Ec-28_000810.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000810.1
Unique NameEc-28_000810.1
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length1032
Homology
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: A0A6H5KGG6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG6_9PHAE)

HSP 1 Score: 1298 bits (3359), Expect = 0.000e+0
Identity = 817/1053 (77.59%), Postives = 843/1053 (80.06%), Query Frame = 3 
Query:   51 MATTFSGCWPWWPMRRARRSEREAPRGVSRKVKSRFTTVRMPAQVSSAGPAGGGKPHSPCGGGSGGEEKSSASYAAVGAVAGLETGRDGESSGG---KHPSQQKDDGDSQPAAAVAVKVRKGGLFGVLRRTTVGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHMYHQRCIHEWLGSHKSCCVCMADMEEMARATKKPSRRHRRRSRARPATILERSESLRSESGYSSDQARSTLSSMSAPAALADRLPADSGR---PQASGEPPPLPLPCTLQPRIGGTSDAGPSWTWHQPRGHGRASGVGGRPAESRAAPVGRSPTPIPRSSLLNPRWPRNPRSPAARSTVITRRRTAAVLGFSSPPAVSTTSPGPSAAAGAA--ASLNTRLTPVSEWTLQSGADGSRERKTSGXXXXXXXXXXXXXXCGNTSSIDSSDGEDQSPSDRAAQFGKFGGNRPSGPYSH----------NTFLSGRSSERAGRPAVQLSPSFRPSARSSRSPQRSGLLDRYPRGRHLSPAAVHDRAAAAAAARPRSASGSSPLLPSRTEIVRPTPRA----SSTPAXXXXXXXXXXXXXXXXXXTSPTASPSNREQAVLQRISAPESPRSGFPSAVATLSTPQRMRRKSYTQPATSFSVEDTLLLASSGLTASASGTSPAPATPQRRWEASPSTPRNWPTMTSSASNTPSSRHRRIRQWDSTQLRGVVGAGGPAAGKRYGGEPGRSQSWGERKETEAEEERHGGGVSGFGGWSGRVPGEGAAARVYVGAKLEQPLGVGVRRAGGGRGRASAPLTESSPSSGVVLRRSWEERKFSTKDEXXXXXXXXKRRTSREKDEGVARPRGVASFGVGVSTEGEPXXXXXDGGSPPSTPLSAKPPGCDWDSPVPAAGGLDGRRSRATRAEEEDRWLEDFLEKSPPSEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHTWSSTTSPRPHAPTIAEAKRHPPASSSPSLAVVVSTGGPKSRPEPWKPREDVSGGDTPSLLTXXXXXXXXLRARSESAPMIWD 3143
            MATT SGCW WWPMRRARRSERE  RGVSRKVKSRFTT+RMPAQVSSAGPAG G+PHSP  GG GGEE SS S AA+GAVAGLET   GESSGG   +HPSQQK+DGDSQ AAAVAVKVRKGGLFGVLRR T GGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQH+YHQRCIHEWLGSH SCCVCMADMEEMARAT                        LRSESGYSSDQARSTLSSMSAPAALADRLPADSGR   PQAS  PPPLPLP TLQPRIGGTS AGPS T+HQPRGH RA+GVGGRP ESRAAPVGRSPTPIP+S   NPRWPRNPRSPA RS V+TR                               ASLNTRLTPVSEWTLQSGADGSRER+ SG   XXXXXXXX   CGNTSSIDSSDGEDQ PSDR AQ  KFG  RPSGPYSH          +TFLSGRSSER+GRPA Q              PQRSGLLDR+P  RHLSPAAVHDRA AA A RPRSASGSSPLL +RTEIVRPT RA    SSTP+  XXXXXXXXXXXXXXXXTSPTASP N EQAVLQR+SAPESPRSGFPSAVATLSTPQRMRRKSY Q ATSFSVEDTLLLASSGL AS SGT  APATPQRRWEASPSTPRNWP MTSSA NTPS RHRRIRQ DS+  RGVVGAGGPAA  R+GGEPGR QSWGE+K+TEAEEE HGGGVSGF   SGRVPGEGAAAR YV  K EQPLGVGVRRAGGGRGRASAPLTESSPS GVVLRRSWE         XXXXXXXX     REKD+GVAR RGVA F VGVST GEPXXXXX  G             CDWDSPVPAAGGLDGRRS ATRAEE DRW EDFLEKSPPSEPGSHKTCSTQWSEM+SQSQGSGNSYAGST SSSAMSAHPAGRRSVH+ S+TTSPRPHAPTIAEAKR PPASSSPSLAVVVSTGGPKS PEP  PREDVSGGDTP+LLTXXXXXXXXLRARSESAPMIWD
Sbjct:    1 MATTLSGCWQWWPMRRARRSERETSRGVSRKVKSRFTTIRMPAQVSSAGPAGRGRPHSPSDGG-GGEETSSVSCAALGAVAGLETDIIGESSGGAIGRHPSQQKEDGDSQSAAAVAVKVRKGGLFGVLRRPTFGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHLYHQRCIHEWLGSHTSCCVCMADMEEMARATXXXXXXXXXXXXXXXXXXXXXXXXLRSESGYSSDQARSTLSSMSAPAALADRLPADSGRSDRPQASSGPPPLPLPRTLQPRIGGTSHAGPSRTFHQPRGHRRAAGVGGRPGESRAAPVGRSPTPIPKSLRPNPRWPRNPRSPARRSNVVTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLNTRLTPVSEWTLQSGADGSRERQISGTSSXXXXXXXXGSFCGNTSSIDSSDGEDQLPSDRVAQLSKFGEKRPSGPYSHRHTPRSHHASSTFLSGRSSERSGRPAAQXXXXXXXXXXXXXXPQRSGLLDRHPGVRHLSPAAVHDRAGAAEA-RPRSASGSSPLLLTRTEIVRPTSRAQGRASSTPSPRXXXXXXXXXXXXXXXXTSPTASPPNGEQAVLQRVSAPESPRSGFPSAVATLSTPQRMRRKSYAQRATSFSVEDTLLLASSGLAASGSGT--APATPQRRWEASPSTPRNWPIMTSSAGNTPSRRHRRIRQRDSSPRRGVVGAGGPAAANRHGGEPGRRQSWGEQKQTEAEEEIHGGGVSGF---SGRVPGEGAAARGYVRTKQEQPLGVGVRRAGGGRGRASAPLTESSPSGGVVLRRSWEXXXXXXXXXXXXXXXXXXXXXXREKDDGVARLRGVAGFDVGVSTAGEPXXXXXXXG-------------CDWDSPVPAAGGLDGRRSSATRAEE-DRWPEDFLEKSPPSEPGSHKTCSTQWSEMDSQSQGSGNSYAGSTNSSSAMSAHPAGRRSVHSRSTTTSPRPHAPTIAEAKRPPPASSSPSLAVVVSTGGPKSGPEPCNPREDVSGGDTPNLLTXXXXXXXXLRARSESAPMIWD 1032
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: D7G9G1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G1_ECTSI)

HSP 1 Score: 755 bits (1950), Expect = 1.820e-263
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 3 
Query: 1872 MRRKSYTQPATSFSVEDTLLLASSGLTASASGTSPAPATPQRRWEASPSTPRNWPTMTSSASNTPSSRHRRIRQWDSTQLRGVVGAGGPAAGKRYGGEPGRSQSWGERKETEAEEERHGGGVSGFGGWSGRVPGEGAAARVYVGAKLEQPLGVGVRRAGGGRGRASAPLTESSPSSGVVLRRSWEERKFSTKDEXXXXXXXXKRRTSREKDEGVARPRGVASFGVGVSTEGEPXXXXXDGGSPPSTPLSAKPPGCDWDSPVPAAGGLDGRRSRATRAEEEDRWLEDFLEKSPPSEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHTWSSTTSPRPHAPTIAEAKRHPPASSSPSLAVVVSTGGPKSRPEPWKPREDVSGGDTPSLLTXXXXXXXXLRARSESAPMIWD 3143
            MRRKSYTQPATSFSVEDTLLLASSGLTASASGTSPAPATPQRRWEASPSTPRNWPTMTSSASNTPSSRHRRIRQWDSTQLRGVVGAGGPAAGKRYGGEPGRSQSWGERKETEAEEERHGGGVSGFGGWSGRVPGEGAAARVYVGAKLEQPLGVGVRRAGGGRGRASAPLTESSPSSGVVLRRSWEERKFSTKDEXXXXXXXXKRRTSREKDEGVARPRGVASFGVGVSTEGEPXXXXXDGGSPPSTPLSAKPPGCDWDSPVPAAGGLDGRRSRATRAEEEDRWLEDFLEKSPPSEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHTWSSTTSPRPHAPTIAEAKRHPPASSSPSLAVVVSTGGPKSRPEPWKPREDVSGGDTPSLLTXXXXXXXXLRARSESAPMIWD
Sbjct:    1 MRRKSYTQPATSFSVEDTLLLASSGLTASASGTSPAPATPQRRWEASPSTPRNWPTMTSSASNTPSSRHRRIRQWDSTQLRGVVGAGGPAAGKRYGGEPGRSQSWGERKETEAEEERHGGGVSGFGGWSGRVPGEGAAARVYVGAKLEQPLGVGVRRAGGGRGRASAPLTESSPSSGVVLRRSWEERKFSTKDEXXXXXXXXKRRTSREKDEGVARPRGVASFGVGVSTEGEPXXXXXDGGSPPSTPLSAKPPGCDWDSPVPAAGGLDGRRSRATRAEEEDRWLEDFLEKSPPSEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHTWSSTTSPRPHAPTIAEAKRHPPASSSPSLAVVVSTGGPKSRPEPWKPREDVSGGDTPSLLTXXXXXXXXLRARSESAPMIWD 424
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: D7G9G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G3_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 8.050e-106
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 3 
Query:   51 MATTFSGCWPWWPMRRARRSEREAPRGVSRKVKSRFTTVRMPAQVSSAGPAGGGKPHSPCGGGSGGEEKSSASYAAVGAVAGLETGRDGESSGGKHPSQQKDDGDSQPAAAVAVKVRKGGLFGVLRRTTVGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHMYHQ 563
            MATTFSGCWPWWPMRRARRSEREAPRGVSRKVKSRFTTVRMPAQVSSAGPAGGGKPHSPCGGGSGGEEKSSASYAAVGAVAGLETGRDGESSGGKHPSQQKDDGDSQPAAAVAVKVRKGGLFGVLRRTTVGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHMYHQ
Sbjct:    1 MATTFSGCWPWWPMRRARRSEREAPRGVSRKVKSRFTTVRMPAQVSSAGPAGGGKPHSPCGGGSGGEEKSSASYAAVGAVAGLETGRDGESSGGKHPSQQKDDGDSQPAAAVAVKVRKGGLFGVLRRTTVGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHMYHQ 171
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: D7G9G2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G2_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 7.770e-60
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 2 
Query:  578 MAGQPQVVLRVHGGHGGDGEGNEETFPSAPPSFTGATSDDIGEIGEPEVGVRVQLRPGPLHAVLDVGSSRLGGQAAGRQRPTAGQRRTATATAALHAPAQDRWY 889
            MAGQPQVVLRVHGGHGGDGEGNEETFPSAPPSFTGATSDDIGEIGEPEVGVRVQLRPGPLHAVLDVGSSRLGGQAAGRQRPTAGQRRTATATAALHAPAQDRWY
Sbjct:    1 MAGQPQVVLRVHGGHGGDGEGNEETFPSAPPSFTGATSDDIGEIGEPEVGVRVQLRPGPLHAVLDVGSSRLGGQAAGRQRPTAGQRRTATATAALHAPAQDRWY 104
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: A0A852K9N4_UROIN (RN128 ligase (Fragment) n=1 Tax=Urocolius indicus TaxID=458196 RepID=A0A852K9N4_UROIN)

HSP 1 Score: 72.0 bits (175), Expect = 9.930e-10
Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 3 
Query:  474 PAGEICVICMEPFQANDVLEVLLCQHMYHQRCIHEWLGSHKSCCVCMADMEEMAR 638
            P GE+CV+C+EPFQ  +V+ VL C+H++HQRCI  WL  H++C +C  D+  + R
Sbjct:  246 PDGEMCVVCLEPFQPKEVVRVLTCKHLFHQRCIDRWLLEHRTCPLCKWDIFNVLR 300
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: UPI000529C18B (E3 ubiquitin-protein ligase RNF128 n=1 Tax=Colius striatus TaxID=57412 RepID=UPI000529C18B)

HSP 1 Score: 67.4 bits (163), Expect = 1.960e-8
Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 3 
Query:  474 PAGEICVICMEPFQANDVLEVLLCQHMYHQRCIHEWLGSHKSCCVCMADM 623
            P GEIC +C+EPFQ  +V+ VL C+H++H+RC+  WL  H++C +C  D+
Sbjct:   88 PEGEICGVCLEPFQLKEVVGVLTCKHLFHKRCVDPWLLEHRTCPLCKWDI 137
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: UPI00033387D2 (E3 ubiquitin-protein ligase RNF133-like n=1 Tax=Echinops telfairi TaxID=9371 RepID=UPI00033387D2)

HSP 1 Score: 65.5 bits (158), Expect = 2.100e-7
Identity = 27/70 (38.57%), Postives = 46/70 (65.71%), Query Frame = 3 
Query:  414 FGVLRRTTVGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHMYHQRCIHEWLGSHKSCCVCMADM 623
            FG L+   +  G D+++   P G+ CVIC EP++A+D++ +L C+H +H+ CI  W+ SH +C +C  D+
Sbjct:  233 FGQLQLRVLKEG-DEEIT--PNGDNCVICFEPYKADDIVRILTCKHFFHKDCIDPWILSHGTCPMCKCDI 299
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: H0WL85_OTOGA (RING-type domain-containing protein n=1 Tax=Otolemur garnettii TaxID=30611 RepID=H0WL85_OTOGA)

HSP 1 Score: 65.1 bits (157), Expect = 3.320e-7
Identity = 26/70 (37.14%), Postives = 45/70 (64.29%), Query Frame = 3 
Query:  414 FGVLRRTTVGGGADDDVVHVPAGEICVICMEPFQANDVLEVLLCQHMYHQRCIHEWLGSHKSCCVCMADM 623
            FG L+   +  G  D+ ++ P G+ CV+C EP++AND + +L C+H +H+ CI  W+ +H +C +C  D+
Sbjct:  234 FGQLQVRVLKEG--DEEIN-PNGDSCVVCFEPYKANDTIRILTCKHFFHKNCIDPWILAHGTCPMCKCDI 300
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: T1FW66_HELRO (RING-type domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1FW66_HELRO)

HSP 1 Score: 63.5 bits (153), Expect = 2.120e-6
Identity = 22/53 (41.51%), Postives = 36/53 (67.92%), Query Frame = 3 
Query:  477 AGEICVICMEPFQANDVLEVLLCQHMYHQRCIHEWLGSHKSCCVCMADMEEMA 635
            +GE C IC+E F   DV+ +L C+H++H++C+ EWL  H+ C +C  D+ + A
Sbjct:  277 SGESCAICVEEFVVADVVRILPCKHLFHKKCVDEWLSQHRRCPICQLDIIKAA 329
[Close]
BLAST of Ec-28_000810.1 vs. uniprot
Match: A0A7S1MR62_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MR62_ALECA)

HSP 1 Score: 58.9 bits (141), Expect = 2.540e-6
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 3 
Query:  489 CVICMEPFQANDVLEVLLCQHMYHQRCIHEWLGSHKSCCVCMADMEEMA 635
            C+IC+E F   D ++ L C H+YHQRCI +WLG+  SC VC   + + A
Sbjct:  106 CLICLEEFGEGDDVKTLPCLHLYHQRCIEQWLGTDNSCPVCKTPIGQAA 154
The following BLAST results are available for this feature:
BLAST of Ec-28_000810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5KGG6_9PHAE0.000e+077.59RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G9G1_ECTSI1.820e-263100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G9G3_ECTSI8.050e-106100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G9G2_ECTSI7.770e-60100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A852K9N4_UROIN9.930e-1049.09RN128 ligase (Fragment) n=1 Tax=Urocolius indicus ... [more]
UPI000529C18B1.960e-848.00E3 ubiquitin-protein ligase RNF128 n=1 Tax=Colius ... [more]
UPI00033387D22.100e-738.57E3 ubiquitin-protein ligase RNF133-like n=1 Tax=Ec... [more]
H0WL85_OTOGA3.320e-737.14RING-type domain-containing protein n=1 Tax=Otolem... [more]
T1FW66_HELRO2.120e-641.51RING-type domain-containing protein n=1 Tax=Helobd... [more]
A0A7S1MR62_ALECA2.540e-646.94Hypothetical protein n=1 Tax=Alexandrium catenella... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:775600..785797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score67.0
Seed ortholog evalue5.8e-08
Seed eggNOG ortholog10141.ENSCPOP00000015475
Preferred nameRNF133
Length3333
KEGG koko:K15702
Hectar predicted targeting categorymitochondrion
Gene idEc-28_000810.1
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0012505,GO:0016020,GO:0016567,GO:0019538,GO:0031984,GO:0032446,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0051865,GO:0070647,GO:0071704,GO:0098827,GO:1901564
EggNOG free text desc.E3 ubiquitin-protein ligase RNF133
EggNOG OGs3597T@314146,38BKQ@33154,3BJA2@33208,3D094@33213,3J76W@40674,48CQK@7711,48Y0Q@7742,4Q7EU@9989,KOG4628@1,KOG4628@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelRodentia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000810Ec-28_000810Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 775600..785797 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000810.1Ec-28_000810.1Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 775786..785746 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000810.1.8Ec-28_000810.1.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 775600..776066 -
Ec-28_000810.1.7Ec-28_000810.1.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 776486..777930 -
Ec-28_000810.1.6Ec-28_000810.1.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 778359..778415 -
Ec-28_000810.1.5Ec-28_000810.1.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 778880..779564 -
Ec-28_000810.1.4Ec-28_000810.1.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 780598..780710 -
Ec-28_000810.1.3Ec-28_000810.1.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 784644..784813 -
Ec-28_000810.1.2Ec-28_000810.1.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 785227..785494 -
Ec-28_000810.1.1Ec-28_000810.1.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 785670..785797 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0008103UTR:Ec-28_000810.1Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 775600..775785 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000810.1CDS:Ec-28_000810.1Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 775786..776066 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0008105UTR:Ec-28_000810.1Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 785747..785797 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000810.1 ID=Ec-28_000810.1|Name=Ec-28_000810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=1032bp
MATTFSGCWPWWPMRRARRSEREAPRGVSRKVKSRFTTVRMPAQVSSAGP
AGGGKPHSPCGGGSGGEEKSSASYAAVGAVAGLETGRDGESSGGKHPSQQ
KDDGDSQPAAAVAVKVRKGGLFGVLRRTTVGGGADDDVVHVPAGEICVIC
MEPFQANDVLEVLLCQHMYHQRCIHEWLGSHKSCCVCMADMEEMARATKK
PSRRHRRRSRARPATILERSESLRSESGYSSDQARSTLSSMSAPAALADR
LPADSGRPQASGEPPPLPLPCTLQPRIGGTSDAGPSWTWHQPRGHGRASG
VGGRPAESRAAPVGRSPTPIPRSSLLNPRWPRNPRSPAARSTVITRRRTA
AVLGFSSPPAVSTTSPGPSAAAGAAASLNTRLTPVSEWTLQSGADGSRER
KTSGTSSSSSSSSSSSSFCGNTSSIDSSDGEDQSPSDRAAQFGKFGGNRP
SGPYSHNTFLSGRSSERAGRPAVQLSPSFRPSARSSRSPQRSGLLDRYPR
GRHLSPAAVHDRAAAAAAARPRSASGSSPLLPSRTEIVRPTPRASSTPAP
RPPSEGASAAAAAAAVATSPTASPSNREQAVLQRISAPESPRSGFPSAVA
TLSTPQRMRRKSYTQPATSFSVEDTLLLASSGLTASASGTSPAPATPQRR
WEASPSTPRNWPTMTSSASNTPSSRHRRIRQWDSTQLRGVVGAGGPAAGK
RYGGEPGRSQSWGERKETEAEEERHGGGVSGFGGWSGRVPGEGAAARVYV
GAKLEQPLGVGVRRAGGGRGRASAPLTESSPSSGVVLRRSWEERKFSTKD
EDEEEEEEGKRRTSREKDEGVARPRGVASFGVGVSTEGEPPPPPPDGGSP
PSTPLSAKPPGCDWDSPVPAAGGLDGRRSRATRAEEEDRWLEDFLEKSPP
SEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHTW
SSTTSPRPHAPTIAEAKRHPPASSSPSLAVVVSTGGPKSRPEPWKPREDV
SGGDTPSLLTPGALTPGALRARSESAPMIWD*
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spliced messenger RNA

>Ec-28_000810.1 ID=Ec-28_000810.1|Name=Ec-28_000810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3333bp|location=Sequence derived from alignment at chr_28:775600..785797- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CGGCTGTCCATTGGCACAATTTAGTCACACAACACACGTACTTGTCTGGT
GATGGCTACCACCTTCAGCGGATGCTGGCCGTGGTGGCCGATGCGCCGGG
CCAGGCGCTCCGAGCGGGAGGCCCCGAGGGGAGTGAGTCGCAAGGTGAAG
AGCCGATTCACCACAGTAAGGATGCCTGCGCAGGTGTCCTCTGCTGGGCC
CGCGGGAGGAGGAAAGCCGCACTCACCCTGCGGCGGCGGCAGCGGCGGAG
AGGAAAAGAGTTCTGCCTCTTACGCGGCCGTAGGAGCAGTTGCCGGATTG
GAGACAGGCAGAGATGGGGAATCGTCTGGGGGAAAGCATCCATCGCAGCA
GAAGGACGACGGGGATTCACAGCCAGCGGCAGCCGTGGCCGTGAAGGTAA
GGAAGGGTGGCTTGTTCGGAGTGTTGCGACGCACGACGGTCGGCGGCGGG
GCGGACGACGACGTGGTCCACGTGCCTGCGGGAGAGATATGCGTGATCTG
CATGGAGCCGTTCCAGGCAAACGATGTGCTCGAGGTTCTGCTCTGCCAGC
ACATGTACCATCAAAGGTGCATCCACGAATGGCTGGGCAGCCACAAGTCG
TGCTGCGTGTGCATGGCGGACATGGAGGAGATGGCGAGGGCAACGAAGAA
ACCTTCCCGTCGGCACCGCCGTCGTTCACGGGCGCGACCAGCGACGATAT
TGGAGAGATCGGAGAGCCTGAGGTCGGAGTCCGGGTACAGCTCCGACCAG
GCCCGCTCCACGCTGTCCTCGATGTCGGCTCCAGCCGCCTTGGCGGACAG
GCTGCCGGCCGACAGCGGCCGACCGCAGGCCAGCGGCGAACCGCCACCGC
TACCGCTGCCCTGCACGCTCCAGCCCAGGATCGGTGGTACTAGTGACGCC
GGGCCTAGCTGGACTTGGCACCAGCCTCGCGGTCACGGTAGAGCTTCAGG
CGTCGGCGGGCGCCCCGCCGAGAGCAGAGCGGCGCCCGTTGGACGGTCGC
CGACGCCCATACCGAGGTCGTCGCTGCTCAACCCTCGGTGGCCGCGCAAC
CCGAGGTCGCCCGCGGCGCGGAGCACTGTTATTACCCGGCGGCGAACGGC
GGCGGTATTGGGATTTTCTAGCCCGCCCGCGGTAAGCACCACATCGCCCG
GTCCCTCTGCTGCTGCTGGTGCTGCTGCGTCGTTGAACACGAGGTTAACA
CCCGTGTCGGAATGGACGCTGCAGAGCGGTGCCGACGGCAGCCGAGAACG
CAAGACCAGCGGCACTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCTTCTGCGGGAACACGAGCAGTATCGACAGCAGCGACGGCGAGGATCAG
AGCCCCTCCGATCGAGCGGCGCAGTTCGGCAAATTTGGGGGAAACCGGCC
AAGCGGTCCGTACTCGCACAACACCTTTCTTTCTGGCAGGTCCTCGGAGA
GGGCTGGTCGGCCGGCGGTGCAGTTGTCGCCTTCGTTCCGCCCGTCCGCG
CGTTCGTCACGGTCTCCCCAACGCTCCGGACTCCTGGATCGGTATCCCCG
AGGCCGTCACTTGTCTCCGGCCGCGGTCCACGACAGAGCGGCGGCGGCGG
CGGCGGCGCGGCCTCGTAGCGCATCCGGTAGCTCCCCGCTGCTGCCCTCG
CGGACGGAAATCGTGCGCCCGACTCCACGGGCTAGTAGTACCCCTGCTCC
GCGACCTCCATCGGAGGGTGCGAGCGCGGCCGCTGCTGCCGCCGCGGTGG
CAACAAGTCCCACCGCCAGCCCGTCCAACCGGGAGCAGGCGGTGCTGCAG
AGAATTTCCGCTCCTGAGTCTCCTCGTTCGGGTTTCCCCTCGGCGGTGGC
GACGCTCTCCACCCCGCAGCGGATGCGGCGGAAGTCTTACACGCAGCCGG
CGACGTCGTTCTCCGTAGAGGACACGCTGCTGTTGGCGTCGAGCGGTCTA
ACGGCCTCAGCTAGCGGGACGTCGCCGGCGCCGGCGACCCCCCAGCGCCG
GTGGGAAGCTTCTCCGTCGACGCCCCGTAACTGGCCGACCATGACTTCTT
CCGCGAGCAATACTCCTAGCAGCCGCCACCGCCGTATCCGCCAGTGGGAC
TCCACGCAGCTGCGCGGGGTGGTGGGGGCGGGTGGGCCGGCCGCGGGGAA
AAGATACGGAGGTGAACCCGGCAGGAGTCAGTCGTGGGGGGAACGAAAGG
AGACTGAGGCGGAGGAAGAGAGACATGGCGGCGGCGTCAGCGGCTTCGGC
GGCTGGAGCGGCAGGGTGCCGGGGGAGGGTGCCGCGGCTCGAGTTTACGT
CGGAGCGAAACTGGAGCAGCCGCTGGGTGTAGGCGTGCGGAGGGCCGGGG
GGGGAAGGGGCAGGGCGAGTGCTCCCTTGACGGAGTCAAGCCCGAGCAGT
GGTGTAGTCTTGAGGAGGTCGTGGGAAGAGAGGAAGTTTTCGACGAAGGA
CGAGGATGAGGAGGAGGAGGAGGAGGGGAAACGTCGCACCAGTCGGGAGA
AAGACGAAGGCGTCGCTCGACCACGGGGCGTCGCCAGCTTTGGCGTCGGA
GTTAGTACCGAAGGAGAGCCGCCGCCGCCGCCGCCGGATGGCGGCAGCCC
GCCCTCGACGCCGCTGTCGGCGAAGCCGCCGGGGTGCGATTGGGACTCAC
CGGTCCCCGCCGCCGGTGGCCTGGACGGCCGCCGTTCGAGGGCCACGCGC
GCCGAGGAGGAGGACAGGTGGCTGGAAGACTTCTTGGAGAAGAGCCCGCC
CTCCGAGCCCGGGAGCCACAAGACGTGCTCCACCCAGTGGTCGGAGATGG
AGTCGCAGTCGCAAGGGTCCGGGAACTCGTACGCCGGGAGCACGACCAGC
AGCAGCGCGATGAGCGCACATCCCGCGGGAAGACGGTCGGTCCACACGTG
GTCATCGACGACGAGCCCGCGTCCCCACGCGCCCACAATCGCCGAGGCGA
AACGCCATCCACCCGCCTCCTCGTCGCCGTCGCTGGCGGTAGTGGTGTCT
ACGGGCGGGCCCAAGAGCCGTCCGGAACCTTGGAAACCCCGGGAGGATGT
ATCGGGGGGGGATACTCCTAGCCTACTGACCCCGGGAGCCTTGACTCCGG
GTGCCCTGCGCGCCAGGTCAGAGTCCGCCCCGATGATATGGGACTGAGTG
GGCGACAAGGAAGGCAATGGTTTTTCGTTGCGTGGGGGGGTTGCGGGGAG
GGGGCAGGTTTTGCTCCACCGTGGATGTTCTCTCGAGAAGAACCGGGAGA
GGAGGTGGAGGGCTAGAGCGGTGATATTTTTCTGAGCGTGTTTTGTTTTT
CCTCGCTCTCTCTGTCAAGGAGGAGAAGACGGG
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protein sequence of Ec-28_000810.1

>Ec-28_000810.1 ID=Ec-28_000810.1|Name=Ec-28_000810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=1032bp
MATTFSGCWPWWPMRRARRSEREAPRGVSRKVKSRFTTVRMPAQVSSAGP
AGGGKPHSPCGGGSGGEEKSSASYAAVGAVAGLETGRDGESSGGKHPSQQ
KDDGDSQPAAAVAVKVRKGGLFGVLRRTTVGGGADDDVVHVPAGEICVIC
MEPFQANDVLEVLLCQHMYHQRCIHEWLGSHKSCCVCMADMEEMARATKK
PSRRHRRRSRARPATILERSESLRSESGYSSDQARSTLSSMSAPAALADR
LPADSGRPQASGEPPPLPLPCTLQPRIGGTSDAGPSWTWHQPRGHGRASG
VGGRPAESRAAPVGRSPTPIPRSSLLNPRWPRNPRSPAARSTVITRRRTA
AVLGFSSPPAVSTTSPGPSAAAGAAASLNTRLTPVSEWTLQSGADGSRER
KTSGTSSSSSSSSSSSSFCGNTSSIDSSDGEDQSPSDRAAQFGKFGGNRP
SGPYSHNTFLSGRSSERAGRPAVQLSPSFRPSARSSRSPQRSGLLDRYPR
GRHLSPAAVHDRAAAAAAARPRSASGSSPLLPSRTEIVRPTPRASSTPAP
RPPSEGASAAAAAAAVATSPTASPSNREQAVLQRISAPESPRSGFPSAVA
TLSTPQRMRRKSYTQPATSFSVEDTLLLASSGLTASASGTSPAPATPQRR
WEASPSTPRNWPTMTSSASNTPSSRHRRIRQWDSTQLRGVVGAGGPAAGK
RYGGEPGRSQSWGERKETEAEEERHGGGVSGFGGWSGRVPGEGAAARVYV
GAKLEQPLGVGVRRAGGGRGRASAPLTESSPSSGVVLRRSWEERKFSTKD
EDEEEEEEGKRRTSREKDEGVARPRGVASFGVGVSTEGEPPPPPPDGGSP
PSTPLSAKPPGCDWDSPVPAAGGLDGRRSRATRAEEEDRWLEDFLEKSPP
SEPGSHKTCSTQWSEMESQSQGSGNSYAGSTTSSSAMSAHPAGRRSVHTW
SSTTSPRPHAPTIAEAKRHPPASSSPSLAVVVSTGGPKSRPEPWKPREDV
SGGDTPSLLTPGALTPGALRARSESAPMIWD*
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mRNA from alignment at chr_28:775600..785797-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000810.1 ID=Ec-28_000810.1|Name=Ec-28_000810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=10198bp|location=Sequence derived from alignment at chr_28:775600..785797- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CGGCTGTCCATTGGCACAATTTAGTCACACAACACACGTACTTGTCTGGT
GATGGCTACCACCTTCAGCGGATGCTGGCCGTGGTGGCCGATGCGCCGGG
CCAGGCGCTCCGAGCGGGAGGCCCCGAGGTGATCGGGAGTGTCGTCTCTT
ACAGCGGTCTTCTGAGTTGAACTCCGCTGCTGCCACGCAACTACTTTTGG
CCCAAGAGAGCAGCGCACCTGCACACGGCTGGCCGTAACTTGAACGTCTT
CCGCTCGCTGTCGTTCGCCTTTACCTCTCTCCCTCTCTTGTGTGCGTGTT
CAGGGGAGTGAGTCGCAAGGTGAAGAGCCGATTCACCACAGTAAGGATGC
CTGCGCAGGTGTCCTCTGCTGGGCCCGCGGGAGGAGGAAAGCCGCACTCA
CCCTGCGGCGGCGGCAGCGGCGGAGAGGAAAAGAGTTCTGCCTCTTACGC
GGCCGTAGGAGCAGTTGCCGGATTGGAGACAGGCAGAGATGGGGAATCGT
CTGGGGGAAAGCATCCATCGCAGCAGAAGGACGACGGGGATTCACAGCCA
GCGGCAGCCGTGGCCGTGAAGGTGTGCTTGCGGCATAGGGTTGGGCATGG
TAGTGGGTGGCGCTGCCATGAGCAGCAGACGACGTAATAAGTAGGGGCAG
AAGGAGGTAGCTGTTCTCGTTCTGAACTTACTGAACCCACGACAGGAGCC
TGTCTCCCTCATCCCCGTAAACCGTGAAAGGGCGCCGATACACACACACA
CGATGCTTCCTCGCACCCGCACGTACGCATTCATCACCGCTGCGCCCTTG
CCGGGCCCCGTGGTGGGACTTGTGCTGCGTTATACTGGACACAGAGAACG
AGAAACTGCGTGCAGCGTCTGTATACCACCAACATCTGGTTGTATCTCTC
CGTCGTTTTCGTTGACTGGGCTCTTTCATGTGTGCTGCTCCCAACCTCCT
TCCTCTGCCTGCCCTGCTCTCCATGAGAGCGTAGGTAAGGAAGGGTGGCT
TGTTCGGAGTGTTGCGACGCACGACGGTCGGCGGCGGGGCGGACGACGAC
GTGGTCCACGTGCCTGCGGGAGAGATATGCGTGATCTGCATGGAGCCGTT
CCAGGCAAACGATGTGCTCGAGGTTCTGCTCTGCCAGCACATGTACCATC
AAAGGTGAGACAAACGAAAAATTGCAGAACAGAAGTTGCGGAGGTTTGTA
ATTGGTACAAAAGAGCGGCAGCGGCCAGCAGCAGCAGCAGCAGCAGCGCT
CTCTCCCGGCATTTTTGTTCGCGTTCCCAGCAGGCAATGGTGGCGGCAGT
GGTATTGGATGGTGGCGGCAGTGGTATTGGGATTTGATGGAAGGGCTATG
AGTGAGGCCATCAACGTGAGCTCCTCGTCAGTTGTTGGCAGGAGGCGCAC
CCACAAGCAGTTTTTTTTCCCGCAACAACTCAAAACGCATCAAAATAGCA
ATTTACTCTATTTACTGCTGTTCGTACCGGCTGGTTCGTGTACAATGTGT
AAACTTCGACGGCTTTGTGGTCGAAACTGGAAGGATTTTATGTGCTCCCG
TCCATTTTCCGACTTTTTAATTCATTTCCGATCCAAATTATTTGTTCATC
AACCATCGGCGTAAATACTTTATCCAACCAGTTCTTAGGTTTCCGGGTTG
TGGGAGGTGAGGTTAAAAGGTAAAGGCCCGAGTGGCCGAGTGGGGTACAA
TTGTAGAGCATTTGTGCGTGGCGTTGTTGAAAAAAAACATAGACTGCATA
CAGATGGCGCCCGCACTTAAGAACATCTTAATTTGCGTGAGGCTGGGGTT
CTTAGTTGCCTGTTGAGGCTGCGAATGGCCATTATATAGGTTTTAGTGTG
AGGTTCTTAACGGGGACCACTAAAATACGCTCATGTTCATGAGTTTTGGA
TTTTTTGAGCCTCATGTTCTTAACAGGTAGGTTCTTAAGTGCGGGCGCCA
TCTGTACACAAACAAGCAAAATCACTGAACACATGCCGCTGGATGGCATG
GGTGAGTGTATCGTACAATGCATAATAGAACAAAATGTTTGGGTCGCATT
GCTCTCAAACAATCTATGCATATCTCACATCTACGCCGGCGGCTGGTGTG
GGGCGATGGTTCTATCTATTCAGGTGCCGTACATTAGAAATAGCCCGGGC
ATGAGACTTCTCCATAGACTACATTTCTGCTCAGGTTGGGTGCAAGTACA
TATAGTTGTATAGCTTGCAGATGTCATGTCAGGCGAACGGCGGTATTATG
GCAGATTCTCACGCTTGACGCTTGGGACAAAGCTGTGTCCTCTTTTCCGT
CTAAACATGTGTCGCGTTCAAATCTACCCGCGGCGGGCCTACGGCTGTAT
CGTATGCATATGCATACTTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCAAAGGTTGGAGATGGGGCACGAT
TTATTGCATGTCTTCGCCAGCTGCGCTGGAAACAGGGCGGTGGTGCCATG
AAAGAGGCAGAATATTCTGTGTAGTGCTGTATGCGCAGGTGGCCTCCCTT
CACTTGCTTGCCAATTTTGCACCTGTGTGTGGTATTATATTGTAGCGGCA
GGAAATCTGGACGCGAAGAAGAGTCTTTCGTTGACTGATTTTAGGTTAGA
TTTTAGGTACCAAATGGTGCCGATGCTCCGTATGCAACGCTCGCCAAATG
TTGCCTGGCATGCATGCACAGCCCTATTGTTCCATCGGGTCCACGAGCTG
GACTTCTTTTATTGTAAGACTAAATAGTGAGCCGCGGAGCGCGAAGCGCG
ACTAGCTGTTCTTTTCCCTCCGTTCGAGGAGGGAAAAGCAGGCTCTATCT
ATATATACCAGGGGCCCAAGTTTCTAAAAGCGACCGCCTGAATTTTCCCT
CCTTTCAGACCAGCACGAGGTCTAAAGAGCACCGATTAACGATCGACTGG
CTTGTGACGAAGTAAAAGAGTAGGGCGCTCTTCGCCACAGCAGATGGCCG
TGCGTCACCGGCGTTTGTACCCAAGAACCGTAGGAGATACTCAACCCCAT
CCCCGGGAGTTGTCAAGGTAATGGAGGACCAAAAGGTCGGAGATCTCCCA
CACACACGCACGCAATCACGCAGTTGGAACAGAGGAAGCACTCAGCTAAA
CACGCCACACCGCTGGGAGGGGCAAGACAGCACTGGCGGGGAAAAGGAGC
CATGCATATAGCTCCTGCCGAAACGTTTGGGAATATCATACGTATTCATA
TCCACACCAACTGGAAATGCACACACTCCTTGCCGTGGAAGGGATTGCTG
TGGTGGGCAGCAGGCAAAGGCTGGTGTTGGGCTGGGAAATAAATGTAGAT
GGCGAATCTCGGACAAACAAAGCGTATCCTCACTCGTTCGTGCAGTAGTC
TATCGCCAGACTCGCAACGAAAAAAAAAAAAACAGAAGATATATTTGTAC
TATAATAAGAAGCAATGTTTGGAGATGTTGGATGGGTCACTGAAAGAAAA
AATATAGAGTAACGTACACCGCTTCCCGAAGGCGTATTATCACCACCATC
CCAGCCATTTAATTTCGTGTCACTTGAACGAGAAGATAATACATACAAGT
GCATCCGGTACTATACTATACACTACTGATGTACACTACTTCCCCAAGAA
AATATAGGAACCCCCCTTTTACCTCACGGTATGGGTGTGTGAAAAACATC
AATACACCCCCAGTTGTTGGGTATGGACGCTTTTCATTTCGTGTAACTTG
AAGGACAACATTGTGCATACTACATCCAGCTACACTGTTTACTACAGATG
CCGGGGTTGCTATCTCGACCACAGGAGGGTTTTGATCCCTCAGTCGTCTG
TAGACAGGCCATCTCTCCGGAGCAGTGGTGGGGACCGCGAGGTAGACGAG
GGACAGGGACAGTTCTCTGGGAAGAGGCGACGGTTTCGGATGTGGGATCT
GAGGAACAGGTCATGAGTAACCGGGGAGGGGCGGGGAGGGGCGTGCACAG
ACTGACTCCTTCTTGTGCACCACGCGGCGCGGAAAAATGAGAAATGCACA
GAAAAGCGCAGGATACAGCCACGCATGCATGAGTTGAAAACACGCATGTT
CGAAGAAGCACAGCGTTTCGTGGAAATGGGGCGCTTGAAGAATGGAGCGA
AACGGGCCGAAACACAAAACGTATACGAAGTACTTGCTTAGCAGCTGTGT
AGATTTTCGTGCGGCGCTGCCTGGTACTTGTGCGAGTGTAGACATGGCTG
TCATGTTGTCGTGCGGTGCAGCAGAAGGCGCTTGTGCTATGTGTGTGTGT
CTTTTTTGTTAGCATTGACCGTGCTAACCGGCTGACAATGAAAATACGTC
AGTCTCGAGTGCGGTGCAAAATTCAAAAATGCTCTTTGGCCGCGATCTGG
GACCCTGTGACCGAGCGCCACATGGGAGAGTCCACGCCATTCGCACGATT
AAAGACAGATACCGTAGCAATAACAGAAGAATACTTGCACTCGTTTGCCA
TGGCTGCTACTACTCTGGATGCGCGTGCGTTTTGCGTTGTTTTCATCGTC
TTCCCCTGCATTTCCTACCGCCACTCTCGTTGCCAGCATTCCCACTACTT
TTTGTCGGGTCCTCTCCAGTCCCGCCTGCGGCGTTGGTTGTGAGGAAGGT
CACCTTTGCTATCTTCCATGCCATGTTTTCCCCCTCCATCATCGCCTCCA
CTCTCCTTTCTATCTTTCTCCTTTCTTTCATCATCGCCATTCTGTGTGTG
TGTGTGTGCGTGTGTGTGGACTGAGGGCACCCGTCGATACCTCAGACCGT
GCCCCCGAAAAGGGTGCGAGAGACCGCAACAAGCTTCGGTTTGCGGCAGC
GTACAGAGGGATGGGGAGCCGGATATAGTCTACACAGGAAGAAGGAGAGA
GAGAGAGAGAGAGAGACAAAAGACGACTAAATAGCTCCGTGGAAACGAAA
GAGGAGACCCAGCTGGAAGTTTGTCGTGAAGACCCTCGCTGTGCCTCTCT
CTCCAAAGGCTAAACACTGAAAAAATCGCGCTCTCCCCCTCCCCCCCCGC
CCGCGCGCGAATGACTTGACTGCAAATACACATCTAGGTGCATCCACGAA
TGGCTGGGCAGCCACAAGTCGTGCTGCGTGTGCATGGCGGACATGGAGGA
GATGGCGAGGGCAACGAAGAAACCTTCCCGTCGGCACCGCCGTCGTTCAC
GTGAGTTGCGGGCTGCGGAAGAGGCAATGGCAATAGGCAGACACCGTGCA
AGAGGCCGGAGAGATGGTACCCCCCCCCCCCCCCGTAGACCGATTATCAA
AGCGGGATTGCTTCAAGACCAAGCTTGTGCCAACACCAAAAGTGTTTTTT
AAGGTTTTGGAAACATCTCGTCGAGGGCTGGCTTTCCGTAGACTGCATCG
GGCTCCTTTCTGCGCCCGCTTGGTTGTGGAGAAAATAATCGAACTTTGAA
GGTCGGCCTGGGGGGGGTGCCACCTGGCCACCTCTTACGGTAGGTGTTAA
CGGCGTACGCATTTGTCAGCGCAAAGTATTACGTCACGGTACAAGATTCA
GTTGTTAGGTATGCCGATTCATGTTTCCTTCTAGTCAGTGCGCGTTTGGG
TTGTTGGTTTCCGGCTGCATGGTGTACATCTGTTTTTTTTTGTAGCTTGG
TACGTGGCCTGGTTCCTCGACTGGTGCCTCCGAGAAGATGGATGGGGTTG
AATTGTTGTTGTGGCAAGCCTCCGGTCACGGAAAAACGTTCACAGATCGC
GGGACTAACAAATGGTAATGTTGACTTTGGTGATACACACAGATCCGAGC
TGTCTGGAGCCTGCGTGCACCCACCAGTACGCGTGATTGGTTGGGTGTTT
TTTGTCTCGTTCGTGTGTAGTCGTCGTTGACGCTTGTGACGCGCTGCTGT
TGTTGCCACGAACGACCGCACAGACGCCAGAGACAGCACCACCAAACATG
GCTATCGGTGCAAGCACCAGACGTTCCCTCGGGCATCTAGGGAGGGGGGC
GGTTGTTGGGGTTGTATATAGTCGTCGACCCGCGTACCCCCCTTTAGGTT
ATCTTTTGTAGTCTGTTTTCGTTTATTCCGTCATGTACATCGCCTTGACC
TGATTCCCAAACAATTTTCTTTTTCGGCGCCTCCGCGTGTTGTCCCTTTT
GGCGCAACACCGGGGAACGGGTGACGCACCACACGACTTGCTGCGGACCA
AAAAACACGTGCGTGTGCCACCATCATCTCAAGGGGCGCGACCAGCGACG
ATATTGGAGAGATCGGAGAGCCTGAGGTCGGAGTCCGGGTACAGCTCCGA
CCAGGCCCGCTCCACGCTGTCCTCGATGTCGGCTCCAGCCGCCTTGGCGG
ACAGGCTGCCGGCCGACAGCGGCCGACCGCAGGCCAGCGGCGAACCGCCA
CCGCTACCGCTGCCCTGCACGCTCCAGCCCAGGATCGGTGGTACTAGTGA
CGCCGGGCCTAGCTGGACTTGGCACCAGCCTCGCGGTCACGGTAGAGCTT
CAGGCGTCGGCGGGCGCCCCGCCGAGAGCAGAGCGGCGCCCGTTGGACGG
TCGCCGACGCCCATACCGAGGTCGTCGCTGCTCAACCCTCGGTGGCCGCG
CAACCCGAGGTCGCCCGCGGCGCGGAGCACTGTTATTACCCGGCGGCGAA
CGGCGGCGGTATTGGGATTTTCTAGCCCGCCCGCGGTAAGCACCACATCG
CCCGGTCCCTCTGCTGCTGCTGGTGCTGCTGCGTCGTTGAACACGAGGTT
AACACCCGTGTCGGAATGGACGCTGCAGAGCGGTGCCGACGGCAGCCGAG
AACGCAAGACCAGCGGCACTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCTTCTGCGGGAACACGAGCAGTATCGACAGCAGCGACGGCGAGGA
TCAGAGCCCCTCCGATCGGTAAGTAAGGGATGATTCTGGGAACATGCGAG
GACGGTGCTCTAGAGGAAATTCTCCATTCACGACAGCAGTGTACATACTC
TTTGTTGGTTGTTGGTTGTTGGTTGTTGCTGTTGACATTTTTGGTGCGTA
ACTCGTCTTCCTGATGCCGACCCCATCACCTCATGATCCAAATCAGCACT
GGTACGACCAAACCGACATGTGTCGTCCCAAGTTCAGCACAGAAAGTGCA
AAATATTTTTGCGAAGTCCGGAAATTCCGGAAATCTCCCGGCGGGGTGAT
GTGGAGGGTGCCTACCCGAGGGGATGTCGACGGCTGCGTTGGATGACAAC
CAATGGGTGACAGTGTCGCCCTGGCGCACCAGTTGTGCGTATATTTTGTG
GCAGTATTTCAACATGTATTCCGCTCTCTCCCCCTGTTGTGCGCTCTTCT
TCCATTTTCGTGCTTGCGTGCGGTTGTATCAGAGCGGCGCAGTTCGGCAA
ATTTGGGGGAAACCGGCCAAGCGGTCCGTACTCGCACAAGTGAGTGGACG
TGTGCAAGAGGGGAAGGGGGAGCATTGACCTTTCGCTACGTAGTATTTAG
GTTGTTTTGTGCCTCTTCTTTTTGGAGTACCCCACCTCGTTGTGTTTCTC
TCGAACGGATCGAGGTGATGACGCTCGTAACACGCTCATCAATTTCTTAC
AATCATGTGTAAACAGCAATTTACCACGTTCCCGTACAAGCGTATGCGCG
GCGCATGTTGCGTCTACAGCAGCATTTACATCGCGCATTTGCTGTGGAAA
TTCACCTCCAGCGCTGGTTGGACGCAGACAATGGCGTAGTATCAGCCGCT
GTGCTTACTCAAACCTCCACCACCGTCCCCCGTCTCTGCTCACCCCCCGC
CCCCGCCCCCGCCCCCGCCCCCGTTCCCGATGGCATATGCCCACGCCGCC
ATCACCCGAATACATAGCACCTTTCTTTCTGGCAGGTCCTCGGAGAGGGC
TGGTCGGCCGGCGGTGCAGTTGTCGCCTTCGTTCCGCCCGTCCGCGCGTT
CGTCACGGTCTCCCCAACGCTCCGGACTCCTGGATCGGTATCCCCGAGGC
CGTCACTTGTCTCCGGCCGCGGTCCACGACAGAGCGGCGGCGGCGGCGGC
GGCGCGGCCTCGTAGCGCATCCGGTAGCTCCCCGCTGCTGCCCTCGCGGA
CGGAAATCGTGCGCCCGACTCCACGGGCTAGTAGTACCCCTGCTCCGCGA
CCTCCATCGGAGGGTGCGAGCGCGGCCGCTGCTGCCGCCGCGGTGGCAAC
AAGTCCCACCGCCAGCCCGTCCAACCGGGAGCAGGCGGTGCTGCAGAGAA
TTTCCGCTCCTGAGTCTCCTCGTTCGGGTTTCCCCTCGGCGGTGGCGACG
CTCTCCACCCCGCAGCGGATGCGGCGGAAGTCTTACACGCAGCCGGCGAC
GTCGTTCTCCGTAGAGGACACGCTGCTGTTGGCGTCGAGCGGTCTAACGG
CCTCAGCTAGCGGGACGTCGCCGGCGCCGGCGACCCCCCAGCGCCGGTGG
GAAGCTTCTCCGTCGACGCCCCGTAACTGGCCGACCATGACTTCTTCCGC
GAGCAATACTCCTAGCAGCCGCCACCGCCGTATCCGCCAGTGGGACTCCA
CGCAGCTGCGCGGGGTGGTGGGGGCGGGTGGGCCGGCCGCGGGGAAAAGA
TACGGAGGTGAACCCGGCAGGAGTCAGTCGTGGGGGGAACGAAAGGAGAC
TGAGGCGGAGGAAGAGAGACATGGCGGCGGCGTCAGCGGCTTCGGCGGCT
GGAGCGGCAGGGTGCCGGGGGAGGGTGCCGCGGCTCGAGTTTACGTCGGA
GCGAAACTGGAGCAGCCGCTGGGTGTAGGCGTGCGGAGGGCCGGGGGGGG
AAGGGGCAGGGCGAGTGCTCCCTTGACGGAGTCAAGCCCGAGCAGTGGTG
TAGTCTTGAGGAGGTCGTGGGAAGAGAGGAAGTTTTCGACGAAGGACGAG
GATGAGGAGGAGGAGGAGGAGGGGAAACGTCGCACCAGTCGGGAGAAAGA
CGAAGGCGTCGCTCGACCACGGGGCGTCGCCAGCTTTGGCGTCGGAGTTA
GTACCGAAGGAGAGCCGCCGCCGCCGCCGCCGGATGGCGGCAGCCCGCCC
TCGACGCCGCTGTCGGCGAAGCCGCCGGGGTGCGATTGGGACTCACCGGT
CCCCGCCGCCGGTGGCCTGGACGGCCGCCGTTCGAGGGCCACGCGCGCCG
AGGAGGAGGACAGGTGGCTGGAAGACTTCTTGGAGAAGAGCCCGCCCTCC
GAGCCCGGGAGCCACAAGACGTGCTCCACCCAGTGGTCGGAGATGGAGTC
GCAGTCGCAAGGGTCCGGGAACTCGTACGCCGGGAGCACGACCAGCAGCA
GCGCGATGAGCGGTGAGGCTGCCTGCCGCCTTACGCGTTTTTTTGTTTTT
GCTTCGTGCCGTCTCTCTCTGCTTCTCTTGTGTGGTCTCTTACCGATGAT
GGTATCGCTGAGAACAAAGTCATGTTGTGTGTAGGGGCTAAGAAGGCTTG
GCGACTGCCGCCTGTGAAGATCGTCAACCGGGAGTGCACAATTCACAACT
CTCATGCATGGAAAGATACATAGCAACGGTTACCCGCGGTGGGCTGAACT
AATTCCTGCGCTGTCTGTGCCGACGTCGCTTCGTCGGCAACGTATGCAAA
CCACCTGGGCCACCACGCACAAACACCATGGTGGACACACGATCGATTTC
AGTCTTTCCCCTCTTTTCGTTGTTCCAGTCACACCACTCTCTCTTATGTC
TTATTATCCTCTAACCCCCCCCCCTCCTCAGCACATCCCGCGGGAAGACG
GTCGGTCCACACGTGGTCATCGACGACGAGCCCGCGTCCCCACGCGCCCA
CAATCGCCGAGGCGAAACGCCATCCACCCGCCTCCTCGTCGCCGTCGCTG
GCGGTAGTGGTGTCTACGGGCGGGCCCAAGAGCCGTCCGGAACCTTGGAA
ACCCCGGGAGGATGTATCGGGGGGGGATACTCCTAGCCTACTGACCCCGG
GAGCCTTGACTCCGGGTGCCCTGCGCGCCAGGTCAGAGTCCGCCCCGATG
ATATGGGACTGAGTGGGCGACAAGGAAGGCAATGGTTTTTCGTTGCGTGG
GGGGGTTGCGGGGAGGGGGCAGGTTTTGCTCCACCGTGGATGTTCTCTCG
AGAAGAACCGGGAGAGGAGGTGGAGGGCTAGAGCGGTGATATTTTTCTGA
GCGTGTTTTGTTTTTCCTCGCTCTCTCTGTCAAGGAGGAGAAGACGGG
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Coding sequence (CDS) from alignment at chr_28:775600..785797-

>Ec-28_000810.1 ID=Ec-28_000810.1|Name=Ec-28_000810.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=3096bp|location=Sequence derived from alignment at chr_28:775600..785797- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCTACCACCTTCAGCGGATGCTGGCCGTGGTGGCCGATGCGCCGGGC
CAGGCGCTCCGAGCGGGAGGCCCCGAGGGGAGTGAGTCGCAAGGTGAAGA
GCCGATTCACCACAGTAAGGATGCCTGCGCAGGTGTCCTCTGCTGGGCCC
GCGGGAGGAGGAAAGCCGCACTCACCCTGCGGCGGCGGCAGCGGCGGAGA
GGAAAAGAGTTCTGCCTCTTACGCGGCCGTAGGAGCAGTTGCCGGATTGG
AGACAGGCAGAGATGGGGAATCGTCTGGGGGAAAGCATCCATCGCAGCAG
AAGGACGACGGGGATTCACAGCCAGCGGCAGCCGTGGCCGTGAAGGTAAG
GAAGGGTGGCTTGTTCGGAGTGTTGCGACGCACGACGGTCGGCGGCGGGG
CGGACGACGACGTGGTCCACGTGCCTGCGGGAGAGATATGCGTGATCTGC
ATGGAGCCGTTCCAGGCAAACGATGTGCTCGAGGTTCTGCTCTGCCAGCA
CATGTACCATCAAAGGTGCATCCACGAATGGCTGGGCAGCCACAAGTCGT
GCTGCGTGTGCATGGCGGACATGGAGGAGATGGCGAGGGCAACGAAGAAA
CCTTCCCGTCGGCACCGCCGTCGTTCACGGGCGCGACCAGCGACGATATT
GGAGAGATCGGAGAGCCTGAGGTCGGAGTCCGGGTACAGCTCCGACCAGG
CCCGCTCCACGCTGTCCTCGATGTCGGCTCCAGCCGCCTTGGCGGACAGG
CTGCCGGCCGACAGCGGCCGACCGCAGGCCAGCGGCGAACCGCCACCGCT
ACCGCTGCCCTGCACGCTCCAGCCCAGGATCGGTGGTACTAGTGACGCCG
GGCCTAGCTGGACTTGGCACCAGCCTCGCGGTCACGGTAGAGCTTCAGGC
GTCGGCGGGCGCCCCGCCGAGAGCAGAGCGGCGCCCGTTGGACGGTCGCC
GACGCCCATACCGAGGTCGTCGCTGCTCAACCCTCGGTGGCCGCGCAACC
CGAGGTCGCCCGCGGCGCGGAGCACTGTTATTACCCGGCGGCGAACGGCG
GCGGTATTGGGATTTTCTAGCCCGCCCGCGGTAAGCACCACATCGCCCGG
TCCCTCTGCTGCTGCTGGTGCTGCTGCGTCGTTGAACACGAGGTTAACAC
CCGTGTCGGAATGGACGCTGCAGAGCGGTGCCGACGGCAGCCGAGAACGC
AAGACCAGCGGCACTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CTTCTGCGGGAACACGAGCAGTATCGACAGCAGCGACGGCGAGGATCAGA
GCCCCTCCGATCGAGCGGCGCAGTTCGGCAAATTTGGGGGAAACCGGCCA
AGCGGTCCGTACTCGCACAACACCTTTCTTTCTGGCAGGTCCTCGGAGAG
GGCTGGTCGGCCGGCGGTGCAGTTGTCGCCTTCGTTCCGCCCGTCCGCGC
GTTCGTCACGGTCTCCCCAACGCTCCGGACTCCTGGATCGGTATCCCCGA
GGCCGTCACTTGTCTCCGGCCGCGGTCCACGACAGAGCGGCGGCGGCGGC
GGCGGCGCGGCCTCGTAGCGCATCCGGTAGCTCCCCGCTGCTGCCCTCGC
GGACGGAAATCGTGCGCCCGACTCCACGGGCTAGTAGTACCCCTGCTCCG
CGACCTCCATCGGAGGGTGCGAGCGCGGCCGCTGCTGCCGCCGCGGTGGC
AACAAGTCCCACCGCCAGCCCGTCCAACCGGGAGCAGGCGGTGCTGCAGA
GAATTTCCGCTCCTGAGTCTCCTCGTTCGGGTTTCCCCTCGGCGGTGGCG
ACGCTCTCCACCCCGCAGCGGATGCGGCGGAAGTCTTACACGCAGCCGGC
GACGTCGTTCTCCGTAGAGGACACGCTGCTGTTGGCGTCGAGCGGTCTAA
CGGCCTCAGCTAGCGGGACGTCGCCGGCGCCGGCGACCCCCCAGCGCCGG
TGGGAAGCTTCTCCGTCGACGCCCCGTAACTGGCCGACCATGACTTCTTC
CGCGAGCAATACTCCTAGCAGCCGCCACCGCCGTATCCGCCAGTGGGACT
CCACGCAGCTGCGCGGGGTGGTGGGGGCGGGTGGGCCGGCCGCGGGGAAA
AGATACGGAGGTGAACCCGGCAGGAGTCAGTCGTGGGGGGAACGAAAGGA
GACTGAGGCGGAGGAAGAGAGACATGGCGGCGGCGTCAGCGGCTTCGGCG
GCTGGAGCGGCAGGGTGCCGGGGGAGGGTGCCGCGGCTCGAGTTTACGTC
GGAGCGAAACTGGAGCAGCCGCTGGGTGTAGGCGTGCGGAGGGCCGGGGG
GGGAAGGGGCAGGGCGAGTGCTCCCTTGACGGAGTCAAGCCCGAGCAGTG
GTGTAGTCTTGAGGAGGTCGTGGGAAGAGAGGAAGTTTTCGACGAAGGAC
GAGGATGAGGAGGAGGAGGAGGAGGGGAAACGTCGCACCAGTCGGGAGAA
AGACGAAGGCGTCGCTCGACCACGGGGCGTCGCCAGCTTTGGCGTCGGAG
TTAGTACCGAAGGAGAGCCGCCGCCGCCGCCGCCGGATGGCGGCAGCCCG
CCCTCGACGCCGCTGTCGGCGAAGCCGCCGGGGTGCGATTGGGACTCACC
GGTCCCCGCCGCCGGTGGCCTGGACGGCCGCCGTTCGAGGGCCACGCGCG
CCGAGGAGGAGGACAGGTGGCTGGAAGACTTCTTGGAGAAGAGCCCGCCC
TCCGAGCCCGGGAGCCACAAGACGTGCTCCACCCAGTGGTCGGAGATGGA
GTCGCAGTCGCAAGGGTCCGGGAACTCGTACGCCGGGAGCACGACCAGCA
GCAGCGCGATGAGCGCACATCCCGCGGGAAGACGGTCGGTCCACACGTGG
TCATCGACGACGAGCCCGCGTCCCCACGCGCCCACAATCGCCGAGGCGAA
ACGCCATCCACCCGCCTCCTCGTCGCCGTCGCTGGCGGTAGTGGTGTCTA
CGGGCGGGCCCAAGAGCCGTCCGGAACCTTGGAAACCCCGGGAGGATGTA
TCGGGGGGGGATACTCCTAGCCTACTGACCCCGGGAGCCTTGACTCCGGG
TGCCCTGCGCGCCAGGTCAGAGTCCGCCCCGATGATATGGGACTGA
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Synonyms
The feature 'Ec-28_000810.1' has the following synonyms
Synonym
Esi0098_0048
Esi_0098_0048