Ec-27_006340.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_006340.2
Unique NameEc-27_006340.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length145
Homology
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BLAST of Ec-27_006340.2 vs. uniprot
Match: D8LAU6_ECTSI (rRNA-processing protein EFG1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAU6_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.010e-55
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 
Query:   42 DVTREDAPAGKTVVAAGGGAVDGVTSRVDGGVNGGEGGLLLVDGARDEDSPRATKDPRVKRTQQAPGGHGYRTGVAAGEGGEGLQAPEGPHLAAEAEGEGEEQ 144
            DVTREDAPAGKTVVAAGGGAVDGVTSRVDGGVNGGEGGLLLVDGARDEDSPRATKDPRVKRTQQAPGGHGYRTGVAAGEGGEGLQAPEGPHLAAEAEGEGEEQ
Sbjct:  480 DVTREDAPAGKTVVAAGGGAVDGVTSRVDGGVNGGEGGLLLVDGARDEDSPRATKDPRVKRTQQAPGGHGYRTGVAAGEGGEGLQAPEGPHLAAEAEGEGEEQ 582
The following BLAST results are available for this feature:
BLAST of Ec-27_006340.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LAU6_ECTSI1.010e-55100.00rRNA-processing protein EFG1 n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5850464..5850898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006340.2Ec-27_006340.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 5847766..5854421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_006340.2 ID=Ec-27_006340.2|Name=Ec-27_006340.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=145bp
MRIAGMTLTSRTTSSWKRREAGTKSKPTKRGSTLPVKTHAPDVTREDAPA
GKTVVAAGGGAVDGVTSRVDGGVNGGEGGLLLVDGARDEDSPRATKDPRV
KRTQQAPGGHGYRTGVAAGEGGEGLQAPEGPHLAAEAEGEGEEQ*
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