Ec-00_006540.1 (polypeptide) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEc-00_006540.1
Unique NameEc-00_006540.1
Typepolypeptide
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length136
Homology
BLAST of Ec-00_006540.1 vs. uniprot
Match: D7G3E5_ECTSI (Spt4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E5_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 2.290e-100
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
Query:    1 MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSAK 135
            MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSAK
Sbjct:    1 MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSAK 135          
BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A835Z5B7_9STRA (Spt4/RpoE2 zinc finger-domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5B7_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.990e-43
Identity = 66/124 (53.23%), Postives = 87/124 (70.16%), Query Frame = 0
Query:    8 DGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPP 131
            D  D+E+ G D    A++P  LK LRACKRC+LVK   QF   GCENCPFL++E    RV +CT++YFSG+IAM++P+ SWV +WQRI   +PGMYAIEV+GE P    E++ +  I + CKPP
Sbjct:    9 DEEDVEDAGEDM---AQVPGELKALRACKRCALVKTLTQFTEQGCENCPFLRIEESAERVHECTSSYFSGMIAMLNPKESWVARWQRIRAFKPGMYAIEVIGEFPPHDQEYMAENGIRWQCKPP 129          
BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A7S3LYU5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYU5_9STRA)

HSP 1 Score: 141 bits (356), Expect = 5.940e-41
Identity = 56/109 (51.38%), Postives = 84/109 (77.06%), Query Frame = 0
Query:   18 DEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPF 126
            +E+  A+IP   KGLRAC RCSL+K  +QF + GCENC F+ +E ++ R+++CTT+YF G IA+++P+ SWV KWQRI++ +PG+YAIE++GELP +V+E  E   +P+
Sbjct:    5 EEYITADIPDEFKGLRACLRCSLIKTFEQFNDKGCENCEFIDLEGNKGRIEECTTSYFEGAIALVEPQGSWVAKWQRIAQYQPGLYAIEMIGELPDDVIEHCENMGLPY 113          
BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A7S2IAX2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAX2_9STRA)

HSP 1 Score: 139 bits (351), Expect = 8.250e-40
Identity = 67/137 (48.91%), Postives = 85/137 (62.04%), Query Frame = 0
Query:    1 MSYNNYGDGLDLEEEGLDE----FAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDS 133
            M+Y++   G   EEE L E     A A  P+SL+G+RACKRC ++K  DQF N GCENCPFLQME    R   CTT +F G  A+MDP +SWV KW R+    PG+YAI V G+   E+ E LE +   + C+PP S
Sbjct:   16 MNYHDDEAGEGEEEEELPEQVLNLAQARTPSSLRGMRACKRCGILKTFDQFFNEGCENCPFLQMEGGTERCNRCTTAFFEGQAAVMDPRASWVAKWLRVDAYVPGVYAISVTGQFDREIEEELENRGCRWRCRPPTS 152          
BLAST of Ec-00_006540.1 vs. uniprot
Match: K3WRG9_GLOUD (Spt4 domain-containing protein n=33 Tax=Oomycota TaxID=4762 RepID=K3WRG9_GLOUD)

HSP 1 Score: 133 bits (335), Expect = 1.070e-37
Identity = 60/120 (50.00%), Postives = 80/120 (66.67%), Query Frame = 0
Query:   11 DLEEEGLDE-FAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCK 129
            D E++ LD+    A+IP + + LRAC  CSL+K   QF + GCENC FLQM  ++ RV +CT+ YF G+IAMM P+ SWV KWQRI    PG+YA+ V GELP  +  FLE + IP+  +
Sbjct:    8 DEEDDELDDAIVHADIPNTFRELRACMTCSLIKTFTQFYDTGCENCAFLQMADNRQRVAECTSAYFEGMIAMMQPKESWVAKWQRIVRLIPGIYAVSVSGELPESIKRFLEDRNIPYRVQ 127          
BLAST of Ec-00_006540.1 vs. uniprot
Match: B7FXW7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FXW7_PHATC)

HSP 1 Score: 132 bits (331), Expect = 5.060e-37
Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 0
Query:    1 MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDS 133
            MSY+    G +     + E A A +PT+LK +RACKRC ++K  +QF++ GCENCPFL M  D  +V  CTT ++ G  A+MDP  SW  KW R+    PG+YAI V G    ++ E LE + I + C+PP +
Sbjct:    1 MSYDEDERGEEDVPAQVAELANASVPTNLKAVRACKRCGILKTPEQFLDDGCENCPFLHMADDMQQVNKCTTAFYEGQAAVMDPRDSWAAKWIRVDAYLPGVYAITVTGNFDRDIEEDLENRGIRWRCRPPQN 133          
BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A1Z5KK11_FISSO (Transcription elongation factor SPT4 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK11_FISSO)

HSP 1 Score: 130 bits (328), Expect = 1.490e-36
Identity = 61/132 (46.21%), Postives = 80/132 (60.61%), Query Frame = 0
Query:   11 DLEEEGLDE--------FAGAEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSA 134
            D E+E  D+         A A +P +LK +RACKRC L+K   QF + GCENCPFL+M  +  RV  CTT +F G  A+MDP  SW  KW R+    PG+YAI V G+L  +V E LE + I + C+P +SA
Sbjct:    3 DEEDERYDDEVPQQVADLASASVPLNLKTIRACKRCGLLKTQGQFYDEGCENCPFLEMTDNMERVNSCTTAFFEGTAAVMDPGESWAAKWIRVDNYLPGVYAITVTGQLDRDVEEDLENRGIRWRCRPSNSA 134          
BLAST of Ec-00_006540.1 vs. uniprot
Match: W4GN44_9STRA (Spt4 domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=W4GN44_9STRA)

HSP 1 Score: 129 bits (323), Expect = 6.140e-36
Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 0
Query:   23 AEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPF 126
            AEIPT+ + LRAC  CSLVK   QF   GC+NC FL M+ ++ RV DCTT YF G+IAMM P+ SWV KW+RI +  PG+YA+ V GEL   + +FLE++ I +
Sbjct:   17 AEIPTTFRELRACMICSLVKTYSQFYESGCDNCGFLNMQDNRTRVTDCTTAYFEGMIAMMQPKESWVAKWRRIGKFVPGIYAVAVTGELNDSIKKFLEERNISY 120          
BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A814IDH4_9BILA (Transcription elongation factor SPT4 n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A814IDH4_9BILA)

HSP 1 Score: 127 bits (318), Expect = 2.860e-35
Identity = 57/108 (52.78%), Postives = 73/108 (67.59%), Query Frame = 0
Query:   23 AEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCP-FLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPFHCK 129
            A IP SLKGLRAC+ CSL+K  DQF N GC+NC  FL++  ++ R+ DCT+  F G+IAMMDP+ SWV KWQRI     GMYAI V G+LP  ++  L    IP+  +
Sbjct:    3 ASIPASLKGLRACRVCSLIKTLDQFFNEGCDNCERFLRLRGNRDRIIDCTSANFDGMIAMMDPQDSWVAKWQRIDHQVRGMYAISVSGDLPNHIIRILNDNDIPYKTR 110          
BLAST of Ec-00_006540.1 vs. uniprot
Match: A0A067BG27_SAPPC (Spt4 domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BG27_SAPPC)

HSP 1 Score: 126 bits (317), Expect = 4.710e-35
Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 0
Query:   12 LEEEGLDEFAG---AEIPTSLKGLRACKRCSLVKGNDQFVNHGCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRPGMYAIEVVGELPGEVLEFLEQKRIPF 126
            +  +  D+ +G   AEIPT+ + LRAC  CSLVK   QF   GC+NC  L M+ ++ RV DCTT YF G+IAMM P  SWV KW+RI    PG+YA+ V GEL   + ++LE   IP+
Sbjct:    1 MARDDYDDDSGLVHAEIPTTFRELRACMICSLVKTYSQFYESGCDNCAVLNMQDNRQRVTDCTTAYFEGMIAMMQPRESWVAKWRRIGRFVPGIYAVSVTGELNDSIKKYLEDSNIPY 118          
The following BLAST results are available for this feature:
BLAST of Ec-00_006540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3E5_ECTSI2.290e-100100.00Spt4 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A835Z5B7_9STRA3.990e-4353.23Spt4/RpoE2 zinc finger-domain-containing protein n... [more]
A0A7S3LYU5_9STRA5.940e-4151.38Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2IAX2_9STRA8.250e-4048.91Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
K3WRG9_GLOUD1.070e-3750.00Spt4 domain-containing protein n=33 Tax=Oomycota T... [more]
B7FXW7_PHATC5.060e-3743.61Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5KK11_FISSO1.490e-3646.21Transcription elongation factor SPT4 n=2 Tax=Fistu... [more]
W4GN44_9STRA6.140e-3653.85Spt4 domain-containing protein n=4 Tax=Aphanomyces... [more]
A0A814IDH4_9BILA2.860e-3552.78Transcription elongation factor SPT4 n=1 Tax=Brach... [more]
A0A067BG27_SAPPC4.710e-3548.31Spt4 domain-containing protein n=3 Tax=Saprolegnia... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022800Spt4/RpoE2 zinc fingerSMARTSM01389Spt4_2coord: 32..108
e-value: 1.7E-39
score: 147.2
IPR022800Spt4/RpoE2 zinc fingerPFAMPF06093Spt4coord: 32..107
e-value: 1.1E-31
score: 108.7
IPR009287Transcription initiation Spt4PIRSFPIRSF025023Spt4coord: 20..134
e-value: 3.6E-42
score: 140.8
IPR009287Transcription initiation Spt4PANTHERPTHR12882SUPPRESSOR OF TY 4coord: 22..126
IPR038510Spt4 superfamilyGENE3D3.30.40.210coord: 19..123
e-value: 1.7E-40
score: 139.1
IPR029040RNA polymerase subunit RPABC4/transcription elongation factor Spt4SUPERFAMILY63393RNA polymerase subunitscoord: 26..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_00contigchr_00:10426249..10428585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-00_006540.1Ec-00_006540.1Ectocarpus species7 Ec32 male_plus_femaleSDRmRNAchr_00 10426166..10428672 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ec-00_006540.1 ID=Ec-00_006540.1|Name=Ec-00_006540.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=136bp
MSYNNYGDGLDLEEEGLDEFAGAEIPTSLKGLRACKRCSLVKGNDQFVNH
GCENCPFLQMESDQARVQDCTTTYFSGLIAMMDPESSWVGKWQRISECRP
GMYAIEVVGELPGEVLEFLEQKRIPFHCKPPDSAK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022800Spt4/RpoE2_Znf
IPR009287Spt4
IPR038510Spt4_sf
IPR029040RPABC4/Spt4