGCTGTGTTGGAATGTATCTGTTACTGT
TGTAGTGTTGGACTACCGAGCGAGAAACCGGAATTATGTGGGTAGAAGGC
GTTTTGAACAGGCCTCTCCGTAAAAAGCCGTCGTTTCCAATCCCCTCCCA
TGTACTAAATACGTAGGGCCGTCGATTGCGACCCCCCGAATCATGCAAGA
ATAGCCACTCACAGACGTAACTGTAGAACAGCAGTTGCTGCGCTGGTGGC
CCACTTTTATTTTCAACGACGGCGGCAACAACCCGTTCCGTTCTCTCAAG
CCTAAAGGTGCTCTTCTGGTGGTTGTTTTAGCATCTTCCGTGTTCGTCAA
ACCCACTGCTTGGTATATGTATCTTGTAGGTCTATGCTGAAGATGCTCCT
GGACCCCATGGGCGGTATCGTCATCACTAACGACGGCAACTGCATCCTTC
GAGAGGTGAGCGGCAGACAGAGAGATGGTAAACAAGAGCTTTTTATGCTT
GCATCGTACAACATGCATCATCTCCAGAAGCGAAAGGTCGACAAACTCGC
GTTTTTGATCTGTCAGTGCCACATCTCGCACGACATATCGTTAAGCAAGC
AAAGGTGGGTAGGTCGGTAGATCGGTCGACGATCAGATGCCCTGGGCTAC
ATGGTAGGCTACACCGCTGGTGTTTCAGTGGATCACAATCAAGACACGTC
CCAACCTTTATCTAACATCTACCCCAAAGCATGCTTGTATCGCCAGGACG
TATGCAGTGCGAGAGGGATGGGCACTGGGGTAGCAGTAATGTGGACTATT
TTTTGCGGGGAACTTTTGCCACATCTCAATTGCCGGCAGCCCGTCTTCCA
ACCTGCTGCTGCCTGTGTGGATTGATTGAAGGGATTTATTGGGTTATCAC
TCGGTGCTGAAACTGCTGTCGTTAAACAATCCTCCCTCTCAAGGTTGATG
TGGCCCACCCGGCAGCCAAGAGCATGATCGAGCTCAGCCGTGCTCAGGAT
GAAGAAGTTGGAGATGGTACCACTTCTGTCATCATTCTCAGTGAGTGGTT
GGTAGTTGGTAGTGGTGATTGTGGTGTTGTTGTGTGGTTGTTGCTGCTGC
TCATGCCGTCGCTGTAGGTAGCTGCAGTACTGTCTGCGCTTGACTTGAGT
AACAATGCTACCGACTATCGCCAAGGTATTGTCCTCTGATGTTTTGGTTT
CTGACAAAAAAAAACATGTTGATCTGCATCAGCGAAGATGTGTTAACGAG
GGTTGCGCCGCGGGTGTGTTGCGTGTGATGGTCGCTTCTCTTACATGTAC
CTGTGATGCGATCATCGTTTGTGTCTCCCCGTCTGACCTGTTCCTCAAAT
TTTGCTCAACATTCTTGGCGTTGTTTGCAGCTGGAGAGATGCTTTCGGTG
GCGGAACCCATCCTCACCAGGGGCGTGCACCCGACTCAGGTACACTACAA
TACCCTATAATAGATACACGAGTTGATTAGGTGTACCTTTTCTGTACCCT
TTTTGTCCCTCTCGTCACGTGGCTGCGGTGCCTCGTTCTGTGACCTCCTG
TGCCCGCCACCGCAAAACAGCAGTATTTTGTATTTACATCATCGTCTTTT
CGACGCACGAGTGGATGCATAAAATCCTGTGTTGCATGCCGCGCTTCGGC
AGTAACGTATCTCACTATCATACCAGACGTCCGCTGCTCCTGGGATCCTC
TGCGCTTTTGCCGCACGCTGTGTAACGTATAAGTACGGGCGATCGCATAT
GGGTGCAGTGCAATCGGTTTTTGGAGGTCGATTGCCCCACGACCTCAAAC
ATGTTTGGGTACTGTAGGGTGTGCGGAACTCGACCATCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGATGAGGCTCTC
CGTGGGGTCTGGCGATGAGACGTTTCCTATTGTAGAGCGTCATTCTCGGC
GTTGGCAGCCTCTTACAGCAGCACCTTGCTTGTGGAGTAAACCGACCTCG
AAGAAACGATAGTCGCATTCACACCTGTGCGTTCAGCCTCATGTTCACGA
TACAAACGTAAAATCAGCCTTCATGTATTCCTTGAGTCGTACTCTACTCT
ACTTTGTAGCACTACATGTCACTAGTAGAGAGGCCCCGCCAAGCACTCAC
TGACCGTGTTTCTTTTGGTATATATTGTCCGTTTTTTTGTGCCTGGCTCT
GGGGGGGGTTCCGTAGATCGTCATGGGGTACGCGCGCGCTCTGCAGACGG
CGCTAGACGCTTGTGATGCCCTGGCAGAGACCATCGACGTGGACAACGGC
CCGCAGCTCAAGAAGCTGGTAGACGCCGCTGTGGGAACCAAGTTTTCGCA
CAGGTGCGCTGTTTGCTGTTGTTTTTGTTGCCAATAGAACGGAAGTCCTG
GTCTCGATTTGAAGTTGGTGCTGCTGCTAAGATGTTGAACCGAAATGTGA
TTGGGGTGACGAAGATGGCTCCTGACTCCGTGGATGTATTATCTTGTGAT
GATGCATGAACATTAGTGCATGTGATCCTTGTAGTACATTGATCCTTCTG
TTGTTTGATGTGACTGACCTACTGGCAGGTGGGGCGACAAGTTGGTGTCG
ATGGCGATCGATGCGGTGAAGCGTGTCCGAACGGTGGTGGACGGGCGCGT
GGAGGTGGACGTGAAGCGCTACGCGAGGGTGGAGAAGATCCCCGGGGGAG
AGATGGAGGACTGCACGGTAAGGTTCTGCGGTCATAACAAACAGCACCAC
AACTGACTGTAGCTCGAGCGGTAATATGTATGTCTTCTTACATAAATTGT
CAACAAATGATCGATCTTGTTGTTTGGGTAAGAAAGGGTTCTAAGCTGTC
ATACAGACGTACACGTGGGAGAGATTAGAGGACTGCACGGCAAGATGCAT
GCGTAACTCGAGCGCCAAAGATATGTAGTATGGTCATGATAATACTCTGT
ACGTGTAGATACAGGTAGATGTGCGTGTGGGAGAGAAGCGGAGATTCTAG
TAGTACAAGAGTACTTTAACACGCGAGGGTGCAGGTAGATTATACACTAT
AATAGTTGAATGCTGGGATGCCCCAGAGAGAAGAAAATAAAAAACGAACG
CACCTCGGCCAAAACAAAGAGGGCTCTTAATTCAGTAGTAACGCTTAGAA
CTTTATTCCGATGGCCAGCGGGTTGATTGGGTTGGGTTTTGGGATTGGTA
ATCACGTGTCTGGCCTTCTCTTTTCCATTCTCGCATGTTCTTTCGGTGCC
GTTTTTCGAACCCTTCTTTTGACCTTGGCTTGGTGCTCAACGTCGGCAGG
TGTTGGACGGAGTTATGTTCAACAAGGACGTGACGCACTCCAAGATGAGG
AGAAGGATCGAGAACCCGCGCGTGCTGCTGCTCGACTGTCCGCTAGAGTA
CAAGAAGGGAGAGGTACTGTATTCGTCTGTGCGTGTTGTTCGAGTTGATG
TTTTCTTGATGGCAAAGGGTGGTCAACCCTTGCAAACTCGTAAGACAGAT
TCATTTTTTCCCTTGCCCTGCTGCTCTCTCTGGCCCAGATCCTAAATGTG
TTACGCTCCCCGGTATTGTTTCGTTGAGACAGCTTAGCTTGATCCCTTAC
CCTGCGGCTCTCTCTAGCCCAGATCCTGAGAGTGCTACAAGCTTATCCCG
GGTACTGTCGCCCAAGCCCCCTGACCTTGCGAGACAGCTCAACTTCATCC
CTCTCCCTGCACCTCTCCTTCGCCCAGATCCTAAAGGCGTTACGCTCATC
CCCGGTACAGTACAACAGTAGTCCTAACCCCATTCTTTGCCGGTCCTTGC
CCAACCCTGTGACAGTCCCAGACGAATGTGGAGGTAACCAAGGAGGAGGA
CTGGAACACCCTGCTAAGGATGGAGGAGGAGTACATCGAGAACATCTGTG
CTCAGATCGTGGCCTTCCACCCCGACATCGTCATCACCGAGAAGGGCGTC
AGCGACCTCGCACAGCACTACCTCATGAAGGCCGACATCACGGTGAGAGA
GTGTGACAGAGGGCTAGACAGACCGCCTTACCAACCTAGTTGAACTCCGT
CTGTTGCAGTTTGTAGAGAAGGTGCGACAGATGCCTTGCCAGCTTCGTAT
TTAGTTGAGTTCCTCAACCCTTTGTCTTCCTACCTTTTTTCTCCCGTACT
GCTGTAGTTGTAAGTCAAAAGTTGAAGCCGGAGGCGTGGTCTATGCCTTA
ACACGGACACTGGATTATGATTATATCTTCCAGAAGGGTGCAGTGATCTC
GCTCGGCACTGAGGGAGGGTTGTCGTGAAGACCTCGCCTACAGCGTGTAT
TGCACTAAGAAAGACTTGGATTGACTGCTGCTGCAGCTGTGGTTGTTCAC
CTTCGCAGTACTTGTAGCTGGTCTCACAATCACAATCACAATCACAATCA
CAATTTTGACGACATTTCTCTCTAAGGGTCGAGGTACGCTTGCTTTTGCG
GGGACAGGACAGCTGCAGACGCGTTTTGTGTATAGCCGCACGGACACCAT
ACTTGTGACAGCGGTGTAGATGACCGCTATGCTTGGCGGACTAAAACAGT
TGCATGTTGTGCTTCGCAATCTCGGCTGAAAGCGGGCAAGTTATGGTGGG
TACATGTATTTGTATTTGTTACAAGGAATACGACCAAGATTAAGAGTTGT
GTTCGGCATGTAGTGTTGTTTTGAAGAATCCAATTGAAGGGATGCATTCC
GCACATGTGGGTGTTTTGCCAACCGCGAATGGAATATTAGAATAATCGAA
TGGTATGTAGCTCCTGATTAAAGAGAGCAAGACTCGATATGATTGATGAC
TTTTCTAGAGGAGTGTGTGTGTGTTTCGTCCCATCTATGCTGGGCGCTAA
TCAACAATCGGTACATATGGACTCATCAAGTTGAAACACGGGATTTTTTT
TTCTCTTTTTCTCGTTTTTTGTTCGATTCTGCGTAAGAAGGAAATATCTG
TCTTTCGGTTGGTGGTTGTTTGTGGCGTGACAGGCAGACATGGCATGACA
TCACATGACATGATAACAGCCGCATCGCCCGCGGTAGCTGGCGGTTAGTT
CCACGCACGTTTTGATGACGAGAACGATAGCATGCCATCATACGCATTCG
ACACGACAAGATTCATGTGATCGGCATTGTGCTGGTTGGTTTGTGTGCGT
TGACAACGATAGCACGCGACAAGCTGACAAGATCCATTGATTGATTGATT
TTGTGTTGTGCTGGTTGGTTCGCGCGTGGCAGGCGTTCCGCAGACTGCGC
AAGACGGACAACAACCGCATCGCTCGTGCCGTTGGTGCGACAGTGGTGAG
CAGGCCTGACGAGATCCAGGAGTCGGACATCGGCACGGGCTGCGGGCTGT
TCGAGGTCCGCAAGATCGGAGACGAGTGAGTGTTTTGTTTGTTGTCGTAG
ATCTCGTAGATCTCGTAGATCTATCGTAGATCTATCTAACCAAACGTTTT
CCTCCCTTTCCCGTGGCTATCAACATCTACGAGATGCACGAAATGGCAGT
GAGCAAGACATCAATATTATAACCCAACACCACTACACTATTACAATACT
ATCAATAAAATAGGTACTTCACGTTCCTGGAGGGCTGCAAGGACGCCAAG
GCTTGCACCGTGCTGCTGAGGGGCGGCAGCAAGGACGTGCTGAACGAGGT
CGAACGGAACCTTGCCGACGCCATGCAGGTACAGTACAGCTGTAGTGCCA
TGCAGGTGCCGTAAGCACAACACAACCTCAAAATCTCAACAAGCGCAAGA
AACTTTGTTTCTGTAGCCTGTTTTAAAAATATTCCTTTACTTGAAAGAAT
GCTGAACTTTCCCCACCCCTTTTACCCTGAGCGAGATGTTTTCGACTCCC
TATTGTCACCGAAGTTACAGCTACAGAGCGCGACCGGCCTCATAACACCT
GGCAGGAGAGAACATGGTCTCCGCTTGTTTTAATTTGGTTTAACTAAATA
GTACATGACGCGTTTTGAGATCCGCTGATACGAATCTCGCATGTTGTCTA
GCCTACAGAGCTGGGTTCGCATTCTGGGTTACGGTTGGTACAGCGCGACG
GCGCTATCGTGACGTGAAGCCTACCACGGACCCCAGGCAGTGAACGTAAC
CTTTGCCGACGCCGTGCTGGCATCTACCACACCCCCAGGGTAGAGGGAGA
GAGGGAGGGGGAGAGCCCCACCGCTTATGGCCTACAGTAGTTTGTTTTTG
GAAACCCTGCAGTTCTCTTGTCTGGTTTCTCCCGCCGCGTGGCACGGAGG
AACAAGGATTTATGCACGGCGGAGCATTTTATGCGTTTTCTTTGTCTCTT
ACTTGGCTATGCTTGGGCTCTATCTTCTTTTTCCCCTTCTTCTCTCTCCT
TCTCTGTCTGTGTCTCGCTCTCTCTCTGGTGTGGTAGTCTCTTTCATTGC
ATTCTATGACGAGGATCAACCGTCTTGTTTTGACCTGAGCCTTTACAATC
ACGTCAGTCTCAGCCAGGGACGAAAAGCGCTATCTAAACCACGGGATCCC
GCGACTGGGAAAGGGGGGGGGGGGGGGGAGGGGGGAGCAGCTGGGGGTTT
GGCGGGGGTGGCGACGTTTCGGGGGAAACCGCTCTCCCCTTGACCAAGGG
AATGCCGTCATTCTCGTTATCTATGGGGATAAACGGGAGGATGGAACGAT
TTCAAAACCACAGTTTGCATTACCGACGGAGTGTTCATGGGTTTTGATGC
GTGCGTACTTGTGCTGCAGGTGGTGCGCAATGTGGTGTTCGAGCCGCGCC
TGCTACCCGGTGGTGGTGCGACTGAGATGGCGGTGTCGCAGGCTTTGTCC
AAGAAGGCGCAGGTAGGCCTAATAGGCAATCAATGGCCACGACAAGACCG
GCATGGTGCCGTGACACCAAGATTATGGAAGTACAGCTTTCTATGCATAC
CCGAGTCAAGAGTTCGAGTTTTGAAAGAACCATGCGACTGAACGTGATAC
AGCAATACGGCTGCCGGTGTTGTACCAGTGATGTACTAGTATTGTACGAG
TGATGTACTAGTGTTGTACGGATGACACACACCTTGTTGCGTATTGTATT
CTTGTATTGTAGTATCGTTCAGTGTTGGGCATTTGGGGGCACAGTGTACA
TGCGTTGCGACCTGCGTACCGGGGGACTTGCGGATAGCGTGGTGCGTGTA
GGGCGTTGACGTGATACCATGTCGCGATTCTGGGAGGCATTTTTTTTTTT
CTTGTCTTGAGGCGTTTATCGTCTTGAGGGTCGATGCCTTTCCTACCTCG
ACTGCAAGCGTTAGCGATGCACCTTTTGGCGTGGACAAGAAGAGAATGCT
GCTGCCGTCGCCATCGCCGCCGGTCCAGCGTGCTCATGCTATTACATTAT
GTTGCAGCGAAGCCGGCTCGGTTTGCTCTGCCGTCATGCAAAAGCGAGAG
CGCTGGGTGCGGTGTGGCGTAGCGTAAGGTCTGGAGACCACACCCTGTAG
CCGACTGCTGGTCTTACCAAGCGTGACAGTGTGATGGTTCACGACCGATG
CAACCTGACGACAGGAGTACTTTTAGGACAACCGCAGTGTTGGTATTCTC
TCGATTTCACATGGGGTCTTGGCCAAGCTGAAGTCGTGATTCGACGAGAC
ATGTGTGTCTACAATGTGTCACGATCGCAGTGCTCTGTTTTGCTGGACAT
CACCCCTTACAGTAAATGAAAGGCTTCGACATGACATGCTTCAACCTCCG
GCCATCTTGTTTCCAGCGGCAAGAAAGTAGGCAACACGAGGATAAAACGT
AAAACCAGAAATCAACCCCTTACACTTCCGAGGTATTACACATTTGGTCT
TCGTGGTTTCATTCTTGTCCTGTCCATTCGATCCCTTTGTGTTTGCTGCT
GGATTCCCAGGAGGTGGAAGGTGTGCAGCAGTGGGCATTCAAGGCGGCAG
CTTCTGCGCTGGAGGTCATCCCCCGCACGCTCGCCCAGAACTGCGGGGCA
AACGTCGTGCGAGTGCTCACACAGCTGAGGGTGAGACTACCTTAACTCCA
TAATTTGTGCGGCACATTTCTTTTCCTTCTGTGTATGTTCTCGTTCTCGT
TCTCGTTCTGTATTGTCTTGTTCGATGCCGACACTGTTTTTGTTGTTTGG
GAAGCCCGGCATGAACCATGGTCCCCGCCCCTGTCTACCGTCTGTTGAGC
TTGAATTAGGCTGTTTTGTTTTTGGGATACATTGTGTTTTGCTTTACGTA
GGGTCGGGACTGCCATGAGGCAACAACAACGAAGGGTTTCGGGTAGACAA
ACAGAGTGCATTTTTCTGTTGTTCAAGAACATGCAGGAGTGAATCAATCC
TTAATAGGCTTTTTTTTTTTAACTAAACTCGACGATGCACGGTGTGCCTA
TAGCGTGGGTGCGTCCGTTGTCATCCCATGACGTTGTGTTTCATTTGCAC
CGTATGTTTGTTATGTTTGGAAGCACCGGCCACGGCCACCCAGGAGGACG
TATTTATAGCATGTAGGAGTATTTTACTTTCTTGTGATGCTGCGGTACAC
ATTTACTTGCCATTGTCTCTCAAGCTTTTTTTGCACCTTCTTGTAATTTT
CCGTGGGAAATCGTTAACGCAACGGGAAATGACAGGCAAAACACGCCAAC
GAGGCCAAGTGCACCTGGGGGATAGACGGCACGACCGGCGTGATGACCGA
CATGAGGGACCTCGGGATCTGGGAGCCCTTCACGGTCAAGACGCAGACCT
ACAAGACCGCGGTAGAGGTGAGGTGTGAGGTGCCAGGTGTTGGTGGGAGT
AAGGAACTACTGAGAAGTACGAGCCATCAGGGCGATGGGGCACTCAATAA
GAGTCCGTTCTAGTTGCTGAATCCATTTCTATTTTTTGTGTGTTAGTAGT
AGTTGTCTGCACGTGCAATGTTGTTGTGGAGAAACAAGCCTCGCAAGACA
