Ec-28_000220.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_000220.1
Unique NameEc-28_000220.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length209
Homology
BLAST of Ec-28_000220.1 vs. uniprot
Match: A0A6H5L6C7_9PHAE (GOLD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L6C7_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 2.060e-127
Identity = 188/205 (91.71%), Postives = 196/205 (95.61%), Query Frame = 0
Query:    4 FRYALALVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTFRAAPVDGPFVDKVKVILEHPNGEEPFIAELTEKEQFHRVDKGEGGGTYRVCFHNLKTKGRSTRVELVETTLAVTKGASQVAKHLQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 208
            FRYAL LVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTFRAAPVDGPF DKVKVILEHPNGEEPFIAELTE+ + HRVDKGEGGGTYRVCF N+KTKGRSTRVELVETTLAVT+GASQVAKHLQP DELLKHAK+LAKSLSEQLRE+ASSEREG+DSDKVLRSRIN VA FTV+ LLSVSGWQLSLLNKFFRSKKLI
Sbjct:    3 FRYALVLVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTFRAAPVDGPFSDKVKVILEHPNGEEPFIAELTEERESHRVDKGEGGGTYRVCFRNMKTKGRSTRVELVETTLAVTQGASQVAKHLQPVDELLKHAKELAKSLSEQLRENASSEREGLDSDKVLRSRINIVAAFTVLGLLSVSGWQLSLLNKFFRSKKLI 207          
BLAST of Ec-28_000220.1 vs. uniprot
Match: A0A835Z684_9STRA (Emp24/gp25L/p24 family/GOLD-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z684_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 1.280e-17
Identity = 64/194 (32.99%), Postives = 102/194 (52.58%), Query Frame = 0
Query:   26 IDVLPGETRCVGDSVRVGEDTT--FTFRAAPVDGPFVD----KVKVILEHPNGEEPFIAELTEKEQFHRVDKGEGGGTYRVCFHNLKTKGRSTRVELVETTLAVTKGASQVAKH-----LQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 208
            +DV PG+TRC+G+   +GEDT   F F+ AP +   +D     V V++  P+G+  F   L  ++        EG G Y +CF +      +  ++ V+ ++     +    K      LQP + LL  A+D A++++ ++  S   E E   +   +  RIN  ALF++VVLL +S WQ+  L KFFRSKKL+
Sbjct:   22 LDVQPGDTRCLGE--ELGEDTPAKFVFKQAPRNNKPLDFNSKGVYVMVTDPSGKSIFKQMLRGEQDVEFQYTSEGPGLYHICFSS-----SAHSIQRVDLSVGRHYDSESFVKSIKEEALQPLELLLSRAEDAARAINAEMDLSIQRESELKYTSVNMEWRINAFALFSIVVLLGLSAWQIVFLKKFFRSKKLL 208          
BLAST of Ec-28_000220.1 vs. uniprot
Match: W7TMZ8_9STRA (Transmembrane emp24 domain-containing protein 10 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMZ8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 9.180e-13
Identity = 60/209 (28.71%), Postives = 103/209 (49.28%), Query Frame = 0
Query:    1 MQLFRYALALVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTFRAAPVDGPFVDKVKVILEHPNGEEPFIAELTEKEQFHRVDKGEGGGTYRVCFHNLKTKGRSTRVELVETTLAVTKGASQVAK-HLQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 208
            + LF   LAL+ L  A       I +D+ P  TRCV D     ED+T   RA    G   D ++ ++  P+    +   LT K +  ++   +  G Y++CF N   + +   V L++  + +    +   K HLQP   L + A+     +S++L      E    ++ +    RI + ++F++V+LL+VS WQ++ L  FFR+KKL+
Sbjct:   42 LLLFSCQLALLSLVNA-------IQLDLQPHTTRCVADEYAPEEDSTIKVRAV---GRVQDGIRGMVSTPDNRLFWDGYLTAKIEDVKIP-ADYFGLYKICFWNGGREVQRVEVGLLDKAVQLHNAETAKTKEHLQPLQLLFRRAELTVAGVSKELDSVRQREASLRETSESTNRRIQWFSIFSIVILLAVSIWQVTFLKSFFRAKKLL 239          
BLAST of Ec-28_000220.1 vs. uniprot
Match: A0A7S2V9A1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9A1_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 3.940e-7
