Ec-28_001050.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_001050.1
Unique NameEc-28_001050.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length295
Homology
[Close]
BLAST of Ec-28_001050.1 vs. uniprot
Match: A0A6H5KNT2_9PHAE (Hydrolase_4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT2_9PHAE)

HSP 1 Score: 474 bits (1221), Expect = 4.760e-161
Identity = 301/432 (69.68%), Postives = 309/432 (71.53%), Query Frame = 1 
Query:  241 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXX------GGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGPFAGAV-----------------------------------------GAR---------QGDIRGRPRAVEETPLVGAGQGPQRHLRGETSSEGVFREV*PFVRSLDRDDPISTAEALPAPAAAAAERIASPRKNXXXXXXXXXXXIANDGAPVLAASSVLAASGAPASGSGGSASVNGGR 1368
            MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCY+LKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGS+CGEPVL AVANP  KGK NSKA  XXXXXXXXXXX      GGFAKVGKIGGGGRGSTIPVALYRTANARYTL+YSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKG FAG V                                         GAR         +G     P  +   P     +G      G       F  +  FVRSLDRDDPI+TAEALPA AAAAAE        XXXXXXXXXXX           SSVL ASGAP      SASVNGGR
Sbjct:    1 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYSLKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSRCGEPVLAAVANPKPKGKRNSKAAGXXXXXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLIYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGSFAGVVLHSPILSGMRVLTESRALSCLDIYPNVDRASRITCPVMVMHGARDEEVPWEHGKGIFEAVPEPLRRRPWWVPDRGHNDICEGRRHLREYFARLSAFVRSLDRDDPIATAEALPATAAAAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSVLVASGAPXXXXXXSASVNGGR 432
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BLAST of Ec-28_001050.1 vs. uniprot
Match: D7G4Z1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z1_ECTSI)

HSP 1 Score: 457 bits (1177), Expect = 2.910e-157
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1 
Query:  385 MVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGPFAGAVGARQGDIRGRPRAVEETPLVGAGQGPQRHLRGETSSEGVFREV 1122
            MVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGPFAGAVGARQGDIRGRPRAVEETPLVGAGQGPQRHLRGETSSEGVFREV
Sbjct:    1 MVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGPFAGAVGARQGDIRGRPRAVEETPLVGAGQGPQRHLRGETSSEGVFREV 246
[Close]
BLAST of Ec-28_001050.1 vs. uniprot
Match: A0A6S9I0E5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9I0E5_HETAK)

HSP 1 Score: 164 bits (415), Expect = 1.100e-42
Identity = 100/241 (41.49%), Postives = 117/241 (48.55%), Query Frame = 1 
Query:  241 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSP-TEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLAS 960
            MGGVP  LLC WCRGGCSTA VA AL FFPP    Y L +   ++E++ +V+  LE                       E   T + N   K                                     I   LYR   A  T+VYSHGNATD+GAMHDR  G+A  + VNVLAYDYTGYG++SG   TE  TY DIEA C W  +N+          N    LILYGQSVGSGP+CY AS
Sbjct:    1 MGGVPGQLLCFWCRGGCSTARVAGALAFFPPEEQTYHLHKDPHTKEIQFIVNPDLEPLPY-------------------ENTQTIILNTRRK-----------------------------------KVITAVLYRAEGASKTIVYSHGNATDLGAMHDRYVGLATILKVNVLAYDYTGYGQSSGDMCTEPDTYADIEAACQWVIENISS--------NPAEDLILYGQSVGSGPSCYYAS 179
[Close]
BLAST of Ec-28_001050.1 vs. uniprot
Match: A0A7S2XWM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM1_9STRA)

HSP 1 Score: 145 bits (365), Expect = 3.450e-37
Identity = 90/231 (38.96%), Postives = 110/231 (47.62%), Query Frame = 1 
Query:  241 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVG 933
            MGGVP  LLC WC+GGCSTA VA ALTFFPP P     K     E L   V E L+     + VE   + +                                                      R   IPV LYR  NA+YTL++SHGNATD+GAMHDR  G+A ++ +N++ YDYTGYG +  + TE  TY D+EAV  W  KNV  + E          +ILYGQSVG
Sbjct:    1 MGGVPGTLLCFWCKGGCSTAKVAGALTFFPPEPHYTLQKDPNNPERLIFRVHEDLQPLPF-DNVEAQIVTTR-----------------------------------------------------RRKNIPVVLYRYRNAKYTLIFSHGNATDLGAMHDRFVGLAMSLQINIVGYDYTGYGHSHDTCTEGDTYADLEAVFDWVVKNVAPQPETS--------VILYGQSVG 169
[Close]
BLAST of Ec-28_001050.1 vs. uniprot
Match: A0A024U6Q3_9STRA (Hydrolase_4 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U6Q3_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.290e-29
Identity = 83/242 (34.30%), Postives = 114/242 (47.11%), Query Frame = 1 
Query:  241 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDK 966
            MGGV   L  LW R G S+ATVA+ALTFFPPSP    +K+ +G+  ++  +D  +  ++T                      L  V                                       RG  IP  ++R   A +T++YSHGNATD G M  R   ++  + VNV+ YDYTGYG ASGSP+EA TY DI A+      ++    +          +ILYGQSVGSGP+ YLA+++
Sbjct:    1 MGGVAGSLFMLWVRSGFSSATVASALTFFPPSPTYGLVKQADGATAVDHYIDANVPFSSTAS--------------------LAVVRTK------------------------------------RGQEIPCFVFRHPEATFTMIYSHGNATDCGGMFLRYLSLSRELKVNVVGYDYTGYGGASGSPSEADTYADITAIYDHVVAHICTSSDPAKE------IILYGQSVGSGPSIYLATER 180
[Close]
BLAST of Ec-28_001050.1 vs. uniprot
Match: A0A6G0XWZ8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWZ8_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.070e-29
Identity = 85/242 (35.12%), Postives = 118/242 (48.76%), Query Frame = 1 
Query:  241 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDK 966
            MGGV   L  LW R G S+ATVAAALTFFPP P  Y ++R E                               S + C    +  + N N + KS +K                           +G+ IP  ++    A++TL+ SHGNATD GAM+ R   ++  + VN++ YDY+GYG ASG+P+EA TY DI AV  + ++N+  +            +ILYGQSVGSGP+ +LAS +
Sbjct:    1 MGGVVGSLFMLWVRSGFSSATVAAALTFFPPEP-TYIIERDE-------------------------------SDTNC---KIHHLINENERHKSAAKVIMVRTK--------------------QGNEIPCFVFTYPEAKFTLILSHGNATDCGAMYLRYLSLSRELKVNLVGYDYSGYGGASGTPSEANTYADITAVYNYVKENMSSD--------PAQDIILYGQSVGSGPSIFLASQQ 179
[Close]
BLAST of Ec-28_001050.1 vs. uniprot
Match: A0A1V9ZDL9_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDL9_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.830e-28
Identity = 88/244 (36.07%), Postives = 120/244 (49.18%), Query Frame = 1 
Query:  241 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSK 972
            MGGV   L  LW R G S+ATVAAALTF+PP P  Y L++   + +    +  V    A           S ++G+     V     +P N+                                     IP  ++R   A +TL++SHGNATD GAM+ R   ++  + VNV+AYDY+GYG A+G PTEA TY DI A+  +  K +      G  ++K   +ILYGQSVGSGP+ YLAS + K
Sbjct:    1 MGGVAGTLFVLWVRSGFSSATVAAALTFYPPLP-TYTLEKDASTAKNANPMYNVTHFIAEH---------SRLAGAA---RVYMVPTSPGNE-------------------------------------IPCFVFRYPEAEFTLIFSHGNATDCGAMYSRYLALSRELSVNVVAYDYSGYGAATGRPTEANTYTDITAILDFCIKQL------GYAEHK---IILYGQSVGSGPSIYLASKEHK 185
[Close]
BLAST of Ec-28_001050.1 vs. uniprot
Match: A0A485K8Z6_9STRA (Aste57867_2766 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8Z6_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.250e-28
Identity = 82/242 (33.88%), Postives = 116/242 (47.93%), Query Frame = 1 
Query:  241 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDK 966
            MGGV   L  LW R G S+ATVA+AL FFPP P     K  +GS    ++V    +     E     TIV                         ++KA                           G+ IP  ++R   A++TL++SHGNATD G M+ R   ++  + VNVL YDY+GY  A+G+P+EA TY DI A+  +A  ++ ++            ++LYGQSVGSGP+ YLA++K
Sbjct:    1 MGGVAGTLFALWVRSGFSSATVASALIFFPPQPSYNLTKDADGS----IMVTHFDDDNREYESAATVTIV-------------------------HTKA---------------------------GNDIPCFVFRHPQAKFTLIFSHGNATDCGGMYLRYLSLSRELKVNVLGYDYSGYTCATGNPSEANTYADITAIYEFAAAHICRDASKE--------VVLYGQSVGSGPSIYLAAEK 178
[Close]
BLAST of Ec-28_001050.1 vs. uniprot
Match: A0A1W0AB71_9STRA (Hydrolase_4 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AB71_9STRA)

HSP 1 Score: 124 bits (312), Expect = 2.510e-28
Identity = 85/244 (34.84%), Postives = 117/244 (47.95%), Query Frame = 1 
Query:  241 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSK 972
            MGGV   L  LW R G S ATVAAALTF+PP P  Y L++   + + +     V    A           + ++G+     V T V N                                         +P  ++R   A +T+V+SHGNATD GAM  R   ++  + VNV+AYDY+GYG A+G PTEA TY DIEA+  +A K++    +          +ILYGQSVGSGP+ YLA+ + +
Sbjct:    1 MGGVAGTLFVLWVRSGFSAATVAAALTFYPPLP-TYTLEKDPNTAKHDYPQYNVKHFIAEN---------TKLAGAARVYMVPTRVGNE----------------------------------------VPCFVFRYPEAEFTIVFSHGNATDCGAMFSRYVSLSRELSVNVVAYDYSGYGGATGRPTEANTYCDIEAIFEFATKHLGYAADS---------IILYGQSVGSGPSVYLAAKEHR 185
[Close]
BLAST of Ec-28_001050.1 vs. uniprot
Match: A0A7S2RPX7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RPX7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.930e-28
Identity = 88/253 (34.78%), Postives = 122/253 (48.22%), Query Frame = 1 
Query:  241 MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYAL-KRKEGSEELEMVVDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAXXXXXXXXXXXXXGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGNATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVCAW-ARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGPFAGAV 993
            MGGV S L  + C+  C  ++VA++LTF PP PP Y L + ++ S E++ ++D ++  +A    VEI+ + +                                                      +GS IP  L+R  +A  TL++SHGNA D GAM +R   +     VNV AYDYTGYG ASG P+EA TY DIEA       +N+    E          ++LYGQSVGSGP+C LAS KS+ P  G +
Sbjct:    1 MGGVVSQLCVMLCQHKCRPSSVASSLTFIPPDPPYYELVEAQDESGEIQWLLDPLVAGSAFPH-VEISILKTE-----------------------------------------------------KGSFIPAFLFRHPDATLTLIFSHGNAADCGAMRERYIQLCRRGRVNVFAYDYTGYGAASGKPSEAHTYTDIEAAYDHLVSRNICSHPEQQ--------IVLYGQSVGSGPSCKLASSKSR-PIRGMI 190
The following BLAST results are available for this feature:
BLAST of Ec-28_001050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KNT2_9PHAE4.760e-16169.68Hydrolase_4 domain-containing protein n=1 Tax=Ecto... [more]
D7G4Z1_ECTSI2.910e-157100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6S9I0E5_HETAK1.100e-4241.49Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XWM1_9STRA3.450e-3738.96Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A024U6Q3_9STRA2.290e-2934.30Hydrolase_4 domain-containing protein n=2 Tax=Apha... [more]
A0A6G0XWZ8_9STRA3.070e-2935.12Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9ZDL9_9STRA1.830e-2836.07Hydrolase_4 domain-containing protein n=1 Tax=Achl... [more]
A0A485K8Z6_9STRA2.250e-2833.88Aste57867_2766 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1W0AB71_9STRA2.510e-2834.84Hydrolase_4 domain-containing protein n=1 Tax=Thra... [more]
A0A7S2RPX7_9STRA2.930e-2834.78Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:1017350..1031723 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.0
Seed ortholog evalue3.4e-126
Seed eggNOG ortholog2880.D7G4Z1
Length1671
KEGG koko:K10908,ko:K17890
KEGG Pathwayko04136,ko04138,ko04140,ko04621,map04136,map04138,map04140,map04621
Hectar predicted targeting categorysignal peptide
Gene idEc-28_001050.1
EggNOG free text desc.palmitoyl-(protein) hydrolase activity
EggNOG OGsCOG1073@1,KOG1552@2759
EC2.7.7.6
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03029,ko04131
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_001050Ec-28_001050Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 1017350..1031723 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_001050.1Ec-28_001050.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 1017591..1031178 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_001050.1.1Ec-28_001050.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1017350..1017701 +
Ec-28_001050.1.2Ec-28_001050.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1025089..1025145 +
Ec-28_001050.1.3Ec-28_001050.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1027036..1027418 +
Ec-28_001050.1.4Ec-28_001050.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1028036..1028141 +
Ec-28_001050.1.5Ec-28_001050.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1028642..1028729 +
Ec-28_001050.1.6Ec-28_001050.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1029987..1030105 +
Ec-28_001050.1.7Ec-28_001050.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 1031158..1031723 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0010505UTR:Ec-28_001050.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 1017350..1017590 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_001050.1CDS:Ec-28_001050.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 1017591..1017701 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0010503UTR:Ec-28_001050.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 1031179..1031723 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_001050.1 ID=Ec-28_001050.1|Name=Ec-28_001050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=295bp
MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMV
VDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAA
GGKGGGGGGSSSGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGN
ATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVC
AWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGPFAGA
VGARQGDIRGRPRAVEETPLVGAGQGPQRHLRGETSSEGVFREV*
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spliced messenger RNA

>Ec-28_001050.1 ID=Ec-28_001050.1|Name=Ec-28_001050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1671bp|location=Sequence derived from alignment at chr_28:1017350..1031723+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TGCCACATCTCTGATCTGTTCCCGTTGCCTTGTCCCGGTCGTACAAGGAG
CAATCAGGTCAGGGCTAGGGTGAGGGTTTCATGGAGACAGAAGGAAGCCG
TTAGATTTGCCGTGCTTGCGGTCTCGTGGGATAGGGTGCTACAACAAGCT
GCCGATCCAGGGAGCCAACCCGATCACCAGCGGGCAATTCGGGAAGAGGT
CGTGCGCCGAGAGTGTTGCGGAGGTTTTTTGTTGGCGAGCCATGGGAGGG
GTACCCAGCGTGCTGCTTTGCCTTTGGTGTCGAGGGGGGTGCTCGACGGC
GACGGTGGCTGCGGCGCTGACGTTCTTCCCTCCAAGCCCTCCATGCTACG
CGCTGAAAAGAAAGGAGGGGAGCGAGGAGCTGGAGATGGTCGTTGACGAA
GTCTTGGAGGCAACGGCGACAACCGAGGGCGTAGAAATCGCGACAATCGT
CTCCGGAGTCAGCGGGAGCCAATGCGGAGAACCGGTCTTGACGGCGGTCG
CCAATCCAAACAACAAGGGCAAAAGCAACAGCAAGGCAGCCGGGGGGAAA
GGGGGCGGCGGTGGCGGCAGCAGCAGCGGTGGCTTCGCCAAGGTCGGGAA
GATCGGGGGAGGCGGGCGGGGGTCCACCATCCCAGTGGCATTGTACCGCA
CGGCGAACGCCAGGTACACGCTTGTCTACAGCCACGGGAACGCGACCGAC
ATCGGGGCGATGCACGACCGGTGCGCGGGGATCGCGGAGGCCGTCGGGGT
GAACGTTCTGGCGTACGACTACACGGGGTACGGGCGCGCAAGCGGCTCTC
CCACGGAAGCCCGGACGTACAGAGATATAGAGGCGGTGTGTGCGTGGGCG
CGAAAAAATGTGCTGCAGGAGGGAGAAGACGGCAGCGGGAAAAATAAGGG
GCATGGTTTGATCCTGTACGGCCAGAGCGTCGGAAGCGGTCCCACCTGCT
ACCTGGCCTCGGACAAGTCCAAGGGACCCTTTGCAGGTGCCGTGGGAGCA
CGGCAAGGGGATATTCGAGGCCGTCCCCGAGCCGTTGAGGAGACGCCCCT
GGTGGGTGCCGGACAGGGGCCACAACGACATCTGCGAGGGGAGACGTCAT
CTGAGGGAGTATTTCGGGAGGTTTAGCCCTTTCGTCAGATCGCTCGACCG
AGATGACCCCATTTCAACCGCAGAAGCGTTACCCGCTCCCGCCGCTGCCG
CTGCCGAACGGATAGCGAGCCCCAGAAAGAACCCCCCGGCCGCCCCCGGG
GGGGGGGGTGCCGCGATCGCCAACGACGGGGCCCCCGTCCTCGCGGCCTC
CTCCGTGTTGGCGGCGTCTGGTGCGCCGGCCAGCGGCAGCGGTGGCAGCG
CATCGGTGAACGGGGGGCGATAGTGACGAAGCAAAGGGATTAGAGGTGTG
GGGGCGTCGTCGGGTGTTGAGGGACTGGCTGCCGTTTCTCGAACGGCCGG
TTTTATTGGATAGCTCAACTTTTAGCTTTTCGAATGAGAAAAGCCAACAT
ATTTTCGAGAGAAGCCAGTATTTTTTGTTTGTACTCTTGTTTTGTAGGAA
TTGGCTGTTAGTTTTTTCTTGTTTTTTTTTTTTTTAGTAATCATGAAGTT
TGTGCAACGCTTGTTTGTCGTCGTTGAGAGTGGGCAGGCTGTGCCATCAA
AACCCGTGGGGAAAGGGTTTG
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protein sequence of Ec-28_001050.1

>Ec-28_001050.1 ID=Ec-28_001050.1|Name=Ec-28_001050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=295bp
MGGVPSVLLCLWCRGGCSTATVAAALTFFPPSPPCYALKRKEGSEELEMV
VDEVLEATATTEGVEIATIVSGVSGSQCGEPVLTAVANPNNKGKSNSKAA
GGKGGGGGGSSSGGFAKVGKIGGGGRGSTIPVALYRTANARYTLVYSHGN
ATDIGAMHDRCAGIAEAVGVNVLAYDYTGYGRASGSPTEARTYRDIEAVC
AWARKNVLQEGEDGSGKNKGHGLILYGQSVGSGPTCYLASDKSKGPFAGA
VGARQGDIRGRPRAVEETPLVGAGQGPQRHLRGETSSEGVFREV*
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mRNA from alignment at chr_28:1017350..1031723+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_001050.1 ID=Ec-28_001050.1|Name=Ec-28_001050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=14374bp|location=Sequence derived from alignment at chr_28:1017350..1031723+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TGCCACATCTCTGATCTGTTCCCGTTGCCTTGTCCCGGTCGTACAAGGAG
