Ec-00_006090.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-00_006090.1
Unique NameEc-00_006090.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length498
Homology
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: D7G317_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G317_ECTSI)

HSP 1 Score: 629 bits (1622), Expect = 8.820e-222
Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 1 
Query:    1 MPGGLSNYPLGDYNHLHRAVAEGSVKKILARLGLGVDDVNANSKVDGETALTMASARGDNRVTKLLVERGADTEGVTLSRQRTALFFSIPYPDVTRILLERGANHGAKDVTGSTPLHLAIRGEIGDAGLEVAXXXXXXXXXXXXXXXXXXXXXXLLSHKGRPAKGRVXXXXXXXXXXXXXXXXXXXXXXXLMFTCVYVTGLVPXXXXXXXXXXXXXXXNTFGSTSLHLLAAGDKVCGAELLDIXXXXXXXXXXXXXXXXXXXXXXXIASKFVDNLGLVKXXXXXXXXXXXXXXXXXXXXXXATIAGSFMTMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKASALLPRSGPSAIYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVVGTGEALSNANECKAAQRLLLRAGAVTATSWLWPRGTHAATPTIKTAAAAPVLTVMMPLLRRRAKGRGFALPAMLR 1491
            MPGGLSNYPLGDYNHLHRAVAEGSVKKILARLGLGVDDVNANSKVDGETALTMASARGDNRVTKLLVERGADTEGVTLSRQRTALFFSIPYPDVTRILLERGANHGAKDVTGSTPLHLAIRGEIGDAGLEVAXXXXXXXXXXXXXXXXXXXXXXLLSHKGRPAKGRVXXXXXXXXXXXXXXXXXXXXXXXLMFTCVYVTGLVPXXXXXXXXXXXXXXXNTFGSTSLHLLAAGDKVCGAELLDIXXXXXXXXXXXXXXXXXXXXXXXIASKFVDNLGLVKXXXXXXXXXXXXXXXXXXXXXXATIAGSFMTMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKASALLPRSGPSAIYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVVGTGEALSNANECKAAQRLLLRAGAVTATSWLWPRGTHAATPTIKTAAAAPVLTVMMPLLRRRAKGRGFALPAMLR
Sbjct:    1 MPGGLSNYPLGDYNHLHRAVAEGSVKKILARLGLGVDDVNANSKVDGETALTMASARGDNRVTKLLVERGADTEGVTLSRQRTALFFSIPYPDVTRILLERGANHGAKDVTGSTPLHLAIRGEIGDAGLEVAXXXXXXXXXXXXXXXXXXXXXXLLSHKGRPAKGRVXXXXXXXXXXXXXXXXXXXXXXXLMFTCVYVTGLVPXXXXXXXXXXXXXXXNTFGSTSLHLLAAGDKVCGAELLDIXXXXXXXXXXXXXXXXXXXXXXXIASKFVDNLGLVKXXXXXXXXXXXXXXXXXXXXXXATIAGSFMTMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKASALLPRSGPSAIYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVVGTGEALSNANECKAAQRLLLRAGAVTATSWLWPRGTHAATPTIKTAAAAPVLTVMMPLLRRRAKGRGFALPAMLR 497
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: D8LP32_ECTSI (Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP32_ECTSI)

HSP 1 Score: 398 bits (1022), Expect = 5.370e-130
Identity = 377/542 (69.56%), Postives = 400/542 (73.80%), Query Frame = 1 
Query:    1 MPGGLSNYPLGDYNHLHRAVAEGSVKKILARLGLGVDDVNANSKVDGETALTMASARGDNRVTKLLVERGADTEGVTLSRQRTALFFSIPYPDVTRILLERGANHGAKDVTGSTPLHLAIRGEIGDAGLEVAXXXXXXXXXXXXXXXXXXXXXXLLSHKGRPAKGRVXXXXXXXXXXXXXXXXXXXXXXXLMFTCVYVTGLVPXXXXXXXXXXXXXXXNTFGSTSLHLLAAGDKVCGAELLDIXXXXXXXXXXXXXXXXXXXXXXXIASKFVDNLGLVKXXXXXXXXXXXXXXXXXXXXXXATIAGSFMTMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKASALLPRS-GPSAIYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVVGTGEALSNA-------------------------------------------NECKAAQRLLLRAGAVTATSWLWPRGTHAATPTIKTAAAA-PVLTVMMPLLRRRAKGRGFALPAMLR 1491
            M GGL+NYP GDYN LHRAVAEG +KKILARLGLGVDD+NA SK  GET LT+ASA G +RVT LL++RGADTE VT SR  TALFFSIPYPDVTR+LLE GAN+GAK + GSTPLH AIRGEIGDA LEVA XXXXXXXXXXXXXXXXXXXX LL+HKGRPAKGRV                       LM TCVYVTGLV  XXXXXXXXXXXXXX       LHLLA+GDKVCG ELL+ XXXXXXXXXXXXXXXXXXXXXXX AS FV N+GLV XXXXXXXXXXXXXXXXXXXXXXA  AGSF TMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKASALLP S G + IYPLE+AAA GHTDIV EL+QR+G++GCGGPS GA ALA AA    VDVM ILL+TGVV TGEALS +                                           N  +A QRLLLRA AVTA SW W  GT AA PT KT  AA P LT MMPLLRRRA  RGFAL AMLR
Sbjct:   12 MSGGLTNYPSGDYNELHRAVAEGRIKKILARLGLGVDDINAPSKTKGETPLTIASAHGYDRVTTLLLDRGADTERVTPSRGWTALFFSIPYPDVTRVLLESGANNGAKSLCGSTPLHFAIRGEIGDACLEVAEXXXXXXXXXXXXXXXXXXXXHLLAHKGRPAKGRVEAAKLLVKFRANIDAMDIKGCTPLMNTCVYVTGLVALXXXXXXXXXXXXXXXXXXXXXLHLLASGDKVCGNELLEXXXXXXXXXXXXXXXXXXXXXXXXXASMFVGNIGLVXXXXXXXXXXXXXXXXXXXXXXXAGFAGSFCTMSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKASALLPSSDGDAIIYPLEIAAALGHTDIVGELVQRVGVDGCGGPSGGAHALALAAKDKRVDVMLILLKTGVVDTGEALSESVNEFACMKSLVQQRLGDSDYLDRYGRCAESIKGAGEQATSDQLNMMRAVQRLLLRAEAVTAISWRWSTGTDAAAPTTKTTTAATPALTAMMPLLRRRAVRRGFALRAMLR 553
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: A0A6H5JFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFP0_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 5.110e-22
Identity = 63/131 (48.09%), Postives = 84/131 (64.12%), Query Frame = 1 
Query:    1 MPGGLSNYPLGDYNHLHRAVAEGSVKKILARLGLGVDDVNANSKVDGETALTMASARGDNRVTKLLVERGADTEGVTLSRQRTALFFSIPYPDVTRILLERGANHGAKDVTGSTPLHLAIRGEIGDAGLEV 393
            MPG   NYP G Y+ LHRAVA GS +++  +L  G+D +N  S    +T L +A   G+  + +LL++RGADTE  T    RTALF S+ YP + RIL++RGANHGA+D  G+TPL LA   + G AG  V
Sbjct:    1 MPGEPPNYPRGPYSDLHRAVASGSTRRVSMQLDTGID-INIASDPAKDTPLIIACRHGELALVQLLLDRGADTER-TNQEGRTALFESLHYPRIARILIDRGANHGAQDNHGATPLLLAATRKSGCAGQAV 129
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: A0A6H5JTV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV7_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 1.990e-13
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 1 
Query: 1054 ASALLPRSGPSA-----IYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVVGTGEALSNANE 1299
            A+ALLP+  P +     + PLE AA  G+ DIV EL+Q  GIEGCGGPS G  ALA AA +  V ++ +LL+ GVV TGE L+ AN+
Sbjct:  112 ANALLPKIDPESRNGKSVLPLEDAAEHGNLDIVHELVQLFGIEGCGGPSGGVGALANAAEFGHVGIVALLLDAGVVDTGETLALAND 198
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.490e-12
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 1 
Query: 1078 GPSAIYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVVGTGEAL 1284
            G +   PL++AA  GHTD+VREL+Q LGIEGC   S GA ALAFAAS   +D+M IL E GVV TG+AL
Sbjct:  275 GNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKAL 343
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 8.560e-9
Identity = 43/84 (51.19%), Postives = 49/84 (58.33%), Query Frame = 1 
Query: 1048 AKASALLPRSGPSA--IYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVVGTGEALSNA 1293
            AKA  LL R   S     PL+ AA  G + +VRE L +LGI+GCGGPS GA AL  AA    VD M +L   GVV TG AL  A
Sbjct:  169 AKADPLLIRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGA 252
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 3.020e-8
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 1 
Query: 1048 AKASALLPRSGPSAIYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVVGTGEALS 1287
            A A+ L+ R+    + PL+ AA +G+  ++REL+QR+GIEGCGG S G +AL  A     V  M +L   GVV TG+AL+
Sbjct:  156 ANANPLITRAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALT 235
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: D7FWJ9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ9_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 6.410e-8
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 1 
Query: 1096 PLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVVGT 1272
            PL++AA +GH+DIVREL+++LGIEGC     G  AL  AAS   VD+M IL   GVV T
Sbjct:  117 PLDIAAQNGHSDIVRELVEQLGIEGCDPKKGGEPALHVAASDQHVDIMAILTGAGVVDT 175
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 2.070e-7
Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 1 
Query: 1048 AKASALLPRSGPSA---IYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALALAFAASYPSVDVMTILLETGVV 1266
            AKA+ LL  S  S+     PLEVAA +G + +V ELL+  GI  CGGPS G  AL  AA Y  VD+M++L++ GVV
Sbjct:  140 AKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVV 215
[Close]
BLAST of Ec-00_006090.1 vs. uniprot
Match: A0A6H5KEI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 8.640e-7
Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 1 
Query: 1048 AKASALLPRSGPSA---IYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGAL-ALAFAASYPSVDVMTILLETGVV 1266
            AKA+ LL RS   +     PLEVAA +G + +VRELL+  GI  CGGPS   L AL  AA Y  VD+M+I++  GVV
Sbjct:   34 AKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLDALRVAAVYGQVDIMSIIMGAGVV 110
The following BLAST results are available for this feature:
BLAST of Ec-00_006090.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7G317_ECTSI8.820e-222100.00Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LP32_ECTSI5.370e-13069.56Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5JFP0_9PHAE5.110e-2248.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTV7_9PHAE1.990e-1351.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI1.490e-1260.87EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7G1I8_ECTSI8.560e-951.19EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LJF9_ECTSI3.020e-845.00EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FWJ9_ECTSI6.410e-855.93EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FVU3_ECTSI2.070e-750.00EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KEI1_9PHAE8.640e-750.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:9918893..9920523 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score634.8
Seed ortholog evalue3.4e-179
Seed eggNOG ortholog2880.D7G317
Preferred nameANKRD65
Length1494
Hectar predicted targeting categoryother localisation
Gene idEc-00_006090.1
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_006090Ec-00_006090Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_00 9918893..9920523 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006090.1.1Ec-00_006090.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 9918893..9920382 +
Ec-00_006090.1.2Ec-00_006090.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_00 9920520..9920523 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006090.1CDS:Ec-00_006090.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_00 9918893..9920382 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-00_006090.1Ec-00_006090.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_00 9918893..9920523 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-00_006090.1 ID=Ec-00_006090.1|Name=Ec-00_006090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=498bp
MPGGLSNYPLGDYNHLHRAVAEGSVKKILARLGLGVDDVNANSKVDGETA
LTMASARGDNRVTKLLVERGADTEGVTLSRQRTALFFSIPYPDVTRILLE
RGANHGAKDVTGSTPLHLAIRGEIGDAGLEVAEILLEFGADANAKDSNGD
APLHLLSHKGRPAKGRVEAAKVLVKSGANIDAVDGRGCTPLMFTCVYVTG
LVPLAEMLVREGANLDVSNTFGSTSLHLLAAGDKVCGAELLDIAMLLIEE
GANIGAVDTNSSTPLHIASKFVDNLGLVKLLVKRGADPDAREITGETPLH
LATIAGSFMTMSVLIAAGANVNLRDLQGETPLFKAAELGHLVAVKMLLRA
KASALLPRSGPSAIYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALA
LAFAASYPSVDVMTILLETGVVGTGEALSNANECKAAQRLLLRAGAVTAT
SWLWPRGTHAATPTIKTAAAAPVLTVMMPLLRRRAKGRGFALPAMLR*
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spliced messenger RNA

>Ec-00_006090.1 ID=Ec-00_006090.1|Name=Ec-00_006090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1494bp|location=Sequence derived from alignment at chr_00:9918893..9920523+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTGGGGGTTTAAGCAATTATCCTCTCGGAGATTACAACCACCTACA
CCGCGCTGTGGCGGAAGGAAGTGTAAAGAAAATCTTAGCACGACTTGGTC
TTGGGGTTGATGACGTCAATGCCAACAGTAAGGTCGATGGGGAGACGGCA
CTCACGATGGCGTCCGCACGAGGCGATAACAGAGTCACCAAATTGCTTGT
CGAACGTGGTGCCGACACCGAAGGCGTGACACTTTCCCGGCAGCGGACGG
CTCTGTTCTTTTCGATTCCATACCCGGACGTAACAAGGATTCTCCTCGAG
CGTGGCGCGAACCACGGGGCGAAGGACGTCACTGGTTCCACACCGCTCCA
CTTGGCTATCCGCGGCGAAATTGGTGACGCCGGCCTGGAGGTCGCGGAGA
TTCTGCTCGAGTTTGGAGCAGATGCCAACGCCAAAGACAGCAACGGGGAC
GCGCCTCTCCACCTCCTATCACACAAAGGGCGGCCAGCGAAGGGGCGCGT
GGAAGCCGCAAAGGTGCTGGTCAAGTCTGGTGCAAACATCGACGCCGTGG
ACGGTAGGGGTTGTACACCACTGATGTTTACCTGTGTGTACGTGACTGGA
CTCGTGCCTTTGGCAGAGATGCTGGTCAGGGAAGGTGCAAACCTGGACGT
