Ec-28_000560.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_000560.1
Unique NameEc-28_000560.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length159
Homology
BLAST of Ec-28_000560.1 vs. uniprot
Match: D7G9E0_ECTSI (PS II complex 12 kDa extrinsic protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E0_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 4.690e-102
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0
Query:    1 MKFTTVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            MKFTTVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR
Sbjct:    1 MKFTTVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158          
BLAST of Ec-28_000560.1 vs. uniprot
Match: A0A836CCI8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCI8_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.990e-56
Identity = 98/159 (61.64%), Postives = 126/159 (79.25%), Query Frame = 0
Query:    1 MKFTTVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAAL-LGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            MK T   VLA    A AFV    P+A + +   +M+A+ P  R  FLKSAA AA + + +AAPALAE+DNPVVPFLGGGDK+D+NNANVRAYIK+ GMYP+ AGK+VSNGPY++V+++Y+IKGLS +EK+ +KK+ESRF+T++PQ MY IDRINNGLYR
Sbjct:    1 MKVTGAIVLAAACGAQAFVA---PSAGVRSTQLSMTAQ-PVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 155          
BLAST of Ec-28_000560.1 vs. uniprot
Match: F0YKI8_AURAN (PS II complex 12 kDa extrinsic protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKI8_AURAN)

HSP 1 Score: 152 bits (384), Expect = 1.200e-44
Identity = 75/116 (64.66%), Postives = 90/116 (77.59%), Query Frame = 0
Query:   43 RGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            R +FL   AGA     +AAPALA+ D   +P+LGG  KID+NNAN+R Y KL GMYP AAGKI SNGPY SVS++Y+IKGL + EKAAIKK+ESRFIT++P  MY IDR+NNGLYR
Sbjct:   22 RRNFLGKVAGAVTGASVAAPALADTDYAGLPYLGGSSKIDINNANIRVYAKLPGMYPGAAGKIASNGPYKSVSDVYNIKGLKDAEKAAIKKYESRFITLEPAPMYVIDRMNNGLYR 137          
BLAST of Ec-28_000560.1 vs. uniprot
Match: A0A6U4G1G5_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4G1G5_9STRA)

HSP 1 Score: 150 bits (380), Expect = 7.290e-44
Identity = 85/151 (56.29%), Postives = 108/151 (71.52%), Query Frame = 0
Query:    9 LACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAAL-LGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            LA V +A+AFVP      +   +TT ++AE  A R +F   AAGAAA+    AAPA A VD   + +LGG   +D+NNANVR Y+K+ GMYP+AAGKIVSNGPY SVS++Y+I GL++ EK AIKK+ESRF+ + P A Y IDRINNGLYR
Sbjct:    7 LATVATAAAFVPQ-----QAGPQTTALNAE--AGRREFFGKAAGAAAVAFAAAAPANAVVDYENIAYLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVSNGPYKSVSDVYNIPGLTSAEKDAIKKYESRFVALKPSADYVIDRINNGLYR 150          
BLAST of Ec-28_000560.1 vs. uniprot
Match: K0TEZ3_THAOC (PS II complex 12 kDa extrinsic protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEZ3_THAOC)

HSP 1 Score: 145 bits (367), Expect = 6.630e-42
Identity = 87/161 (54.04%), Postives = 112/161 (69.57%), Query Frame = 0
Query:    1 MKFTTVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAALLGLAA---PALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            MK   +A L  + +A+AF P+A PAA+     T ++AE+ A R  FL    GAAA  G AA    A A VD   V +LGGG  +DVNNANVRAY++L GMYPSAAGKIV++GPY SV+++Y+I GL++ EK  IKK+ES+F+  DP A Y IDR+NNGLYR
Sbjct:    1 MKTAIIATL--ISTAAAFAPNAQPAAQ-----TALNAEA-ADRRSFL----GAAAAFGAAAIPAAASARVDYENVAYLGGGSTVDVNNANVRAYLRLPGMYPSAAGKIVTHGPYKSVADVYNIPGLTSAEKEVIKKYESKFVAKDPAAEYVIDRVNNGLYR 149          
BLAST of Ec-28_000560.1 vs. uniprot
Match: A0A7S1XZL8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZL8_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.220e-40
Identity = 70/102 (68.63%), Postives = 84/102 (82.35%), Query Frame = 0
Query:   59 LAAP--ALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            LAAP  A+A+VD   +P+LGG +KID+NNANVR Y KL GMYP+AA KI SNGPY SVS++YSIKGLS +EK+ IKK+ESR IT++P AMY IDR NNGLYR
Sbjct:   52 LAAPFAAMADVDYAGLPYLGGSEKIDINNANVRVYAKLPGMYPNAAAKITSNGPYKSVSDVYSIKGLSEKEKSVIKKYESRLITLEPSAMYVIDRTNNGLYR 153          
BLAST of Ec-28_000560.1 vs. uniprot
Match: A0A7S1Z9N8_TRICV (PS II complex 12 kDa extrinsic protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z9N8_TRICV)

