Ec-28_000140.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-28_000140.2
Unique Name	Ec-28_000140.2
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	2097

Homology

[Close]

BLAST of Ec-28_000140.2 vs. uniprot
Match: D7FIG1_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIG1_ECTSI)

HSP 1 Score: 1993 bits (5162), Expect = 0.000e+0
Identity = 1031/1032 (99.90%), Postives = 1032/1032 (100.00%), Query Frame = 0

Query:    1 MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEPLANLCLRILGSFACEKEATTRVSNLYRSILPPSSI 1032
            MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEPLANLCLRILGSFACEKEATTRVSNLYRSILPPSS+
Sbjct:    1 MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEPLANLCLRILGSFACEKEATTRVSNLYRSILPPSSV 1032

[Close]

BLAST of Ec-28_000140.2 vs. uniprot
Match: A0A6H5L5Z7_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Z7_9PHAE)

HSP 1 Score: 1406 bits (3640), Expect = 0.000e+0
Identity = 783/1052 (74.43%), Postives = 817/1052 (77.66%), Query Frame = 0

Query:   32 DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTPHLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCR--------------------------------SQFTNTTDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADLPLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDKSGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGWPYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQERKRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHTHKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGGGTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLPGGVHALIEGISSRDNWPRXXXXXXXXXXXRVGLTDSIADRISTAPQGIHNLRRSLQSAPSSSSSSP-PVIWGYARVAERGIGGHGDEAEARGGRCSCPMESCRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNIGTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIAAGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLAGGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGARREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEPLANLCLRILGSFACEKEATTRVSNLYRSILPPSSIVWLPCQGSTARWKDQLAL 1050
            DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHE VRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFG PL+PDLDGDKPVEDFLEYAKTPHLEL HD GGDVA  TRGGGRKDGRAELLVIGRQDW+STL+TCR                                SQF NTT+KYDA KEPD LKSKARLAFNFPAKGRAGDQL+IAIKYLTERVAFCADLPLEQ+    A+I L   ++     F     C                          EGDLFGDEY SVAVK VLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLP+GVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQ H+QPG G EEEEAQRYGPGDIVGW                           +  +  + E  P           KRR++                               +  +  + RYIA+THKQKL+GPSS SHSGGLGD+ESLDGESELGEFFSGHGG DRNAPTLFSGGGTWKDQRKTG+MSPPV RLR           T I +EECESRRPN    P GV AL++GISSRDNWPRXXXXXXXXXXXRVGLTDS AD ISTAPQG H LRRSLQSAPSS      PVIWGYARVA RGI GHGDEAEARGGRCSCPMESCRVC+PLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCT RN GTIAQ KATTDTPGNTLS+ELK ST RP   PYVHHAGKAHV HPTGG AAGDEAFGGK TLWGGWGLPSSKIGGTG+G VAKG DGAHGGTSTSGNKLA GAHVGFHDRRTSPAGQGGAVIAVADAP TAAVAPMSDFGVTNTSLGRG RREPDSGSE+SLPPAAA LPPDQPHLARLSYTLVQLSTRAALDP EP ANLCLRILGSFACEK+ATTRVSNLYRSILPPSS+       STA++  Q  L
Sbjct:   17 DGDDRTVSELIRFQDALERLGLLWTPLDSLDKHQAHEFVRNLHLELTAPGDMVYLKHSPAMRSYVVLRGTVLLTNNVLDREGAEGVRVLGAGQEFGHPLDPDLDGDKPVEDFLEYAKTPHLELPHDGGGDVAAKTRGGGRKDGRAELLVIGRQDWVSTLRTCRHVTIVTFGLNTLSSVARLLLGRTFYLHKTISRSQFLNTTEKYDALKEPDPLKSKARLAFNFPAKGRAGDQLKIAIKYLTERVAFCADLPLEQMPTRLASIPLPYDSLDATSRFHVLCAC-------------------------REGDLFGDEYLSVAVKHVLGIPFRTATVMTRTAPCELLVVPARECRRLRAFVALRNSEKAMAIFDKFFINLPKGVCSEIASLATFRTIKMNQKLAEDGDEVSTVFFVVRGECVSKSSKQFHRQPGTGKEEEEAQRYGPGDIVGW---------------------------EQGVQMAVEGVP-----------KRRTK-------------------------------QPRLGSVARYIAYTHKQKLQGPSSLSHSGGLGDDESLDGESELGEFFSGHGGCDRNAPTLFSGGGTWKDQRKTGKMSPPVTRLR-----------TVIPTEECESRRPNTAASPVGVQALLDGISSRDNWPRXXXXXXXXXXXRVGLTDSTADPISTAPQGTHKLRRSLQSAPSSXXXXXXPVIWGYARVAGRGIDGHGDEAEARGGRCSCPMESCRVCTPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTMRNTGTIAQTKATTDTPGNTLSLELKRSTSRPGLTPYVHHAGKAHVIHPTGGKAAGDEAFGGKSTLWGGWGLPSSKIGGTGNGVVAKGGDGAHGGTSTSGNKLAKGAHVGFHDRRTSPAGQGGAVIAVADAPVTAAVAPMSDFGVTNTSLGRGDRREPDSGSEISLPPAAAILPPDQPHLARLSYTLVQLSTRAALDPSEPSANLCLRILGSFACEKKATTRVSNLYRSILPPSSV-------STAKYTSQSRL 956

The following BLAST results are available for this feature:

BLAST of Ec-28_000140.2 vs. uniprot

BLAST of Ec-28_000140.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FIG1_ECTSI	0.000e+0	99.90	Cyclic nucleotide-binding domain-containing protei...	[more]
A0A6H5L5Z7_9PHAE	0.000e+0	74.43	Cyclic nucleotide-binding domain-containing protei...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 56..203 e-value: 1.2E-5 score: 27.1
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 221..362 e-value: 3.1E-6 score: 28.7
None	No IPR available	PANTHER	PTHR23011	UNCHARACTERIZED	coord: 270..423
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 57..128 score: 10.428
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 57..128
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 372..457
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 231..354

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:183226..201092 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000140.2	Ec-28_000140.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_28 181764..201092 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-28_000140.2 ID=Ec-28_000140.2|Name=Ec-28_000140.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=2097bp
MLYLTLEDDPFPDQEYDEEALLELVRSVARRDGDDRTVSELIRFQDALER
LGLLWTPLDSLDKHQAHELVRNLHLELTAPGDMVYLKHSPAMRSYVVLRG
TVLLTNNVLDREGAEGVRVLGAGQEFGQPLEPDLDGDKPVEDFLEYAKTP
HLELLHDSGGDVATTTRGGGRKDGRAELLVIGRQDWISTLQTCRSQFTNT
TDKYDASKEPDHLKSKARLAFNFPAKGRAGDQLEIAIKYLTERVAFCADL
PLEQVAAMAAAIELRGLTVPGRHVFRRGRECFGEAYIMFTGTADQIGGDK
SGDRLITEGDLFGDEYFSVAVKDVLGIPFRTATVMTRTAPCELLVVPARE
CRRLRAFVALRNSEKAMAIFDKFFINLPRGVCSEIASLATFRTIKMNQKL
AEDGDEVSTVFFVVRGECVSKSSKQLHQQPGKGHEEEEAQRYGPGDIVGW
PYLMPRPPARGRSPIVARTAAITTTPQKTAIGGSAEDKPNTPPEGNEQER
KRRSRRNAKEWHCSITVTTPAQVLSVPLAALLSFLSERAMKGLRRYIAHT
HKQKLEGPSSSSHSGGLGDEESLDGESELGEFFSGHGGYDRNAPTLFSGG
GTWKDQRKTGRMSPPVARLRPSTAPELIALKTAIQSEECESRRPNITVLP
GGVHALIEGISSRDNWPRPRPSTRTRWRWRVGLTDSIADRISTAPQGIHN
LRRSLQSAPSSSSSSPPVIWGYARVAERGIGGHGDEAEARGGRCSCPMES
CRVCSPLDRLERLRNTTIWTPSLPSRSTKPASAPSAVARSFASGCTTRNI
GTIAQMKATTDTPGNTLSVELKASTFRPATRPYVHHAGKAHVAHPTGGIA
AGDEAFGGKPTLWGGWGLPSSKIGGTGHGAVAKGSDGAHGGTSTSGNKLA
GGAHVGFHDRRTSPAGQGGAVIAVADAPATAAVAPMSDFGVTNTSLGRGA
RREPDSGSEMSLPPAAATLPPDQPHLARLSYTLVQLSTRAALDPHEPLAN
LCLRILGSFACEKEATTRVSNLYRSILPPSSIVWLPCQGSTARWKDQLAL
TSSCSDHLFLLCKGIPVGRLSFNLLQENGTQGRGDDTQKSSDIDHGSRFS
SGSSSLGRFPSTSSGISTSSSSSSSSSSNDASIHLDNPGGVGRGYDSSIP
AVFKAKGQQFALAFTPSADRVETEWAQHQRKVLASEQRAQAAAGPRMAAA
KASDTAQPRERDAESAGWASRAEDSRNGSGNSSSCNSNGSYGSVSQLDPL
DPQEGLSSGREEGSRGVDTDGIVTVNGDGYAEAAVSGDSERDCGESHTRA
DGVAAAEQDELAVEGVGGSGLVADHVDDETQGGAAVGTEAGGSTGTTESV
KTTQQDADSRREDKARDDNVGGAKGDEGTNEAKQDTGLSVFPGAFFDELL
DMSDTESPDDSGINSSWKTNGHNRGAEGTGSFLEDDKSSGSCVGGGVDLD
GASRGTCAVLPWIVSRLGLLEQVEGCYESEAKAFKKAVEILEGKEAALSS
THMSGPLLNQDSEEQEQSVPARPPEQQHPANPLDDNRACIVPLYRWISLG
DGGISAAEAAIGSRSISDPSEWRRAGVDPFSVWAEQRARSLRKNLYNLLR
AAGPREIRSRCGFATAEDGEGRSKRGKRSGRFIEGGDGGGDGGGSVGGGV
GGRDFRSLGRKKAEKEAVQSARTAILRQNQRLIQTETNVRRRLRKHSTID
TSIARQQQQLQQQPTQPHAQHANASKKESGSIGNSRLQARQGTLEDSGSV
EGAARRLGLGGAQGGGADGGPASKELRHKLRVQMNIERKRALLFEDIQKL
PYIGKIQGINSTKGSNISGRNAGRFPESRNTRSIGESPQKTKVIGSSPPA
IVLRAPKVQAQTRLHGKPASSFFARANAAAGAALAVKAAAGALDGDRSRS
SPSTCSCCSSSLPSPRPSRIEQQGGLKVTALADTGAVPHQAQTGTNANTS
VASPASAECAANNVGAFTRAWGSYVSNASDEQNTAADSGSLLGATIFSVN
NEDGKTYARSSNSSKPRATRSATALRGNANSAGSRGASRQALRGADGWST
TRVPPGVCSLDGELMLLDGILHDRKVRTWVETTLVPPRKRHHHVHV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014710	RmlC-like_jellyroll
IPR000595	cNMP-bd_dom
IPR018490	cNMP-bd-like