Ec-27_005970.2 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_005970.2
Unique NameEc-27_005970.2
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length1048
Homology
BLAST of Ec-27_005970.2 vs. uniprot
Match: D8LAY5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY5_ECTSI)

HSP 1 Score: 1475 bits (3819), Expect = 0.000e+0
Identity = 895/971 (92.17%), Postives = 895/971 (92.17%), Query Frame = 0
Query:    1 MPIRELSAELVSEIVESYGQITKLNLATNDISRVENLERLTRLSNLDLFCNRLGSVPGSLDGLALXXXXXXXXXXXXXXXXXXXXXXXPASLLRLNVANNSIAGVDQVSYLAPLSALTELVLAGNPLAAEDGYRGRILRALPSLTALDNAPRDQHRYDQHEGAGKADGSPTPPVPTSAPADTTVRSTSVGSHPTVPMGHPPPSKFSHPPSPAADSAAPPAPLSDASDHDVAGAVMSSLAAEKRGPEDVSGKSPSAEPDSALPVPGSSGSMPAGAAGMAETERESRQVEEQRGRGSTAETGDPGEIAAGAVSAGRAGTGWVVPLPSSQLAGEGRGLLLQADARAVTRAGMPVGATSATLALRQSGIGNWEAIGGVCSDIGADSRSGYETVAAAPSEEPVAPPDAVHDGGGLPESRLAVETARAAVGVLGRRQHETAVPDRGTDHLSEVEAVASDGPHARSDMLPGVPTSVDPPMGTHLPIAESEARGVPPPVLSGDNRVSVDEGSGWAANGAPPPHRRLSGVGSSWESSLEGEHLLGFGYDYLGSAAGAGGTGNARTTGGDRSETVRYGAALSGDRRQVLLAPEAAAFTALGGRGDFEGGHAAHPADSGSGVVDCRVVSFGKETGHDGQNRFDRHPSAQLPGAGYSARRGGPVVGLVGGPKQHRTGLVEYSLGLGREGEGVLKPLPRSAVPLKTGTWGEVPPEVQPRRQAGGHAGGKAAVGGEREVAMVDSGEWEALRRENEDLRRQVALSEKRCGALSEMQRLADDALAATHPLPFCSPPAGTTAPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVARLLAAWRAEVLKLLLQRGVDAEVAAEESREARREVVEAREARARAETEAKSLTQRALAAEAEAELSGIKLTRAFEELREERTGRCAGEASSAGYSVAVRDLHEWVQGFLGRASEGVFEREALLAR 971
            MPIRELSAELVSEIVESYGQITKLNLATNDISRVENLERLTRLSNLDLFCNRLGSVPGSLDGLALXXXXXXXXXXXXXXXXXXXXXXXPASLLRLNVANNSIAGVDQVSYLAPLSALTELVLAGNPLAAEDGYRGRILRALPSLTALDNA                                                                            DHDVAGAVMSSLAAEKRGPEDVSGKSPSAEPDSALPVPGSSGSMPAGAAGMAETERESRQVEEQRGRGSTAETGDPGEIAAGAVSAGRAGTGWVVPLPSSQLAGEGRGLLLQADARAVTRAGMPVGATSATLALRQSGIGNWEAIGGVCSDIGADSRSGYETVAAAPSEEPVAPPDAVHDGGGLPESRLAVETARAAVGVLGRRQHETAVPDRGTDHLSEVEAVASDGPHARSDMLPGVPTSVDPPMGTHLPIAESEARGVPPPVLSGDNRVSVDEGSGWAANGAPPPHRRLSGVGSSWESSLEGEHLLGFGYDYLGSAAGAGGTGNARTTGGDRSETVRYGAALSGDRRQVLLAPEAAAFTALGGRGDFEGGHAAHPADSGSGVVDCRVVSFGKETGHDGQNRFDRHPSAQLPGAGYSARRGGPVVGLVGGPKQHRTGLVEYSLGLGREGEGVLKPLPRSAVPLKTGTWGEVPPEVQPRRQAGGHAGGKAAVGGEREVAMVDSGEWEALRRENEDLRRQVALSEKRCGALSEMQRLADDALAATHPLPFCSPPAGTTAPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVARLLAAWRAEVLKLLLQRGVDAEVAAEESREARREVVEAREARARAETEAKSLTQRALAAEAEAELSGIKLTRAFEELREERTGRCAGEASSAGYSVAVRDLHEWVQGFLGRASEGVFEREALLAR
Sbjct:    1 MPIRELSAELVSEIVESYGQITKLNLATNDISRVENLERLTRLSNLDLFCNRLGSVPGSLDGLALXXXXXXXXXXXXXXXXXXXXXXXPASLLRLNVANNSIAGVDQVSYLAPLSALTELVLAGNPLAAEDGYRGRILRALPSLTALDNA----------------------------------------------------------------------------DHDVAGAVMSSLAAEKRGPEDVSGKSPSAEPDSALPVPGSSGSMPAGAAGMAETERESRQVEEQRGRGSTAETGDPGEIAAGAVSAGRAGTGWVVPLPSSQLAGEGRGLLLQADARAVTRAGMPVGATSATLALRQSGIGNWEAIGGVCSDIGADSRSGYETVAAAPSEEPVAPPDAVHDGGGLPESRLAVETARAAVGVLGRRQHETAVPDRGTDHLSEVEAVASDGPHARSDMLPGVPTSVDPPMGTHLPIAESEARGVPPPVLSGDNRVSVDEGSGWAANGAPPPHRRLSGVGSSWESSLEGEHLLGFGYDYLGSAAGAGGTGNARTTGGDRSETVRYGAALSGDRRQVLLAPEAAAFTALGGRGDFEGGHAAHPADSGSGVVDCRVVSFGKETGHDGQNRFDRHPSAQLPGAGYSARRGGPVVGLVGGPKQHRTGLVEYSLGLGREGEGVLKPLPRSAVPLKTGTWGEVPPEVQPRRQAGGHAGGKAAVGGEREVAMVDSGEWEALRRENEDLRRQVALSEKRCGALSEMQRLADDALAATHPLPFCSPPAGTTAPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVARLLAAWRAEVLKLLLQRGVDAEVAAEESREARREVVEAREARARAETEAKSLTQRALAAEAEAELSGIKLTRAFEELREERTGRCAGEASSAGYSVAVRDLHEWVQGFLGRASEGVFEREALLAR 895          
BLAST of Ec-27_005970.2 vs. uniprot
Match: A0A6H5JXJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXJ1_9PHAE)

HSP 1 Score: 1118 bits (2893), Expect = 0.000e+0
Identity = 654/784 (83.42%), Postives = 679/784 (86.61%), Query Frame = 0
Query:  235 MSSLAAEKRGPEDVSGKSPSAEPDSALPVPGSSGSMPAGAAGMAETERESRQVEEQRGRGSTAETGDPGEIAAGAVSAGRAGTGWVVPLPSSQLAGEGRGLLLQADARAVTRAGMPVGATSATLALRQSGIGNWEAIGGVCSDIGADSRSGYETVAAAPSEEPVAPPDAVHDGGGLPESRLAVETARAAVG---VLGRRQHETAVPDRGTDHLSEVEAVASDGPHARSDMLPGVPTSVDPPMGTHLPIAESEARGVPPPVLSGDNRVSVDEGSGWAANGAPPPHRRLSGVGSSWESSLEGEHLLGFGYDYLGSAAGAGGTGNARTTGGDRSETVRYGAALSGDRRQVLLAPEAAAFTALGGRGDFEGGHAAHPADSGSGVVDCRVVSFGKETGHDGQNRFDRHPSAQLPGAGYSARRGGPVVGLVGGPKQHRTGLVEYSLGLGREGEGVLKPLPRSAVPLKTGTWGEVPPEVQPRRQAGGHAGGKAAVGGEREVAMVDSGEWEALRRENEDLRRQVALSEKRCGALSEMQRLADDALAATHPLPFCSPPAGTTAPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVARLLAAWRAEVLKLLLQRGVDAEVAAEESREARREVVEAREARARAETEAKSLTQRALAAEAEAELSGIKLTRAFEELREERTGRCAGEASSAGYSVAVRDLHEWVQGFLGRASEGVFEREALLARWGALRAGFYCSSHLGDTAAAVFPCQRKSRARVGAREARQRKAGG 1015
            M SLA E+R PEDVSGKSPSA+PDSALPVPGSSGSMPAGAAGM+ETER+SRQ+EE    GSTA+TGDP E+AAG VSAGRAGTGWV+PLPSSQLAGEGRGLLLQADARAV R GMPVGATSA LA RQSG+GN EAIG VCSDIG ++RSG+ET A  PSEEPVAPPDAVHDGGGLPESRLAVETARAA     VLGRRQHETAVPDR T HLSEVEAVA DGPH +S+M+P V TSV+PP GTHLPI ESEAR  PP  LSGDNR SVDE SGW ANGAPPPH RLSGVGSSWESSLEGEHLLGF YD LGSAAGAGGTGNARTTGGDRSE V YG ALS DRRQVLLAPEAAA TALG RGD EGGHAA PADSGS VVD RV SFG+ETGHDGQNRFDRHP AQL GAG +ARRGGPVVGLVG PKQH T LVE SLG+GREG+GVLKP PRSAVPLKTGTWGE PPEVQPRRQAGGHAGGKAA+GGEREVA+VD GEWEALRREN+DLRRQVALSEKRCGALSEMQRLADDALAATHPLPF SPPAGT APER                         XXXX  XXXXXXXXXXXXXXXXXXXXXXXAAVARLLAAWRAEVLKLLLQRGVDAEVAAEESREARREVV+ARE R RAETEAKSLTQRALAAEAEAELSGIKLTR  EELREERTGRCA EASSAGYSVAVRDLHEWVQGFLGRASEGVFEREALLARWGALRAGF CSS LG  AAAV PCQR  RAR G+REARQRKAGG
Sbjct:    1 MLSLAVEQREPEDVSGKSPSAQPDSALPVPGSSGSMPAGAAGMSETERKSRQMEEL---GSTADTGDPSEVAAGGVSAGRAGTGWVIPLPSSQLAGEGRGLLLQADARAVARVGMPVGATSAALASRQSGVGNREAIGAVCSDIGVENRSGHETAAVTPSEEPVAPPDAVHDGGGLPESRLAVETARAADSADRVLGRRQHETAVPDRDTIHLSEVEAVAGDGPHTQSEMMPDVSTSVEPPTGTHLPITESEARWGPP-ALSGDNRSSVDERSGWTANGAPPPHPRLSGVGSSWESSLEGEHLLGFRYDCLGSAAGAGGTGNARTTGGDRSEIVSYGTALSSDRRQVLLAPEAAASTALGERGDSEGGHAARPADSGSAVVDRRVASFGEETGHDGQNRFDRHPPAQLLGAGLTARRGGPVVGLVGRPKQHGTRLVEDSLGVGREGKGVLKPPPRSAVPLKTGTWGEAPPEVQPRRQAGGHAGGKAAIGGEREVAVVDRGEWEALRRENDDLRRQVALSEKRCGALSEMQRLADDALAATHPLPFSSPPAGTMAPERPSPPRQEATDGVLSLASSVEEGEERXXXXCAXXXXXXXXXXXXXXXXXXXXXXXAAVARLLAAWRAEVLKLLLQRGVDAEVAAEESREARREVVQAREERTRAETEAKSLTQRALAAEAEAELSGIKLTRTSEELREERTGRCAAEASSAGYSVAVRDLHEWVQGFLGRASEGVFEREALLARWGALRAGFCCSSPLGGRAAAVVPCQRHIRARAGSREARQRKAGG 780          
BLAST of Ec-27_005970.2 vs. uniprot
Match: A0A7S2WRQ8_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WRQ8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.050e-5
Identity = 47/154 (30.52%), Postives = 69/154 (44.81%), Query Frame = 0
Query:    3 IRELSAELVSEIVESYGQITKLNLATNDISRVENLERLTRLSNLDLFCNRLGSVP-------GSLDGLALXXXXXXXXXXXXXXXXXXXXXXXPASLLRLNVANNSIAGVDQVSYLAPLSA-LTELVLAGNPLAAEDGYRGRILRALPSLTALD 148
            I  LS  L+  I  +YG ++ L+L+ N I ++ENL++L  L  LDL CN +  +          L+ + L                       P    RLN++ N I  +  +  L  LS  L +LVL G PL+++  YR RI    P L  LD
Sbjct:    5 IAALSPALIERIKSTYGDLSVLDLSNNRIEKIENLQKLGSLKELDLSCNAVRYLCLYDLRALEQLESINLSRNEISFVSSGRPGLDYHVLQLPPVK--RLNLSLNPIRELKDLHGLDVLSGTLEDLVLQGTPLSSQLDYRTRIATRFPWLKRLD 156          
BLAST of Ec-27_005970.2 vs. uniprot
Match: A0A0L0DEI4_THETB (Leucine-rich repeats and guanylate kinase domain containing n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DEI4_THETB)

HSP 1 Score: 57.0 bits (136), Expect = 9.980e-5
Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 0
Query:   92 LLRLNVANNSIAGVDQVSYLAPLSALTELVLAGNPLAAEDGYRGRILRALPSLTALD 148
            L  ++   N I  V+QV++LAPL  L ++ LAGNP+AA++GYR R L  +P L  LD
Sbjct:  212 LFEVDAGGNFIKDVEQVAHLAPLPLLRKVTLAGNPMAADEGYRTRTLFLVPQLAYLD 268          
The following BLAST results are available for this feature:
BLAST of Ec-27_005970.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LAY5_ECTSI0.000e+092.17Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JXJ1_9PHAE0.000e+083.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WRQ8_9STRA4.050e-530.52Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A0L0DEI4_THETB9.980e-547.37Leucine-rich repeats and guanylate kinase domain c... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 867..908
NoneNo IPR availableCOILSCoilCoilcoord: 733..753
NoneNo IPR availablePFAMPF14580LRR_9coord: 60..149
e-value: 8.0E-8
score: 32.0
NoneNo IPR availablePANTHERPTHR45973FAMILY NOT NAMEDcoord: 16..929
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 18..153
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 9..165
e-value: 2.6E-29
score: 103.4
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 68..89
score: 7.835
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 20..41
score: 7.643
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 42..64
score: 6.31
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 91..112
score: 5.833

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:5586338..5593509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_005970.2Ec-27_005970.2Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 5581491..5593576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_005970.2 ID=Ec-27_005970.2|Name=Ec-27_005970.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1048bp
MPIRELSAELVSEIVESYGQITKLNLATNDISRVENLERLTRLSNLDLFC
NRLGSVPGSLDGLALLTRLKDLDISENSITSLQPLLSAPASLLRLNVANN
SIAGVDQVSYLAPLSALTELVLAGNPLAAEDGYRGRILRALPSLTALDNA
PRDQHRYDQHEGAGKADGSPTPPVPTSAPADTTVRSTSVGSHPTVPMGHP
PPSKFSHPPSPAADSAAPPAPLSDASDHDVAGAVMSSLAAEKRGPEDVSG
KSPSAEPDSALPVPGSSGSMPAGAAGMAETERESRQVEEQRGRGSTAETG
DPGEIAAGAVSAGRAGTGWVVPLPSSQLAGEGRGLLLQADARAVTRAGMP
VGATSATLALRQSGIGNWEAIGGVCSDIGADSRSGYETVAAAPSEEPVAP
PDAVHDGGGLPESRLAVETARAAVGVLGRRQHETAVPDRGTDHLSEVEAV
ASDGPHARSDMLPGVPTSVDPPMGTHLPIAESEARGVPPPVLSGDNRVSV
DEGSGWAANGAPPPHRRLSGVGSSWESSLEGEHLLGFGYDYLGSAAGAGG
TGNARTTGGDRSETVRYGAALSGDRRQVLLAPEAAAFTALGGRGDFEGGH
AAHPADSGSGVVDCRVVSFGKETGHDGQNRFDRHPSAQLPGAGYSARRGG
PVVGLVGGPKQHRTGLVEYSLGLGREGEGVLKPLPRSAVPLKTGTWGEVP
PEVQPRRQAGGHAGGKAAVGGEREVAMVDSGEWEALRRENEDLRRQVALS
EKRCGALSEMQRLADDALAATHPLPFCSPPAGTTAPERPPPPRQEATDGA
LSPASSAEEGEERRRERCATGEGGDEDGEAASGGGGGWGGGQAAVARLLA
AWRAEVLKLLLQRGVDAEVAAEESREARREVVEAREARARAETEAKSLTQ
RALAAEAEAELSGIKLTRAFEELREERTGRCAGEASSAGYSVAVRDLHEW
VQGFLGRASEGVFEREALLARWGALRAGFYCSSHLGDTAAAVFPCQRKSR
ARVGAREARQRKAGGLESVGASSCSLSSGFYLNLRLVILENPSLSFD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt