Ec-28_000760.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEc-28_000760.2
Unique NameEc-28_000760.2
TypemRNA
OrganismEctocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length148
Homology
BLAST of Ec-28_000760.2 vs. uniprot
Match: D7G9F7_ECTSI (DA1-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F7_ECTSI)

HSP 1 Score: 479 bits (1233), Expect = 6.620e-150
Identity = 264/358 (73.74%), Postives = 271/358 (75.70%), Query Frame = 3
Query:  639 VERGRHVW-------GSLVPRQPRAPSSGRGRTVEDEALARRLQEQWLLENAADRGGGGFGGH--GQAAGSVAYRGNALPR-RVCAFARAARCR*PTL--CFARVPWGRVSTWAACREESRPFPPASVP*KAACPRRAGPLLPPQ----------LLPRSVLSWHHDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKVLNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLPSQ 1646
            V +GR  W       GSLVPRQPRAPSSGRGRTVEDEALARRLQEQWLLENAADRGGGGFGG   G   G ++ +  + P  R+C     A C  P     F +   G             P P   V     C  R    LP Q                  WHHDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKVLNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLPSQ
Sbjct:  109 VRKGRGAWSGGAMFGGSLVPRQPRAPSSGRGRTVEDEALARRLQEQWLLENAADRGGGGFGGQWPGGGIGRISGKRPSAPGVRIC-----AGCSMPITDAVFRQGAMGESFHMGCMPGGESPLPACKV-----CHER----LPAQDGRVHFYRHNFFHEVYCPWHHDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKVLNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLPSQ 452          
BLAST of Ec-28_000760.2 vs. uniprot
Match: A0A6H5KFR7_9PHAE (DA1-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFR7_9PHAE)

HSP 1 Score: 441 bits (1134), Expect = 4.200e-135
Identity = 252/369 (68.29%), Postives = 261/369 (70.73%), Query Frame = 3
Query:  639 VERGRHVW-------GSLVPRQPRAPSSGRGRTVEDEALARRLQEQWLLENAADRGGGGF--------------GGHGQAAGSVAYRGNALPRRVCAFARAARCR*PTL--CFARVPWGRVSTWAACREESRPFPPASVP*KAACPRRAGPLLPPQ----------LLPRSVLSWHHDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKVLNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLPSQ 1646
            V +GR  W       GSLVPRQPRAPSSGRGR  EDEALARRLQ+QWL ENAA  GGGGF              GG G  +G      +AL  R+C     A C  P     F +   G             P P   V     C  R    LP Q                  WH+DSSPRC SCMRLEPMP P GKGGEG FAELSDGR+LCMACAQTAVVDSSEGAPAFQEVCTFFEKVLNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLP+Q
Sbjct:  169 VRKGRGAWSGGAMFGGSLVPRQPRAPSSGRGRAAEDEALARRLQDQWLSENAAGPGGGGFXXXXXXXXXXQWPGGGIGHFSGKGP---SALGVRIC-----AGCSMPITDAVFRQGAMGESFHMGCMPGGESPLPACKV-----CHER----LPAQDGRIHFYRHNFFHEVYCPWHNDSSPRCYSCMRLEPMPQPTGKGGEGAFAELSDGRVLCMACAQTAVVDSSEGAPAFQEVCTFFEKVLNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLPAQ 520          
BLAST of Ec-28_000760.2 vs. uniprot
Match: A0A421GL81_9STRA (LIM zinc-binding domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GL81_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.060e-23
Identity = 75/198 (37.88%), Postives = 106/198 (53.54%), Query Frame = 3
Query: 1068 HDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKV-LNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPT----TRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLPSQ 1646
            HD+  RCCSC R+EP      +G +  F  LSDGR +C  C +  V+DS E    F+EV  +   + ++LP        PV +V+SP LNE  +   K G       P     TRGL LSEV+ + HM         + G+  V   + +   + R+V AIL+L GLPY   ++ILAHEATHA++KL  +F   +PS+
Sbjct:   95 HDNRDRCCSCQRVEPTI----RGLD--FHSLSDGRKICHDCCKYLVLDSKEAQGIFKEVWEYMRSIGIHLP------EIPVYLVESPVLNEHCNAQNKTGTLMNGNKPVKGHVTRGLCLSEVSQIRHMV--------RHGKHAVPQVASIE--KNRSVNAILILHGLPYDLTASILAHEATHAFIKLSDNFPEHIPSK 270          
BLAST of Ec-28_000760.2 vs. uniprot
Match: A0A1V9ZDY1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDY1_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.210e-23
Identity = 77/192 (40.10%), Postives = 99/192 (51.56%), Query Frame = 3
Query: 1068 HDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKV-LNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLP 1640
            HD   RCCSC R EP            F  LSDGR +C  C++T ++D++E  P    V +F   + ++LP        PVL+VD  TLN  TH    +     KG P   G+ LSEV  V H+A               G + ++ L +RR V AIL+L GLPY   + ILAHEATHAYLKL P F + LP
Sbjct:  132 HDQRDRCCSCKRPEPT------ASNRRFESLSDGRKVCSGCSETVILDTAEVQPVVAHVWSFLASLGMHLP------DLPVLLVDFETLNAHTHDHHANLPREAKG-PAVYGVCLSEVRYVRHIARR-------------GAQERMQLSDRR-VNAILILHGLPYDMTAYILAHEATHAYLKLRPEFPAHLP 296          
BLAST of Ec-28_000760.2 vs. uniprot
