Ec-28_000530.1 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-28_000530.1
Unique Name	Ec-28_000530.1
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	666

Homology

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BLAST of Ec-28_000530.1 vs. uniprot
Match: A0A6H5K6L1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L1_9PHAE)

HSP 1 Score: 1065 bits (2754), Expect = 0.000e+0
Identity = 593/621 (95.49%), Postives = 602/621 (96.94%), Query Frame = 3

Query:   63 MGRAGVALAGWTILLCFSSVAAQNESCTTETCGVSTCEAGRELEVSLEGTSLEISCNLCLENFYKAEESADPCLACGDGLVSEVGAVVCTLEAGFWRTSNTSDIVYECPNADACVGGATVETYCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQFFKEKCGGAFGIDISKKQRPDGQGPSSGRVGEQYQQHLXXXXXXXXXXXXXHAPLSASPEARTARAGRP 1925
            MGRA VALAGWTILLCFSSVAAQNESCTTETCGVSTCE G ELEVSLEGTSLEISCNLCLENFYKAEE ADPCLACGDGLVSEVGAVVC+LEAGFWRTSNTSDIVYECPNADACVGGAT ETYCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVM VGTNSKVFKF+KQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLK+LVFTTLLPLGIVAVLMAQYAKTVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISC SNKYTFIY YAIIMAIIFPAGIP+TYLAVLYLGKERINPDPV+PEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFE+GTSTQVVIAMLITLAGLRVLAGL+PYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQ FK+ CGGAFGIDISKKQRP GQG +SGRVGEQYQQHL  XXXXXXXXX  HAPLSASPEART RA RP
Sbjct:    1 MGRADVALAGWTILLCFSSVAAQNESCTTETCGVSTCEPGSELEVSLEGTSLEISCNLCLENFYKAEEGADPCLACGDGLVSEVGAVVCSLEAGFWRTSNTSDIVYECPNADACVGGATAETYCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMAVGTNSKVFKFVKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKRLVFTTLLPLGIVAVLMAQYAKTVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCNSNKYTFIYAYAIIMAIIFPAGIPVTYLAVLYLGKERINPDPVNPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEEGTSTQVVIAMLITLAGLRVLAGLQPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQLFKDTCGGAFGIDISKKQRPSGQGHNSGRVGEQYQQHLRQXXXXXXXXX--HAPLSASPEARTVRADRP 619

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BLAST of Ec-28_000530.1 vs. uniprot
Match: D7G9D7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9D7_ECTSI)

HSP 1 Score: 890 bits (2300), Expect = 0.000e+0
Identity = 471/471 (100.00%), Postives = 471/471 (100.00%), Query Frame = 3

Query:  645 ANDAAASNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQFFKEKCGGAFGIDISKKQRPDGQGPSSGRVGEQYQQHLXXXXXXXXXXXXXHAPLSASPEARTARAGRPDVRPFEQSPRHRSPVPMNNPIRGGGRVPQQSGKANNYRSAGSVA 2057
            ANDAAASNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQFFKEKCGGAFGIDISKKQRPDGQGPSSGRVGEQYQQHLXXXXXXXXXXXXXHAPLSASPEARTARAGRPDVRPFEQSPRHRSPVPMNNPIRGGGRVPQQSGKANNYRSAGSVA
Sbjct:   36 ANDAAASNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQFFKEKCGGAFGIDISKKQRPDGQGPSSGRVGEQYQQHLXXXXXXXXXXXXXHAPLSASPEARTARAGRPDVRPFEQSPRHRSPVPMNNPIRGGGRVPQQSGKANNYRSAGSVA 506

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BLAST of Ec-28_000530.1 vs. uniprot
Match: A0A836CJ54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ54_9STRA)

HSP 1 Score: 291 bits (745), Expect = 2.180e-83
Identity = 178/510 (34.90%), Postives = 258/510 (50.59%), Query Frame = 3