CAATCAGGTCAGGGCTAGGGTGAGGGTTTCATGGAGACAGAAGGAAGCCG
TTAGATTTGCCGTGCTTGCGGTCTCGTGGGATAGGGTGCTACAACAAGCT
GCCGATCCAGGGAGCCAACCCGATCACCAGCGGGCAATTCGGGAAGAGGT
CGTGCGCCGAGAGTGTTGCGGAGGTTTTTTGTTGGCGAGCCATGGGAGGG
GTACCCAGCGTGCTGCTTTGCCTTTGGTGTCGAGGGGGGTGCTCGACGGC
GACGGTGGCTGCGGCGCTGACGTTCTTCCCTCCAAGCCCTCCATGCTACG
CGGTGAGAGATCGCAAGCACCACCGAACACCGGACAGATACTCTACAATG
TTGATCCTCTCTTGGCTTTTTTGGATCAGTTTTTTTCTGTCTCTCTCCAT
CACCGTCTCCCCCCCCCGCCCGCAAACCTGTTGGTCGTTCGAGTTCAAGT
TTGGAGCAACACTGCTGTGTGAGCGTGTGGTAATGCTCGCCGCCGGGGCA
GCGGAAGGATATTCCTTGTCTAGAGCAAATCCTGTCGCACTTAAAAAAGG
TTGTGCACACTGACTATTTACCGGGGTTGAGTTAAGCCACTAAAATCCGA
CATCCGGCACAGCCCGAACTCTCCGGTACTATTTATTTAGCATTCTTGTA
GGAAACTACGAAATCACTCCGAACCCTTGGTTTTTGCTCGAAGTGCATGC
ATGCACACAGGATGTTTTATAAGTGAGCGATCCCTGTGTGCCACTGCTTT
TTGCAACAACTGCTCTGTGGCCGTTCATCATTGATTGTGGGTGGCGGGTA
ACTGCCGTTGTTTCCATAGCACATTGCCGGCACGTTCCCACATCGACAGA
ACTTGAAAGACAGCGCGCTCGAAGACCTGGAGCAGATACAGCAGTACTAG
CTGTCAGCAGGATCCTCAAAAACCCATGGTTTTTCATCAAGAAACGCGCC
GCTGCTGCTGTGTTGCATCGACCTGTGTAGCACGGCGATCCGAACGAAGC
AGACCAAATAATCATTCCTCTTCCACGAAGGGGAAGCGAAATCTACGCAT
GCAGGTATATATGCACATATGCAAGACTGGAAGATGTAGACTTCACTACA
TAGTTGCCGTCGTTTACGCCCCAGCCTCCTTACAGCAGTACAGCAGTATT
CATGTACATAACCGCTTCAAGCTTTCAGGTTCGCGAAGTTTGGATTTTTG
CCCTTTTATTTACAATACACATCGATAGGCCAATCATTTCCCTTGACAGC
AGGCAAGAATTATATTTTCCTGCACAGAGAGGAACTTTTCGTAAATACTT
GTTCTGAAGCCCTTCGAAATTGCGGGCGGAGATCCTTGTTGCACGCAGTC
TTACAATAGTTCATTGTCTATGTACCACCCACCACTTGCGCCTGCTGCTG
CTATTGCATAATACATACTAGATTTGCTTATAGTACACCATCCGCAACAG
CAGGGGGTGATCACAAGGCGCCACATGCTGCAACCATCCAGAGGCTTGAG
TAACTTTAGTCTCGAAATAGTTCTGCCAGCGTGCTGCTTTTCTCGCGGGT
GCTGTCGAGCTCTGTAAAAACCTTCACGCGGGTCAATGCCCTACTGCTGC
CAATAGCCCGAATGGTTGGAGTGCATAGCTTTTCATGACGGATGCTCTAC
AACGTGATTACGACACGGTCGCGACAAGATATCTCGGCAAACCGCTCTGA
GGAACACCAGGGATGTTGACAACAACCGCCACATTTAGATGTATATCATT
TGAAAACTTTCCGTGATCTACTGATGTTGTTTACCAACACCAAACAAACA
AGAAACAAGCTAACATGATACAAACTGAATGCTATGCCCTACCTACCGTG
CACCAGGTGTAATTCTTATCTACTGTAAGCATCACTGATGAAACGTTACC
CTAAAGGATCAAATACGTTTTGTAAATTCAAAAAACGGCGGGAAACAACT
GCTGCCCGTGAAATTAAAAAATCTGTAGATTTGAAAAACGAGTTATGTAC
TGCTGTAGCCTTCGTTCCATCTTGCATGATTTTTACAATATTATTCCTAA
AATCTAACAAACCAGCAAGCTGTCAATAGACACTGCGCCGTGTCCCCTGC
GAAGGTTACATTTTACAATACACGACACAACGGAGGGATTCTCCCCGATA
TTTTGTCGTTGACCCAGTAGAGAACTACAGGGGATGTATGGTAAAATGTC
AGTTACCTCTACAGATGTTTTTCTACTCAGCACCAGCTGGCATTTACTGA
TATAAATCATCAGTGTATAGGCTTAAAAAGACTCGAAATAAGTCCAGTAC
CCAGCCGGTTTTCCTCCACTCACTGAAAAGACTCCACCACATCCCGTTCG
ACTGTGGGTATATCTCGAATGGGTAGTCTTTCTGTGCGTGTATTTATTTT
TCCTTCAAGCCTTATGAATTGCTGCAACACAAGAAGATTGGTCACCCGCT
CTTGCGGTGAATGAATTTCGTGGCGCTTTGGCGTATCACGAAGAAAATGG
AAAACCCACTGCTGCTGCATGCATATACCAACGGATGTTGCGCACTACTG
CTGTAGGTTCGCCAGCGTGTCGCCCTCGTCGAACGCGTGTTCTAGAAATG
CGAAGTTCCACAGAATGTACGAGGCTATGCGTACAGCTGTCGGTAGATCT
GAAAAGAATGTTGTCCGAAGCACGTGTCGGGTGACGTCCGCGACTCGCAA
TGATGAATATGCTCCAAGTGAACGACACGCCCGCCCGTATCCTTTCATCA
CGCGGTAAAGGCAGGCCTTGTATGTAACGCCTCGAGGCGTTGGCCTACTG
TTTACGGCGGTGGATTCGTTCCCCTATAATGCATGTATACCTCTCTGTGA
CGTGATCGCCTGTAGCACCCGAGGTGACAACCCCCATTTGTCTCTCGTCA
CTCGTAGTTCCTCCGTCCGTCCTACATTTTTTTTTTTTTTTTGTCTTCAC
TTATAATCAGCGCTCACAGCACTAGTGCCGTTTACTTCAACCCGTGGTCA
CACAGAAGAGCCCCTCTCTTCCCTCTGTGTACACACGAACTAGCGCTATC
CACTAGGCCAGGAGCGGAAGCGAGAGAAAAACTCACTTTGCAAGAAAAGC
TCGCTTACGCCGGGATTCGAACCCCTGACCTGACCTCTAGAAGGTTTCGA
GGATACCAACTAGACCACCGGGGCGACCGGTCACCATTGCGTACGTATGA
ATCGGCGGCGGCCAGATCCGTACAACCTTTTGTTGCAGCTCGGAGTTTGG
AATCTCGAGCCGTATATGAAAATCCTACTCTTCTGGGGGGGGGGGTCGGT
TACTGGTTCATCCATCCAAAAAAAAATATGCACCCACTCCTTTTTTACAG
ACGGAAATCCTTTGTGAGGAACGAGCGTCACAAAAATGTATGCGTTTCTT
CCACCTGTCGCTCTACTACAGGCAGGCGCAGTGTTCTGCCCCTCCAACTA
GCAACTACATGAAACCGGCTAAAATCCCTAACGCTAACCATAACCCCAAA
TCACCCCAATGGGTGCTAGGTTGGCGCTGGGTTGTTCAGTTCTAGGTTGG
TGTGCCTGCATTGGGGCAAGGTTGGCGCTGGGTGGCTCGGTTCTAGGTTG
GTGTGCCTGCATTGGGGCTACGTTGGCGCTGGGTGGCTCGGTTCTAGGTT
GGTGTGCCTGCATTGGGGCTACGTTGGCGGTGGGTGGCTCCGTTCTAGGT
TGGTGTGCCGGCATTGGGGCTACGTTGGCGCTGGGTGGCTCAGTGCTAGG
TTGGTGTGCCTGCATTGGCGCTAGGTTGGTATTGATGGGAAAATCTCTAG
GTTATTGCGTGCATAGGTGCTAGGTTGGTGTTGACGTGGGAAGGTGCTAC
ATAGGTTGTGTAGGCCTAGGTCGCTCTTGGTTGGGTGGTTCCGTCGGTAA
TAGAAAGGTGTGGGTGCATGGCTTATTTGCGTCCCATGGGTGCGTCGAAT
AGTTTTCATCCACCCATACGTGGTAATCCTTTGCTGGCATTTCTGAGCCA
GGGAAGTGAAGAGCCGGATAAACATTAGCATTTTATGTCCCACGAGAGGG
CTCGCCGATTCAAATTTTGGAAGCACGGCTACCCACCACCCGATTTTTTC
GGGCGCTTAATCCAGTTTGGTCAAGGCGTTTATTGTATAGGCCAGAGTAT
TAGTACAGGGAATAGTAACGTCTATATGTTTCTCATTGTATAGGCTTGAG
TATAAAAACCATACACTACGACGTGTGTATGGGATTAGGTATGTGTGCCA
AAACGAATCCTACATCATAGATTATCATATGCCATACGTTTTACTAACCA
CGCAGTCTAAATCCCGCAAGGGGTGTACAAGTTTACAAATACCTAAACTA
ATTCCTATACAATAAACAATATATACGTTATACTATACCAACACTAAATC
CTAGTTGAGCACCATACACTATCTCCAGACGTTGGGAACGTAGAACTAGA
AAAGGAGATCACTGAGGACGAGGTTGAGGCGTGTGTGAACAAGCTGCAGT
GCCACAAAGCAGCAGCGGCGGATGGGATAGTCAACGAGTTCATGAAGTTT
GGGGGGAAGGGGATGATCCAGCTGATGGTACTGCTGTACAACTGGGTGTG
GAAAAAAGAGTATGCGCCAAGTAGACGGAGGGAAGAAGTGGTTGTGAACT
TGTTTAAGAAAGGAGACAAGACTGACCCAGGAAAATACAGGGGGTATCAC
ACTGTTGAACACAGTAGGAACAAGTGTTCTGTAAGCTGCTGAACGATAGG
ATGGGGAGAGCATTGGAGAAGGAACGTAGCATTAGTGAGGACCAGGCAGG
TTTCCGACAGAAAGAGGGGGTGCGTAGACCACGCATTCACGGTAGGGAGA
ATCATCCAAGGTAGAAAGAGGGCGGGAAAGCCGACATGCTGCTTCTTCCT
GGACGTGAAAAAGGCATACGATACCGTACGGAGAAATGGGCTGTGGAAAC
AGTTGTCCAAGTACGGGATCAAGGGGAAAAGGTGGAGAGTGCTGAAGAAG
ATGACAGAGTGTACGAAAAGCGCGGTCATGCTAGACGGAGAACTGTCTAC
ATTCTTCGACATTGAGCAGGGGGTCCAACAAGGTTGCACGCTGTCCCCGA
CGTTGTTCCAGGTGTTCATCAACGATCTGTTGGAAGTCGTAGAGGCAGTC
CGGAAGGGAGTAAAGAGTAGGGGACACGGAAACTTCGGTGTCAGGAATGC
TGTTTGCGGATGATTTTGTTGGTATGTCGGACACCCCTGAGGGACTGCAA
CTGCAAATTGACGCGGCGAAGAAGTTTACTGATAAGTGGAGATTGGCTGC
CAACGTCAAGAAGAGTGCCGTCATGGTATGCAACGAGGACAGGGAGGAAC
CAGTAGAATATAGATGGAAGTGGGGGATCGAGGAGATTGCAGTAGTGGAC
CAGTACACATACCTCGGAGTAGAGATCGCAAACGACTGCTCGTAAAATGC
ACACATGCCCAAGGTAGCGGAAAAGGGCAAAGCACGAGCAGGGAAGCTGC
ACCCAATACTCGCAAACCGGCACCTCGATACACGCAGCAAATTGGCGGTT
TTGAAGAGCGTAATCGTACCGCCGCTAGAGTACGCCGGAGAAGTATGGGA
GGGAAATAAGAAGGTAGTGAAAGAACTGGAGACGGCGCAGATGAAAGCAG
CGAAAATCATCCTAGGATGCTCCAAGCGCACAAGTAATTGATAATTGGGG
ATCCAATCCCTACGGTCGGGAAGAGACGCAAGGAAGCTGACATGGCAGTA
TCGCATGCGCGGGATGGGAGAGGAGATGTTGCCGAGAATAGTATGGGAGG
CGAAGTGGGCAAACAAAAAGAGGGGCAGACAACCCACGGAATGGGTCAAG
GTTGTAGAGGACGTATGGAAGGGGTTGGACATCGACGAAGATAGAACGCT
GGAAACGGAGGGTCTTCAGGTGTTCAAGGAGAAGATATCTGTTGCTTGTG
CCGAGAGAGAATAACAGAATCTAAGGAAAGAAACCAAGGATAAGGAGGGT
CTAGAAGTGTACGGAATGTTGAAAGAAGGANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATAGGCCTTCGAGAACTT
CGACGAAGACATAGGACGGTAGACGACGAGGACGACAAGTTCAAATGTCA
TTGCGGCTTCGAATGCGAAGACCGTGTTCATGTAGTCGCGGAATGTCCAT
GGTACGAAGAGAAGAGGGAAGTGTACATGACTGAGCTGGGGAAAAATAGA
AGGGGACGTACAGGGAGATGCTTGAGGCATGGAATAGAGAGGAGAGGGCA
GTAGCTGTACTGGGGAGTAGGAAGTGGTTTGAAAAGGCGGGAGGGGATAT
CGTTAGGATAGATAGACTAGGGACGACATTTTTGAGCCACCTTTGGCAAA
GTAGGAAGGAACGATTGGCCATCGTTGATCGGTCCTGTGGGAACAATGCT
CCGTCCTCTCGAGGATGCGTGGTCAATGGTCTAACCGCTAAGGCATGCAA
AACGTAAGAATATGCCCCCTCTCCCTATCTCCATTGGTCCACAATCCAGT
TTGGGGCAGTGCCTCCAAAATTTGGATCCGCGAGCCCTCTTGGCCCGACT
GCTGTTCCGCTCTCTACAGCCACAGATCTCTGATGTGCGAATTTGGTAGC
ACACGGAGACCAGATGACTTAATATACCATATCATAGAATGTGTCGCTGC
TAGAACTGCAAACGCTGTGAGTTAGCTAGTTCGGCGATATCGCGTTTTTG
TGGAATCTCTCCGCTTCTTTTCGGTTCGCCAAGAAGGGATAACAAGAGCC
GTTACGTCTCCGGGCCCTGTTCCCGCGTGCGTGCAGGTTTCTTTTTTTTT
CGAGGCATGTCTAGTGTCTAGTATTAATAGGCTACGAGGCGTAGCATACA
GTATGTTGTTCTTCAGGCCCCGCTTGGGAGAACCGCGATCTCTTCTTGAA
CATGATATCTGCGTGACACAGGCGGCATAGCAGCAGCGCGAGCAAAAGAA
AGCCATCGAGGTCCAATTCCCGTTTTTGTTTGAGGTCTGAAAAGCGACAA
CCAGTTTTATCATCATCGAGGACTTGTCGAGGAAAGTGCTTCGTGCGCTC
AAGCTGTGCACATGCCAAGTATTCATGCATGCCAGACCTCTATATCCATA
CTTAATCCAATATACCAATAGAAGGCAACCTTCCCGCCGTGTCTCACGGC
ACCTGAGTACTTCAATCGGTAGAGGACACCAAAGAGACGTCGTGTTTGCT
GGCACGTTCGGGTTTGCTGTTGGAGCTGAAATATCGAAGGTCGCAGGTCG
TGGTAGCGGCCAACAATGTCCGCAAATTTGAACAAGTAAGACCAACACCC
CTTGTTTTCCTGAGCGCACGGAAGGGGCTGTCGAATCTGTGGGAACGGAC
TTGTTGTGCTTGTGCTCGCCGCCACGGACGGTAAACCCCTGAACGGCGGG
TGGTCAGCAGTACAATACTAGTTCGTTCTCTTCAATTGGTCATCATTCAT
GATTGACAGCGTTGATTGTTTGTTTTGCCGGTACTAATGCTCTCCCTTCA
CGACGGCCACTGCTGATGATGCATCTGCCACGTGCTGCTTCACGCTCTGT
TCATCGTGTGTGTGTGTGCTGTGCGTGTGATTGTCACAGCTGAAAAGAAA
GGAGGGGAGCGAGGAGCTGGAGATGGTCGTTGACGAAGTCTTGGAGGTGC
GTTGTGGTGGCATCGATGATCTCGTAGGGCGTGTTTGTTGTCGACGGATC
AAAACAATTTTGGACATGCTTTTCGTCTCTTGTTGTTCTTGTTCTTCTTG
TTCTGCCGATGCTGCTGTCGTGACTGTTGCTGTTGCTGTTGTATGGGCTA
TTGTTTCGTATGGTTGAGCTGTCCGACCTGCGAGTGCAGAGAGAGGTGCG
ACGCTCCGTGCCCAGCAGCACCCACGCATGGATTTTGTCGGCAACGCACG
CCCGTTTCACCTCGTCTATTGGCCTCCTCGCGTTGCAAAGGTTGTTTTTC
GGCACGTCATTATTTTCTCGTACATGCGTGCACAACGTGTGTGTGGCCTT
CCTGTAACCCCCAGAAATTGTATCTACCGAAAGATGTAAAAGACAGACCT
CCAGAACAATAGGACGGCCAATAAAAATATAAACATAAACGCGAAAAGAA
GTATCTTAGCGGATACCGCAGTGGAGATCGGCGGCATGTAGTTGCCGATA
TGTATGTATGTTGTTGTTGTTGTTGTTGTTGTCTTCACATGAAAAACCGT
TCTGATCTGTCTCTACCCAGTACCTTCATATATCCATACTGATCCAACAC
TTGACCCAACACTTGACGCGGTCGATTCCCGTGGTCACAGGCTAACGTAC
ACTCAAATAAATTGGCCCCGAGGGGTCCGCAAGTCAATAGAAGTTAACGA
CAGATATATATAGTATGTACGTGTGTTATCTTGCTTGTTCTTTTTTTCCT
CAATGGAGTAGGCCCAGGCGGCAGGTTTCACGGAGTGGTTTCCTCCGACC
GGCGGGTGCGAGAAAAACAACTTGTATTAAACACCTCCTGCTTTACCTGA
GCCACCTTGGTAGAGTCGGGTCTTTTGAGCCCATCGGGTCGTTCATCGCG
CATTTTTGCGCCACGCGAATTAGTTCGATTCCTGCTTGTGCTCAGAGGTG
GCAAATGGCAGTTTTACCGCTTTCGGGTAGGGCCCCGCAGACCGAACGCC
AACGCTGTGGATATATACTCGCTAGAACGGCCTCGACGATAAGGAGCCCA
TACGTATCTGCAGCAGTGCCGCTTATATGGCGAGTGCGGGTGCCGTATAG
TCTACCTCTCCTATGTGCTCAGAATCCCTCCTCTTTTTTCACCGATCGGC
CGGTTAGACTTGTGGAAACCTTAACCTTGGGGCCTCCGGCCCTGACTAAA
AGTACAGAGAACCTGAAGGCTTCGCGATGGACTAGCTGGTTTCGAGCCCC
CCCCCCCCTCACATACACCTGCAATGATCTCCCCTGCCCCCCCCCCNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAG
GGAATTAGTGGTTTTGGCCCCCCCCCCCCCTCCCAAACACGGGCAAAGAT
TTCCCGGGCCCCCCCCCCCGTGGAAAAGAAAGGGGGTTGACCTTTTTTTT
TTGTCCCCCCCGAAATGGCCTGATGACTTGTCATTGGGTAGCCGTTTAGG
TCGGTGGAGGCCCCCTAACTAGGCTCCCACGCCCACATTTCCGAGTTTGC
CCCCCGTCCCCGCCCTTTTCAGCAGCAGTTTTGCCCCCCCCCCCCCCTCA
GTACTCTTGCAGAGACAGGGGGGCGTCAAACGATGAACATGTACGTCTTG
ACGCCCACATGTATCGCATTCACCAGCCATAGGAAGCCGAACGACCGCGG
GTCCTGGAGGTGGTTTAGCTCTTGATTGGCGCATCTTGCGTAGCAGCGGC
TCATGTAGCTGCTGTCTTGACAGCAGGTGGCACTTTCCTGGCTGACCGCC
TCTCTCTTTTGCACCATGACGCGTGTGACCACCCAGGCAACGGCGACAAC
CGAGGGCGTAGAAATCGCGACAATCGTCTCCGGAGTCAGCGGGAGCCAAT
GCGGAGAACCGGTCTTGACGGCGGTCGCCAATCCAAACAACAAGGGCAAA
AGCAACAGCAAGGCAGCCGGGGGGAAAGGGGGCGGCGGTGGCGGCAGCAG
CAGCGGTGGCTTCGCCAAGGTCGGGAAGATCGGGGGAGGCGGGCGGGGGT
CCACCATCCCAGTGGCATTGTACCGCACGGCGAACGCCAGGTACACGCTT
GTCTACAGCCACGGGAACGCGACCGACATCGGGGCGATGCACGACCGGTG
CGCGGGGATCGCGGAGGCCGTCGGGGTGAACGTTCTGGCGTACGACTACA
CGGGGTACGGGCGCGCAAGGTATGCATGTGTACATGGTTGGTGCGTGGGA
GGAACGCGCTCTCCCCGTCACGCTTTTTCTCTTTTTTTTTTTTTTGGCTC
ACAAAAACACGAGGGAATTACTTCATCTCTACCCACAGACTAGCGTCCAG
GATGAATCAGCGATGAGTTCATGTTGTAGCTGTTTTTATTGCTGCGAGTG
CTTCTGTGTGGCCTCTTGTACCGATTTTGGATCGGTCCTTTTGATGTCAC
GCCCTGTCGTCTGTGCTTGCGTGGTCTTGATTTTTTGTCGGGCACCCCAT
TTTCAGCGGTCGCAGGATAGCATGTAAAACCCACATCATGTGTAACACAG
CAGTGATAAAAACGACAGAGAACATTCCACACCCGGCGACAGTATTGGGT
TCCCATGTGTGTGGTAGCACCATGGTGTTGGTCTTTTTTTTTTTTTTGTC
GAAGGTGTGTGTTCACGTGTAGTCTCATTTTGCTCCCCTCGGTCGATCGT
GGGAGAAGGGTCTGGTGCGAGGTCAATGGTCTTACGACTACAGGCATGGA
CGACTATGACTACACCGCCCGCCCGCTCCCTGAACCGTCATCCACGTGCG
TGTGTTTTTTCTGTCCTTGCTTCTTGTTCGAAACAGCGGCTCTCCCACGG
AAGCCCGGACGTACAGAGATATAGAGGCGGTGTGTGCGTGGGCGCGAAAA
AATGTGCTGCAGGAGGGAGAAGACGGCAGCGGGAAAAATAAGGTGAAAAA
AGCATCCTGTTGATGTTGAGATTTGAATTAAACCTCACAGGATCAAGGTA
AATACACGATGTGATGCGATATACTGGTACGTGAGATTTTGAGGCCGTAT
GTTCCCACCTTTGGAAAAATATACAGATACTGCTGTGATCGGTCTTTTTA
CGCTGGAGACGTCGTTTGCACGCCCGGCGACTCGTCGGTACAATCAGCGG
CGTTTTCCCGTACAAAGCGTGTGGTGCTCCCCCACCCTAACCCCCCCCCT
TTGGCCAACTAGGCAGGAACGATCTGCTGTCGGTGATCGGTCCTTTGGGA
ACAATTGTCCGTCGTCTCAATGGCCTAACCGCTAAGGCATCCAAAACATG
AGAGTGCAGCGCACACCCCTCCCTCACGCGGGAGCGCTTTCTGATGCATG
CATGCATGCCCCCTGCCTGATGAAGTAAGTTTTTTTTGTTCGTGGCGAAC
TTTCCGATTTGGAAAAACATTTTTCCCTCCCTCTTATCTCAGGGGCATGG
TTTGATCCTGTACGGCCAGAGCGTCGGAAGCGGTCCCACCTGCTACCTGG
CCTCGGACAAGTCCAAGGGACCCTTTGCAGGTGAGATGGACGCAATCGTC
TGCCTTTGTGCCGGGTTTGCTTGATATTTGTGTGTGTGTGTTTGAAATTA
GCATCGAACGTGCTACAGCAGTACACAGTAACCGGCTGACCAATGACAAG
ACGCCGTCAATCTTTTGCGGCGTTTTAAAGAAAACGCTTTCTAGGCCAAG
GGTCCTCTATCGTCAGGGGGGGGCGCAGATGTTGGGCGACAGTGTATGCT
GCTGTACACGTGTTACTGTTCATCATTTGTATCTTCGTCGCTCATCGGGT
GCCCGATCAAACGACGCCAGTCCTAGCGCGTAAGAGATGTGTGTGTATGT
TACTTCAATTGCCATCGACGGCACTATCGGGCTGGCCAATGACTTTGACG
TCAGCTGTGTTTGTGCATTTCTTCTGTTTTACGTTGTATTGACAAGAGAC
AGAGACAGAGAGAAAAGGGATGGTGGAAGAGTTCCGTAAACGATGAGATG
CACGGGAATTTCCAGTGCTGGTTTTGGCCGCAAGGCTCGCCTCCCCTACC
CAACTACTACTGACGTGTCTGTCACGCGGAGCATGCGTTGGTGTACATGA
CGCGGCAGGGGCAGACGAACAAGAAAAGGCCTCCCCTCCCCCCCTTATTT
CCAGATTATGTGCTTGATGCAGCTGCAAATCCCCCCCCCCCCCCCCCCGC
CCCGGGAATGTGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGAGGGAG
ATGTATGGAATGCATGGCGTACGTAGCGGCAACGGCACGTGTGGTTGGTC
GGACTCGCTCTTTCTATTGTAGTTTTCGAATAGTGGCCGATGGCCGGGTC
GTTTTTTTTGTAACAAACCGTGTTGAGCGTGCTACTACGGGTGGGTACAC
GTGGAGTTATCCTGTGCCGTGGGAGTTGTCCTGTGGTGTGTCTCCCATGA
TGGAAGGCAGGCCAGCCTTTCGAGCAGGACCGTGGTCTATTTATAGTTCG
AAACCGCTGGAGAGCGGGCTACGGTGTGACCGCTGATTCAAAGTCATTTA
ACAAAATAGAAACAGCAGCGACTAAATCGTCCGAAAGTGACAGATGCGCG
ACGTACCGTGTCCTCGTGTTGTGTTGTCGCGCCTCAGGTGCCGTGGGAGC
ACGGCAAGGGGATATTCGAGGCCGTCCCCGAGCCGTTGAGGAGACGCCCC
TGGTGGGTGCCGGACAGGGGCCACAACGACATCTGCGAGGGGAGACGTCA
TCTGAGGTTAGCCCGCACCGAACGCTGGCGTTTCCGCTCAATAGTCTCGA
CGGGTGCTGCAGGCCGCCTCGAGAGACGATCGATCATTTATAAGCAGATC
GTTTTGTTTCCATTTTTGGTGTTGGACGAAAGTCTTGTTGCAGCTCTCGC
CTAGATAGCGTATTGGGACAAGAATGTGATGCGCTCGGCGGATGGTTGGT
CGCCCATGCCAACTGCCCACCCCTGTTCAGGGTTCTCGTCGCAACTTCAC
GAATGTTTCTTGACGGCTCGAGGGGGTCGCTTTCCCCAGTGGGTGTGAAC
CGACTTCTACCGTCTTGCCCTGCCGTTGCCGCATTCCGAGCTCTCAATAT
TCCAACGCAGCTCCTTTTTTGAGCCTCACCCCCCCCCCCCTAACCCCCCC
TCTGCTCGCGCCACGCACGAACTCTGCTCTCATCGTGGGTTGGCCTTCTC
AGGGAGTACTTCGCGAGGGTTAACGCCTTCCTCAGAACGCTCGACCGAAA
TGACCCCCTCTCAACCGCAGAAACGTTACCCGCTACCGCCGCTGCCGCTG
CCGAACCGATAGCGAGCGCCAGAAAAAACCCCCCGGCCGCCGCCGGGGGG
GGGGGGGGCGCGATCCCCAACGAAAGGGGCCCCCTCCTCCCGGGCCCCCC
CCTGGTGGGGGGGTCCGGGGGGCCGGGCCACGGCAACCGTGGGAACGCAT
TCGTGAACAGGGGGGGAAAATGAACAAACCAAAGGGATAAAAGTGTGGGG
GGGTCCCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTTTTTGGAGGCCGGGGGGGGGGGCTTTCCCCAGGGGGGG
GAAAACGAATTTACCCCCTTGCCCCCCCCAGGTCCCCCATCCGAAGTCCA
AAATTTCCAAAGGGCGCCCTTTTTAGGACCCCCCCCCCCCCCCCCTTACC
CCCCCTTTGGCTCGCGCCACCCACGACTTTTGCTTTCATCGTGTGTGGCC
CTTCTCAGGGAGTATTTCGGGAGGTTTAGCCCTTTCGTCAGATCGCTCGA
CCGAGATGACCCCATTTCAACCGCAGAAGCGTTACCCGCTCCCGCCGCTG
CCGCTGCCGAACGGATAGCGAGCCCCAGAAAGAACCCCCCGGCCGCCCCC
GGGGGGGGGGGTGCCGCGATCGCCAACGACGGGGCCCCCGTCCTCGCGGC
CTCCTCCGTGTTGGCGGCGTCTGGTGCGCCGGCCAGCGGCAGCGGTGGCA
GCGCATCGGTGAACGGGGGGCGATAGTGACGAAGCAAAGGGATTAGAGGT
GTGGGGGCGTCGTCGGGTGTTGAGGGACTGGCTGCCGTTTCTCGAACGGC
CGGTTTTATTGGATAGCTCAACTTTTAGCTTTTCGAATGAGAAAAGCCAA
CATATTTTCGAGAGAAGCCAGTATTTTTTGTTTGTACTCTTGTTTTGTAG
GAATTGGCTGTTAGTTTTTTCTTGTTTTTTTTTTTTTTAGTAATCATGAA
GTTTGTGCAACGCTTGTTTGTCGTCGTTGAGAGTGGGCAGGCTGTGCCAT
CAAAACCCGTGGGGAAAGGGTTTG
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Coding sequence (CDS) from alignment at chr_28:1017350..1031723+

>Ec-28_001050.1 ID=Ec-28_001050.1|Name=Ec-28_001050.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=885bp|location=Sequence derived from alignment at chr_28:1017350..1031723+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGAGGGGTACCCAGCGTGCTGCTTTGCCTTTGGTGTCGAGGGGGGTG
CTCGACGGCGACGGTGGCTGCGGCGCTGACGTTCTTCCCTCCAAGCCCTC
CATGCTACGCGCTGAAAAGAAAGGAGGGGAGCGAGGAGCTGGAGATGGTC
GTTGACGAAGTCTTGGAGGCAACGGCGACAACCGAGGGCGTAGAAATCGC
GACAATCGTCTCCGGAGTCAGCGGGAGCCAATGCGGAGAACCGGTCTTGA
CGGCGGTCGCCAATCCAAACAACAAGGGCAAAAGCAACAGCAAGGCAGCC
GGGGGGAAAGGGGGCGGCGGTGGCGGCAGCAGCAGCGGTGGCTTCGCCAA
GGTCGGGAAGATCGGGGGAGGCGGGCGGGGGTCCACCATCCCAGTGGCAT
TGTACCGCACGGCGAACGCCAGGTACACGCTTGTCTACAGCCACGGGAAC
GCGACCGACATCGGGGCGATGCACGACCGGTGCGCGGGGATCGCGGAGGC
CGTCGGGGTGAACGTTCTGGCGTACGACTACACGGGGTACGGGCGCGCAA
GCGGCTCTCCCACGGAAGCCCGGACGTACAGAGATATAGAGGCGGTGTGT
GCGTGGGCGCGAAAAAATGTGCTGCAGGAGGGAGAAGACGGCAGCGGGAA
AAATAAGGGGCATGGTTTGATCCTGTACGGCCAGAGCGTCGGAAGCGGTC
CCACCTGCTACCTGGCCTCGGACAAGTCCAAGGGACCCTTTGCAGGTGCC
GTGGGAGCACGGCAAGGGGATATTCGAGGCCGTCCCCGAGCCGTTGAGGA
GACGCCCCTGGTGGGTGCCGGACAGGGGCCACAACGACATCTGCGAGGGG
AGACGTCATCTGAGGGAGTATTTCGGGAGGTTTAG
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Synonyms
The feature 'Ec-28_001050.1' has the following synonyms
Synonym
Esi0590_0003
Esi_0590_0003