Match: A0A225WYN2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYN2_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.780e-22
Identity = 75/196 (38.27%), Postives = 107/196 (54.59%), Query Frame = 3
Query: 1068 HDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKV-LNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPT----TRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLP 1640
            H++  RCCSC R+EP    PG+     F  LSDGR +C  C    V+DS+E     +EV  + + + +NLP        PV +V+SP LNE  + ++K         P     TRGL LSEV+ V HM         + G+  V PR   ++ + R+V AIL+L GLPY   +++LAHEATHA++KL  +F   +P
Sbjct:  243 HENRDRCCSCQRVEPTV--PGRE----FHSLSDGRKICHDCCNYLVLDSNEAQGVVKEVWAYMQDIGINLP------EIPVYLVESPVLNEHCNANKKSKTLMNGNKPVKGHVTRGLCLSEVSQVQHMV--------RNGKHAV-PRV-ASIEKTRSVNAILILHGLPYDLTASVLAHEATHAFIKLSDNFPDHIP 416          
BLAST of Ec-28_000760.2 vs. uniprot
Match: A0A1W0A961_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A961_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.890e-22
Identity = 74/192 (38.54%), Postives = 104/192 (54.17%), Query Frame = 3
Query: 1068 HDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKV-LNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPTTRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLP 1640
            H    RCCSC R+EP            F  LSDGR LC+ C++T ++D++E  P   EV  F   + +++P        PVL+VD  TLN  TH    +    +  +PT  G+ LSEV  + H+A        K+G+     + +++L +RR V AIL+L GLPY   + ILAHEATHAYL+L+  F   LP
Sbjct:  134 HSQRDRCCSCKRIEPT------AIHRQFDSLSDGRKLCLGCSETVILDTTEVQPVVAEVWAFLASLGMHVP------KLPVLLVDFETLNAHTHSHHSN-LPRDARVPTVYGVCLSEVRYIRHIA--------KRGQ-----QERMSLSDRR-VNAILLLHGLPYEMTAYILAHEATHAYLRLNSRFPPHLP 298          
BLAST of Ec-28_000760.2 vs. uniprot
Match: A0A2D4BVU9_PYTIN (LIM zinc-binding domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BVU9_PYTIN)

HSP 1 Score: 111 bits (277), Expect = 3.260e-22
Identity = 74/188 (39.36%), Postives = 99/188 (52.66%), Query Frame = 3
Query: 1068 HDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKV-LNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKH-GAGSEKGMPTTRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSF 1625
            HD   RCCSC R+EP            F +LSDGR  C  C  T ++D+ E  P  ++V  F E + ++LPV       PV +V+  TLNE  H    H G G+      TRGL LSEV  + H+         ++GR  V    +VN    R+V AIL+L GLPY   + +LAHEATHAY+KL+  +
Sbjct:  123 HDDRARCCSCQRMEP------SDPRRRFEQLSDGRKTCHDCCLTVILDTDEVQPVVRDVWQFLESLGIHLPVV------PVYLVEYSTLNEHLHSTHSHDGDGASSQGFVTRGLCLSEVTELRHLV--------RRGRHHV---PEVN----RSVNAILLLHGLPYELTAQVLAHEATHAYIKLNDGY 283          
BLAST of Ec-28_000760.2 vs. uniprot
Match: G4ZD02_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZD02_PHYSP)

HSP 1 Score: 112 bits (279), Expect = 8.910e-22
Identity = 73/196 (37.24%), Postives = 104/196 (53.06%), Query Frame = 3
Query: 1068 HDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKV-LNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPT----TRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLP 1640
            H++  RCCSC R+EP    PG+     F  LSD R +C  C +  V+DS+E     +EV ++   + +NLP        PV +V+SP LNEQ +  +K         P     TRGL LSEV+ + HM     H           PR   ++ + R+V AIL+L GLPY   +++LAHEATHA++KL  +F   +P
Sbjct:  261 HENRDRCCSCQRVEPTI--PGRQ----FHSLSDNRKICHDCCKYLVLDSNEAQSVVKEVWSYMRDIGINLP------EIPVYLVESPVLNEQCNAHKKTDTLMNGNKPVKGHVTRGLCLSEVSQIRHMVRTGKH---------AAPRV-ASIQKTRSVNAILILHGLPYDLTASVLAHEATHAFIKLSNNFPDHIP 434          
BLAST of Ec-28_000760.2 vs. uniprot
Match: A0A2P4Y8G5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y8G5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.050e-21
Identity = 74/196 (37.76%), Postives = 106/196 (54.08%), Query Frame = 3
Query: 1068 HDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKV-LNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPT----TRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLP 1640
            H++  RCCSC R+EP    PG+        LSDGR +C  C    V+DS+E     +EV T+   + +NLP        PV +V+SP LNEQ +  +K         P     TRGL LSEV+ + HM         + G+  V PR   ++ + R+V AIL+L GLP+   +++LAHEATHA++KL  +F   +P
Sbjct:  248 HENRDRCCSCQRVEPTI--PGRE----LHSLSDGRKICHECCNYLVLDSNEAQGVVKEVWTYMRDIGINLP------EIPVYLVESPVLNEQCNAHKKKKTLMNGNKPVKGHVTRGLCLSEVSQIQHMV--------RNGKHAV-PRV-ASIEKTRSVNAILILHGLPHDLTASVLAHEATHAFIKLSDNFPDHIP 421          
BLAST of Ec-28_000760.2 vs. uniprot
Match: D0NSJ6_PHYIT (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=D0NSJ6_PHYIT)

HSP 1 Score: 111 bits (277), Expect = 1.540e-21
Identity = 73/196 (37.24%), Postives = 103/196 (52.55%), Query Frame = 3
Query: 1068 HDSSPRCCSCMRLEPMPHPPGKGGEGPFAELSDGRMLCMACAQTAVVDSSEGAPAFQEVCTFFEKV-LNLPVSNEMRGSPVLVVDSPTLNEQTHLDQKHGAGSEKGMPT----TRGLTLSEVATVMHMAPGAMHFDAKQGRFVVGPRSQVNLGERRAVTAILVLCGLPYASFSAILAHEATHAYLKLDPSFSSRLP 1640
            H    RCCSC R+EP+   PG+     F +LSDGR +C  C    V+DS E     +EV  +   + ++LP        PV +V+SP LNEQ    +K     +   P     TRGL +SEV+ + HM     H           PR   ++ ++R+V AIL+L GLPY   +++LAHEATHAY+KL  +F   +P
Sbjct:  258 HQHRDRCCSCQRVEPII--PGRE----FHKLSDGRKICHDCCNYLVLDSHEAQGVVKEVWAYMRDIGIHLP------EIPVYLVESPVLNEQCCAHKKSRTLIKGNKPVEGHVTRGLCISEVSQIQHMVRTGKH---------TAPRV-ASIEKKRSVNAILILHGLPYDLTASVLAHEATHAYIKLSDNFPEHIP 431          
The following BLAST results are available for this feature:
BLAST of Ec-28_000760.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9F7_ECTSI6.620e-15073.74DA1-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KFR7_9PHAE4.200e-13568.29DA1-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A421GL81_9STRA1.060e-2337.88LIM zinc-binding domain-containing protein n=4 Tax... [more]
A0A1V9ZDY1_9STRA1.210e-2340.10Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A225WYN2_9STRA1.780e-2238.27Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
A0A1W0A961_9STRA1.890e-2238.54Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A2D4BVU9_PYTIN3.260e-2239.36LIM zinc-binding domain-containing protein n=1 Tax... [more]
G4ZD02_PHYSP8.910e-2237.24Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A2P4Y8G5_9STRA1.050e-2137.76Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
D0NSJ6_PHYIT1.540e-2137.24Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr_28contigchr_28:730101..744837 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR2016-10-08
Properties
Property NameValue
Length4676
Hectar predicted targeting categorymitochondrion
Gene idEc-28_000760.2
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ec-28_000760Ec-28_000760Ectocarpus species7 Ec32 male_plus_femaleSDRgenechr_28 730101..744837 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000760.2.12Ec-28_000760.2.12Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 730101..733124 -
Ec-28_000760.2.11Ec-28_000760.2.11Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 733765..733911 -
Ec-28_000760.2.10Ec-28_000760.2.10Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 734674..734757 -
Ec-28_000760.2.9Ec-28_000760.2.9Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 735942..736040 -
Ec-28_000760.2.8Ec-28_000760.2.8Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 736682..736801 -
Ec-28_000760.2.7Ec-28_000760.2.7Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 738042..738162 -
Ec-28_000760.2.6Ec-28_000760.2.6Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 738377..738471 -
Ec-28_000760.2.5Ec-28_000760.2.5Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 738858..739034 -
Ec-28_000760.2.4Ec-28_000760.2.4Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 739685..739830 -
Ec-28_000760.2.3Ec-28_000760.2.3Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 740192..740599 -
Ec-28_000760.2.2Ec-28_000760.2.2Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 743642..743729 -
Ec-28_000760.2.1Ec-28_000760.2.1Ectocarpus species7 Ec32 male_plus_femaleSDRexonchr_28 744671..744837 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0007603UTR:Ec-28_000760.2Ectocarpus species7 Ec32 male_plus_femaleSDRthree_prime_UTRchr_28 730101..733124 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000760.2CDS:Ec-28_000760.2Ectocarpus species7 Ec32 male_plus_femaleSDRCDSchr_28 733907..733911 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_0007605UTR:Ec-28_000760.2Ectocarpus species7 Ec32 male_plus_femaleSDRfive_prime_UTRchr_28 738392..738471 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ec-28_000760.2Ec-28_000760.2Ectocarpus species7 Ec32 male_plus_femaleSDRpolypeptidechr_28 733907..738391 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ec-28_000760.2 ID=Ec-28_000760.2|Name=Ec-28_000760.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=148bp
MASRQLATVLQLHAAGAHATSTRKRRGGTVRRAVGRPNAVHGVRTDGGGG
LLRGGPGVSGGVHVLREGAELAGVQRDAGISGPGCGLPHSERTDASGPEA
RRRFREGHAYHERANSVRGGNGDAHGPRGDAFRRQARPLRRRPSQPG*
back to top

spliced messenger RNA

>Ec-28_000760.2 ID=Ec-28_000760.2|Name=Ec-28_000760.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=4676bp|location=Sequence derived from alignment at chr_28:730101..744837- (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
TTCCGCACACCGCACACAGGGCAGTCGGTCAGTCAGCCACACAAGCCCGT
CTTCATCAGCTGGACGCGCCGTACTTGAAGATGGGAACAATGAAGGTTTT
CTTGGAGAACATCCGCAGCATGGCGCGGAGCCCTACGCAATACAACCGGA
CTCAGCAGGAGAGAATAGCCTCTCAGGAAGCTGAGTTTGAAGCTGCGGTT
GCCGCCTCCCTCGTCGAAGCTGGTGGTTCTGGCTTTCCGGTGCTGCCTGC
ATCAGGCGGCGCCGGCGCCGGCAGTGCGCAAGGCGACGAGGCCGCCGCCA
TCGCCGCCGCCATCGGAGCCTCGCTCGACATGCACGAGGCCGCTGCTGCT
GGCTCTCAGGGCAACGGCGCCAGCAGCAGCAGCAGCAGCAGCAGCGGCGG
CGGCGGCGGCGGTCGCGGCGGTCGCGGCAAGAAGGGCGGCGCCCACCCCG
ACCCAGCGCCGTTCGCGGGAGGCTTCGACGGCACCCACGGCTCCCAAGAC
TTGGCATTTCTGAGCGACCTCCCGTTGCTCCCACCCGCCCCCGCTCCCGC
CCAGACAGGCAGGGGTGGTGGCGGTGGCGGTGCTGCTGCTGCTGCTGATG
CTGCTGGTGGTGGGGAGGGCGTACGGAAAGGCCGGGGCGCGTGGAGCGGG
GGCGCCATGTTTGGGGGATCGTTGGTGCCGCGCCAGCCACGGGCCCCCTC
CTCCGGTAGAGGGCGAACGGTCGAGGACGAAGCGCTGGCCAGGCGCCTGC
AGGAGCAGTGGCTCTTAGAGAATGCTGCGGACCGCGGCGGCGGCGGTTTC
GGGGGGCAGTGGCCAGGCGGCGGGATCGGTCGCATATCGGGGAAACGCCC
TTCCGCGCCGGGTGTGCGCATTTGCGCGGGCTGCTCGATGCCGATAACCG
ACGCTGTGTTTCGCCAGGGTGCCATGGGGGAGAGTTTCCACATGGGCTGC
ATGCCGGGAGGAGAGTCGCCCCTTCCCGCCTGCAAGGTGTGCCATGAAAG
GCTGCCTGCCCAAGACGGGCGGGTCCACTTCTACCGCCACAACTTCTTCC
ACGAAGTGTACTGTCCATGGCATCACGACAGCTCGCCACGGTGCTGCAGC
TGCATGCGGCTGGAGCCCATGCCACATCCACCAGGAAAAGGCGGGGAGGG
ACCGTTCGCAGAGCTGTCGGACGGCCGAATGCTGTGCATGGCGTGCGCAC
AGACGGCGGTGGTGGACTCCTCCGAGGGGGCCCCGGCGTTTCAGGAGGTG
TGCACGTTCTTCGAGAAGGTGCTGAACTTGCCGGTGTCCAACGAGATGCG
GGGATCTCCGGTCCTGGTTGTGGACTCCCCCACTCTGAACGAACAGACGC
ATCTGGACCAGAAGCACGGCGCCGGTTCAGAGAAGGGCATGCCTACCACG
AGAGGGCTAACTCTGTCAGAGGTGGCAACGGTGATGCACATGGCCCCCGG
GGCGATGCATTTCGACGCCAAGCAAGGCCGCTTCGTCGTCGGCCCTCGCA
GCCAGGTTAATCTGGGCGAGCGAAGGGCCGTGACGGCCATCCTGGTGCTG
TGCGGCCTCCCGTACGCGTCCTTCAGCGCTATCCTGGCCCACGAGGCCAC
GCACGCCTACCTCAAGCTCGACCCCTCCTTCTCGTCTCGACTACCGTCGC
AGGTAGAAGAAGGCATCTGCCAGTTGGTCTCCCTGCTGTGGCTCGAGCAC
CTCGGGGGCAGGGGCACCGGCGACGAGGAGGTGCGGCAGCGCAGGCGACG
GGGTCCCCGCCACGGAGCCCCCCCCTCCAATGAGGAGCTCCGCCAGTACT
TCGTCCACCAAATCAAGACCGACACTTCGGTCGTGTACGGCGACGGTTTC
AGGAAGGCGAAGGCGGTGTACGACGCCGTTGGCTTGGAGTCCCTGCTGGA
CCACGTGAAACGCTACGATAGCTTCCCGGCGATTTGACCTTCCTTTTCTT
TTTTCATCTTGCTTCCTCGTGATGGCACCAACATCTTGTCACCTTCTAGC
AGTACCCATACAAGGCTGGTTTTGATTTGGTTCATGACTGTGCTTTTGGT
CAGAAGGGCGTGCAGTTTTTCGTTTTCCGTGTGCGTCGGAAAGTGTGTGT
GCCCCCCCCCCCCACCGCGCGCGCGTTTTGTGTGTGTAACCGCGTGAGAG
TACTAACGCGCAGCTGGACTCTGCCTTGTTGTACCTTACGCATGTTCTAC
CTGTAGTTGTTTTGGTCACCCTGTTGCCTGGGTGACCTGGATAGAGTGCA
CACGATTGTAGCTGTTTTTATGTTGTTTTTTTATGACCCCTTGTTGCATA
CCTGTAATTGTTTTTGCCACCCTGTTGCTTGGGTGACCTGGATAGAGTGC
ACACGAAACACTCCCCGATGATTAAATGGAACTCGCGGAACCGGCCCAAA
ATAACCGCTACTGGTCTGCGTGCAACTCATCTCGACACGGTTTTTCACCA
TCAGTATTTTGGGGGAGGGCGCGGGACGAGCGGGTGCTACATTATCATCA
TTGTTGACGGTGACAGAAGATGGTGTGCCCCCTGGAAAAAACGTTGAGGC
GTGCATGTGAGAGACATGGACGGAATTCATCAGAGGACAGATTTAGTTCG
AGCGTGGATACGGAGCGGCGGATAAAGTCTTGAGCGTAGAGAGACGGTTG
ACAAGGGTGAAATACGGTCTCGCCAGCCGCCTCCCCGGGTATGGACGCTG
ATGAGCCAAGCTGCTCGTATGTTAGTAGTAGCTCGCTTGAGATGAGCTGA
GGAGTGGAGGACGGAAGAGTGGGTTGTTCTTGTTGGTGCAGAGCAGTGGA
TTTTGTGGTTTTTTCTTGCGGCTTTTTTTGTCTTTGTTGTGGGTGCTTGT
CTCTTTTTTTTTGTTCTGGGCGCCGGGTCTACGCCCCTCGGTGTTTGGTT
TTCGCACACAACATGGCATCATGGTCGCACAGGAACAAGACCGGAAAATT
TGCCTTCTTTTCCCCGACGTTCGAACAAGGCGAGAACCAATACGCGCGGG
TTGGAGGCTTAGTCTACAGCTTGGGGGAGACACAGTATGTATGTTGTGCG
AGTGCATGTAATGAGAGCCGATCAGTTGCTGAGCGTGCCGCAACCCCGAA
AGAAAAAGGTGTTCTTAGCCACACAACAGCAGTGGAAGCTCTGCCGTTGG
TCTGGTGTGCCGACCAGGAAGTGGCAAGTGCCTTTGTGGTTGTAGTCGGC
GATTCCTGTGACGGCGTGGGTGACGGTAAATCTAGACTGTTGTGATTACA
TGTGAAATGGGGCCCTCCCTCTATTGACGTGTTCATGTCTGCGTGTCTTT
ATTTTTAGCATCGGCCGCGCGCCAACCGGCTGACGAATGAAAATACGTCA
GTCTCAGCGCGGCTGAAAACAGAGAGCGATTCTAAGCGCTATAAGTACGT
GCGGCTCGTTGTTGTGCTCTTGGTGGCGCGGTACGCATGCATGCATGCAT
ATGGATTTCTTGGCCGCCGCTCGTTGAACCACCACGCCTCAAACCATGCC
TCTGTTGCTCGAGGCCCGACAATTTCGTGTTTTTGCTACTGTTTGGATGT
ATGTGTATCTTTCTGTTTTCACGTTTCCCACGCCTTGGTTGTTCGTGATT
TCGCACGGAGATTGTTATCTGTCTTGTCTGCAGCAGTGGGCCGAGTACGC
ACCCTCACGATTTTTCATTCCCTTGTTTTTTTCGTGCCTTGTTTCGTTGT
ACCTTAAAGGCTGTCTCTGTGTAGGGAGTAGTAGATGGTGCATGGTGTAT
GCATTTTTTCGGCATTGGGTCCGAGAATGTCTTAGGTTGAGCCGCGGGTG
TCAACCGCGAGCTCCCCCCCCCGTGTTGGCCATCATTTTGTCCTTCCTTG
ACTAGTGTTTTGACTATATGCACCGTGGAGGGAGACGTGAGCATGTGTCT
CAGCCATTGTTTCTGACTTCCCCTGGCAGGCGTGTTCGCCGTGGGTTAGG
GGTGTGTGTTTGGGCGGCTCTCGCAGCTCTGCGTAAAGAGTGAAAAGAAG
CGCCAGATTGTGCCCCAGGTGTCACTTGACATCAGGGTTTGTTTTCTGTA
CTACTGTAGCTTGAAGTGGTATTTGTTTGTTCGGACAATGGTGATTATTA
TCGTGTGTAATTTATTGCTCCTCTGCTGTATTGCGTTTTTGATTGCTCGA
TGGCGCAGAAAGAGAGAAAGATTAAGATTGATGACAATATTTCACCCGGT
TTCATATACCATGCATGCATGGTGTTCTGAGAAAAATACCTTCGAAATGC
CATACACGTCACAGCAGTACAAGACGAACTGCAAGGGAAATCATCGCTTT
CACCGATCGATGCTGCCGGATAAAAAGATGGAGAGAAGGAACGTGGAATG
AAATTGATGCTACAGTATTGTAGTACGTGTGTACAGTAGGGTGAGAACCT
GACGTTTCTGCTTGATGACCTTCTATTTACATGCGATCCAAGGAGCAAGA
CTATGGTTGATGCGTGTACGGGGGGCTTTTGAGTCCACAGTAAAATGACG
GTCGCCTCTGGCCGAGTCACATTTTGACTACGTGTACACTCCCTCACCCC
CTCAAAGAGCGACGGCCACAACAACAGCGAAAGCGGTGGCGCCCCCCCCA
ACGAAAACGGACGTACGTGTGTATGCCGCACTGATCTGCTGCTGCTGTTG
TTCCTTTCCGGAACAAGGCTTAAGGC
back to top

protein sequence of Ec-28_000760.2

>Ec-28_000760.2 ID=Ec-28_000760.2|Name=Ec-28_000760.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=148bp
MASRQLATVLQLHAAGAHATSTRKRRGGTVRRAVGRPNAVHGVRTDGGGG
LLRGGPGVSGGVHVLREGAELAGVQRDAGISGPGCGLPHSERTDASGPEA
RRRFREGHAYHERANSVRGGNGDAHGPRGDAFRRQARPLRRRPSQPG*
back to top

mRNA from alignment at chr_28:730101..744837-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ec-28_000760.2 ID=Ec-28_000760.2|Name=Ec-28_000760.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=14737bp|location=Sequence derived from alignment at chr_28:730101..744837- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
TTCCGCACACCGCACACAGGGCAGTCGGTCAGTCAGCCACACAAGCCCGT CTTCATCAGCTGGACGCGCCGTACTTGAAGATGGGAACAATGAAGGTTTT CTTGGAGAACATCCGCAGCATGGCGCGGAGCCCTACGCAATACAACCGGA CTCAGCAGGAGAGAATAGTAAGAGATGTTATTTATGCAACGTGATTTTGG AACAAGCAGCGGAGTTCGTAGCAAACAACGCACTTGCTGCTGCACCGCTT CAACCGCCAGAGAGCTTACTCCCGTTGTGAATCTTGAGGCTTTCCCGGAG CTCTGAAGCTCTTCGTTCGTCGTGAGAGTTCACTAAGTCGTGAACCGTTG GTACCGGCTTCACGCCCCGCCGTATGTGCCCCTTGCTGCCTTGCTGTGAT GTGTGTCCTTTCGAACCCCGAACACCCAGCATTCCGTATCCAGAGGTGGA GCGGTGTTTCATTGACACCATACTTGTTGTCTTAGTACTGCTGTGGTAGA TATTTCGTGTAACAACATGCGAACTTTCAACGATAGAATTACCCCAGACC ACCAGTGCTTGTTCCTCTCTCACCACACGCGCCCGGGGCTGCCGTAGCCC TGCAACCATGCACCGGCCTTGTTGTATTTCGGACCCGATGATTTCATCCT AGATCGACTCTGGCCCCTTAGTCTGTCGATACATACCCCGTAAAGTATCC CGAAAAATTGTTCGCTTTTTTTGATCTTTTTCTTTCATGTCAGTCACTTC GGAATCAAGCTCTCCTATAGATTTACCAGTGATTTGCTCGTAGTCTAGTC TACGATCACGTCCTTGCCTGCTAAACCTAAAAACCAATGAATGAAAATTC AAACACCCCCATAATATGTACACTCAAGTTTGAAAGCATAGGAACTTGAA ACAGGACAACACAGCAGTAGTCATGCAGCCACTGCAACAGAAAAGGTCGA AGGGTCGAAGGGCCTGTTGGCCTGGACTGTTGAAGAGCCGCCTGAGCGCG GGGTTTCTTTTTTCTCGTCATTATCGTACGCTTCCAACTTCTATTTCTCC GAACCAATCTCGGTGCTACTGCATGCATGTGCTTCCCGACGCTGTGTGCT GCGCTCAGGCCTCTCAGGAAGCTGAGTTTGAAGCTGCGGTTGCCGCCTCC CTCGTCGAAGCTGGTGGTTCTGGCTTTCCGGTGCTGCCTGCATCAGGTAA GATCTAGATTGTTCTGTGAGAGCAACGGCGGTATTTTCGAGCATCGGATC AGGTTGATTTGTGGCTTGTATGCTGCATCTAAACATAGAGTGGAGAGAGA GAGAGATAGAGAGAGATTCGGAGGGCCTGGACAGAAGAGTGCAAATATGT TACGGCACTACTCCGAAAGTCATCGCCATCGCCACTACCGCCACCACCAC CGACAATGTTGTAACCACAACAGCTTTTGTTTTATTTAGTCCTACAACTG TGCCTAATGTCAAGTGCGGCATAATATCTGCTGTACAACAACGTTGCGAG CAGTTGCTCATGTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG TTGTTTTTCTTCACATTAAACTCGTGTCAGTTGCTAATCCCAAAATCTAG CAAAGACTCGGCCCGTGGTCACAAAAATGCTAAAGCCATCAGAAGATCTA AAGAACACGCACACTATTAGCATGAAAAGGGTACACAAGCCCGAGGAGGT ACACCTACATGTGTTGGCAAATGGCGAATGGGACAGAAAGAACACGGGCA CTTTGTTTGATCGTGCTGTATGTAGGCTGTAGATTGATGTGTTGGAAGCG AAATGTGAGAGTTGAGAACCGCACCCAAAAACATGTGGGAGGCAGTATTC CCGTAAGCGGCGAAGAGATCGCACCGTCTCTACTAGACCGACTTCCAATT CCCAACTGCTTCTTCTCAACCAAGTGGGTGCGAAGTGCTATGTATGATAA GAGCCCGATAATTCCAGCCAGCAAATTTCACGGTATGTTGCTAGTCCTCG ATAATTCTACCGAAAGCCTTCGACGAGATGCCCCCAAAACCAACATTTTT GGTGGTGGCACAAGCTTGGTTTTGGAACAGTCGAGCTTTCACAATCGTGC ATGCCGTAGTCGTTTGACCATTGACCTCGCATCCCTACAAAGCCGGGACG GAGCACGCCGGGTTCTCACCGGACCAGGCTCTCACATCACCAAGCGCGAA GCGCCGTGAGGTATTTGGCGAGTCGCATGAAGGGTGCGCTGCCATCCTGC TAAGGGTGTTCGGCATCTTGTGCTTACTTCCTTGCGTACGGATGACAGCT GCGTATGACTTAATTTATTTTCTGGTGCTTTCACTTCCAGAGACAGCAGT TATGAGCACTGTGTAACTGCCTCGAGGAAGCTTGACCATTTTAACACAAC GTGGTGCGATCATCCCCCGTTGCGCGGAGTGAGGTTTCTCGACCCCGCAC AACATGATCTACTCGACCACCATTATGGTTACCGCCAAAAAAAAAACCAG AGGTAAAAAAAAAAGACGGTAACCTGGTTGCCGAGTTCACGAAGTGAATT GGCTTGTTTTACAACGTCGTTGCCAATCGACGAAAACCCAATCCCGATGG CAAACACCGAGTGGGGGGCTTGTTTTACAACGTCGTTGCCAAGTGACGAA AACCCAAACCCCGATGGCAAACACCGGGAGGGGGGGGGGGGGGAGCATCT CTTCGCCTTTTACGGTTACCCAACGACTGACTGAGACAGGGAAGAGGGAA TGTTGTTCCTGCGGAGGAACGGACGCGGAAAAACATTAGTATACGAATCG GAAGATAAATAAAAAAAATTACTATACACGACGCGGTTGACGCACAACCA CACAACCCTTACACTTCTCATGTTTTGTACAATGTCTTCCCAAAAACAAA CGATACTCACCATGAAAAAATATCAAACCACACACACATCTTGAAAAAAC TGGCCTGGTACTTCTACCTTTTACCTCTATTCACACCCGTGCCGGTCCAA CAGACGCTGATTGCCTTTCGTGGCCGCAGGCAAACCACGCCCGAAAGGGT TTATACACACTTTTCGGATGTACCACAACACACTTTTCCGCAACACACAA AAAAGAGGTCGTGTGTATTTTCTAAACACAAAAGACATGGCAGTCGGACG TCGTCCGCCATACGTGGAATAAAGGAATGAAGGGCCCATCGCTCCCGCTC TGCACACACACACGCGATTCCAAACAAGATAAAACGAACAAAAGAGAACA CAAGCCGGTCTTTTCGAGCAAGTGGGGCGGAACCTCCTGACCTCTTGGCT CTAGCCAAGCACGGGCGTACGCTTTTTTTTTTTTCTCAATATGATTCCAT CTCTATCCCAGAAAAGAGTCCACGGTAGGTTAGCAATGAACTCACAGCGG CAGCGGAGACTACCTGTATTTATACGGTGTCTCGCGCAGCACACGGCGAT ATCCCCCCTGTGGGGAACAGTCTCAACAAGACAGTAGTCATGTTAACACA TTCAGAGGGAGGAACGGAATAAGGTGGAAAGCTGCTCCGACAGCGGATAG CTTGCCACGAGTGTGCTAAGGCAAGTACATAGATAGGTTGACGCATGGAC TATTGTGTAGCGTTTAAAAGCGGGTTTTGATGGTCGCAGATTTCAACCCC GGGTAAGGGAGTCGATGTATTCTAGATACGCAGACCTTTCACTAGGAAGA ATAAGTATAAACACATAAAGACTATCGTACCCGTTCGAGATATAACCATA GTCGAACGGGGTGTGTTGGAGTTTTCAGCGAGTGGAGGGACACCGGCTAG ACCTTTGATTTTTTGAAATACGCATGGTGACAGCGGGATTGTCGGAGAGT CAGTCGGTATCGCCCGTGAAACACCTCGCCGATCTCGCTCTCCCCCCCCC CCCCCCCCGCCCGGTCTTCGTGCAAAACGTTTCCGCACGTACGTACAGTA TGTGTGTCGAAGCTGGAAGCTTTCTGATTTGTTCGTTGCTTGCTCTTGCT GAGCTCTTCCGTTGTGTATCCCGATATGTCTGTTGTTCATGCTGTACGTA TGTAGTGCGCTCACGAAAGCTGCTCCGAGAGCTGACTGCCATGTGCCGCG TCCGTTGCCGTGTTTCTTGACTAAAGCTAACGCTGCTACTGCCTCTGCTG CGCTCTTGCTTCGTGCTGTGGCCTATGTGCTCGCTGCCGTCAATATTATC CTGCGTTCCCGGTTCTCCTTTGATTGGTCCGGGTGCAGGCGGCGCCGGCG CCGGCAGTGCGCAAGGCGACGAGGCCGCCGCCATCGCCGCCGCCATCGGA GCCTCGCTCGACATGCACGAGGCCGCTGCTGCTGGCTCTCAGGGCAACGG CGCCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCGGCGGCGGCGGTCGCG GCGGTCGCGGCAAGAAGGGCGGCGCCCACCCCGACCCAGCGCCGTTCGCG GGAGGCTTCGACGGCACCCACGGCTCCCAAGACTTGGCATTTCTGAGCGA CCTCCCGTTGCTCCCACCCGCCCCCGCTCCCGCCCAGACAGGCAGGGGTG GTGGCGGTGGCGGTGCTGCTGCTGCTGCTGATGCTGCTGGTGGTGGGGAG GGCGTACGGAAAGGCCGGGGCGCGTGGAGCGGGGGCGCCATGTTTGGTGA GTGCATGGCGTTCATCTGTCTGTGCGCAGCTTGTTTCATCATTTGCTGTT GCGGTTTTGTGCCGTTGCGAGTTTCTTCCCCTTAGACCCGGTATGGCCTC TACCCACTGTCTCCACAAACGGCGGCAACTGTGGCAGCGGCGGCAGCAGT AGGGGCCACAACAGCAAAGGACTCCTGGCTCGTGCCTCGCCCCTCGCATT TCCACCTCTCTTTTCTCTTGCCAACTCACAAACGTGACTTGTCGACGACA CTAGTAATGGTACCAATTGTCCGTTTTATTTGTCTGTCTTGTCCTTATCA AGACTCTCTAATCCGATACGTAAGCATACACAAACATGCGCAACCCTTCG TCGGCAGGGGGATCGTTGGTGCCGCGCCAGCCACGGGCCCCCTCCTCCGG TAGAGGGCGAACGGTCGAGGACGAAGCGCTGGCCAGGCGCCTGCAGGAGC AGTGGCTCTTAGAGAATGCTGCGGACCGCGGCGGCGGCGGTTTCGGGGGG CAGGTAAGAAGAAGACCCGAAAAATTATTTTTTTCCCTCAAAGCTACATT GCGCTGCTGTTAATAGTTGTGTCGCTCACGATCTCTTCCCACCCAGCGGC GGTGTGTTGTAGGTAGGAACTGGCGGTAACGGGAACGCAAACGGGAGCTG TCCTGTCCTGTTCTGTGCAGGTGGTGCCCGAGTCTCGATGTTGGCGCGAA TGGAGGGTCTGCGGGGGGACCCTTCGTGGGCAGGCTAGTGGAGAGTAGTA GTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGCAAAGAGAGAG CGAGCGATGCTTGCTTCTCACGTGGGCGGGTTCAACTGGGAAGACGGCGC GCGCAGTTGGTGCCCTTTCATGGCCCCCTCCCTGTCTTCTTGTCTTCCCC ACCACCTCTTGGATTTCCAACGTCAATTGTGATAGGCATACGCTCTTTGC GATTGTTTGTTATCAATCTCGAGACGTGTCTCACATGCTAATTCTTGGCA TGCGATGCGAATGCTCTTCTTTCTGTCCTCGAGTTTGGTATGCCGCGGGG TGTGTGTGTCTGAAATGGCCCTTTTATCTTGACCCTTCTACAAGACATTT ATTCTTGCCCGCTAAATCCCCCCCCTCCCTACCCCCGGGAATGCTATCGA CAGTGGCCAGGCGGCGGGATCGGTCGCATATCGGGGAAACGCCCTTCCGC GCCGGGTGTGCGCATTTGCGCGGGCTGCTCGATGCCGATAACCGACGCTG TGTTTCGCCAGGGTGCCATGGGGGAGAGTTTCCACATGGGCTGCATGCCG GGAGGAGAGTCGCCCCTTCCCGCCTGCAAGGTGGGCTGCTGTTGTTATAC CAGTGGTGTCCGTAGTAGTAGCAGTAATAGTAATAGTAGTACTATAAGTA GAAGCCGTCGTTGGTGGCGATGTTGTCGCCGACTTTTCCTTTGTGGAGAA CATCATTTTCAACCTAAGGCACTCCATTAACCCCGCGGCACTTCGGAGGT TAGCTTGTTACTCCGAGTCCAAATGTACATGATCTTGGTACAAGCAGTAA CGGGTTCGGTGTCGCTGTTGCTGTTGTTGTCGTTGTTGTTGCTGCTGCTA CTGTTGTTATTGTTGTTGTCCTAGTCGTCGTCGTGGTTGTTCTTGCTGTC GGATATGTTGTTTTTGCCGTTATGCCCTTGAGAAAACCGGTACCCTTGCT CCCTAAACATGATCAGGTGTGCCATGAAAGGCTGCCTGCCCAAGACGGGC GGGTCCACTTCTACCGCCACAACTTCTTCCACGAAGTGTACTGTCCATGG CATCACGACAGGTGCTGATGTTGTTTCCTGCTGCAGCTGCTGCTGCTGCC GCTGCTGTTGAAATCCTCCGCCGGTCCCCCCACCCTCACATCTCGTGGCC CACGCGCCACGTTGATGATTGGACAAGCAAGTATGTGAAGCTTTTCATGA CGAATCGACACGGTCCTCATCTGCGGTTGTTGTTGTTGTTGTTGTCCTTC GCGCACCTCCCCCCCGCTGTCACAGCTCGCCACGGTGCTGCAGCTGCATG CGGCTGGAGCCCATGCCACATCCACCAGGAAAAGGCGGGGAGGGACCGTT CGCAGAGCTGTCGGACGGCCGAATGCTGTGCATGGCGTGCGCACAGGTAC ATATTGCATGCTTCCGACGGGGGGGCGTAGTCATGTAAAACGCATGCCGT AGTCGTTAGACCGTTGACCTCGCGTTCCTACAATGCCGGGACGGAGAGAT GTGCAGGGTTTTCGCCGGCCCAGGCTACGTGGCACAGGGGTGGACCAGAA GTTGGCCATCGACCTTGCTTGGGGGACGACGTTAGAGGTCACCCTAGCGA AAACCGCGCCCATGTCGTTCTGTTTGGAACGCTCCCTCCCTCGGCAGCGC ACGTGGGTGTATCATATTTAAGAGCTACTTCCCGTCATTTGGAAAACGAT GTCATCCAAGCGATCAAACCCGCGACATCTCCAAATCAATCCTGGCAAGG ATGCATTCACTACTGTACAATGCGAAGAGACTAAACTAAAGGTGCGATAA TTACGTTGGCCGGAAAAATGAAGACCTAGTTTTGGGGCGGGGGATACACG TAGGCTTTATTGACCATTTCTTCGAGACATGTACCCTACCCTCTCCCGGT TCCGCCGACAACCCGTTAGACATACAAACATGCTCTGTTTCGCCTGTCTG TGCAGGCATGCGAGGCATTCTCAAGGCTACATGCCTCTGTCTTGGCTTTG CAGTGCATGCGAGACAGTCCTAGTCAAGGCCATGGACGGAAAATCATGTA CATTGGTGACGACCCCCCCTCCCCCCCCCCTAAACCGGTCCGTCTCGAAA GGGACGCGTGGTCAATGGTCAAATGACTACGGCAAGCAACAAATGAGTAC GCCCCCCCCCCCCCCCCCCCCGGGGGGGGGTAAACCCTTTGGTGGTGGGT TTTTTTAAAAGGGGGGGGGGGCCCCCCCCAAGGGGGCCCGGGGGTTTTAG GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NAAAAAAATTTTTTTTTTTTCCCTTTTGGGGGGGCTTGGGGGGCCTTTTT AAAGGCCCCACCCTTTTTTTTGGGTTTCCCAGGCCATGGGAAAATTTCTT TTTAAGGCCCAGGGGGGAAAAAATATTACCTTGGGGGGGGCCCCCCCCCC CCCCCCCCCAAAACCGTTCCTTTTTAAAAGGGGGGGGGGGCCAAGGGTAA AAAAATTCCGCCAACCAAAAAAAAGAACCACCCCCCCCCCCCCCCCCCCG GGTTTGTGTATACCCTTGCGGTGATGTGTTTTTCAGACGGCGGTGGTGGA CTCCTCCGAGGGGGCCCCGGCGTTTCAGGAGGTGTGCACGTTCTTCGAGA AGGTGCTGAACTTGCCGGTGTCCAACGAGATGCGGGGATCTCCGGTCCTG GTTGTGGTGAGTTGTTGCCTTTGGAAACTGTCGTGTCGCCGGCGTCGTGT TCGTTGTGGAATGGTCGGTGTTAAATGTTGTTGATGATGAAATGAAAAAG TGAAAATATGCAGCGCTCTCTCGCTTTCCCTTTGTTGTACCACGGTGTGC CCCAACGACTGCACCTTTTTCTTTTGTTGTGTCAAGGGGAGGAAAGGCCA AGGTTCCTTACCCCTTCCGCCTGCACTGATGAGCAGCACCGCGGGTGAGG CGTGGGGGTGGTAACCGGGCAGAGCTGTTTAACACGTACCACATGTTGAG CGTAGCGTACAACAACGCACCAAAACCGTAACAACAACGCACCAAAACCG TAACAACAAGAACGGCGACAACGCCAACGGCAGCAGCGGCTGCTGCTGCA GCAGAAGTAGCAGCAGCAACAGCAGAAACAACGGTAAGGGACCACGTCTT GAAACTTAACCCGGTTTTCCTCCCCCTACTCTCGACCTCCTGCTCTTGCG CTCCCTCTCCCTCCCTCCCTCCCTCCCTCTCTCCCCTTTCTCTCCCCCCC TCTTTCTGTCTGTCTGTCTGTCTCTGTCTCTCTCTCCCTCTCTCTCTCTC TGTCTCTCTCTCTGTCTGTCTATCTTGGTCTCTTCTCTTTCTCGCAGGAC TCCCCCACTCTGAACGAACAGACGCATCTGGACCAGAAGCACGGCGCCGG TTCAGAGAAGGGCATGCCTACCACGAGAGGGCTAACTCTGTCAGAGGTGC TTTTGAATCCGAAATCCTAACCGTCGGTGTCTCTCTTGTTTACCTAGCTT CGCCATCGTGCTTTGTACGAGTCTGGTTGTTATCGTTGTTGATGATGACA TTTACTTAAGCTCATGTTGTTGTGCATGACCATGTTGATGGTGTTGATTC TGTTGTGTTGTTTCATGTCCCAACGGTGAGAAAGAAAACAAATTTCCGAC TGAAGTTGTTGTTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTAGTTG TTGTCGTCGTTATTTCGTCGCTTTATCGCGTTGCTGTTTCGGACTCAGAT ATGGCACATGATTCGTCCAACAACCCCCATTTTTCTTCCCGACACCCGCG CGGCCCAGGCGCCGAAACGGAGGCACGCTCTCACGTGTAGTAGATCTTTG GCACTTTTATCCGCGCGATATAGATCATACATCCCCGTGGGCAACGGAGA CGAGAGGGTATCGCTACCACAGGCGTGGTTTTGTTTTGCGACCGCGCACA CGATGCTTACGAAGGGCATGAGGTGCCTTGCGCGGTGAAGGGCAGGGGGT GTCCTTGTCACCTGCCGGTGCAAGGTCCCTCACAGGAGCCGTCCGCGATT TTCGCCCATCGTTGCGCCGTGTGTTTGTTTTTCGGAAAAAATTCGCCTGA AACCTTCCTCATATCCTTCATCTGTTGCTGTCGGTCAAGCACCTTGCGCA TGAGGAGGCGTAGGCGTCGGCGATTGGTTTACTGGGGAGAACGCAGGAAC TACAAGTAGTAACAAGTAGTGCAACATACATTAGATCTGGACTGCGTTCG ACGAAGGTCATCTTCGCCGGTGCTCTTCGCTATAAGGGGGAAAGCGAAAG CACGTTCCTGGCTCGCTCTCCGGCGATCGGTCTGAAGTTCAAATGCTCGC CATCTCATGCGGAATACCAAAACGCGACAGACACGTGTCGTGTTTCCAGC CGATGTATGTGTGTGTGTGTATGTGTTCATTATTAGTATCGACCCCGCTA CTCGGCTGACCGATGAAATGGCGTCAGTCTCGGTGCGGTTGAAAACGGAA AACACTTCTAGTTGCCGTTAACTGGGACCCCGTGAGGGGGCGGCATGGGG TGTGTGTGCGTATGTGTGTGTATTTTTTTACATACTGTACCCTGGCCTCC CACCTCTGGCTTGAATTCCTTTTCATCCAGGTGGCAACGGTGATGCACAT GGCCCCCGGGGCGATGCATTTCGACGCCAAGCAAGGCCGCTTCGTCGTCG GCCCTCGCAGCCAGGTGAGCCAACGCATCGCACCGATTTGCTGCGCGATC TTTGCCCCCCATCGCCGCCCACCACTAAAGTGTACCGCTGGAGAATCGAC AGCCATTCGTATCCGGTTTTGGGCGGAGAGATAAAATACCCCAAACCACT TCTGCAACTTTTTCCTGCTGTGCTCCCGAGTAAAAATGACACAGCAGTGC ACTCCGAAATTACAACTTTCTTTTCAATGGTTGCTGCGTGCACCTTTTCT CTCTTCATTTCAATCGTTGACGTTACTGGTGTCTTGGCGGTGCTGCTCAA ACCGCCCCACGCATCTCCATCTGCCAACACCGACTGTGCACTACCCTCCC ACAATCGCAGGCAAGCTGTACGGAATGACTCAGCTTTCGTATGGGGACGA AAGGCCGGCCCTGACCACCGAAGAAAAGTTATTCCCACACCAGAATACAT CTATCCGCGGTTGCAGATGACGTTTAACACCGAAACGTGTACCCCCTTTT CACGTTGGCGCGACCGACGTTTCGTCTCATACCGCCTCGCGGCGAGCAGC GACCGACCAAGACAGGCTGGAACCGAACCATCTCACAGACACGCACACAC ACGCGCATTTCTGCCGCCACCTAACTCGTCCGTCGCCCGTGCGGTGTCTT CCAAGCCGCACTCGGCGCACGGAATGAATGCATGCATGCATGCTACAGGT TAATACCGTATCATTCATTAATTCAGTCATTCATACATTGATACATTCAT GCCATTCATTCGTTTCTTTTAAATAGGTTAATCTGGGCGAGCGAAGGGCC GTGACGGCCATCCTGGTGCTGTGCGGCCTCCCGTACGCGTCCTTCAGCGC TATCCTGGCCCACGAGGCCACGCACGCCTACCTCAAGCTCGACCCCTCCT TCTCGTCTCGACTACCGTCGCAGGTGGGGGTGCATGGAACTGTTTTGTGT TTGTTGTTCGTGCTTAGGAGGGTGACGCACACGCGCATATATATTTTTTC GCCTCTTGGGACAGATAGATACCGATTAGCCCTCTTTTTTAGGACCGCCT CTCGTTTTTGTGGGGAGGCGTTTTTTGTATGTCCTCCCTTGTGGCGGGCG GGCTGCTGGTCAAGCGCTTGGTGTTACGGGAGGCGCTTGTTTGTCGTCCG TACACGGCAAAGCCGGCTGCTGTTGTTGTCCATATATATTTTTAAGGAAT GTTCTGACTTCTCTTCGGCTACATGCCCAGTACCTTCGTTTCATGGGCGG TGCTGAGCGTTTCACCCCCTAGCGAACACATGTGGGGTACGGGTACAACA CGTTGTTAGTGTGCTTCCTCCAATCGCCCACGCTCCCTGAAACCATAGAC ACGCACTCCCTAATGATGCCTTTTCCGGCCACTTTTTGCGGCTCCCCTGA CATGCGTCACAGCACAGACAGCCCCCCTATTCGCATGCGCAAGAACATTT TTTCGGGCACGACACAGAACCAACCACAACCCGTTACTCTCATCATCAGC GAAAGGCACCGAACAAGCTGCTCGAGCACTAGGCATTAACAACGCTGCCA CGAACGGTCGCAGGTAGAAGAAGGCATCTGCCAGTTGGTCTCCCTGCTGT GGCTCGAGCACCTCGGGGGCAGGGGCACCGGCGACGAGGAGGTGCGGCAG CGCAGGCGACGGGGTCCCCGCCACGGAGCCCCCCCCTCCAATGAGGAGCT CCGCCAGTACTTCGTCCACCAAATCAAGACCGACACTTCGGTCGTGTACG GCGACGGTTTCAGGAAGGCGAAGGCGGTGTACGACGCCGTTGGCTTGGAG TCCCTGCTGGACCACGTGAAACGCTACGATAGCTTCCCGGCGATTTGACC TTCCTTTTCTTTTTTCATCTTGCTTCCTCGTGATGGCACCAACATCTTGT CACCTTCTAGCAGTACCCATACAAGGCTGGTTTTGATTTGGTTCATGACT GTGCTTTTGGTCAGAAGGGCGTGCAGTTTTTCGTTTTCCGTGTGCGTCGG AAAGTGTGTGTGCCCCCCCCCCCCACCGCGCGCGCGTTTTGTGTGTGTAA CCGCGTGAGAGTACTAACGCGCAGCTGGACTCTGCCTTGTTGTACCTTAC GCATGTTCTACCTGTAGTTGTTTTGGTCACCCTGTTGCCTGGGTGACCTG GATAGAGTGCACACGATTGTAGCTGTTTTTATGTTGTTTTTTTATGACCC CTTGTTGCATACCTGTAATTGTTTTTGCCACCCTGTTGCTTGGGTGACCT GGATAGAGTGCACACGAAACACTCCCCGATGATTAAATGGAACTCGCGGA ACCGGCCCAAAATAACCGCTACTGGTCTGCGTGCAACTCATCTCGACACG GTTTTTCACCATCAGTATTTTGGGGGAGGGCGCGGGACGAGCGGGTGCTA CATTATCATCATTGTTGACGGTGACAGAAGATGGTGTGCCCCCTGGAAAA AACGTTGAGGCGTGCATGTGAGAGACATGGACGGAATTCATCAGAGGACA GATTTAGTTCGAGCGTGGATACGGAGCGGCGGATAAAGTCTTGAGCGTAG AGAGACGGTTGACAAGGGTGAAATACGGTCTCGCCAGCCGCCTCCCCGGG TATGGACGCTGATGAGCCAAGCTGCTCGTATGTTAGTAGTAGCTCGCTTG AGATGAGCTGAGGAGTGGAGGACGGAAGAGTGGGTTGTTCTTGTTGGTGC AGAGCAGTGGATTTTGTGGTTTTTTCTTGCGGCTTTTTTTGTCTTTGTTG TGGGTGCTTGTCTCTTTTTTTTTGTTCTGGGCGCCGGGTCTACGCCCCTC GGTGTTTGGTTTTCGCACACAACATGGCATCATGGTCGCACAGGAACAAG ACCGGAAAATTTGCCTTCTTTTCCCCGACGTTCGAACAAGGCGAGAACCA ATACGCGCGGGTTGGAGGCTTAGTCTACAGCTTGGGGGAGACACAGTATG TATGTTGTGCGAGTGCATGTAATGAGAGCCGATCAGTTGCTGAGCGTGCC GCAACCCCGAAAGAAAAAGGTGTTCTTAGCCACACAACAGCAGTGGAAGC TCTGCCGTTGGTCTGGTGTGCCGACCAGGAAGTGGCAAGTGCCTTTGTGG TTGTAGTCGGCGATTCCTGTGACGGCGTGGGTGACGGTAAATCTAGACTG TTGTGATTACATGTGAAATGGGGCCCTCCCTCTATTGACGTGTTCATGTC TGCGTGTCTTTATTTTTAGCATCGGCCGCGCGCCAACCGGCTGACGAATG AAAATACGTCAGTCTCAGCGCGGCTGAAAACAGAGAGCGATTCTAAGCGC TATAAGTACGTGCGGCTCGTTGTTGTGCTCTTGGTGGCGCGGTACGCATG CATGCATGCATATGGATTTCTTGGCCGCCGCTCGTTGAACCACCACGCCT CAAACCATGCCTCTGTTGCTCGAGGCCCGACAATTTCGTGTTTTTGCTAC TGTTTGGATGTATGTGTATCTTTCTGTTTTCACGTTTCCCACGCCTTGGT TGTTCGTGATTTCGCACGGAGATTGTTATCTGTCTTGTCTGCAGCAGTGG GCCGAGTACGCACCCTCACGATTTTTCATTCCCTTGTTTTTTTCGTGCCT TGTTTCGTTGTACCTTAAAGGCTGTCTCTGTGTAGGGAGTAGTAGATGGT GCATGGTGTATGCATTTTTTCGGCATTGGGTCCGAGAATGTCTTAGGTTG AGCCGCGGGTGTCAACCGCGAGCTCCCCCCCCCGTGTTGGCCATCATTTT GTCCTTCCTTGACTAGTGTTTTGACTATATGCACCGTGGAGGGAGACGTG AGCATGTGTCTCAGCCATTGTTTCTGACTTCCCCTGGCAGGCGTGTTCGC CGTGGGTTAGGGGTGTGTGTTTGGGCGGCTCTCGCAGCTCTGCGTAAAGA GTGAAAAGAAGCGCCAGATTGTGCCCCAGGTGTCACTTGACATCAGGGTT TGTTTTCTGTACTACTGTAGCTTGAAGTGGTATTTGTTTGTTCGGACAAT GGTGATTATTATCGTGTGTAATTTATTGCTCCTCTGCTGTATTGCGTTTT TGATTGCTCGATGGCGCAGAAAGAGAGAAAGATTAAGATTGATGACAATA TTTCACCCGGTTTCATATACCATGCATGCATGGTGTTCTGAGAAAAATAC CTTCGAAATGCCATACACGTCACAGCAGTACAAGACGAACTGCAAGGGAA ATCATCGCTTTCACCGATCGATGCTGCCGGATAAAAAGATGGAGAGAAGG AACGTGGAATGAAATTGATGCTACAGTATTGTAGTACGTGTGTACAGTAG GGTGAGAACCTGACGTTTCTGCTTGATGACCTTCTATTTACATGCGATCC AAGGAGCAAGACTATGGTTGATGCGTGTACGGGGGGCTTTTGAGTCCACA GTAAAATGACGGTCGCCTCTGGCCGAGTCACATTTTGACTACGTGTACAC TCCCTCACCCCCTCAAAGAGCGACGGCCACAACAACAGCGAAAGCGGTGG CGCCCCCCCCAACGAAAACGGACGTACGTGTGTATGCCGCACTGATCTGC TGCTGCTGTTGTTCCTTTCCGGAACAAGGCTTAAGGC
back to top

Coding sequence (CDS) from alignment at chr_28:730101..744837-

>Ec-28_000760.2 ID=Ec-28_000760.2|Name=Ec-28_000760.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=444bp|location=Sequence derived from alignment at chr_28:730101..744837- (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGCATCACGACAGCTCGCCACGGTGCTGCAGCTGCATGCGGCTGGAGC
CCATGCCACATCCACCAGGAAAAGGCGGGGAGGGACCGTTCGCAGAGCTG
TCGGACGGCCGAATGCTGTGCATGGCGTGCGCACAGACGGCGGTGGTGGA
CTCCTCCGAGGGGGCCCCGGCGTTTCAGGAGGTGTGCACGTTCTTCGAGA
AGGTGCTGAACTTGCCGGTGTCCAACGAGATGCGGGGATCTCCGGTCCTG
GTTGTGGACTCCCCCACTCTGAACGAACAGACGCATCTGGACCAGAAGCA
CGGCGCCGGTTCAGAGAAGGGCATGCCTACCACGAGAGGGCTAACTCTGT
CAGAGGTGGCAACGGTGATGCACATGGCCCCCGGGGCGATGCATTTCGAC
GCCAAGCAAGGCCGCTTCGTCGTCGGCCCTCGCAGCCAGGTTAA
back to top
Synonyms
The feature 'Ec-28_000760.2' has the following synonyms
Synonym
Esi0098_0039
Esi_0098_0039