Ec-00_006380.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-00_006380.1
Unique Name	Ec-00_006380.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	509

Homology

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 974 bits (2517), Expect = 0.000e+0
Identity = 504/508 (99.21%), Postives = 507/508 (99.80%), Query Frame = 3

Query:  522 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNIFEIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGESDSGYEPVC 2045
            MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVR SVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDN+FE+GDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGE+DSGYEPVC
Sbjct:    1 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 885 bits (2288), Expect = 0.000e+0
Identity = 438/513 (85.38%), Postives = 469/513 (91.42%), Query Frame = 3

Query:  522 MELRRSAA-----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNIFEIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGESDSGYEPVC 2045
            ME RR +A     LAL+GLLA+T+                    SDI VSIRYAGTT RLYLESAD G TRGGC TLGQIWESRAGK PLYAVDPDSG+VS + TGTWLLTEELYVEDGITLKVYG++ GGDADELRLLST+ET+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISA+SEI+TDEDETCEGNAKNTMGEARMDIE+SEIGYLG+ DSESYGLTWKVRGFC+DKSNPE+FDDVNVYGN+YDSDIHH+ FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVR+SVGCADNVFS N ISNN++YNAY+YLG+DEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDN+FE+GDADGLVVRFD+A  ++MQGNTGLD+G+FELKV ND+CFDGESDSGYEPVC
Sbjct:    1 MEFRRKSATSSFGLALLGLLASTTPAAAADTASPNDPISKPDCDSDIEVSIRYAGTTKRLYLESAD-GETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 758 bits (1958), Expect = 2.270e-271
Identity = 398/403 (98.76%), Postives = 400/403 (99.26%), Query Frame = 3

Query:  522 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISNNAE 1730
            MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXX DIAVSIRYA +TARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITL+VYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVR SVGCADNVFSNNTISNNAE
Sbjct:    1 MELRRSAALALVGLLAATSTXXXXXXXXXXXXXXXXXXXXDIAVSIRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 715 bits (1846), Expect = 3.210e-253
Identity = 351/468 (75.00%), Postives = 402/468 (85.90%), Query Frame = 3

Query:  639 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNIFEIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGESDSGYEPV 2042
            S IAVS+RY   +ARLY+ESA NG TRGGCVTL QIWE +    PLYAVDP SG+VS SATGTWLLTEE+YVEDGITL+V+G  AGGDADELRLLST++TFI+LRA+GGSLDF+STKVF+WDTS N+PD+DE+DGRSYISA+SE+ITD+ +TC G AKN MGEARMDIE+SE+ YLGY  +E+YGLTWKVRGFC DK NPE+FDDVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEV+NNGYHGIIASKRCNGVSIQGNEVYGG+  SAGIFLHRSSD+ IVKGNYVHDNGDAGLAMLESFNADVS+NTFENNKYGVRLSVGC  N+FS N I+ +AE+N +SYLG D+P+VV SGRSQ+NVF +N+  G  E+I +KEADGTQF+DN F+    D   +RF +AT+ LM GNTGL D    LKVD  A FD  SD G+EP+
Sbjct:   12 SSIAVSVRYNAESARLYIESA-NGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVDSGRSQDNVFMENNIIGGVESILLKEADGTQFIDNTFK----DAAAIRFVDATKTLMSGNTGLADST--LKVDRGATFDESSDHGFEPI 472

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 669 bits (1726), Expect = 1.350e-234
Identity = 333/466 (71.46%), Postives = 380/466 (81.55%), Query Frame = 3

Query:  645 IAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNIFEIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGESDSGYEPV 2042
            IAVSIRY+    RLYLESAD+  TRGGCVTL QIWE + G+ PLYAVD  SG++S SATGTWLLTEEL+VEDGITLKV+G+ AGGDADELRLLST++TFINLRAHGGSLDF+STKVF+WDTS N PD DE DGRSY+SA+SE+ITD+ +TC G AKN MGEARMDIE SE+GYLGY  SESYGLTWKVRGFC DKSN ++F+DVNVYGN+YDSDIHH NFG+YTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVY+NGYHGIIASKRCNGVSIQGNEVYGGA +SAGIFLHR                DAGLAM+ESFNADVS+N FENNKYG+R SVG   NVF NN IS +  Y+ YSYLG+D PDVV SGRSQ+NVF +N+  G  E+IK+ +ADGTQF+DN FE    D   +RF++A + LM GN GL+    +LKV N A FD  SD G+EP+
Sbjct:   40 IAVSIRYSSVYERLYLESADS-KTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVDSGRSQDNVFQENNIIGGVESIKLLDADGTQFIDNTFE----DATTIRFNDAKKTLMSGNIGLN--MSKLKVVNGASFDASSDYGFEPI 498

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 625 bits (1611), Expect = 3.660e-217
Identity = 314/469 (66.95%), Postives = 363/469 (77.40%), Query Frame = 3

Query:  639 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNIFEIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGESDSGYEPVC 2045
            S   VSIRY+ T+ RLYLESAD G TRGGCVTL  IW    G  PLYAV P SG+VS+S TGTWLLTE LYVEDGITL+V+G  AGG ADELRLLST++ FINLRAHGGSLDFVSTKVF+WDTS N    D++ GRSYISA+SE+ITD  + C+G AK  MGEARMDIE SE+ YLGY+ SESYGLTWKVRG C D SN EVFD VNVYGN+YDSDIHH  FG+YTYGH+QGDWRRNKMH N+ YGFDPHDDSDFLTIHDNEVYNNG HGIIASKRCNG          GA  S GIFLHRSSDDAIVK NYVHDNGDAG+A++E+FNADVS N FE+NKYG+R+SVGCADNVFS N I+ +++YN Y+Y G+D P VV SGRSQ+        SG +ET+K+  ADGT+F+DN F+        +RF++    LM GN+GL  G   LKV + +CFD +SDS Y+PVC
Sbjct:   38 SSTKVSIRYSKTSKRLYLESAD-GNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVDSGRSQDXXXXXXXXSGGQETVKLTMADGTEFIDNTFK----SAKTIRFEDCQGTLMSGNSGL--GGASLKVTDGSCFDKKSDSAYKPVC 499

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 610 bits (1574), Expect = 4.000e-210
Identity = 309/468 (66.03%), Postives = 368/468 (78.63%), Query Frame = 3

Query:  648 AVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLST-------NETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNIF-EIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACF 2009
            AVSIRY+ TT RLYLE+   G  RGGCVT+ QIWE+R G      K PLYAVDP SG  S   TGTWLL E+LYVEDGITLKV+G+ +GG ADELRL ST       N T+INLRAHGGSLDF  TKVF WDT+ NS D DETDGRSYISA+SEI+ D  +TCEGNAKNTMGEARMDI +SE+GY+G+ DSESYGLTWKVRGFC+DKSNPEVFD VNVYGN+YDS++HHMNF +YTYGHQQGDWRRN +H NSGYG+DPHDDSDFLTIHDN VY+N +HGIIASKRCN VSIQGN VYGG +TSAGIFLHRSSD A+VK N+ + NGDAG+AMLES NA++S N FE NKYG+R+SVGC DN  SNNT++N ++Y  Y+Y G+D  +V  +GRSQ+N+F  N+  G  + IK+KE+DGT+  +N+F E G     +V F N TEN++ GN GL+D   E+++   ACF
Sbjct:  120 AVSIRYSATTGRLYLEAGVEGE-RGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPTGRSQDNIFDSNTVVGGPQAIKLKESDGTRITNNVFYEPG-----LVEFSNTTENVVTGNVGLEDA-TEVELVEPACF 580

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 601 bits (1549), Expect = 1.000e-207
Identity = 306/469 (65.25%), Postives = 359/469 (76.55%), Query Frame = 3

Query:  639 SDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNIFEIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGESDSGYEPVC 2045
            S   VSIRY+ ++ RLYLESAD G TRGGCVTL +IW+   G  PLYAV P SG+VS+SATGTWLLTE+LYVEDGITL+V+G+ AGG+A+ELRLLST++ FINLRAHGGSLDFVSTKVF+WDTS N    D +  RSYISA+SEIITD  E C+G AK TMGEARMDIE SE+ YLGY  SESYGLTWKVRGFC+D SNPEVFD+VNVYGN+YDSDIHH +FG+YTYGH+QGDWRRNKMH N  YGFDPHDDSDFLTIHDN+V                          G+  S GIFLHRSSDDAIVK N    NGDAG+A++ESFNADVS N FE+NKYGVRLSVGCADNVFS N IS++++YN Y+Y G+D+P VV SGRSQ+N+FS N+ +G +E+IK+  ADGT+F+DN F+         RF++A   LM GNTGL  G   LKV   ACFD +SDS Y+PVC
Sbjct:   41 SSTKVSIRYSASSKRLYLESAD-GKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFKRA----KTARFEDAETTLMSGNTGL--GSATLKVSKGACFDKKSDSDYKPVC 502

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: A0A6H5JU98_9PHAE (MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU98_9PHAE)

HSP 1 Score: 509 bits (1311), Expect = 3.350e-174
Identity = 256/313 (81.79%), Postives = 270/313 (86.26%), Query Frame = 3

Query:  522 MELRRSAA----LALVGLLAATSTXXXXXXXXXXXXXXXXXXXSDIAVSIRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHG 1448
            ME RRSA     LAL+GLLAAT                     SDIAVSIRYA +T RLYLESAD G TRGGCVTLGQIWE+RAGK PLYAVDP+SGN S + TGTWLLTEELYVEDGITLKVYG+  GGDADELRLLST +T+INLRAHGGSLDFV TKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIE+SEIGYLG+ DSESYGLTWKVRGFC+DKSNP +FD+VNVYGN+YDSDIHHM FGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNG HG
Sbjct:    1 MEFRRSATSSFCLALLGLLAATMRAAAADTASPNDPISKPDCDSDIAVSIRYASSTKRLYLESAD-GETRGGCVTLGQIWENRAGKAPLYAVDPESGNESENETGTWLLTEELYVEDGITLKVYGTGEGGDADELRLLSTTDTYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPGIFDEVNVYGNMYDSDIHHMRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGNHG 312

[Close]

BLAST of Ec-00_006380.1 vs. uniprot
Match: Q7XAJ9_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ9_9PHAE)

HSP 1 Score: 459 bits (1182), Expect = 5.610e-155
Identity = 224/326 (68.71%), Postives = 259/326 (79.45%), Query Frame = 3

Query: 1068 EIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNIFEIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGESDSGYEPVC 2045
            EIITD  E C G AK TMGEARMDIE SE+ YLGY  SESYGLTWKVRGFC+D SNPEVFD+VNVYGN+YDSDIHH +FG+YTYGH+QGDWRRNKMH N  YGFDPHDDSDFLTIHDNEVYNNG HGIIASKRCNG          G+  S GIFLHRSSDDAIVK NY  DNGDAG+A++ESFNADVS N FE+NKYGVR+SVGCADNVFS N IS+++EYN Y+Y G+D+P VV SGRSQ+N+FS N+ +G +E+IK+  ADGT+F+DN F+        VRF++A + +M GNTGL  G   LKV   ACFD +SDS Y+PVC
Sbjct:    6 EIITDSKEKCNGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNYXXDNGDAGMALMESFNADVSNNKFEDNKYGVRMSVGCADNVFSKNVISDSSEYNVYTYEGSDDPWVVDSGRSQDNIFSDNTITGGDESIKLTMADGTEFIDNTFK----SAKTVRFEDAQDTIMSGNTGL--GSATLKVSKGACFDKKSDSDYKPVC 325

The following BLAST results are available for this feature:

BLAST of Ec-00_006380.1 vs. uniprot

BLAST of Ec-00_006380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G339_ECTSI	0.000e+0	99.21	Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu...	[more]
D7FXE4_ECTSI	0.000e+0	85.38	Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu...	[more]
D7FXE5_ECTSI	2.270e-271	98.76	Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu...	[more]
Q7XAJ8_9PHAE	3.210e-253	75.00	Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina...	[more]
Q7XAJ7_9PHAE	1.350e-234	71.46	Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat...	[more]
A8CEP1_SACJA	3.660e-217	66.95	Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni...	[more]
D8LD45_ECTSI	4.000e-210	66.03	Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu...	[more]
Q7XAK2_9PHAE	1.000e-207	65.25	Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat...	[more]
A0A6H5JU98_9PHAE	3.350e-174	81.79	MEP5a protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ...	[more]
Q7XAJ9_9PHAE	5.610e-155	68.71	Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_00	contig	chr_00:10062529..10067281 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	399.1
Seed ortholog evalue	3.2e-108
Seed eggNOG ortholog	2880.D8LC73
Length	2050
KEGG ko	ko:K11244
KEGG Pathway	ko04011,ko04139,map04011,map04139
Hectar predicted targeting category	signal peptide
Gene id	Ec-00_006380.1
EggNOG free text desc.	protein xylosyltransferase activity
EggNOG OGs	KOG4157@1,KOG4157@2759
COG Functional cat.	U
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-00_006380	Ec-00_006380	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_00 10055203..10070346 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006380.1	Ec-00_006380.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_00 10063574..10067281 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006380.1.1	Ec-00_006380.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10062529..10062933 +
Ec-00_006380.1.2	Ec-00_006380.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10063456..10063927 +
Ec-00_006380.1.3	Ec-00_006380.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10064329..10064442 +
Ec-00_006380.1.4	Ec-00_006380.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10064762..10064977 +
Ec-00_006380.1.5	Ec-00_006380.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10065262..10065376 +
Ec-00_006380.1.6	Ec-00_006380.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10065591..10065644 +
Ec-00_006380.1.7	Ec-00_006380.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10065904..10065975 +
Ec-00_006380.1.8	Ec-00_006380.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10066261..10066380 +
Ec-00_006380.1.9	Ec-00_006380.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10066586..10066748 +
Ec-00_006380.1.10	Ec-00_006380.1.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_00 10066963..10067281 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006380	5UTR:Ec-00_006380.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_00 10062529..10062933 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-00_006380.1	CDS:Ec-00_006380.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_00 10063574..10063927 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_00:10062529..10067281+
coding sequence from alignment at chr_00:10062529..10067281+

mRNA sequence

>Ec-00_006380.1 ID=Ec-00_006380.1|Name=Ec-00_006380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=509bp
MELRRSAALALVGLLAATSTAAAADTPSPNEPIPKPDCDSDIAVSIRYAG
TTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSAT
GTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSL
DFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTM
GEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGN
VYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDN
EVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGN
YVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISN
NAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQF
LDNIFEIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGES
DSGYEPVC*

spliced messenger RNA

>Ec-00_006380.1 ID=Ec-00_006380.1|Name=Ec-00_006380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2050bp|location=Sequence derived from alignment at chr_00:10062529..10067281+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CAACGCGTATGCCGGGCTATAGAGGTGGTCCATCTGGAGAGGAAGGCGGT
GACGGTACAGTGCTGGAGAAACGTGGTCAGGCTGGAGGCTGACTGGCGGC
GGATGTGGTGCATGTGTCCACGGGTGGATGTCTGGATCCTTCCCAGAAAA
CGTTTTTGGACTTGTGCGCAACGGCCCGCACGCTTTTCCCATCTTCCCAC
CGCATCAAAATGCGAGACCAAAACTTCTGGGAAACGTCGGCACTGGGAGA
TTTAAGGAATAGTACACGACATCGCTCAAGGTTCACACTACAGCCACCAC
CCCCCAACACACACCACTCGGCTACCCATCTCAAGCCTCAACATTCTCAA
CGCGCACCACACACTCCATTCTACAGCAGTACACACGAGCTTTCGCTAGT
GCCTGGCGAAAACAAATCCGCTTGCAGACAAGAAGGACGCTGCCTCGGCC
AAGCAAGCATTGACTTCACGGTCTCCTCGCCACGTTCGGGAAACAGCAGC
TTTTTTCACGTGGCCGACGCATCATGGAGCTCCGACGAAGCGCAGCCTTA
GCCCTGGTCGGCCTTCTCGCCGCCACCAGCACCGCGGCAGCGGCGGACAC
CCCTTCCCCCAACGAGCCCATCCCCAAGCCCGACTGCGACTCCGACATCG
CGGTCTCGATCCGTTACGCCGGCACCACGGCGCGCCTGTATCTCGAGTCG
GCAGACAACGGCACCACCCGCGGCGGCTGCGTGACCCTTGGGCAGATCTG
GGAGAGTCGGGCCGGCAAGGGGCCGCTGTACGCGGTAGACCCTGACTCGG
GGAACGTGAGCACTAGCGCGACCGGCACGTGGCTTCTCACGGAGGAGCTG
TACGTGGAGGACGGCATCACGCTCAAGGTATACGGGTCGGAGGCCGGAGG
AGACGCTGACGAACTCCGACTGCTGAGCACTAACGAAACGTTCATCAACC
TCCGAGCGCATGGCGGGAGCCTGGACTTCGTCAGCACCAAGGTCTTCTCG
TGGGACACGAGCACCAACTCGCCGGACGAAGACGAAACCGACGGCCGGTC
GTACATCAGCGCCATCTCGGAGATCATCACCGACGAGGATGAGACTTGCG
AGGGTAACGCCAAGAACACCATGGGGGAGGCCCGCATGGACATCGAGAGC
AGCGAGATCGGCTACCTTGGGTACTGGGACAGCGAGAGCTATGGCCTCAC
TTGGAAGGTTCGCGGGTTCTGCGAGGACAAGTCTAACCCGGAGGTGTTCG
ACGACGTGAACGTGTACGGCAACGTGTACGACAGCGACATCCACCACATG
AACTTCGGCCTCTACACTTACGGCCACCAGCAGGGAGATTGGAGGAGGAA
CAAGATGCACGACAACTCCGGATACGGCTTCGACCCTCACGACGACAGCG
ACTTCCTCACCATCCACGACAACGAGGTGTACAACAACGGCTACCACGGT
ATCATCGCCTCCAAGCGCTGCAACGGCGTGTCTATCCAGGGCAACGAAGT
GTACGGCGGTGCCGAGACTTCTGCGGGCATCTTCCTGCACCGCAGCAGTG
ACGACGCCATCGTCAAGGGGAACTACGTGCACGACAACGGCGACGCCGGG
TTGGCAATGCTCGAGTCGTTCAACGCCGATGTGTCCGAGAACACGTTCGA
GAACAACAAGTACGGCGTGCGGTTGAGCGTGGGCTGTGCCGACAACGTCT
TCTCCAACAACACCATCAGCAACAACGCCGAGTACAACGCCTATTCGTAC
CTTGGGACGGACGAGCCGGACGTTGTTTCTTCCGGGCGGTCCCAGAACAA
CGTATTCTCACAGAACTCCTTCTCCGGCGCTGAGGAGACGATCAAGATCA
AGGAGGCCGACGGCACCCAGTTCCTCGACAACATCTTCGAGATTGGCGAT
GCCGATGGCCTGGTGGTGCGGTTCGACAATGCCACCGAGAACCTCATGCA
GGGCAACACCGGGCTCGACGACGGGGAGTTCGAGCTCAAGGTGGACAACG
ACGCCTGCTTTGACGGGGAGTCGGACTCCGGCTACGAGCCCGTCTGCTGA

protein sequence of Ec-00_006380.1

>Ec-00_006380.1 ID=Ec-00_006380.1|Name=Ec-00_006380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=509bp
MELRRSAALALVGLLAATSTAAAADTPSPNEPIPKPDCDSDIAVSIRYAG
TTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSAT
GTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSL
DFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTM
GEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGN
VYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDN
EVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGN
YVHDNGDAGLAMLESFNADVSENTFENNKYGVRLSVGCADNVFSNNTISN
NAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQF
LDNIFEIGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGES
DSGYEPVC*

mRNA from alignment at chr_00:10062529..10067281+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-00_006380.1 ID=Ec-00_006380.1|Name=Ec-00_006380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4753bp|location=Sequence derived from alignment at chr_00:10062529..10067281+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CAACGCGTATGCCGGGCTATAGAGGTGGTCCATCTGGAGAGGAAGGCGGT
GACGGTACAGTGCTGGAGAAACGTGGTCAGGCTGGAGGCTGACTGGCGGC
GGATGTGGTGCATGTGTCCACGGGTGGATGTCTGGATCCTTCCCAGAAAA
CGTTTTTGGACTTGTGCGCAACGGCCCGCACGCTTTTCCCATCTTCCCAC
CGCATCAAAATGCGAGACCAAAACTTCTGGGAAACGTCGGCACTGGGAGA
TTTAAGGAATAGTACACGACATCGCTCAAGGTTCACACTACAGCCACCAC
CCCCCAACACACACCACTCGGCTACCCATCTCAAGCCTCAACATTCTCAA
CGCGCACCACACACTCCATTCTACAGCAGTACACACGAGCTTTCGCTAGT
GCCTGGTGAGTGCGGTACAATGTATGACTCGGCAAGTTTTACTTGTAACG
TCCTGTGTCAACGAGGAGGCTACAGCTGTAGTCTATGGCGTCTGGACCAC
AAGCAGTATACTCAGCACATCGCTACGCATCTATCAGGGACCTTGAGCCA
TTTCGTGTAGGATGAGCGTGTTCATGCATGTCGTCGATATCCTGGCATGA
CGAAAACGTGGTTGCTGCTGCTGTCACCAGGCGAACACTCGCGTATGGAG
ACGATGTCAACACATGATTAGGGTGTTTTTTGGGAAGAGTTGACCAGTGC
GCCAAAGCATTCAATGGGTACACGTATGCGAGAGCAATAAAAACATGAAC
AACGGCAGCGTTGAGAAGACATGTTGTAGTCGCTGCTCGAAGTCTCCAAC
ATTCTCCACCAGCTGTGGCCCCGACCAAGGCCTGCAACACCATGAAAATT
GAAAACATGCACACCGACCGACCGTACGCCCTGCTCCCACCTCACTCTCT
CTGAAACTCAAATGTATCTCGGCACAGGCGAAAACAAATCCGCTTGCAGA
CAAGAAGGACGCTGCCTCGGCCAAGCAAGCATTGACTTCACGGTCTCCTC
GCCACGTTCGGGAAACAGCAGCTTTTTTCACGTGGCCGACGCATCATGGA
GCTCCGACGAAGCGCAGCCTTAGCCCTGGTCGGCCTTCTCGCCGCCACCA
GCACCGCGGCAGCGGCGGACACCCCTTCCCCCAACGAGCCCATCCCCAAG
CCCGACTGCGACTCCGACATCGCGGTCTCGATCCGTTACGCCGGCACCAC
GGCGCGCCTGTATCTCGAGTCGGCAGACAACGGCACCACCCGCGGCGGCT
GCGTGACCCTTGGGCAGATCTGGGAGAGTCGGGCCGGCAAGGGGCCGCTG
TACGCGGTAGACCCTGACTCGGGGAACGTGAGCACTAGCGCGACCGGCAC
GTGGCTTCTCACGGAGGAGCTGTACGTGGAGGACGGCATCACGCTCAAGG
TTCGGATTGAGACTGATGAGCAATGTTGACAAACATGGTAGATTTTCATG
TTTGGCGGCATGTTGTGATGGGTCCAACGCGATTCTATTACTTCTATGTA
GGACGACTCGCTCTGGTGCCTTTTTGCCATATTTGTACAGCCGACGGATC
GTTAGCCTACATGAAGGTTTGTCGCATTTCGGGTACAGATCGGGGGGGCG
CATCGTCGACCACCTCTAGGCGAGCTGCTGTTGAACCTTCTTCTACTGCT
GTAGAACGTATCGCGTAGGCACACAATCCCAGCACACGCAACGTGTGTGC
TGGTGTCAACAAGGACCTCGTGAGGGCTGGAAAGGGGCGATGCCTGTCTG
ATCCCAACGTCTCGATATTGCTTTGACGCCTGTTGCTCCCGTCTCAACAG
GTATACGGGTCGGAGGCCGGAGGAGACGCTGACGAACTCCGACTGCTGAG
CACTAACGAAACGTTCATCAACCTCCGAGCGCATGGCGGGAGCCTGGACT
TCGTCAGCACCAAGGTAGACAAGAAGCGACAGCAATCAGCCCGCGCGGGG
CGTTGTCGCCCTCTGTTGCTCATTTTTCGTGGAAGCTGATTGGTCCACTC
GGGGTGCCTTTTGCGTCACGGTCAGGGTTTCCCAGAACCGTTCCCAGAAC
CGTTTCGTTGTTTTCCGTCGTACATTCGACCGTCTGTGTTCCTCGCGCTC
TCTGCTGGTGCTGCCCGTTCCTCCTCTTCTACGCTCCCATCGTACCCCAA
CGTTTAATCTGTTTCGCAAATTATCACACTTTTCCAACGCTCGCTCCCCG
CTCCGCCCCTTGCCCAACGCTGCTGAACTGAAGGTCTTCTCGTGGGACAC
GAGCACCAACTCGCCGGACGAAGACGAAACCGACGGCCGGTCGTACATCA
GCGCCATCTCGGAGATCATCACCGACGAGGATGAGACTTGCGAGGGTAAC
GCCAAGAACACCATGGGGGAGGCCCGCATGGACATCGAGAGCAGCGAGAT
CGGCTACCTTGGGTACTGGGACAGCGAGAGCTATGGCCTCACTTGGAAGG
TGCATACATGTAGTGATTCGGTTTGTGTCGTTTTTGATTCTACATGGTGC
GGTTGGGTTTGATTGTCGTGTCCTATGTCGGCGAACGATGTATTCTGGTA
GGTACGTACGAGGACACGTGTTTGGGAGCTGGCGACGGGTGTGAAGAATT
TTCAACCAACCCGTGTGAACAAACACGTCGTGCGTCCTTCGCGGCGCGTA
CCAGTGGAATCGAGTGGCTGTCTGCGGTGGAACACTTTTAACCTCAGTTG
TTGGTTGGTTGCACTGCGAATGAAACGCCCCAGGTTCGCGGGTTCTGCGA
GGACAAGTCTAACCCGGAGGTGTTCGACGACGTGAACGTGTACGGCAACG
TGTACGACAGCGACATCCACCACATGAACTTCGGCCTCTACACTTACGGT
AAGCTTCGGGACGTTGATTCGGTTTTCGAGTTCTCGTGGTTGGCTGCTGC
CGACAGCGTATCCGCGAGTTTTCGGTGCAGTGGTTGTGTCGTGCGTCAAT
ATTCCTCAGCAACTACTGTAGTCATGACTTCTTCTGTCTTGCAGATCTAG
TCTACTCCTGTGACCCCCCACCGATCCACGCCCTTCTCCCTGTCCGTCAC
GCCATCCGACAGGCCACCAGCAGGGAGATTGGAGGAGGAACAAGATGCAC
GACAACTCCGGATACGGTAAGCTACTTCTTCTTGGTTGTGTCGAAAGATC
TTGTTTCTTCCCTCGTAGTGGCGGCCTTTCGTTCCTATTTCGGTCCGCTG
TTAGCTCTGCTGGTGTTAATTACCGAGTAGTTGGTCGCCCGAAAGCAGGG
CGGTATCTCTCATGACAGTAAGTGTTGAAGGTTTTGCGATACTGTACCCC
CTTACACCCACGTCATCATCTCTCATTTGTATGTCCCGCTGTAACCCCTG
CCTATGCTATGTTGCTACCGGCCAGGCTTCGACCCTCACGACGACAGCGA
CTTCCTCACCATCCACGACAACGAGGTGTACAACAACGGCTACCACGGTG
AGACTACTGTACGATCAAGACGAACAAACCTCTTGCATACCCACCCTCTA
TTCAGTTGGGCTTGCCACTTTGTGTGCTCCCTATATTAGTGCCGTAGCAC
ACGGCGAACGGACATGTTGGGCGGTCAAGCGTCATTTGAGATGCCATATT
TTTCTTCTCTGGTATCGCTGCCATCGATTTGTTGATGCCGTCGGGAAATG
AGCCTTCGGGTTCCCCTTTATCTCACACCTACCTCCCCCTCTTGCGACAC
TTCCCCCTTCTTTGATGACTTCGGCAATCCAGGTATCATCGCCTCCAAGC
GCTGCAACGGCGTGTCTATCCAGGGCAACGAAGTGTACGGCGGTGCCGAG
ACTTCTGCGGGCATCTTCCTGCACCGCAGCAGTGACGACGCCATCGTCAA
GGGTGAGTCGTATTGCTTTGTTCTTGGCGGTGCTCGGGTGTGTTGCTGTG
GGCCCTGCCGTTGGCCGTTTCTTTCGCGCGCACTCCTGTCCTTTCGATGC
TACTGTTTTTCCTACATAGATGCTGGCCTGCCTCCACCCCCCCCTCCCGC
CTCCTTTGAACTGTATACGAAAATCTGACCCCCGTTGTTTTTTTCTATTG
CTCTCAGGGAACTACGTGCACGACAACGGCGACGCCGGGTTGGCAATGCT
CGAGTCGTTCAACGCCGATGTGTCCGAGAACACGTTCGAGAACAACAAGT
ACGGCGTGCGGTTGAGCGTGGGCTGTGCCGACAACGTCTTCTCCAACAAC
ACCATCAGCAACAACGCCGAGTAAGTACGGCCGGGTTTGTTTCTCATCCA
AACGTGCGACATCCACTCTGCCGTTTACCACCTGGTATATCGGCATTGAT
CCACGTGAAAATGGCACAGCAATGGTGCTCGTCTGCCGGAGCACTCACCC
CCCATGATGCCCCCCGCCCCCATTTTGTTCCGAAAAGCGATGTACTCACC
CGAACCCCCTCCCCCCTCTCTCCGCCCTTTTCAGGTACAACGCCTATTCG
TACCTTGGGACGGACGAGCCGGACGTTGTTTCTTCCGGGCGGTCCCAGAA
CAACGTATTCTCACAGAACTCCTTCTCCGGCGCTGAGGAGACGATCAAGA
TCAAGGAGGCCGACGGCACCCAGTTCCTCGACAACATCTTCGAGATTGGC
GATGCCGATGGCCTGGTGGTGCGGTTCGACAATGCCACCGAGAACCTCAT
GCAGGGCAACACCGGGCTCGACGACGGGGAGTTCGAGCTCAAGGTGGACA
ACGACGCCTGCTTTGACGGGGAGTCGGACTCCGGCTACGAGCCCGTCTGC
TGA

Coding sequence (CDS) from alignment at chr_00:10062529..10067281+

>Ec-00_006380.1 ID=Ec-00_006380.1|Name=Ec-00_006380.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1527bp|location=Sequence derived from alignment at chr_00:10062529..10067281+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGAGCTCCGACGAAGCGCAGCCTTAGCCCTGGTCGGCCTTCTCGCCGC
CACCAGCACCGCGGCAGCGGCGGACACCCCTTCCCCCAACGAGCCCATCC
CCAAGCCCGACTGCGACTCCGACATCGCGGTCTCGATCCGTTACGCCGGC
ACCACGGCGCGCCTGTATCTCGAGTCGGCAGACAACGGCACCACCCGCGG
CGGCTGCGTGACCCTTGGGCAGATCTGGGAGAGTCGGGCCGGCAAGGGGC
CGCTGTACGCGGTAGACCCTGACTCGGGGAACGTGAGCACTAGCGCGACC
GGCACGTGGCTTCTCACGGAGGAGCTGTACGTGGAGGACGGCATCACGCT
CAAGGTATACGGGTCGGAGGCCGGAGGAGACGCTGACGAACTCCGACTGC
TGAGCACTAACGAAACGTTCATCAACCTCCGAGCGCATGGCGGGAGCCTG
GACTTCGTCAGCACCAAGGTCTTCTCGTGGGACACGAGCACCAACTCGCC
GGACGAAGACGAAACCGACGGCCGGTCGTACATCAGCGCCATCTCGGAGA
TCATCACCGACGAGGATGAGACTTGCGAGGGTAACGCCAAGAACACCATG
GGGGAGGCCCGCATGGACATCGAGAGCAGCGAGATCGGCTACCTTGGGTA
CTGGGACAGCGAGAGCTATGGCCTCACTTGGAAGGTTCGCGGGTTCTGCG
AGGACAAGTCTAACCCGGAGGTGTTCGACGACGTGAACGTGTACGGCAAC
GTGTACGACAGCGACATCCACCACATGAACTTCGGCCTCTACACTTACGG
CCACCAGCAGGGAGATTGGAGGAGGAACAAGATGCACGACAACTCCGGAT
ACGGCTTCGACCCTCACGACGACAGCGACTTCCTCACCATCCACGACAAC
GAGGTGTACAACAACGGCTACCACGGTATCATCGCCTCCAAGCGCTGCAA
CGGCGTGTCTATCCAGGGCAACGAAGTGTACGGCGGTGCCGAGACTTCTG
CGGGCATCTTCCTGCACCGCAGCAGTGACGACGCCATCGTCAAGGGGAAC
TACGTGCACGACAACGGCGACGCCGGGTTGGCAATGCTCGAGTCGTTCAA
CGCCGATGTGTCCGAGAACACGTTCGAGAACAACAAGTACGGCGTGCGGT
TGAGCGTGGGCTGTGCCGACAACGTCTTCTCCAACAACACCATCAGCAAC
AACGCCGAGTACAACGCCTATTCGTACCTTGGGACGGACGAGCCGGACGT
TGTTTCTTCCGGGCGGTCCCAGAACAACGTATTCTCACAGAACTCCTTCT
CCGGCGCTGAGGAGACGATCAAGATCAAGGAGGCCGACGGCACCCAGTTC
CTCGACAACATCTTCGAGATTGGCGATGCCGATGGCCTGGTGGTGCGGTT
CGACAATGCCACCGAGAACCTCATGCAGGGCAACACCGGGCTCGACGACG
GGGAGTTCGAGCTCAAGGTGGACAACGACGCCTGCTTTGACGGGGAGTCG
GACTCCGGCTACGAGCCCGTCTGCTGA

Synonyms

The feature 'Ec-00_006380.1' has the following synonyms


Synonym
Esi0495_0003
Esi_0495_0003
MEP6