Identity = 50/200 (25.00%), Postives = 85/200 (42.50%), Query Frame = 0
Query:   25 LIDVLPGETRCVGDSVRVGEDTTFTFRAAPV--DGPFVDKVKVILEHPNGEEPFIAELTEKEQFHRV-----------DKGEGGGTYRVCFHNLKTKGR---STRVELVETTLAVTKGASQVAKHLQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 208
            ++D+ PGE RC+G  V     TTF+    P   D   + K +   E P   +  +    +K  F R             K    G + +CF N     R   S  VE+ +T +A      ++  HL P +   K  +   KS++ ++    + E     + +    RI + +  ++ +LL+V   Q+  L +FF SKKL+
Sbjct:    1 MLDLEPGEERCIGQEVGDNAATTFSMHVVPSREDEKGLSKNEA-YEKPARVQATVRNPWKKRLFRRELLFSPATTVYEPKKVDAGLHTICFQNYNDSPRRRISLEVEVADTKVA------RIKDHLAPVERSFKRTETALKSINNEMDYMRAREARMAATSESTARRIQWFSFLSIFILLAVCAVQIFYLKRFFLSKKLL 193          
BLAST of Ec-28_000220.1 vs. uniprot
Match: A0A4D9D304_9STRA (GOLD domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D304_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 8.700e-7
Identity = 34/114 (29.82%), Postives = 62/114 (54.39%), Query Frame = 0
Query:   96 GTYRVCFHNLKTKGRSTRVELVETTLAVTKGASQVAK-HLQPADELLKHAKDLAKSLSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNKFFRSKKLI 208
            G Y++CF N   + +   V L++  + +    +   K HLQP   L + A+     +S++L      E    ++ +    RI + ++F++V+LL+VS WQ++ L  FFR+KKL+
Sbjct:   30 GLYKICFWNGGREVQRVEVGLLDKAVQLQNAETAKTKEHLQPLQLLFRRAELTVAGVSKELDSVRQREASLRETSESTDRRIQWFSIFSIVILLAVSIWQVTFLKSFFRAKKLL 143          
The following BLAST results are available for this feature:
BLAST of Ec-28_000220.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L6C7_9PHAE2.060e-12791.71GOLD domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z684_9STRA1.280e-1732.99Emp24/gp25L/p24 family/GOLD-domain-containing prot... [more]
W7TMZ8_9STRA9.180e-1328.71Transmembrane emp24 domain-containing protein 10 n... [more]
A0A7S2V9A1_9STRA3.940e-725.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D304_9STRA8.700e-729.82GOLD domain-containing protein n=1 Tax=Nannochloro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 23..203
e-value: 5.8E-13
score: 59.1
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 26..203
e-value: 1.6E-17
score: 64.0
IPR015720TMP21-relatedPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 27..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..198
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..208
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..177
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.615
NoneNo IPR availableTMHMMTMhelixcoord: 176..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:281396..285632 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000220.1Ec-28_000220.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 280686..285956 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_000220.1 ID=Ec-28_000220.1|Name=Ec-28_000220.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=209bp
MQLFRYALALVGLSIAYGIEPTPILIDVLPGETRCVGDSVRVGEDTTFTF
RAAPVDGPFVDKVKVILEHPNGEEPFIAELTEKEQFHRVDKGEGGGTYRV
CFHNLKTKGRSTRVELVETTLAVTKGASQVAKHLQPADELLKHAKDLAKS
LSEQLRESASSEREGIDSDKVLRSRINFVALFTVVVLLSVSGWQLSLLNK
FFRSKKLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720TMP21-related