GTGGTAGCCGGCAAGGGCGAGGAAAAAGCCAAAAAGGCGTTGTCAAACAA
TGTTTGTGTTCGCAGAACACCCGACAACACGAGGCTCGATGGCAGAGGGT
ACAGGCAACGAGTTGCTCCTTGATCATGTACGGGTGGAGAGGAGCATGTG
CCGACTGCCACCCCCAACCGCTAGACCGCCTTCGCGAGGATATTAAGCGT
TAGACTAAATGTCAAATAGAGAGGGGGGTTCCGTAACCGTAACCGTAACC
CTAACCCAACCCAGTAACCGCTACTATCATAGAATTAAGCCAAACGTATT
TTGCTCGCGAAGCGCACTCTCTGCAGACGCAAATAATTGGCGCCTTTTCG
TTAGAGTAAAGAAGTTGTTTTTTTGTTATGCACATGTACCGAAGGGAAAT
TTTCGTGTCGACGGTTGGGTTTTGATCCCCTCCCCTCCCTCTCCGTTGTC
GTCCTCCCCGTCCGTTTGATGTTCCGTTCTTCTGTCGGTGGCAGGCGGCT
TGCATGATCCTTCGCATAGACGACATCGTGTCTGGGATCAAGCACGGACA
AAAACAGGGTTGAGGGCTACAAACCAATGCAGCGACGCGCATCGCATGTG
CACGAGCAGCGTTTAAGATTCTAACTGTTGAAAGCCGCATGGTGGGCAAA
AGAATGCCCGCCGGACGCCAGTCTTGGTTTATTGGTTTCCGAAAAAAATG
TCAAAACATCAAAACATACGAGGCCGTTTTCGATTTGCAAAGGCGATGTG
TGTTGGTAAGGTCCACGTGTGTTCTTCTGGTTCGAAGCGTTCTGTTTCTC
CTGTACCAGAGTGTGGTTTGTCCATCACGCGTGTCGCGGCGAGGTGGTGG
TCCGTTGGTCGTTTTTGTAATGAGAAGAATGGCTTTCCTTGGGTAGACAA
CGCCCTCGTGCTTGCTGCTGCTTGGGCTCGATGGCGGTGGGCTGTCCGCT
TTGTTTGCTAGAATGCTGCGTTATGGAGGTATGTTTAACCACAACCACGC
TACTATTGCCTTTCTTTTTTAACCCGCGACAAGGGTACCAGGCCGCAAGG
CCTACGTATGACGATGTTTCGTCAAGGCAGCCGGGCAATGATCCTGCTGC
TATGGCTCTCGGTACAGCGGAGTATGTCGAAAACAATTACTCCTCCTTAC
TCTGCTTGCCCCACGTGTTATTTAGTGGCCAACACCGCCGTATCTTGGTA
CAAGGCTAATCAAGGGAATCACTGAGCTCTTGGCGCGTTAGTAACGGAGG
CGGTGCATCGAAGAGGAATGCTACAGTACCGTGTGACCAATCCCGTACCG
GAGCTCTTGAGTCTTTCAAAGCAACGCGTGCCAAGTGTTGTGGGGTTTAC
ACGCGTAGTAATATCTGGTATCCGGTATCCGTGAAGACCCTTTTCTGACG
AAGACTCACTTGGTTATCTATCTCTATCTCTTGGAACACCAGTGCTCTTC
TTGGTACATGTAGGCTGAGCACAAGGGGCGAGCATCGCCACCTCCAGAGG
GGGGCCATCACGGCTCATCCCCTGCTCAAATTATATCCTTATGATGATGA
GGAGGAGTTAGTTGCATCTCCCGCCGAAACCCTAACTATAGTATCTAATA
CCAAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10:24640..35944+

>mRNA_Ecto-sp8_S_contig10.8.1 ID=mRNA_Ecto-sp8_S_contig10.8.1|Name=mRNA_Ecto-sp8_S_contig10.8.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1596bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10:24640..35944+ (Ectocarpus species8 EcLAC_412)
ATGAGCGCCCCCGTGATGGTCCTGCCCGTCAACACCAAGAGAGAAACCGG
GCGAGCGGCGCAGCTTGGAAACATCACAGCCGCAAAGGCGGTAGCCGACA
TCATCAGGACCACCTTGGGACCCAGGTCTATGCTGAAGATGCTCCTGGAC
CCCATGGGCGGTATCGTCATCACTAACGACGGCAACTGCATCCTTCGAGA
GGTTGATGTGGCCCACCCGGCAGCCAAGAGCATGATCGAGCTCAGCCGTG
CTCAGGATGAAGAAGTTGGAGATGGTACCACTTCTGTCATCATTCTCACT
GGAGAGATGCTTTCGGTGGCGGAACCCATCCTCACCAGGGGCGTGCACCC
GACTCAGATCGTCATGGGGTACGCGCGCGCTCTGCAGACGGCGCTAGACG
CTTGTGATGCCCTGGCAGAGACCATCGACGTGGACAACGGCCCGCAGCTC
AAGAAGCTGGTAGACGCCGCTGTGGGAACCAAGTTTTCGCACAGGTGGGG
CGACAAGTTGGTGTCGATGGCGATCGATGCGGTGAAGCGTGTCCGAACGG
TGGTGGACGGGCGCGTGGAGGTGGACGTGAAGCGCTACGCGAGGGTGGAG
AAGATCCCCGGGGGAGAGATGGAGGACTGCACGGTGTTGGACGGAGTTAT
GTTCAACAAGGACGTGACGCACTCCAAGATGAGGAGAAGGATCGAGAACC
CGCGCGTGCTGCTGCTCGACTGTCCGCTAGAGTACAAGAAGGGAGAGTCC
CAGACGAATGTGGAGGTAACCAAGGAGGAGGACTGGAACACCCTGCTAAG
GATGGAGGAGGAGTACATCGAGAACATCTGTGCTCAGATCGTGGCCTTCC
ACCCCGACATCGTCATCACCGAGAAGGGCGTCAGCGACCTCGCACAGCAC
TACCTCATGAAGGCCGACATCACGGCGTTCCGCAGACTGCGCAAGACGGA
CAACAACCGCATCGCTCGTGCCGTTGGTGCGACAGTGGTGAGCAGGCCTG
ACGAGATCCAGGAGTCGGACATCGGCACGGGCTGCGGGCTGTTCGAGGTC
CGCAAGATCGGAGACGAGTACTTCACGTTCCTGGAGGGCTGCAAGGACGC
CAAGGCTTGCACCGTGCTGCTGAGGGGCGGCAGCAAGGACGTGCTGAACG
AGGTCGAACGGAACCTTGCCGACGCCATGCAGGTGGTGCGCAATGTGGTG
TTCGAGCCGCGCCTGCTACCCGGTGGTGGTGCGACTGAGATGGCGGTGTC
GCAGGCTTTGTCCAAGAAGGCGCAGGAGGTGGAAGGTGTGCAGCAGTGGG
CATTCAAGGCGGCAGCTTCTGCGCTGGAGGTCATCCCCCGCACGCTCGCC
CAGAACTGCGGGGCAAACGTCGTGCGAGTGCTCACACAGCTGAGGGCAAA
ACACGCCAACGAGGCCAAGTGCACCTGGGGGATAGACGGCACGACCGGCG
TGATGACCGACATGAGGGACCTCGGGATCTGGGAGCCCTTCACGGTCAAG
ACGCAGACCTACAAGACCGCGGTAGAGGCGGCTTGCATGATCCTTCGCAT
AGACGACATCGTGTCTGGGATCAAGCACGGACAAAAACAGGGTTGA
back to top