HSP 1 Score: 140 bits (353), Expect = 9.060e-40
Identity = 85/160 (53.12%), Postives = 110/160 (68.75%), Query Frame = 0
Query:    1 MKFTTVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSA--AGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            MK   +A +  V  A+AF P+  PA+     +T ++AE  ASR DFL  A  AG AA+ G AAPA A  D   + FLGG   +D+NNANVR Y+K+ GMYP+AAGKIV+NGPY +VS+IYSI GL+  EK  +KK+ESRF+ + P A + IDR+NNGLYR
Sbjct:    1 MKLAVLASVVAV--AAAFAPNQAPAS-----STALNAE--ASRKDFLAGAMAAGVAAVAG-AAPANAVRDYENIGFLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVTNGPYKAVSDIYSIPGLTAGEKEVMKKYESRFVALPPSADFVIDRVNNGLYR 150          
BLAST of Ec-28_000560.1 vs. uniprot
Match: A0A7S0CB11_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CB11_9STRA)

HSP 1 Score: 138 bits (347), Expect = 7.130e-39
Identity = 72/117 (61.54%), Postives = 87/117 (74.36%), Query Frame = 0
Query:   42 SRGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            SR +FL +A  A A++  AAPA A  D   +  LGG + IDVNNANVR Y+KLQGMYP AAGKIVS+GPY SVS++Y I G+S+ EKA IK++E+RF T  P A Y IDRINNGLYR
Sbjct:   33 SRREFLSAATAAVAVVAAAAPANAIRDYENIALLGGSEIIDVNNANVRVYLKLQGMYPGAAGKIVSHGPYESVSDLYKIPGISDGEKAVIKRYEARFTTRPPSADYVIDRINNGLYR 149          
BLAST of Ec-28_000560.1 vs. uniprot
Match: A0A7S2GXA3_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXA3_9STRA)

HSP 1 Score: 138 bits (347), Expect = 7.350e-39
Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 0
Query:    7 AVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAA-ALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            A+LA + SA+A    A  A +   ++T ++AE  A R +F  SAA AA    G+AAPA A VD   + +LGG   +D+NNANVR Y+K+ GMYP+ AGKIVSNGPY+SVS++Y+IKGL++ EK  +KK+ESRF    P A Y IDRINNGLYR
Sbjct:    4 AILAALVSAAA----AFTAPQTVQQSTALNAE--AGRREFFGSAAAAAIGAFGVAAPASAVVDYENIGYLGGSSIVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVSDVYNIKGLTSGEKEILKKYESRFTAKAPSADYVIDRINNGLYR 150          
BLAST of Ec-28_000560.1 vs. uniprot
Match: A0A7S4UVQ5_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UVQ5_9STRA)

HSP 1 Score: 138 bits (347), Expect = 8.280e-39
Identity = 89/161 (55.28%), Postives = 108/161 (67.08%), Query Frame = 0
Query:    1 MKFTTVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAALLGLAA---PALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158
            MK   ++ L  V SA+AF P+A PAA+     T ++AE  A R  FL    GAAA  G AA    A A+VD   V  LGGG  ID+NNANVRAY++LQGMYP AAGKIV++GPY SVS++Y+I GL++ EK  IKK+ESRF    P   Y IDRINNGLYR
Sbjct:    7 MKLAIISAL--VASAAAFAPNAQPAAQ-----TALNAE--ADRRAFL----GAAAAFGAAAIPMAANAKVDYESVGQLGGGSIIDLNNANVRAYLRLQGMYPGAAGKIVTHGPYKSVSDVYNIPGLTSAEKEVIKKYESRFSVNAPAPEYVIDRINNGLYR 154          
The following BLAST results are available for this feature:
BLAST of Ec-28_000560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9E0_ECTSI4.690e-102100.00PS II complex 12 kDa extrinsic protein n=2 Tax=Ect... [more]
A0A836CCI8_9STRA2.990e-5661.64PS II complex 12 kDa extrinsic protein n=1 Tax=Tri... [more]
F0YKI8_AURAN1.200e-4464.66PS II complex 12 kDa extrinsic protein n=1 Tax=Aur... [more]
A0A6U4G1G5_9STRA7.290e-4456.29PS II complex 12 kDa extrinsic protein n=1 Tax=Min... [more]
K0TEZ3_THAOC6.630e-4254.04PS II complex 12 kDa extrinsic protein n=1 Tax=Tha... [more]
A0A7S1XZL8_9STRA1.220e-4068.63PS II complex 12 kDa extrinsic protein n=1 Tax=Pha... [more]
A0A7S1Z9N8_TRICV9.060e-4053.13PS II complex 12 kDa extrinsic protein n=1 Tax=Tri... [more]
A0A7S0CB11_9STRA7.130e-3961.54PS II complex 12 kDa extrinsic protein n=1 Tax=Pro... [more]
A0A7S2GXA3_9STRA7.350e-3953.59PS II complex 12 kDa extrinsic protein n=1 Tax=Hel... [more]
A0A7S4UVQ5_9STRA8.280e-3955.28PS II complex 12 kDa extrinsic protein n=1 Tax=Dit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.320coord: 65..148
e-value: 7.4E-25
score: 88.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.636
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 69..158
IPR010527Photosystem II PsbU, oxygen evolving complexPFAMPF06514PsbUcoord: 78..157
e-value: 3.4E-27
score: 94.3
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..65
score: 7.631

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:564498..568005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000560.1Ec-28_000560.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 564427..568702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_000560.1 ID=Ec-28_000560.1|Name=Ec-28_000560.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=159bp
MKFTTVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSA
AGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPS
AAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTID
RINNGLYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010527PSII_PsbU
IPR006311TAT_signal