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Homology
BLAST of Ec-28_001660.2 vs. uniprot
Match: D7FXP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP9_ECTSI) HSP 1 Score: 385 bits (990), Expect = 2.980e-131 Identity = 203/204 (99.51%), Postives = 204/204 (100.00%), Query Frame = 1
Query: 1 MWSAERQIDGLTARNAQLETHLACLEADVQTYHRVHDLLQTDLLCTIRDGETTLGKKDAEICSLTKDREIERLKAQLLHSKEVDGAQDIADRSTEPPSPSLHSRWGSADNVDGASIFRAGNNSADSKTPCGRKAPNASAAIIAAAGTFVYSKASRRATDKLATNVIATSAVSDADSFAAEALIADARLEAWGLTMRRAATSAGS 612
MWSAERQIDGLTARNAQLETHLACLEADVQTYHRVHDLLQTDLLCTIRDGETTLGKKDAEICSLTKDREIERLKAQLLHSKEVDGAQDIADRSTEPPSPSLHSRWGSADNVDGASIFRAGNNSADSKTPCGRKAPNASAAIIAAAGTFVYSKASRRATDKLATNVIATSAVSDADSFAAEALIADARLEAWGLTMRRAATSAG+
Sbjct: 1 MWSAERQIDGLTARNAQLETHLACLEADVQTYHRVHDLLQTDLLCTIRDGETTLGKKDAEICSLTKDREIERLKAQLLHSKEVDGAQDIADRSTEPPSPSLHSRWGSADNVDGASIFRAGNNSADSKTPCGRKAPNASAAIIAAAGTFVYSKASRRATDKLATNVIATSAVSDADSFAAEALIADARLEAWGLTMRRAATSAGN 204
BLAST of Ec-28_001660.2 vs. uniprot
Match: D7FU49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU49_ECTSI) HSP 1 Score: 265 bits (676), Expect = 3.360e-81 Identity = 159/222 (71.62%), Postives = 170/222 (76.58%), Query Frame = 1
Query: 1 MWSAERQIDGLTARNAQLETHLACLEADVQTYHRVHDLLQTDLLCTIRDGETTLGKKDAEICSLTKDR------------EIERLKAQLL----HSKEVDGAQDIADRSTEPPSPSLHSRWGSADNVDGASIFRAGNNSADSKTPCGRKAPNASAAIIAAA--GTFVYSKASRRATDKLATNVIATSAVSDADSFAAEALIADARLEAWGLTMRRAATSAGS 612
MW AERQIDGLTAR AQLET+LA LEAD QT R+HD LQTDL+CTIRD ETTLGKKDAEICSLTKD EIERLK QL ++VDGAQDIADRSTEPPSPSLHSRWGS VDGASIFRA N SA K P GRK P++SAA+IAAA GTFVYSKASRRAT K AT ++ S VSDAD AAEALIADA LEAWGLTMR A TSAG+
Sbjct: 171 MWCAERQIDGLTARKAQLETNLALLEADAQTCDRLHDQLQTDLMCTIRDDETTLGKKDAEICSLTKDNDILRQVNGDKDSEIERLKTQLALRVKDPEKVDGAQDIADRSTEPPSPSLHSRWGS---VDGASIFRASNTSAAFKAPVGRKTPDSSAAVIAAAAAGTFVYSKASRRATVKSATKIVVASTVSDADRAAAEALIADAGLEAWGLTMR-ATTSAGN 388
BLAST of Ec-28_001660.2 vs. uniprot
Match: D7FXP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXP8_ECTSI) HSP 1 Score: 125 bits (315), Expect = 2.560e-27 Identity = 62/64 (96.88%), Postives = 63/64 (98.44%), Query Frame = -2
Query: 1120 LAPEHQKSVKDLKTRVITPSKDAGTPQKGLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF 1311
+A EHQKSVKDLKTRVITPSKDAGTPQKGLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF
Sbjct: 773 MAKEHQKSVKDLKTRVITPSKDAGTPQKGLLKVGGGGSGVKLMKPAAGRKDTPYAGKKKASDYF 836
BLAST of Ec-28_001660.2 vs. uniprot
Match: D7G509_ECTSI (Uncharacterized protein n=5 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G509_ECTSI) HSP 1 Score: 108 bits (270), Expect = 1.540e-22 Identity = 92/218 (42.20%), Postives = 115/218 (52.75%), Query Frame = 1
Query: 1 MWSAERQIDGLTARNAQLETHLACLEADVQTYHRVHDLLQTDLLCTIRDGETTLGKKDAEICSLT------------KDREIERLKAQLLHSKEVDGAQDIADRSTEPPSPSLHSRWGSADNVDGASIFRAGNNSADSKTPCGRKAPNASAAIIA--AAGTFVYSKASRRATDKLATNVIATSAVSDADSFAAEALIADARLEAWGLTMRRAATSAGS 612
MW AER +D LT NA LE LACLEADVQT H ++D ++D LC++RDGET L KDAEI SL KD EI+ LKAQL + ++ Q+ E P S G S F+A + + S ++SAA+IA A+GTFV SKASR T +AT + D AAE LIAD L W L+ ATSAG+
Sbjct: 170 MWCAERTVDSLTGANALLENKLACLEADVQTGHDLYDQFRSDFLCSLRDGETALSHKDAEISSLKQDNAQLVKANQDKDEEIKLLKAQL--AMQLKQPQEACTAGGEAPRTSA-----------GVSSFQAKGHPSVST--------DSSAAVIATAASGTFV-SKASRSGTKSVATTTYLDTTADD--KAAAEFLIADTALAHWWLSAT--ATSAGN 361
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Length | 1331 |
Hectar predicted targeting category | other localisation |
Gene id | Ec-28_001660.2 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Ec-28_001660.2 ID=Ec-28_001660.2|Name=Ec-28_001660.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=306bp MWSAERQIDGLTARNAQLETHLACLEADVQTYHRVHDLLQTDLLCTIRDG ETTLGKKDAEICSLTKDREIERLKAQLLHSKEVDGAQDIADRSTEPPSPS LHSRWGSADNVDGASIFRAGNNSADSKTPCGRKAPNASAAIIAAAGTFVY SKASRRATDKLATNVIATSAVSDADSFAAEALIADARLEAWGLTMRRAAT SAGSINKSPSDTFTYYYQRRREGGHHVRGTALIFNPEENRSTPFKLVPWH DKVGEVINKYGLQDRTTTKIHQKAEPTAQPGPPTCERDSKVRTSEKKDNK KQRTP* back to topspliced messenger RNA >Ec-28_001660.2 ID=Ec-28_001660.2|Name=Ec-28_001660.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1331bp|location=Sequence derived from alignment at chr_28:1449879..1453529- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.
ATGTGGTCCGCCGAGCGACAGATCGACGGGCTGACGGCGAGGAATGCCCA GCTCGAGACACACCTTGCTTGCTTGGAGGCGGACGTCCAGACGTACCACC GAGTGCACGACCTGCTGCAAACTGATCTCCTGTGCACGATCCGCGACGGC GAGACGACTCTGGGCAAGAAGGATGCGGAGATATGCTCTCTGACCAAGGA CCGAGAGATCGAACGCCTCAAGGCTCAGCTCCTCCACTCCAAGGAAGTTG ACGGCGCGCAGGACATCGCCGACCGCTCGACCGAGCCGCCCAGCCCTAGC TTGCACAGCAGGTGGGGAAGCGCGGATAACGTGGACGGGGCCTCGATTTT TCGGGCCGGCAACAACTCCGCAGACTCCAAGACCCCCTGCGGCAGGAAAG CGCCCAACGCATCCGCCGCCATCATCGCCGCTGCCGGGACCTTCGTCTAC TCAAAGGCCTCCCGCCGCGCGACCGACAAGTTGGCCACCAACGTCATCGC CACTAGCGCTGTTTCCGACGCTGACAGTTTCGCTGCGGAGGCATTGATCG CCGACGCCAGGCTTGAAGCCTGGGGGCTCACCATGAGGAGAGCTGCCACC TCCGCTGGGTCCATCAACAAGTCACCAAGCGACACGTTCACCTACTACTA CCAACGGAGAAGAGAAGGGGGCCATCACGTTCGAGGAACTGCGCTGATAT TCAATCCCGAGGAAAATCGGTCCACGCCATTTAAGCTGGTTCCTTGGCAT GATAAAGTAGGCGAAGTGATCAATAAATACGGTTTGCAGGATCGAACAAC GACTAAAATACACCAAAAGGCAGAGCCAACAGCACAGCCAGGCCCGCCCA CGTGTGAGAGAGATTCAAAAGTCAGAACATCGGAAAAGAAGGATAACAAA AAACAACGAACACCGTAGCACACTTTTCACCGAGAGGGCGGATCTGCATC ATCACTGCTGGAAACTTCACACCAGCTGTCCAACGTATCTCTACACCCCA ATACCCCGGTTTGCGCCCCCTCCTCTACTCCGTCCCTGCTTTGCTTTGCA GGGATGCGAGGTCAATGGCCTACGACCACGGCATGCACGGCAATGACTAC ACCCCGCCCTTTCACACTAGAAATAATCGGAGGCCTTCTTCTTGCCGGCG TACGGGGTATCCTTTCGCCCTGCCGCAGGTTTCATGAGCTTGACCCCGGA CCCCCCCCCGCCGACCTTCAAGAGCCCCTTTTGGGGAGTTCCAGCGTCCT TCGAGGGTGTGATAACCCGCGTCTTCAAGTCCTTTACCGACTTTTGGTGT TCTGGGGCCAGCAAAAAAGAGGCGGGGGGGG back to topprotein sequence of Ec-28_001660.2 >Ec-28_001660.2 ID=Ec-28_001660.2|Name=Ec-28_001660.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=306bp
MWSAERQIDGLTARNAQLETHLACLEADVQTYHRVHDLLQTDLLCTIRDG ETTLGKKDAEICSLTKDREIERLKAQLLHSKEVDGAQDIADRSTEPPSPS LHSRWGSADNVDGASIFRAGNNSADSKTPCGRKAPNASAAIIAAAGTFVY SKASRRATDKLATNVIATSAVSDADSFAAEALIADARLEAWGLTMRRAAT SAGSINKSPSDTFTYYYQRRREGGHHVRGTALIFNPEENRSTPFKLVPWH DKVGEVINKYGLQDRTTTKIHQKAEPTAQPGPPTCERDSKVRTSEKKDNK KQRTP* back to topmRNA from alignment at chr_28:1449879..1453529- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >Ec-28_001660.2 ID=Ec-28_001660.2|Name=Ec-28_001660.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3651bp|location=Sequence derived from alignment at chr_28:1449879..1453529- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGTGGTCCGCCGAGCGACAGATCGACGGGCTGACGGCGAGGAATGCCCA
GCTCGAGACACACCTTGCTTGCTTGGAGGCGGACGTGAGTCAAAGCAATG
GTAGGGGGGGGGGGGTAACCCAGTACCTTTGACGTCTAGAGTTCTAGACG
TTTGCCATATGAGGGGTGCCCCGACGAGGCTACCATTTTTGATGCCATCC
TTCCGGAGTCGAAACGCAACAAGAAAGAGTTTTCATTGCCAAAACGCACT
GCTGTATCTACCCCACTAACACGACGCTGTTTCCGCTGCACCGCTGTCTC
GACGCTCGGCGACCTCAGGTCCAGACGTACCACCGAGTGCACGACCTGCT
GCAAACTGATCTCCTGTGCACGATCCGCGACGGCGAGACGACTCTGGGCA
AGAAGGATGCGGAGATATGCTCTCTGACCAAGGTGAATCATGCAATGAGT
TGCGACGGGATGCCAACAGAAGGGAACTTGCTGCTGATGTCATCGTGTGC
GAACGAGAATGCCCAGCAGGTTTCGCTGGTTGACTCTGTTGCAATGCTAC
CACCGCGACTTTCACGATGAGGCCGATGAGGTAGAAACCGTTCGACGCTA
GCTAGCTGTCTGTGTGCGATGGCATGTAGTGACACCACCACCTCCGTTTC
GGTTGTGTTGCTGCTCCGTAACGCCAACGACGCGAAGGACCGAGAGATCG
AACGCCTCAAGGCTCAGCTCCTCCACTCCAAGGAAGGTCAGTGCACGTGT
CAACGTATTGCCGAGGTGTAGTTCGTTAGTTGGGGGGACTCACTTGCTTT
GGGGAAGGGTTCCGACGAACGATCGATGTACGTACGTGTAGTTGGACATC
GCAACCCGAGCCGAAACGAAGACATGCGACGTGTTTTGTGCTTGTGGAGG
TGTGCTTATTGACTATTAGGTTGGTCAACGCCTTCATCGGACGGGCATGG
TCATGTGGAAGTTGTTGCAGCTCGTCCTCTACCAGCTCGTGTAGTGTATG
CTTCCTGGTCCTACGTTGACAATAGTTTCAGGAACCTGTGTCGAAACCTC
AACGAATCTGTTCATGTACCGTCAACGTTTCCGTGGAGAGTAGTACACTT
AGCCAATGTGCATGTTGTAAGACGGGTGTTCGGATGGATACGTCCCATGC
CAGCCTCTGTGTCTCACAACGCGCAGTCGTGCCGACAACAACGTTCTCTT
GTTTGCCCTCCATTTCCTATTTTTTTTGCAGTTGACGGCGCGCAGGACAT
CGCCGACCGCTCGACCGAGCCGCCCAGCCCTAGGTACGATACCAAATTGC
ATGACCGCTGCTCTGTAGACTTGCCAGCAAACGGTTTCGGCCGTTTTGAA
GTCCCCGTTGTCGGTATGAAGATTGATTGTGGATGTTTGACCGCTGTGGC
TACATTGTTTTCAGGATGCGTGTACAAGGGGTTTTGCTTTGAGCTCTTTT
TGCTCCAGAAGGTATCACTGATGACTGCATACAAGGTAGGTGCGTTCTGC
GATGCTTCGTTGACGGGTTGATGATTCGCTTGCTGCGATAGCTTACTTCG
CAAGACCATCCATTCGCAGTAGGATGGATTCTACGTTTGAGCATACTAGG
GGGGAAGACGGGGGCGAGGTACCGTATCATCTTCTTCCATCCCATAGTAT
CATCCGAAGAATGGAGCAGCAAGAGACCATCGGCCTACTTGTTTGTCCAC
CTGCTCCATGCTCACCCCCCCCCCCCGCCGCCGCGCCCGCCAACTCAAAC
AGCTTGCACAGCAGGTGGGGAAGCGCGGATAACGTGGACGGGGCCTCGAT
TTTTCGGGCCGGCAACAACTCCGCAGACTCCAAGACCCCCTGCGGCAGGA
AAGCGCCCAACGCATCCGCCGCCATCATCGCCGCTGCCGGGACCTTCGTC
TACTCAAAGGCCTCCCGCCGCGCGACCGACAAGTTGGCCACCAACGTCAT
CGCCACTAGCGCTGTTTCCGACGCTGACAGTTTCGCTGCGGAGGCATTGA
TCGCCGACGCCAGGCTTGAAGCCTGGGGGCTCACCATGAGGAGAGCTGCC
ACCTCCGCTGGGTGAGGGTGTGACACGTTGTTTTCCTGTCCCATGCTCTA
CCAGAAGAAGAGTGACTGACTCTCTTGTTGGTGTTGTACCTGTTGTGCGT
GTTGTTGGTGTTGTGCGTACTATGGAGTGTGGTGCTTGCAATAACATTGA
AAATGAGCTCGAGCTCTGGCTTTGCATTCTCCTTTCGATATGCTCGAAAG
TTGCACACGGAATAGGGGAAGAAGCAAAGCGTTTCTGGGTTTGAAAAGCT
AGCCAAACACGCGTCCGCTCATATTAGACGTGGGTCATTTTTCGTATGGT
AAGTAAATCACCCGAAATTGATGCTCCACCCGAACGGCATGTGACTCCAA
CGGAGCTCTCAGGCCACTGTCATTTTTCTGTGAAGCTCCGCGGGTAGCAG
AAGCTGTGCATCTTGCGTATCGTGTGTCCTCTTGCCCCATTCCCTCCCGC
CCGACACTGCAGAAACTGAATACCAGCAGTTCGACCACATCTTCAGGGCC
TTCCAACACCACTCACCCACGACATCTGCTACTAATACCATCTACGACCA
TATGGGGGGTCTTCACCAGCCTCTTCCCGACACGTCATCACCAAACGTTG
TCCACATACCCCCACCCCCGAGTTACATCTGCCATTTACGACATGGGGCG
CCTTCACCAGCCTCTTCCCGACACGTCATCACCAGACGTTGTCCACACCC
ACCCACCCCGGAGTTTCTCAACTCCCCCAACATTTCAAAAAAATAAAAAA
AAAGAATAAAAAACCCCGTGAAGGTTCGCTCGTTGCTCCGTGTATTGTGT
GTCATGTTCCTGCTGTTGTGTGCCAAACCGTTTTGCCTACAGCCCGCGCT
GTGTTCGGAACGTCATTTTGCTCAACAGGTCCATCAACAAGTCACCAAGC
GACACGTTCACCTACTACTACCAACGGAGAAGAGAAGGGGGCCATCACGT
TCGAGGAACTGCGCTGATATTCAATCCCGAGGAAAATCGGTCCACGCCAT
TTAAGCTGGTTCCTTGGCATGATAAAGTAGGCGAAGTGATCAATAAATAC
GGTTTGCAGGATCGAACAACGACTAAAATACACCAAAAGGCAGAGCCAAC
AGCACAGCCAGGCCCGCCCACGTGTGAGAGAGATTCAAAAGTCAGAACAT
CGGAAAAGAAGGATAACAAAAAACAACGAACACCGTAGCACACTTTTCAC
CGAGAGGGCGGATCTGCATCATCACTGCTGGAAACTTCACACCAGCTGTC
CAACGTATCTCTACACCCCAATACCCCGGTTTGCGCCCCCTCCTCTACTC
CGTCCCTGCTTTGCTTTGCAGGGATGCGAGGTCAATGGCCTACGACCACG
GCATGCACGGCAATGACTACACCCCGCCCTTTCACACTAGAAATAATCGG
AGGCCTTCTTCTTGCCGGCGTACGGGGTATCCTTTCGCCCTGCCGCAGGT
TTCATGAGCTTGACCCCGGACCCCCCCCCGCCGACCTTCAAGAGCCCCTT
TTGGGGAGTTCCAGCGTCCTTCGAGGGTGTGATAACCCGCGTCTTCAAGT
CCTTTACCGACTTTTGGTGTTCTGGGGCCAGCAAAAAAGAGGCGGGGGGG
G back to topCoding sequence (CDS) from alignment at chr_28:1449879..1453529- >Ec-28_001660.2 ID=Ec-28_001660.2|Name=Ec-28_001660.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=918bp|location=Sequence derived from alignment at chr_28:1449879..1453529- (Ectocarpus species7 Ec32 male_plus_femaleSDR) ATGTGGTCCGCCGAGCGACAGATCGACGGGCTGACGGCGAGGAATGCCCA GCTCGAGACACACCTTGCTTGCTTGGAGGCGGACGTCCAGACGTACCACC GAGTGCACGACCTGCTGCAAACTGATCTCCTGTGCACGATCCGCGACGGC GAGACGACTCTGGGCAAGAAGGATGCGGAGATATGCTCTCTGACCAAGGA CCGAGAGATCGAACGCCTCAAGGCTCAGCTCCTCCACTCCAAGGAAGTTG ACGGCGCGCAGGACATCGCCGACCGCTCGACCGAGCCGCCCAGCCCTAGC TTGCACAGCAGGTGGGGAAGCGCGGATAACGTGGACGGGGCCTCGATTTT TCGGGCCGGCAACAACTCCGCAGACTCCAAGACCCCCTGCGGCAGGAAAG CGCCCAACGCATCCGCCGCCATCATCGCCGCTGCCGGGACCTTCGTCTAC TCAAAGGCCTCCCGCCGCGCGACCGACAAGTTGGCCACCAACGTCATCGC CACTAGCGCTGTTTCCGACGCTGACAGTTTCGCTGCGGAGGCATTGATCG CCGACGCCAGGCTTGAAGCCTGGGGGCTCACCATGAGGAGAGCTGCCACC TCCGCTGGGTCCATCAACAAGTCACCAAGCGACACGTTCACCTACTACTA CCAACGGAGAAGAGAAGGGGGCCATCACGTTCGAGGAACTGCGCTGATAT TCAATCCCGAGGAAAATCGGTCCACGCCATTTAAGCTGGTTCCTTGGCAT GATAAAGTAGGCGAAGTGATCAATAAATACGGTTTGCAGGATCGAACAAC GACTAAAATACACCAAAAGGCAGAGCCAACAGCACAGCCAGGCCCGCCCA CGTGTGAGAGAGATTCAAAAGTCAGAACATCGGAAAAGAAGGATAACAAA AAACAACGAACACCGTAG back to top
Synonyms
The feature 'Ec-28_001660.2' has the following synonyms
Synonym |
Esi0033_0005 |
Esi_0033_0005 |
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