ATCCAACACGTTTGGCTCAACATCGCTCCATCTTCTTGCTGCTGGTGATA
AAGTATGCGGTGCCGAACTGCTGGACATTGCGATGCTACTGATCGAAGAA
GGTGCAAACATCGGCGCGGTGGACACCAACAGCTCCACCCCACTTCACAT
TGCATCGAAGTTTGTTGACAACCTTGGCCTCGTCAAGTTGTTGGTAAAGC
GCGGGGCCGACCCGGATGCGAGGGAAATCACCGGAGAGACGCCGCTTCAC
CTGGCTACCATCGCTGGGAGTTTCATGACCATGTCAGTGCTCATCGCTGC
CGGTGCGAACGTCAACCTCCGTGATCTGCAAGGGGAGACACCGCTATTCA
AGGCAGCTGAATTAGGACATCTGGTAGCGGTCAAGATGCTCCTGCGTGCG
AAAGCCAGTGCCCTGTTGCCCAGGTCGGGTCCCAGTGCAATTTACCCACT
GGAAGTTGCGGCGGCATCGGGCCACACCGACATCGTTAGAGAGCTGTTGC
AACGCCTTGGAATCGAGGGTTGTGGTGGGCCGAGTAATGGTGCACTCGCT
CTCGCGTTTGCAGCATCATATCCATCCGTGGATGTCATGACTATTCTTCT
CGAGACAGGCGTTGTCGGTACAGGTGAAGCTCTGTCTAACGCCAACGAGT
GCAAGGCCGCCCAACGTTTGCTACTGCGGGCGGGAGCGGTGACGGCTACT
TCCTGGCTGTGGCCCAGGGGTACGCATGCTGCCACCCCAACCATCAAGAC
TGCTGCCGCTGCACCTGTCCTGACTGTGATGATGCCGCTGCTGAGGCGCA
GAGCTAAGGGGCGCGGGTTTGCTCTGCCCGCCATGTTGAGGTGA
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protein sequence of Ec-00_006090.1

>Ec-00_006090.1 ID=Ec-00_006090.1|Name=Ec-00_006090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=498bp
MPGGLSNYPLGDYNHLHRAVAEGSVKKILARLGLGVDDVNANSKVDGETA
LTMASARGDNRVTKLLVERGADTEGVTLSRQRTALFFSIPYPDVTRILLE
RGANHGAKDVTGSTPLHLAIRGEIGDAGLEVAEILLEFGADANAKDSNGD
APLHLLSHKGRPAKGRVEAAKVLVKSGANIDAVDGRGCTPLMFTCVYVTG
LVPLAEMLVREGANLDVSNTFGSTSLHLLAAGDKVCGAELLDIAMLLIEE
GANIGAVDTNSSTPLHIASKFVDNLGLVKLLVKRGADPDAREITGETPLH
LATIAGSFMTMSVLIAAGANVNLRDLQGETPLFKAAELGHLVAVKMLLRA
KASALLPRSGPSAIYPLEVAAASGHTDIVRELLQRLGIEGCGGPSNGALA
LAFAASYPSVDVMTILLETGVVGTGEALSNANECKAAQRLLLRAGAVTAT
SWLWPRGTHAATPTIKTAAAAPVLTVMMPLLRRRAKGRGFALPAMLR*
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mRNA from alignment at chr_00:9918893..9920523+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-00_006090.1 ID=Ec-00_006090.1|Name=Ec-00_006090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1631bp|location=Sequence derived from alignment at chr_00:9918893..9920523+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCTGGGGGTTTAAGCAATTATCCTCTCGGAGATTACAACCACCTACA
CCGCGCTGTGGCGGAAGGAAGTGTAAAGAAAATCTTAGCACGACTTGGTC
TTGGGGTTGATGACGTCAATGCCAACAGTAAGGTCGATGGGGAGACGGCA
CTCACGATGGCGTCCGCACGAGGCGATAACAGAGTCACCAAATTGCTTGT
CGAACGTGGTGCCGACACCGAAGGCGTGACACTTTCCCGGCAGCGGACGG
CTCTGTTCTTTTCGATTCCATACCCGGACGTAACAAGGATTCTCCTCGAG
CGTGGCGCGAACCACGGGGCGAAGGACGTCACTGGTTCCACACCGCTCCA
CTTGGCTATCCGCGGCGAAATTGGTGACGCCGGCCTGGAGGTCGCGGAGA
TTCTGCTCGAGTTTGGAGCAGATGCCAACGCCAAAGACAGCAACGGGGAC
GCGCCTCTCCACCTCCTATCACACAAAGGGCGGCCAGCGAAGGGGCGCGT
GGAAGCCGCAAAGGTGCTGGTCAAGTCTGGTGCAAACATCGACGCCGTGG
ACGGTAGGGGTTGTACACCACTGATGTTTACCTGTGTGTACGTGACTGGA
CTCGTGCCTTTGGCAGAGATGCTGGTCAGGGAAGGTGCAAACCTGGACGT
ATCCAACACGTTTGGCTCAACATCGCTCCATCTTCTTGCTGCTGGTGATA
AAGTATGCGGTGCCGAACTGCTGGACATTGCGATGCTACTGATCGAAGAA
GGTGCAAACATCGGCGCGGTGGACACCAACAGCTCCACCCCACTTCACAT
TGCATCGAAGTTTGTTGACAACCTTGGCCTCGTCAAGTTGTTGGTAAAGC
GCGGGGCCGACCCGGATGCGAGGGAAATCACCGGAGAGACGCCGCTTCAC
CTGGCTACCATCGCTGGGAGTTTCATGACCATGTCAGTGCTCATCGCTGC
CGGTGCGAACGTCAACCTCCGTGATCTGCAAGGGGAGACACCGCTATTCA
AGGCAGCTGAATTAGGACATCTGGTAGCGGTCAAGATGCTCCTGCGTGCG
AAAGCCAGTGCCCTGTTGCCCAGGTCGGGTCCCAGTGCAATTTACCCACT
GGAAGTTGCGGCGGCATCGGGCCACACCGACATCGTTAGAGAGCTGTTGC
AACGCCTTGGAATCGAGGGTTGTGGTGGGCCGAGTAATGGTGCACTCGCT
CTCGCGTTTGCAGCATCATATCCATCCGTGGATGTCATGACTATTCTTCT
CGAGACAGGCGTTGTCGGTACAGGTGAAGCTCTGTCTAACGCCAACGAGT
GCAAGGCCGCCCAACGTTTGCTACTGCGGGCGGGAGCGGTGACGGCTACT
TCCTGGCTGTGGCCCAGGGGTACGCATGCTGCCACCCCAACCATCAAGAC
TGCTGCCGCTGCACCTGTCCTGACTGTGATGATGCCGCTGCTGAGGCGCA
GAGCTAAGGGGCGCGGGTTTGCTCTGCCCGCCATGTTGAGGTGTGTGTGT
GTGTGTGTATTAATTGCATGGTTACTTTTAATCATCTCCTAAATATCCTG
AAAAAATTAAAATCGAGGTACGATGACCCTTGTCGCCCTTAACTTGGCCT
AACCAATGTTGCATGTGCCTTAACCAGGTGA
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Coding sequence (CDS) from alignment at chr_00:9918893..9920523+

>Ec-00_006090.1 ID=Ec-00_006090.1|Name=Ec-00_006090.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1494bp|location=Sequence derived from alignment at chr_00:9918893..9920523+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGCCTGGGGGTTTAAGCAATTATCCTCTCGGAGATTACAACCACCTACA
CCGCGCTGTGGCGGAAGGAAGTGTAAAGAAAATCTTAGCACGACTTGGTC
TTGGGGTTGATGACGTCAATGCCAACAGTAAGGTCGATGGGGAGACGGCA
CTCACGATGGCGTCCGCACGAGGCGATAACAGAGTCACCAAATTGCTTGT
CGAACGTGGTGCCGACACCGAAGGCGTGACACTTTCCCGGCAGCGGACGG
CTCTGTTCTTTTCGATTCCATACCCGGACGTAACAAGGATTCTCCTCGAG
CGTGGCGCGAACCACGGGGCGAAGGACGTCACTGGTTCCACACCGCTCCA
CTTGGCTATCCGCGGCGAAATTGGTGACGCCGGCCTGGAGGTCGCGGAGA
TTCTGCTCGAGTTTGGAGCAGATGCCAACGCCAAAGACAGCAACGGGGAC
GCGCCTCTCCACCTCCTATCACACAAAGGGCGGCCAGCGAAGGGGCGCGT
GGAAGCCGCAAAGGTGCTGGTCAAGTCTGGTGCAAACATCGACGCCGTGG
ACGGTAGGGGTTGTACACCACTGATGTTTACCTGTGTGTACGTGACTGGA
CTCGTGCCTTTGGCAGAGATGCTGGTCAGGGAAGGTGCAAACCTGGACGT
ATCCAACACGTTTGGCTCAACATCGCTCCATCTTCTTGCTGCTGGTGATA
AAGTATGCGGTGCCGAACTGCTGGACATTGCGATGCTACTGATCGAAGAA
GGTGCAAACATCGGCGCGGTGGACACCAACAGCTCCACCCCACTTCACAT
TGCATCGAAGTTTGTTGACAACCTTGGCCTCGTCAAGTTGTTGGTAAAGC
GCGGGGCCGACCCGGATGCGAGGGAAATCACCGGAGAGACGCCGCTTCAC
CTGGCTACCATCGCTGGGAGTTTCATGACCATGTCAGTGCTCATCGCTGC
CGGTGCGAACGTCAACCTCCGTGATCTGCAAGGGGAGACACCGCTATTCA
AGGCAGCTGAATTAGGACATCTGGTAGCGGTCAAGATGCTCCTGCGTGCG
AAAGCCAGTGCCCTGTTGCCCAGGTCGGGTCCCAGTGCAATTTACCCACT
GGAAGTTGCGGCGGCATCGGGCCACACCGACATCGTTAGAGAGCTGTTGC
AACGCCTTGGAATCGAGGGTTGTGGTGGGCCGAGTAATGGTGCACTCGCT
CTCGCGTTTGCAGCATCATATCCATCCGTGGATGTCATGACTATTCTTCT
CGAGACAGGCGTTGTCGGTACAGGTGAAGCTCTGTCTAACGCCAACGAGT
GCAAGGCCGCCCAACGTTTGCTACTGCGGGCGGGAGCGGTGACGGCTACT
TCCTGGCTGTGGCCCAGGGGTACGCATGCTGCCACCCCAACCATCAAGAC
TGCTGCCGCTGCACCTGTCCTGACTGTGATGATGCCGCTGCTGAGGCGCA
GAGCTAAGGGGCGCGGGTTTGCTCTGCCCGCCATGTTGAGGTGA
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Synonyms
The feature 'Ec-00_006090.1' has the following synonyms
Synonym
Esi0490_0006
Esi_0490_0006