Ec-28_000670.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_000670.1
Unique Name	Ec-28_000670.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	176

Homology

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BLAST of Ec-28_000670.1 vs. uniprot
Match: D7G9E7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E7_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 3.590e-112
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0

Query:    1 MAGMVGASPHLPSVMAVSVDTLFLVVMMCSLVEVVAGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSPSA 175
            MAGMVGASPHLPSVMAVSVDTLFLVVMMCSLVEVVAGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSPSA
Sbjct:    1 MAGMVGASPHLPSVMAVSVDTLFLVVMMCSLVEVVAGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSPSA 175

The following BLAST results are available for this feature:

BLAST of Ec-28_000670.1 vs. uniprot

BLAST of Ec-28_000670.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G9E7_ECTSI	3.590e-112	100.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..99
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..129
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 42..109
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 169..175
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 130..148
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..21
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 149..168
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 22..41
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 145..167
None	No IPR available	TMHMM	TMhelix		coord: 108..130

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:632846..634910 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000670.1	Ec-28_000670.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 632846..635478 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_000670.1 ID=Ec-28_000670.1|Name=Ec-28_000670.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=176bp
MAGMVGASPHLPSVMAVSVDTLFLVVMMCSLVEVVAGFVMWKTSRVTRTE
AALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRR
LKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRA
AGSVGALSIVAMFLFGLVPRLSPSA*