Ec-27_006320.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ec-27_006320.1
Unique Name	Ec-27_006320.1
Type	polypeptide
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	314

Homology

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BLAST of Ec-27_006320.1 vs. uniprot
Match: D8LAU9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU9_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 2.830e-189
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0

Query:   19 MGFQATAFSSPIRANKPLQRPXXXXXXXXXXXXLGVGGWLSSPPRAISRTSSSRRRPHRPYASLFDSGDENNARDDSPNPGNADSQGEAPESESAPSSPDGGAKPVPRADEQLTGSLADAGATGEGPPQAEGEAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGFADSNQVEDGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTYDALPLPATPPTDSDLVV 313
            MGFQATAFSSPIRANKPLQRPXXXXXXXXXXXXLGVGGWLSSPPRAISRTSSSRRRPHRPYASLFDSGDENNARDDSPNPGNADSQGEAPESESAPSSPDGGAKPVPRADEQLTGSLADAGATGEGPPQAEGEAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGFADSNQVEDGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTYDALPLPATPPTDSDLVV
Sbjct:    1 MGFQATAFSSPIRANKPLQRPXXXXXXXXXXXXLGVGGWLSSPPRAISRTSSSRRRPHRPYASLFDSGDENNARDDSPNPGNADSQGEAPESESAPSSPDGGAKPVPRADEQLTGSLADAGATGEGPPQAEGEAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGFADSNQVEDGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTYDALPLPATPPTDSDLVV 295

[Close]

BLAST of Ec-27_006320.1 vs. uniprot
Match: A0A836C767_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C767_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 1.820e-11
Identity = 59/171 (34.50%), Postives = 88/171 (51.46%), Query Frame = 0

Query:  164 VDWDKAWASTRQRM-------EREKRAA----------PAFSGRKQVVATKNEDGGYDFEEISADGSSRMRGDKGRGGFGF-ADSNQVEDGPGGIRRKEQEAVNFATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTY--DALPLPATPP-TDSDLVV 313
            VDWD AWA+ ++ M       +   RA           PAF+GRK+++ T N++ GY + EI A G     G+   GGF    DS Q++D    I  KE++ V     +Q F    A++   L F + V M+GGI++G++RF+D+  P      A+P P+     D DLVV
Sbjct:  115 VDWDGAWAAKQKEMGNGDSGSDDSARAVEPXXXXXVSRPAFAGRKEIIVTGNKEEGYTYTEIDASGRVSRAGEA-DGGFRLDEDSPQLKDARRRIIEKEEQLVEAVAFDQVFVVGGALIAVLLAFMINVGMTGGISDGASRFRDVELPVNGVPPAVPHPSNQVYPDDDLVV 284

The following BLAST results are available for this feature:

BLAST of Ec-27_006320.1 vs. uniprot

BLAST of Ec-27_006320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LAU9_ECTSI	2.830e-189	100.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836C767_9STRA	1.820e-11	34.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..27
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 277..313
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..27
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 256..276
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 28..255
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	SUPERFAMILY	101447	Formin homology 2 domain (FH2 domain)	coord: 41..50
None	No IPR available	TMHMM	TMhelix		coord: 258..280

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_27	contig	chr_27:5836283..5838466 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-27_006320.1	Ec-27_006320.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	mRNA	chr_27 5835752..5839909 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ec-27_006320.1 ID=Ec-27_006320.1|Name=Ec-27_006320.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=314bp
MRALCFLPSNAGVGLQAGMGFQATAFSSPIRANKPLQRPPPPPPPPPPPP
PLGVGGWLSSPPRAISRTSSSRRRPHRPYASLFDSGDENNARDDSPNPGN
ADSQGEAPESESAPSSPDGGAKPVPRADEQLTGSLADAGATGEGPPQAEG
EAAAAGEGAEEEQVDWDKAWASTRQRMEREKRAAPAFSGRKQVVATKNED
GGYDFEEISADGSSRMRGDKGRGGFGFADSNQVEDGPGGIRRKEQEAVNF
ATTNQAFAGLFAILLASLIFEVYVYMSGGITNGSTRFQDMGQPTTYDALP
LPATPPTDSDLVV*