Ec-28_000210.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_000210.1
Unique Name	Ec-28_000210.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	928

Homology

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BLAST of Ec-28_000210.1 vs. uniprot
Match: A0A6H5L9A3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9A3_9PHAE)

HSP 1 Score: 807 bits (2084), Expect = 2.670e-284
Identity = 450/577 (77.99%), Postives = 466/577 (80.76%), Query Frame = 0

Query:    1 MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGDSRGACISSPRT-AAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLKRLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPXXXXXXXXXXSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVNGSGAKLYLPVSGERLNTRAPPSSAGAADTTNDDGTTSGSRSNPTSLAEPILWLADTVQRMRLESEGLVRVTADSLVGARVSRKTPLGGGRVTAVRNVKIRCDLRTAASSARVGMTTVPVTGSKRERCANAAFSETRSEEPELSDLGESLGMPMQEAQSCCSCSTASSDHDVGLKVPEVGLAAGLGAVGHHGDRERYQGEDGSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVSRRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNERTREGFGSQRAGIESRSTNRREAPSQ 576
            MK L NTSRLSLTSLHNAARR DS SLQRLIATIDPLAA+KI AVL+DGDSRGACISSPRT AAAPKNK          ++ +  +       +K PSRLKRLLQ+QDSKRRT L+VACASGNTEIADALLTVGASLDGHGAWQRTP          SAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDA ERW FTLEV+LDGWKM NGSG KLYLPVS                            RSNPTS AEPI  LADTVQRMRLESE LV VTADSL+GARVSR+TPLGGGRVTAVRNVKIRCDLRTAASS R G+TT   TGSKRER ANA  SETRSEEP+LSD GESLGMPMQEAQ C S ST SS H VGLKV EVGL AGLGAVGHHGDRER+QGEDG KAT SCATPRGPENA HGHRQV PSGECSTRRCLS RLVQVAS  GVSRR  EQ   SE SWA DGDTDDESGAPDDWSVGTESAAE DACVAT VNERTREGFGSQRAG +SRSTN R APSQ
Sbjct:    1 MKCLENTSRLSLTSLHNAARREDSASLQRLIATIDPLAADKIGAVLQDGDSRGACISSPRTPAAAPKNKEH--------TRCLSTRWPE----EKAPSRLKRLLQQQDSKRRTVLFVACASGNTEIADALLTVGASLDGHGAWQRTPLHIAAFEGHTSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAAERWTFTLEVDLDGWKMGNGSGVKLYLPVS----------------------------RSNPTSFAEPIPRLADTVQRMRLESEDLVNVTADSLIGARVSRRTPLGGGRVTAVRNVKIRCDLRTAASSTRAGLTTATATGSKRERRANATLSETRSEEPDLSDRGESLGMPMQEAQPCRSFSTTSSGHYVGLKVLEVGLTAGLGAVGHHGDRERHQGEDGPKATNSCATPRGPENAVHGHRQVAPSGECSTRRCLSTRLVQVASNHGVSRRQLEQWPPSEGSWANDGDTDDESGAPDDWSVGTESAAELDACVATTVNERTREGFGSQRAGTQSRSTNGRGAPSQ 537

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BLAST of Ec-28_000210.1 vs. uniprot
Match: D7FIG7_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG7_ECTSI)

HSP 1 Score: 699 bits (1804), Expect = 6.150e-244
Identity = 411/576 (71.35%), Postives = 411/576 (71.35%), Query Frame = 0

Query:    1 MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGDSRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLKRLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPXXXXXXXXXXSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVNGSGAKLYLPVSGERLNTRAPPSSAGAADTTNDDGTTSGSRSNPTSLAEPILWLADTVQRMRLESEGLVRVTADSLVGARVSRKTPLGGGRVTAVRNVKIRCDLRTAASSARVGMTTVPVTGSKRERCANAAFSETRSEEPELSDLGESLGMPMQEAQSCCSCSTASSDHDVGLKVPEVGLAAGLGAVGHHGDRERYQGEDGSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVSRRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNERTREGFGSQRAGIESRSTNRREAPSQ 576
            MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGDSRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLKRLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPXXXXXXXXXXSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVNGSGAKLYLP                                                                                                                                                                     VPEVGLAAGLGAVGHHGDRERYQGEDGSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVSRRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNERTREGFGSQRAGIESRSTNRREAPSQ
Sbjct:    1 MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGDSRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLKRLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPXXXXXXXXXXSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAAIMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVNGSGAKLYLP---------------------------------------------------------------------------------------------------------------------------------------------------------------------VPEVGLAAGLGAVGHHGDRERYQGEDGSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVSRRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNERTREGFGSQRAGIESRSTNRREAPSQ 411

The following BLAST results are available for this feature:

BLAST of Ec-28_000210.1 vs. uniprot

BLAST of Ec-28_000210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L9A3_9PHAE	2.670e-284	77.99	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FIG7_ECTSI	6.150e-244	71.35	Ankyrin repeat domain protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 920..927
None	No IPR available	PANTHER	PTHR24134	FAMILY NOT NAMED	coord: 101..204
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 109..138 e-value: 0.052 score: 22.7 coord: 10..39 e-value: 3800.0 score: 0.7 coord: 142..174 e-value: 0.71 score: 18.9
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 142..174 score: 10.873
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 109..141 score: 9.484
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 2..201 e-value: 1.0E-21 score: 79.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 12..187
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 99..170 e-value: 1.3E-9 score: 38.5
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 109..179 score: 20.288

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:273794..279507 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000210.1	Ec-28_000210.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 273732..281422 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_000210.1 ID=Ec-28_000210.1|Name=Ec-28_000210.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=928bp
MKHLANTSRLSLTSLHNAARRGDSTSLQRLIATIDPLAAEKIAAVLRDGD
SRGACISSPRTAAAPKNKVKGKGAGRTTSKLVHAQGKSGGKKKKTPSRLK
RLLQKQDSKRRTALYVACASGNTEIADALLTVGASLDGHGAWQRTPLHIA
AFEGHTSAMRRLLGAGADPWALNDRGQTPSEVSQMFNANREALGLLEEAA
IMRREVSTGTEGLIGTTFVHDDGQVGTVVDAVERWAFTLEVELDGWKMVN
GSGAKLYLPVSGERLNTRAPPSSAGAADTTNDDGTTSGSRSNPTSLAEPI
LWLADTVQRMRLESEGLVRVTADSLVGARVSRKTPLGGGRVTAVRNVKIR
CDLRTAASSARVGMTTVPVTGSKRERCANAAFSETRSEEPELSDLGESLG
MPMQEAQSCCSCSTASSDHDVGLKVPEVGLAAGLGAVGHHGDRERYQGED
GSKATISCATPRGPENAGHGHRQVGPSGECSTRRCLSARLVQVASKRGVS
RRHREQRASSEDSWAKDGDTDDESGAPDDWSVGTESAAEFDACVATPVNE
RTREGFGSQRAGIESRSTNRREAPSQDIGLRTHRFSFLDNLVPLAALEGV
LDCNHLPPSAVAPQSRARRRQLLSHWNTRMSVSMAAGGGASAAPTSYQRR
RAHRHDILQHSSGGYSVSPSPASTHSMLEVDDLSERGARDGEGDDDLLSI
VGLEEKIEREERSPERMDGRRIGVEATRKAVREALVLWSGKADILQGRLV
VLRTVSASVASTVASSHTQNATRSVSLEELLASPSPRCCACDMRDGYCRR
DDYDRQTPIPPASDNIRRGSDISTASNNGTIDTAQKHTSGPVAHACYSCA
AKSTNVGSEPHGDLHVDGASSDDYRNTCAGVDDFGGTVKDTSTSREEGLV
VDLEECLVHMTHLRDWLRLLDQEIGQL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom