Ec-27_004590.4 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-27_004590.4
Unique NameEc-27_004590.4
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length649
Homology
BLAST of Ec-27_004590.4 vs. uniprot
Match: D8LBA9_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBA9_ECTSI)

HSP 1 Score: 940 bits (2429), Expect = 0.000e+0
Identity = 568/648 (87.65%), Postives = 568/648 (87.65%), Query Frame = 0
Query:    1 MAPQHVRSLGESRRDRPXXXXXXXXXXXXXXXAAASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAARDVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAARQEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYLRSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPSCSIVAASMAFAANQPFRAPPVASAAETAHHLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGHLSGKGSGSSGAVRFSSAAGSSTGGEMYATGSGRGGDGEKNSSTINDDGGSCSAKQSLPTSSTDAAGESAAAPPVAGSPRTAAGEGTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRGEPQLTYHFLRGSIGAFVLLLLSTPPVTFRSSRVCCARVLRSPSKTFRL 648
            MAPQHVRSLGESRRDRPXXXXXXXXXXXXXXX AASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAARDVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAARQEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYLRSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPSCSIVAASMAFAANQPFRAPPVASAAETAHHLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GGHLSGKGS                                                                              GTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRGEPQLTYHFLRGSIGAFVLLLLSTPPVTFRSSRVCCARVLRSPSKTFRL
Sbjct:   63 MAPQHVRSLGESRRDRPXXXXXXXXXXXXXXXXAASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAARDVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAARQEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYLRSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPSCSIVAASMAFAANQPFRAPPVASAAETAHHLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHLSGKGSXXXXXXXXXX---------------------------------------------------------XXXXXXXXXXXGTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRGEPQLTYHFLRGSIGAFVLLLLSTPPVTFRSSRVCCARVLRSPSKTFRL 653          
BLAST of Ec-27_004590.4 vs. uniprot
Match: A0A6H5KC71_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC71_9PHAE)

HSP 1 Score: 855 bits (2208), Expect = 2.190e-306
Identity = 469/600 (78.17%), Postives = 492/600 (82.00%), Query Frame = 0
Query:    2 APQHVRSLGESRRDRPXXXXXXXXXXXXXXXAAASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAARDVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAARQEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYLRSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPSCSIVAASMAFAANQPFRAPPVASAAETAHHLVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGHLSGKGSGSSGAVRFSSAAGSSTGGEMYATGSGRGGDGEKNSSTINDDGGSCSAKQSLPTSSTDAAGESAAAPPVAGSPRTAAGEGTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRGE 601
            APQHVRSLGESRR+ PXXX            A ASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGG +GWV +RHTSGKG  ASSAARDVR LGESRRNSPPPPSFSIAPPTALTAAASTAIAMA+RHQEELA+HAARQEAQD QAA  +K CGVGCGHN EGD +GWVNIRDVSGRGMGVS+AA+YLRSL ESR+ RRSPLVS APPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGG+HGEGD+ SWVDIRDA+GKGTG SS ARRS  S S+ A  +AFAANQ F APP ASA  TAHHL                                                GGGHLSGK SG SGA+R SSAA +STG EMYATGSGRGGDGEKNSSTIN D GSCSA QSLPTSS DAAGESAAAPPVAGS RTA G+ TDGK AHLERAG Q+PKSGTRKPA KRHPWGGKDWAGHP+SKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGE+ CCDECPRVFH GCLRVRLNSQQAAAGQTT +TWHCPVCTEGRGNQSGRRG+
Sbjct:   64 APQHVRSLGESRRNTPXXXPFGITPPHALT-ATASTALAVAHRDRAAHAACQPARGPLATSTVFGHYPACGHHADGGDVGWVGIRHTSGKGKAASSAARDVRSLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAFRHQEELASHAARQEAQDAQAAVNVKTCGVGCGHNAEGDEIGWVNIRDVSGRGMGVSSAAQYLRSLGESRRIRRSPLVSTAPPTALTAAASTALAVAYRDQLAAHAARQAARVPLAASTMNVFGHYPGGGYHGEGDNISWVDIRDADGKGTGGSSVARRSDLSFSMAAVPIAFAANQSFGAPPAASATVTAHHL------------------------------------------------GGGHLSGKASGPSGAIRLSSAARNSTGSEMYATGSGRGGDGEKNSSTINGDDGSCSATQSLPTSSIDAAGESAAAPPVAGSARTAEGKETDGKSAHLERAGAQSPKSGTRKPAHKRHPWGGKDWAGHPISKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGEVICCDECPRVFHPGCLRVRLNSQQAAAGQTTADTWHCPVCTEGRGNQSGRRGK 614          
BLAST of Ec-27_004590.4 vs. uniprot
Match: A0A6H5JJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY6_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 1.260e-23
Identity = 51/98 (52.04%), Postives = 66/98 (67.35%), Query Frame = 0
Query:  494 KRHPWGGKDWAGHPLSKKLQKHVKENDKAWRM-QGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE 590
            KR PWGGKDWAG P S+ ++  +      W + Q G ++G DG+HFFCS CG  G+LTCCDECPRVFH  CL +  +S  AA  QT ++ W+CP CT+
Sbjct:  740 KRSPWGGKDWAGKPASQAVKDDLLAEVSLWSVAQDGTLVGEDGNHFFCSACGESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSCTD 837          
BLAST of Ec-27_004590.4 vs. uniprot
Match: D7FHY8_ECTSI (Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 6.900e-23
Identity = 57/118 (48.31%), Postives = 73/118 (61.86%), Query Frame = 0
Query:  494 KRHPWGGKDWAGHPLSKKLQKHVKENDKAWRM-QGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE-GRGNQSG----RRGEPQLT 605
            KR PWGGKDWAG   S+ ++  +      W + Q G ++G DG+HFFCS CG  G+LTCCDECPRVFH  CL +  +S  AA  QT ++ W+CP CT+ GR N       R+ EP  T
Sbjct:  840 KRSPWGGKDWAGKAASQAVKDELLAEVSLWSIAQDGTLVGEDGNHFFCSACGESGDLTCCDECPRVFHEECLPIGTDSHLAANRQTEEDPWYCPSCTDAGRVNLIAGDLHRKKEPNWT 957          
BLAST of Ec-27_004590.4 vs. uniprot
Match: D7FI07_ECTSI (GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI07_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.700e-22
Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 0
Query:  492 AQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRM-QGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE-GRGNQSGRRGEPQLT 605
            A+KR  WGGKDW G  +S+  +  +      W + Q G ++G DG+HFFCSVCG  G++TCCD+CPRVFH  CL +  +S  AA  QT  + W+CP CT+ GR N    R EP  T
Sbjct:  265 AKKRSAWGGKDWGGQAVSQGAKDEILAGVSLWSVSQDGTLVGEDGNHFFCSVCGESGDITCCDQCPRVFHEECLPIGTDSHLAAHHQTEKDPWYCPSCTDAGRVNLVAGR-EPDWT 379          
BLAST of Ec-27_004590.4 vs. uniprot
Match: A0A6H5L4S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S9_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.360e-21
Identity = 65/145 (44.83%), Postives = 83/145 (57.24%), Query Frame = 0
Query:  471 GKPAHLERAGTQAP-KSGTRKP-AQKRHPWGGKDWAGHPLSKKLQKHVKENDKAWRM-QGGIMMGADGSHFFC------SVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE-GRGNQSGRRGEPQLT 605
            G  A + R G   P K+G  K  A+KR  WGGKDW G  +S++ +  +      W + Q G ++G DG+HFFC      SVCG  G++TCCDECPRVFH  CL +  NS  AA  QT  + W+CP CT+ GR N    R EP  T
Sbjct:  228 GATASVPRCGRAGPTKAGKGKGRAKKRSAWGGKDWGGQAVSQRAKDEILAGVSLWSVSQDGTLVGEDGNHFFCRWARDRSVCGESGDITCCDECPRVFHEECLPIGTNSHLAAHHQTEKDPWYCPSCTDAGRVNLVAGR-EPNWT 371          
BLAST of Ec-27_004590.4 vs. uniprot
Match: A0A1X2GIB6_9FUNG (PHD-type domain-containing protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GIB6_9FUNG)

HSP 1 Score: 58.2 bits (139), Expect = 2.460e-5
Identity = 22/55 (40.00%), Postives = 30/55 (54.55%), Query Frame = 0
Query:  534 DGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVC 588
            D SH  C  C  PG++ CC+ CPRVFH  C+   L+S        ++E W+C  C
Sbjct:   79 DASHDICDACNAPGQVVCCEACPRVFHFNCVEPPLDSNDV----DSEEEWYCNAC 129          
BLAST of Ec-27_004590.4 vs. uniprot
Match: A0A7S0LKH1_9EUKA (Hypothetical protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LKH1_9EUKA)

HSP 1 Score: 58.2 bits (139), Expect = 2.520e-5
Identity = 29/60 (48.33%), Postives = 34/60 (56.67%), Query Frame = 0
Query:  532 GADGSHFF---CSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVC 588
            G DGS      C+VCG  G+LTCCD CPRV+H+ CL    N+  A   Q   E W CP C
Sbjct:   85 GVDGSDLEDDECAVCGQGGKLTCCDVCPRVYHMRCLPASDNA--ALKQQVGAEDWWCPHC 142          
BLAST of Ec-27_004590.4 vs. uniprot
Match: E0W297_PEDHC (Uncharacterized protein n=1 Tax=Pediculus humanus subsp. corporis TaxID=121224 RepID=E0W297_PEDHC)

HSP 1 Score: 58.2 bits (139), Expect = 5.180e-5
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 0
Query:  512 LQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELTCCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTE 590
            +Q+ VK +D         M+  D +  +C+VC   GEL CCD CP+VFH+ C    + + +A  G+T  ETW C +CT+
Sbjct:  832 IQQMVKSSD---------MVKEDSNEDWCAVCMDGGELICCDNCPKVFHVNC---HIPALKAMPGET--ETWQCLLCTD 896          
The following BLAST results are available for this feature:
BLAST of Ec-27_004590.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LBA9_ECTSI0.000e+087.65PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KC71_9PHAE2.190e-30678.17PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JJY6_9PHAE1.260e-2352.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHY8_ECTSI6.900e-2348.31Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FI07_ECTSI5.700e-2247.41GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L4S9_9PHAE1.360e-2144.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X2GIB6_9FUNG2.460e-540.00PHD-type domain-containing protein n=1 Tax=Hesselt... [more]
A0A7S0LKH1_9EUKA2.520e-548.33Hypothetical protein n=2 Tax=Coccolithus braarudii... [more]
E0W297_PEDHC5.180e-537.97Uncharacterized protein n=1 Tax=Pediculus humanus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 539..589
e-value: 1.9E-7
score: 40.7
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 539..590
e-value: 2.1E-7
score: 30.7
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 537..591
score: 9.686
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 530..592
e-value: 1.5E-13
score: 52.2
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 540..588
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 623..648
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 604..622
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..603
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 533..592

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_27contigchr_27:4050297..4052597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-27_004590.4Ec-27_004590.4Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_27 4045528..4055672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-27_004590.4 ID=Ec-27_004590.4|Name=Ec-27_004590.4|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=649bp
MAPQHVRSLGESRRDRPPPPPPFGIAPPPALTAAASTALAVAHRDRAAHA
ACQPARGPLATSTVFGHYPACGHHADGGGIGWVDVRHTSGKGTGASSAAR
DVRRLGESRRNSPPPPSFSIAPPTALTAAASTAIAMAYRHQEELAAHAAR
QEAQDTQAAGTMKICGVGCGHNVEGDHVGWVNIRDVSGRGMGVSTAARYL
RSLDESRQNRRSPLVSIAPPTALTAAASTALAVAYRDQLAAHAARQAARV
PLAASTMNVFGHYPGGGHHGEGDDTSWVDIRDANGKGTGVSSAARRSYPS
CSIVAASMAFAANQPFRAPPVASAAETAHHLVEKGAGGSSVARRSYPSFS
MAAVPVTFAANQSFGAPPAASAAVTAYHLGGGHLSGKGSGSSGAVRFSSA
AGSSTGGEMYATGSGRGGDGEKNSSTINDDGGSCSAKQSLPTSSTDAAGE
SAAAPPVAGSPRTAAGEGTDGKPAHLERAGTQAPKSGTRKPAQKRHPWGG
KDWAGHPLSKKLQKHVKENDKAWRMQGGIMMGADGSHFFCSVCGYPGELT
CCDECPRVFHLGCLRVRLNSQQAAAGQTTDETWHCPVCTEGRGNQSGRRG
EPQLTYHFLRGSIGAFVLLLLSTPPVTFRSSRVCCARVLRSPSKTFRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD