Ec-27_006000.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_006000.1
Unique NameEc-27_006000.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length68
Homology
[Close]
BLAST of Ec-27_006000.1 vs. uniprot
Match: A0A6H5JNQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNQ3_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 8.270e-40
Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0 
Query:    1 MSSQNRSKMGKAFAKMTTACPQQIAGYGTCLQAASTAGMLERGVCDEQFKALKRCFQQAAKGLKATR 67
            MSSQNRSKMG+AFAKMTTACPQQIAGYGTCLQAASTAGMLERGVCDEQFKALKRCFQQAAKGLKATR
Sbjct:    1 MSSQNRSKMGQAFAKMTTACPQQIAGYGTCLQAASTAGMLERGVCDEQFKALKRCFQQAAKGLKATR 67
[Close]
BLAST of Ec-27_006000.1 vs. uniprot
Match: A0A0S4IW01_BODSA (Uncharacterized protein n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IW01_BODSA)

HSP 1 Score: 46.2 bits (108), Expect = 5.620e-5
Identity = 22/56 (39.29%), Postives = 31/56 (55.36%), Query Frame = 0 
Query:    6 RSKMGKAFAKMTTACPQQIAGYGTCLQAASTAGMLERGVCDEQFKALKRCFQQAAK 61
            +SK G+A  K    CP + A Y  C+ A      +ERG CDE+ KAL++C  +  K
Sbjct:   19 KSKFGQALTK----CPTESATYAKCIDARQVNRTMERGCCDEERKALRKCVDKHTK 70
The following BLAST results are available for this feature:
BLAST of Ec-27_006000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNQ3_9PHAE8.270e-4098.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0S4IW01_BODSA5.620e-539.29Uncharacterized protein n=1 Tax=Bodo saltans TaxID... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5612451..5614728 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_006000.1Ec-27_006000.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 5612451..5614728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_006000.1 ID=Ec-27_006000.1|Name=Ec-27_006000.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=68bp
MSSQNRSKMGKAFAKMTTACPQQIAGYGTCLQAASTAGMLERGVCDEQFK
ALKRCFQQAAKGLKATR*
back to top