Ec-28_000140.3 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-28_000140.3
Unique NameEc-28_000140.3
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length990
Homology
[Close]
BLAST of Ec-28_000140.3 vs. uniprot
Match: D7FIG1_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG1_ECTSI)

HSP 1 Score: 1908 bits (4942), Expect = 0.000e+0
Identity = 989/989 (100.00%), Postives = 989/989 (100.00%), Query Frame = 0 
Query:    1 MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTR 989
            MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTR
Sbjct:    1 MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTR 989
[Close]
BLAST of Ec-28_000140.3 vs. uniprot
Match: A0A6H5L5Z7_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z7_9PHAE)

HSP 1 Score: 1327 bits (3435), Expect = 0.000e+0
Identity = 739/991 (74.57%), Postives = 769/991 (77.60%), Query Frame = 0 
Query:   32 DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCR--------------------------------SQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSP-PVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTR 989
            DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHE VRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFG PL+PDLDGDKPVEDFLEYAKTPHLEL HD GGDVA  TRGGGRKDGRAELLVIGRQDW+STL+TCR                                SQF NTT+KYDA KEPD LKSKARLAFNFPAKGRAGDQL+IAIKYLTERVAFCADLPLEQ+    A+I L   ++     F     C                          EGDLFGDEY SVAVK VLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLP+GVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQ H+QPG G EEEEAQRYGPGDIVGW                           +  +  + E  P           KRR++                               +  +  + RYIA+THKQKL+GPSS SHSGGLGD+ESLDGESELGEFFSGHGG DRNAPTLFSGGGTWKDQRKTG+MSPPV RLR           T I +EECESRRPN    P GV AL++GISSRDNWPRXXXXXXXXXXXRVGLTDS AD ISTAPQG H LRRSLQSAPSS      PVIWGYARVA RGI GHGDEAEARGGRCSCPMESCRVC+PLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCT RN GTIAQ KATTDTPGNTLS+ELK ST RP   PYVHHAGKAHV HPTGG AAGDEAFGGK TLWGGWGLPSSKIGGTG+G VAKG DGAHGGTSTSGNKLA GAHVGFHDRRTSPAGQGGAVIAVADAP TAAVAPMSDFGVTNTSLGRG RREPDSGSE+SLPPAAA LPPDQPHLARLSYTLVQLSTR
Sbjct:   17 DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHEFVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGHPLDPDLDGDKPVEDFLEYAKTPHLELPHDGGGDVAAKTRGGGRKDGRAELLVIGRQDWVSTLRTCRHVTIVTFGLNTLSSVARLLLGRTFYLHKTISRSQFLNTTEKYDALKEPDPLKSKARLAFNFPAKGRAGDQLKIAIKYLTERVAFCADLPLEQMPTRLASIPLPYDSLDATSRFHVLCAC-------------------------REGDLFGDEYLSVAVKHVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPKGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQFHRQPGTGKEEEEAQRYGPGDIVGW---------------------------EQGVQMAVEGVP-----------KRRTK-------------------------------QPRLGSVARYIAYTHKQKLQGPSSLSHSGGLGDDESLDGESELGEFFSGHGGCDRNAPTLFSGGGTWKDQRKTGKMSPPVTRLR-----------TVIPTEECESRRPNTAASPVGVQALLDGISSRDNWPRXXXXXXXXXXXRVGLTDSTADPISTAPQGTHKLRRSLQSAPSSXXXXXXPVIWGYARVAGRGIDGHGDEAEARGGRCSCPMESCRVCTPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTMRNTGTIAQTKATTDTPGNTLSLELKRSTSRPGLTPYVHHAGKAHVIHPTGGKAAGDEAFGGKSTLWGGWGLPSSKIGGTGNGVVAKGGDGAHGGTSTSGNKLAKGAHVGFHDRRTSPAGQGGAVIAVADAPVTAAVAPMSDFGVTNTSLGRGDRREPDSGSEISLPPAAAILPPDQPHLARLSYTLVQLSTR 902
The following BLAST results are available for this feature:
BLAST of Ec-28_000140.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIG1_ECTSI0.000e+0100.00Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5L5Z7_9PHAE0.000e+074.57Cyclic nucleotide-binding domain-containing protei... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 221..360
e-value: 1.2E-6
score: 30.0
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 56..203
e-value: 4.3E-6
score: 28.5
NoneNo IPR availablePANTHERPTHR23011UNCHARACTERIZEDcoord: 270..423
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 57..128
score: 10.428
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 57..128
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 372..457
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 231..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:189814..201092 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000140.3Ec-28_000140.3Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_28 186022..201092 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-28_000140.3 ID=Ec-28_000140.3|Name=Ec-28_000140.3|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=990bp
MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALER
LGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRG
TVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTP
HLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNT
TDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADL
PLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDK
SGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARE
CRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKL
AEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGW
PYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQER
KRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHT
HKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGG
GTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLP
GGVHALIEGISSRDNWPRPRPSTRTRWRWRVGLTDSIADRISTAPQGIHN
LRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMES
CRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNI
GTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIA
AGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLA
GGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGA
RREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like