Query:  261 EESADPCLACGDGLVS-EVGAVVCTL--EAGFWRTSNTSDIVYECPNADACVGGATVETYCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQY-AKTVRTRSTEAS-------RRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFD------DGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTTSQFFKEKCG 1739
            E+S+  C AC DG      G  + TL  EAG+WR   T DI  ECP  D+C                                    CS G  A                                         +     +    ++   ++KQ   TL+VRFKILVTHFQIV   P +L V +P++F    + ++V +LDFWGLLS  C+F+ +FL +L+F+TLLPL I+A +   + A+ V  R   +        R  ++D +    LLT F FY+V ST +++ FDC          + +SYL+AD+ + C S  Y    VYAIIM  ++P G+P  Y ++L L ++R++P     + S++ R++DA ++KT+FLWG+YRP  ++YEVW  + KL L+GLLVYF QGT TQ  +A+L+TL  + +   + P+ R DEN LAE + W T LTL A LLI A     DG +   LG ILSI+N  +  LA  Q+ W+ S +  +  G
Sbjct:   46 EDSSGQCAACPDGATCITAGQTIDTLSLEAGYWRGGPTLDI-QECPRMDSC----------------------------------RSCSRGGRAYTIIVIVVFCAALAAVLLLLYKGLARDVQAGDATLSVTQSDSFGGAHSASAVARAVAWLKQRSATLMVRFKILVTHFQIVAGLPALLRVNFPQSFTALTNTLNVFNLDFWGLLSSGCFFEVNFLNKLLFSTLLPLAIIAAIFGVHGARCVLARGRGSGSGGSALWRHGSWDASLQAALLTLFMFYVVASTTVLQTFDCDTVQLSSATGETASYLRADYSVDCDSAAYRRSRVYAIIMTAVYPIGVPFLYASLLLLSRQRLDPVRADAKRSMEVRDADAGVRKTRFLWGSYRPRAFWYEVWLTLYKLLLSGLLVYFRQGTPTQTTVALLLTLVAMWLQTLVAPFTRRDENRLAECAYWATILTLIAALLISASDTGSDGVNMALLGAILSIINLLVIVLAVVQLFWSASAWLYDLIG 520

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BLAST of Ec-28_000530.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 1.570e-52
Identity = 139/466 (29.83%), Postives = 224/466 (48.07%), Query Frame = 3

Query:  333 LEAGFWRTSNTSDIVYECPNADACVGGATVET-YCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMTVGTNSK----VFKFIKQWKDTLVVR-FKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAK-TVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADE-DGYDTVALGVILSIMNAALFALAAFQILW 1706
            ++ G+WR + T+  V  C NADAC+GG T E  YC +G+ GP CA+C  +Y  + ++EC +CS G   +                                         A+ V  + +N +        I   KD +  R  KI+V  +QI+T F  V +V +P  + R+ D + V++ D   ++S  C    DF   L+  T+ P+ +V VL A YA  + R R ++ +    F      VLL  F  Y   S+ +   F C    D +SYL+AD+ I C S K+  + ++A+ M +++P GIPL Y  +LY  +E +             R++    K    LW  Y P  YY EV EC R++ LTG++V+    ++ Q+ I++L+T A L +   L P+    +  ++     + F+T+F  LL+K DV+DE +G   +  G IL + N  LF  A  +++W
Sbjct:  590 IDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGEGVAVGVIFVSALAV----------------------------GGAALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSC--------RQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAG-ILVVTNLVLFGAAVAEMVW 1018

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BLAST of Ec-28_000530.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 1.630e-51
Identity = 140/463 (30.24%), Postives = 219/463 (47.30%), Query Frame = 3

Query:  330 TLEAGFWRTSNTSDIVYECPNADACVGGATVET-YCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNV---MTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVR-TRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQIL 1703
            +++ G+WR +N+S  V  C N DACVGG T  T YC +G++GP CA+C +DY     + C +C   N A                                        A  S V   +   T   +   +K++     +  KILV  +QIVT F    +V +P+ + R+ + + V + D   +LS  C    DF  +L+ +T+ P+  +  L A Y    R  R   A+ +  +D     VLL  F  Y   S+++ + F C   + G  YL+AD+RI C S+K+    VYA  M +++P GIP  Y A+L   ++ +  DP         RE    +     LW  YRP+VYYYEV EC R++ LTGL+V+    T+ Q+ I +++T+    +   LRPY +  +  ++  S  V F++++  LL+K DV++E G           +  A L A  A  IL
Sbjct:  562 SIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCP--NRAGGILLATALAVIGLFTVV----------------------AVVSYVAWRVDPNTGCAMAGHLKRYLPLQTL--KILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPIMALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDG-------REDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQ-------KVFEAVLVAAHACMIL 984

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BLAST of Ec-28_000530.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 2.080e-50
Identity = 147/498 (29.52%), Postives = 227/498 (45.58%), Query Frame = 3

Query:  171 CEAGRELEVSLEGTSLEISCNLC---LENFYKAEESADP-CLACGDGLVSEVGAVVC---TLEAGFWRTSNTSDIVYECPNADACVGGAT-VETYCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMTVGTNSKVFKFIKQWKDTLVVRF------KILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVRTRSTEASR-RAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADE 1619
            C AG    V+      E  CN C    +    AE S  P C    D   S+ G V     +++ GFWR S +S  V  C +ADAC+GG T    YC +G++GP C +C + Y    S+ C +CS  +A                                           A  V++  T+ +V    K     LV R+      KI++  +QI+T F  V +V +P+ +    D + V + D   LLS  C    +F  +L+ +T+ P+  + +L   YA   R    E  +    ++     VLL  FF Y   S+ +  AF C D D    YL+AD+ I C S+++  I VYA  M +I+  GIP  Y  +L+  ++ +  +   P+     RE    +K    LW  Y+PAV+YYEV EC R++ L G++V+    T+ Q+ + +LI  A   +  GL PY    +  ++     V FL+++  LL+K DV+DE
Sbjct:  995 CPAGTFRNVTGSVDHFEAICNGCETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFL---------------------------AVAVVSYVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNIIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDED--PD-----REEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDE 1458

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BLAST of Ec-28_000530.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 4.450e-50
Identity = 145/498 (29.12%), Postives = 232/498 (46.59%), Query Frame = 3

Query:  171 CEAGRELEVSLEGTSLEISCNLCLENFYKAEESADPCL-------ACGDGL--VSEVGAVVCT----LEAGFWRTSNTSDIVYECPNADACVGGATVET-YCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVR-TRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADE 1619
            C+ G  L+ +  G   E +C  C       E + D C         C D +  ++  G  V      +E G+WR S +S+ V+ C N+DAC+GG T    YC  G++GP CAVC + Y    ++ C  CSGG                                        A+ A +  V  V   S V   + Q+     V  KI++  +QI+T F  V +V +P+ + R+ D + V + D   +LS  C F  DF  +L+ +T+ P+  +  L   YA  V   R    S +  ++     VLL  F  Y   S  + +AF C++ +DG++YL+AD+ I C S+K+    VYA  M +++  GIP  Y  +L+  +  +     H +     RE  A    T  LW  Y+P+V+YYEV EC R++ L G++V+    T+ Q+ I +++  A + V  GL P+  + +  L      V F++++  LL+K DV+ E
Sbjct:  742 CDPGMYLDYNASGNPYEAACGGC-------ETACDGCFFEPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGR-------------------IALAAVLAVVVLCVAFAVASYAMSGRVGDV--RSGVVARLGQYIPLQSV--KIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDH--HAD-----REQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGE 1202

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BLAST of Ec-28_000530.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 1.990e-48
Identity = 140/476 (29.41%), Postives = 218/476 (45.80%), Query Frame = 3

Query:  315 GAVVCTLEA--GFWRTSNTSDIVYECPNADACVGGATVETYCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMTVGTNSKVFKFIKQWKDTL------------VVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQY-AKTVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQ 1697
            GA + TLE   GF+R+S TS  + EC +  AC GG+ V TYC++G+ GP CAVC   Y P  S  C  C G +  S                                    A  +   +V+ VG   +  +  K W+ T             +   KI+V  +QIVT +  V  V++P A+  +   V V++LD   +LS +C +  +F  +L+  T+ P+ ++ +L   Y     R R  E + R          L   F  Y   S  I E F C   DDG+SYL+AD+ ++C +  +T   VYA +  +++P GIP  +   L+  +  +  +          RES A ++    LW  Y+P+ YYYEV EC R++ LTG  V+    +S QV I +L+    + V   L P+ R  E  L  A  +V F +++  LL++ DV+DE          ++ I + A+F +   Q
Sbjct:  585 GATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSALVFAAAIGALALAAVV-------------------ALVSRLVSVVEVGPPQQ--QGSKGWRRTCSAWQARVRQTVPLTAVKIVVVVWQIVTQYSDVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQED---------RESQAELRPAADLWEPYKPSAYYYEVVECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQ 1030

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BLAST of Ec-28_000530.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 3.620e-48
Identity = 144/488 (29.51%), Postives = 240/488 (49.18%), Query Frame = 3

Query:  228 CNLCLENFYKAEESADPCLACGDGL-VSEVGAVVCTLEA--GFWRTSNTSDIVYECPNADACVGGATVETYCSDGFKGPLCAVCENDYYPSGSYECLECSGGNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMTV-GTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAK-TVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAAL 1676
            C+    +   A+ +   C+   +G   S  G  V TL+   G++RTS  S +V EC    AC GG   + YC+DG++GP C+VC + Y P  +Y+C ECSG +  S     XXXXXXXXXXX                      D +  +  T+ G  S+   F+        V  KI+V  +QI+T F  +    +PE +  + + ++ ++LD   +LS SC    DF  +L+  T+ P+ ++A+L   +     R   +EA+ RA  +      L   FF Y   S  + + F C   DDG SYL+AD+ ++C + +Y     YA +M  ++P GIP T+  +L   ++         ++    R+  A ++    LW  Y+P+ YYYE+ E VR++ LTG+ V+   G+S Q+ + +L+ +  L +   L P+ ++ +  L      V   +++  LL+K +V++E      A  V+L + N  +
Sbjct:  548 CDAIPSSVTMADSTIPVCVESMEGTKASSSGTTVATLDLQEGYYRTSAESQVVVECYLTSACAGGTDPKNYCADGYEGPYCSVCADGYAPGTAYQCHECSGTSMGSAVGVAXXXXXXXXXXXAVVAADLVRVVD---------GDDSIKDARTLKGRLSRFHAFVVTAFPLTTV--KIVVVAWQIITQFGAIAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQ---------DLQKADRDRLANLQPLGDLWEAYKPSRYYYEIIEYVRRIVLTGVAVFVLPGSSAQMAVVLLLAVVFLFISESLSPFTKKIDMALYRWGNGVVLASIYVALLLKVNVSEEGSETLSAFVVVLILANVCM 1015

[Close]

BLAST of Ec-28_000530.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE)

HSP 1 Score: 193 bits (491), Expect = 6.010e-48
Identity = 146/500 (29.20%), Postives = 238/500 (47.60%), Query Frame = 3

Query:  162 VSTCEAGRELEVSLEGTSLEISCNLCLEN---FYKAEESADP---CLACGDGLVSEVG-AVVCTLE--AGFWRTSNTSDIVYECPNADACVGGATVE-TYCSDGFKGPLCAVCENDYYPSGSYECLEC---SGGNAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANDAAASNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPEAFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMAQYAKTVRTRS-TEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDFDDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGKERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLFLTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLWVTFLTLFAGLLIKADVADE 1619
            V +CE G  L+ S++G   +  C+ C  N   +  + E+ D    C+   D   SE G   + TLE  +G+WR +N S  V  C N DACVGG T +  +C  G++GP C+VC   Y  S ++ C EC    GG A                                            S  M       + + +K+     +   KI+V  +QI+T F  V +V +P+ + R+ D V++++ D   + S  C  + DF  +L+  T+ PL  +A+L   Y    R  S +EA+ +         VLL  F  Y   S  + ++F C+D DD   YL+AD+RI C S+++    V+A IM +++P GIPL Y  +LY  +  +  +         KR++   ++    LW  Y+P  +YYEV ECVR++ LTG++V+    T+ QV + ++I  + +     L PY  + + +++     + F +++  LL K DV+DE
Sbjct: 1256 VLSCENGMYLD-SVDGDRYQTVCDGCPVNNSDWIVSVENGDRVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHL-----------------------VSGEMEGARRGVIHRVVKRLPLQSI---KIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAG------KRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDE 1722

The following BLAST results are available for this feature:

BLAST of Ec-28_000530.1 vs. uniprot

BLAST of Ec-28_000530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K6L1_9PHAE	0.000e+0	95.49	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G9D7_ECTSI	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CJ54_9STRA	2.180e-83	34.90	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7FRV1_ECTSI	1.570e-52	29.83	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FHH1_ECTSI	1.630e-51	30.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K0E9_9PHAE	2.080e-50	29.52	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7G301_ECTSI	4.450e-50	29.12	Polymorphic Outer membrane protein G/I family n=1 ...	[more]
D7FTT9_ECTSI	1.990e-48	29.41	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JSF5_9PHAE	3.620e-48	29.51	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JY65_9PHAE	6.010e-48	29.20	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:526835..540061 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	207.6
Seed ortholog evalue	1.8e-50
Seed eggNOG ortholog	2880.D7FRV1
Length	2061
Hectar predicted targeting category	signal peptide
Gene id	Ec-28_000530.1
EggNOG OGs	2BFIX@1,2S176@2759
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000530	Ec-28_000530	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_28 526835..540061 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000530.1.1	Ec-28_000530.1.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 526835..527007 +
Ec-28_000530.1.2	Ec-28_000530.1.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 528879..528980 +
Ec-28_000530.1.3	Ec-28_000530.1.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 529741..529829 +
Ec-28_000530.1.4	Ec-28_000530.1.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 530364..530456 +
Ec-28_000530.1.5	Ec-28_000530.1.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 531275..531371 +
Ec-28_000530.1.6	Ec-28_000530.1.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 531877..532017 +
Ec-28_000530.1.7	Ec-28_000530.1.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 532649..532777 +
Ec-28_000530.1.8	Ec-28_000530.1.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 533363..533521 +
Ec-28_000530.1.9	Ec-28_000530.1.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 533723..533924 +
Ec-28_000530.1.10	Ec-28_000530.1.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 534281..534438 +
Ec-28_000530.1.11	Ec-28_000530.1.11	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 535261..535375 +
Ec-28_000530.1.12	Ec-28_000530.1.12	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 535994..536115 +
Ec-28_000530.1.13	Ec-28_000530.1.13	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 536897..536941 +
Ec-28_000530.1.14	Ec-28_000530.1.14	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 537605..537677 +
Ec-28_000530.1.15	Ec-28_000530.1.15	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 538434..538504 +
Ec-28_000530.1.16	Ec-28_000530.1.16	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 539292..539449 +
Ec-28_000530.1.17	Ec-28_000530.1.17	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 539928..540061 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000530	5UTR:Ec-28_000530.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_28 526835..526897 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000530.1	CDS:Ec-28_000530.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_28 526898..527007 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000530.1	Ec-28_000530.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_28 526898..540061 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_28:526835..540061+
coding sequence from alignment at chr_28:526835..540061+

mRNA sequence

>Ec-28_000530.1 ID=Ec-28_000530.1|Name=Ec-28_000530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=666bp
MGRAGVALAGWTILLCFSSVAAQNESCTTETCGVSTCEAGRELEVSLEGT
SLEISCNLCLENFYKAEESADPCLACGDGLVSEVGAVVCTLEAGFWRTSN
TSDIVYECPNADACVGGATVETYCSDGFKGPLCAVCENDYYPSGSYECLE
CSGGNAASSMITIILFLAALAVFLVVLSKASSTLEEKAREHDDDANDAAA
SNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPE
AFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMA
QYAKTVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDF
DDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGK
ERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLF
LTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLW
VTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTT
SQFFKEKCGGAFGIDISKKQRPDGQGPSSGRVGEQYQQHLQQQQQRQQQR
QQQHAPLSASPEARTARAGRPDVRPFEQSPRHRSPVPMNNPIRGGGRVPQ
QSGKANNYRSAGSVA*

spliced messenger RNA

>Ec-28_000530.1 ID=Ec-28_000530.1|Name=Ec-28_000530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=2061bp|location=Sequence derived from alignment at chr_28:526835..540061+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
CCCTGCGTGCATGGGTTGAAGAACGGACAGCACTTCCCTTCTCTGCTGAA
CACTTTCGGCACCATGGGACGCGCAGGCGTGGCGCTAGCTGGTTGGACGA
TCCTCTTGTGTTTTTCCTCCGTCGCAGCCCAGAACGAAAGCTGTACAACC
GAGACGTGTGGCGTGAGCACCTGCGAGGCTGGGAGGGAGCTAGAGGTCTC
CCTTGAAGGAACGAGCTTGGAGATCAGCTGCAACCTTTGCTTGGAAAACT
TCTACAAGGCCGAAGAAAGCGCAGATCCTTGCCTGGCCTGTGGCGATGGA
TTGGTATCGGAAGTAGGGGCAGTCGTTTGCACTTTGGAGGCCGGGTTTTG
GAGAACCAGCAACACCTCGGACATCGTGTACGAGTGCCCCAACGCGGACG
CTTGTGTTGGCGGAGCCACTGTAGAGACGTACTGCAGCGACGGCTTCAAG
GGGCCACTGTGTGCCGTCTGCGAGAACGACTACTACCCCAGCGGCAGCTA
CGAGTGCCTGGAGTGCTCCGGGGGTAACGCTGCATCCTCCATGATCACCA
TCATCCTCTTCCTTGCGGCGCTAGCGGTGTTTCTGGTGGTGCTGTCCAAG
GCGTCGTCGACGTTGGAGGAGAAGGCGAGGGAGCACGATGACGACGCCAA
CGACGCCGCGGCGAGCAACGTCATGACCGTGGGAACCAACTCCAAAGTGT
TCAAGTTCATCAAGCAGTGGAAGGACACCCTGGTGGTACGGTTCAAGATC
CTGGTAACGCACTTCCAGATCGTCACCACCTTTCCCGTCGTGCTCGACGT
CCAGTGGCCGGAGGCCTTCAACCGATACGCCGACAAGGTTTCTGTTATCA
GCCTGGACTTCTGGGGCCTGCTGAGCCAGAGCTGCTGGTTCCAGCCCGAC
TTCCTCAAGCAGCTCGTGTTTACCACGCTGCTGCCGCTCGGTATCGTGGC
TGTCCTCATGGCTCAGTACGCCAAGACCGTCAGAACGCGCAGCACGGAGG
CGTCGCGGCGCGCGGCTTTCGACAACACGGCCGGAGGCGTCTTGCTGACG
GGGTTCTTCTTCTACATCGTCACGAGCACGCTCATCATGGAGGCGTTCGA
CTGCCAGGACTTCGACGACGGATCGAGCTACCTCAAGGCGGACTTCCGCA
TCAGCTGCGGCAGCAACAAGTACACCTTTATTTACGTTTACGCAATCATC
ATGGCCATCATCTTCCCGGCGGGCATCCCTCTCACCTACCTGGCCGTGCT
GTACCTGGGGAAGGAGCGGATCAACCCCGACCCTGTCCACCCGGAGGTTT
CGATCAAGAAGAGGGAATCCGACGCCACGATCAAGAAGACCAAGTTCCTG
TGGGGGACGTACCGGCCAGCGGTGTACTACTACGAAGTGTGGGAGTGCGT
CCGAAAGCTCTTCCTTACGGGTCTGCTCGTCTACTTCGAGCAGGGAACAT
CTACGCAGGTGGTGATTGCGATGCTCATCACCCTCGCGGGACTCCGCGTT
CTGGCCGGTCTTCGGCCTTACCAGAGGGAAGACGAGAACAACCTGGCCGA
GGCTTCGCTCTGGGTGACATTCCTGACGCTGTTTGCGGGGCTTTTGATCA
AGGCCGACGTCGCCGATGAGGATGGGTACGACACCGTGGCGTTGGGAGTT
ATCCTATCGATCATGAACGCGGCCTTGTTTGCATTGGCTGCATTCCAGAT
CCTGTGGACTACGAGCCAGTTCTTCAAGGAAAAGTGTGGCGGAGCATTCG
GAATCGACATCTCAAAGAAGCAGAGGCCGGACGGGCAAGGGCCCTCTTCC
GGCAGGGTCGGCGAGCAGTACCAGCAACACCTTCAGCAGCAGCAGCAGCG
GCAGCAGCAACGGCAGCAGCAGCACGCGCCGCTATCCGCCTCTCCCGAAG
CGCGGACCGCAAGGGCCGGCCGCCCAGATGTCAGGCCTTTTGAACAGTCT
CCTCGCCACCGCTCGCCGGTGCCGATGAACAACCCGATCCGCGGAGGCGG
GAGGGTACCCCAACAAAGCGGCAAGGCCAACAACTACCGCTCCGCTGGCT
CCGTGGCCTGA

protein sequence of Ec-28_000530.1

>Ec-28_000530.1 ID=Ec-28_000530.1|Name=Ec-28_000530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=666bp
MGRAGVALAGWTILLCFSSVAAQNESCTTETCGVSTCEAGRELEVSLEGT
SLEISCNLCLENFYKAEESADPCLACGDGLVSEVGAVVCTLEAGFWRTSN
TSDIVYECPNADACVGGATVETYCSDGFKGPLCAVCENDYYPSGSYECLE
CSGGNAASSMITIILFLAALAVFLVVLSKASSTLEEKAREHDDDANDAAA
SNVMTVGTNSKVFKFIKQWKDTLVVRFKILVTHFQIVTTFPVVLDVQWPE
AFNRYADKVSVISLDFWGLLSQSCWFQPDFLKQLVFTTLLPLGIVAVLMA
QYAKTVRTRSTEASRRAAFDNTAGGVLLTGFFFYIVTSTLIMEAFDCQDF
DDGSSYLKADFRISCGSNKYTFIYVYAIIMAIIFPAGIPLTYLAVLYLGK
ERINPDPVHPEVSIKKRESDATIKKTKFLWGTYRPAVYYYEVWECVRKLF
LTGLLVYFEQGTSTQVVIAMLITLAGLRVLAGLRPYQREDENNLAEASLW
VTFLTLFAGLLIKADVADEDGYDTVALGVILSIMNAALFALAAFQILWTT
SQFFKEKCGGAFGIDISKKQRPDGQGPSSGRVGEQYQQHLQQQQQRQQQR
QQQHAPLSASPEARTARAGRPDVRPFEQSPRHRSPVPMNNPIRGGGRVPQ
QSGKANNYRSAGSVA*

mRNA from alignment at chr_28:526835..540061+

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-28_000530.1 ID=Ec-28_000530.1|Name=Ec-28_000530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=13227bp|location=Sequence derived from alignment at chr_28:526835..540061+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
CCCTGCGTGCATGGGTTGAAGAACGGACAGCACTTCCCTTCTCTGCTGAA
CACTTTCGGCACCATGGGACGCGCAGGCGTGGCGCTAGCTGGTTGGACGA
TCCTCTTGTGTTTTTCCTCCGTCGCAGCCCAGAACGAAAGCTGTACAACC
GAGACGTGTGGCGTGAGCACCTGGTGAGAGAGCGAGAGAGAGAGAAGAAA
GTGCGGTGCAAATCCTTTTCTTTCGTGATCCCATCGTTTGTCGGGTAGAG
GGGACAGGCTTCGGAACTGTTTTTCGTGACAGCGAGCTACAGCTTTCACG
GTGGTGCGGGAGGGAGATACGGATAGATAGGCCCGCTGCACCGGACTTTC
TGGTGGTCGGCATGCTCCCCAGCTGTCAGATTTGAAGGCTGCGCTCTGTG
CCTTGGAAGTCAAAATTCTCTGCAGTGTGCGGCGAAGGAGTGTAATTTAC
GTACGAAGATGTTCTGCCTACTTTGCCGGCCAAACCAACAGCCAACAGCA
GTTGCGTGTCCGCTGCCCAATGGTTGCTCGGACCACAAACAGACAGTCCC
GCGCGGAGCTTGATCCCTCGACCAGCCCCAATAGAGCTTTGCTACTCTCT
GGCTCTCGTTGGGTCCCTTCCCCGAGTTTCGGTTTAATTGGTCCATTGAC
GGATGATTTTCTTGTGTCATCATCTCCGAGCTGTTCGACTCTCACATCAA
GTGTCCAACCTTTGGTCACGAGTAACGGCACCTGCGGCAGATAGAGGTCG
AGAGAGCTGTGGCGCTGTAGCTCACAAAACGAGCTCTCTTGTGTGCATAG
CGGTGGAATGGTTTTTCGGTTTGGGCACCAGCGCGGCCGGCTGTCGGTGT
CAATCACTTGAGCGAGCTTGTACCTGTCTGTTGCAGAATTGTGAGTTGAT
GCACGCGGATTGTTGTTGGCTCACCTTGATGGATAAAATGTAAACCGCAC
GCACAGCAGTGGCTGCACAATAACGCGTACATTCATTTCGTACGACGCAG
CACCGCCGTGTCAAGAATTCTGCAGCAGTGGGTATGCCTGCTCCAGACCT
TTCGTGCCATGGGAAATACCGAACACCTTTTGTTTCTATAAGTATTTGTT
CGCGTTTTTCTTGGAGTGGGTGGGGGGGCCGAAGCAACGAAGGATCGCCC
GGGGGAGGCTTACACTAGGGACCAGCAGCAGCTCCCGTGTTCGGCGCGTC
TGAACCGTGCGCGGGACGCAGGTGGTAGAAGTAGTTACTGTGTAGTTGTA
CGATCGCCCTTCAAGCACCTGCTGCAGTGTCGTCCGTCCTTAACGCCTAG
GACCGACCTCGCCGGCATATAATTTGCTCTTGCTTCTGTCCAGCCTCCCT
CGGTGCCCCTCCAGACAACGGGGTTCAGAGATTGTTTCAGCGTGTCTACC
GACCCTTTACTACTACTTGTACTGCAAGTACTTCGAAGTACATACAGGTA
AAACTGGCGGCTTTGCTCAGTTCAGCCGGGTATCGTCGTCCGAGCTTGCT
ATTCGTGAATGGAGGAAGACACGCCGTCGGGGCGGCGAAACCCGCTCGTG
CCAGAAGAAGCACGCCGTTCTTGGGAGAGACGGCTATTGGCGTTGCACGT
ACTGCAGTGCAAGCCGACCACCCCACCCCACCCACAAGACCCTTCGCACC
TATTTATACACCTCGACGGCGTTGAAGTGAAACGCGAGTACCTGCTGTAG
GGGGGGGCGTCGAAATACCACACTTGGTTTTGAACGGAACCCTGAGACGC
AAGGGCTCAGACCGCATCGCCTTTTTTGGTTCCGGTGGAGTAGCACGATC
CACCAAGGTTTCGGCCGAAGAACATGACTTCTTTCTTGACCGCCCGTCCG
TGACGATACTACCAATTGATTGCAAACCCTGCATCACTCTTTCTATACTG
CCAACTGATTGCAACCCTACCTTAGGCTTTTGACCTGCGATGCTGTGCAC
TCCACACAACCCCGTCCACTTGTGCGAACCGTGTACGTATCATTCGACAT
TCGTTGTTGTCTCGTTCTGTTGCGAAAAAATCCCCGGAACTTAGCGAGGC
TGGGAGGGAGCTAGAGGTCTCCCTTGAAGGAACGAGCTTGGAGATCAGCT
GCAACCTTTGCTTGGAAAACTTCTACAAGGCCGAAGAAAGCGCAGAGTGA
GAAACCCAACTCTTAAGTGACGATTACGTGTACCCCGCGCAACGAATGAG
GAAGATCTCGTGGCAATCCACGAACAAGAATTGCCACTTGTTTTGCGGGG
TACGTTTTCGTCTATACAACTCTCCCGCGCTGTTCGTCTCGACCGCGCAA
TCCGTGCTGCGGGTTTGTCCGACAACTGGGGAGTGGGTGCGCGGACGAGA
CTAGAATAAACGGCACAGCAATCTCCACATTCACAGGAGTGGAGCTTGCT
GACGAATATTACACATACAGTCGTAGGCCCTCTATGAGGCGGGTATGCGC
CAGACCGGCTCACCCGCCCCATGCAGGGCACCCGCCTTATTCAGTGTATT
AACCGTCTTGAATATTCCAACTGTGCCAGCCAATTTCACCCGCATCTACA
GCGGGCACTCGCCTTATAGAGGGCCTACGACTGTACCGTCACCCTGATTA
GTTTGCAGAACCAACAAAGAGTTATTGGCTTTAGCTTTTAGTGTGGGATG
GGGTCCCAAGTTGTGGCGGGTTCTGCAGCAGTGCCACTGGCACGGGTTGT
TGTCGCATTTGCGAAACGTGTGTCGTGCGTGCGCTAAAAAAAAACGCCGC
TGACTCTCTCGATCGGTGCCGTGCTCCGCCGCGCTTCTTTCGCTTGGGCC
CCCGTGCGCTGGTCTTCAAAATCTCCGGGCTGCTGGTTTTATTGCTGCGC
TTCTTTCTGGAACGCCGCGGGGGCGGGACCTGACGGCGATGGCGATCGGT
TGTCAGTCCTTGCCTGGCCTGTGGCGATGGATTGGTATCGGAAGTAGGGG
CAGTCGTTTGCACTTTGGAGGCCGGGTTTTGGAGAACCAGCAACAGTGAG
TCGCGAGGCTGTATGATGAGTTGAATCCGGATTTACTTATTGCCGCAGAA
AATTATGTAGATAGCGGATTAAGCATAGATGGGGATTTTTTTCCAACCAC
GATTTTACGGAACCCCCTACGCGGGTACAATCGAGAGGCCTTCTGCAAGC
AGCAAGTGGAGTTGTAAGGCGTGTACTATTTGTAGTTTTTTCTCACCTCC
ATCTCGCTTCTGTGGGAAACGTGCTGCTGCTTCTGCGACGGTTTTGGCCT
CAACGGCTAGCGGTGTGCAACACTCTGGAGAGAGCCAGCAGTGTGCCGTG
CCCAGCCTATTGGAGACCTTTACTATTGTACAATGGTCCAGGCCATGTGT
TGAATCATTCGGAGTCGTCGCTGCAACCGCCCTCGTTTTCGAAATTCGTT
GATCGGTTGTTCTCTTCCGTGGTCAAAGCGCGAACCATACGCGTACGTGC
TGATCGATCGTTATTTTTTTTTTTGTCGTTGTCGTTGTCGTGGGTGGTTG
TCTCTTCTGCTGTGTCCCTTCGTCTTCAGCCTCGGACATCGTGTACGAGT
GCCCCAACGCGGACGCTTGTGTTGGCGGAGCCACTGTAGAGACGTACTGC
AGCGACGGCTTCAAGGGGCCACGTGAGTACTCATCCATACACCTACGTAG
CAACAGGTCACAACCGCCGGGTCCCCTCAGATCCGCATGTTAGTCACGAG
TCTCGCCTGCGCTGCAAGTGTTGCTAGTCTGTAGATCTCGGTCTGCGAAC
GGTGCGTTCAAGGCACCGCCTTCAACGGATATACCCGAACCTCGTTCAGC
GAAATGGCCTTGGGCGCTACAGGGCGGGCAAAGCTCGGCGTCGCTGCTAC
TCTCGAGTTTGCCGCGCCTGCACCCAAATTGTTAGACTAATAGCATGGTC
TCAATCAACCAACACAATAGTGTTCCCTCTATTCCCTCCCGCTCGCACCC
AGCGTTCCACTTCCTGTTGGTGGTTGTGTGTTCATACGCCGTTCTCTTCT
TTTTTTTCGTTTTGTCGTATTTTTGATAAACCCTTTCTTGTCCTGTCTAA
TTCTAAAGCACCCAGTGGGCGGCGCTGAACGTTGTATGGGGTGTGTGGTG
CGCTCCGTCTTCTTGCGACAGTGTTGCTGGTAGTCGTTGTTTTGGTGCCA
TTTCCTCCCCAATAGACCGCGACCTGTCTCTTGAAATCATCGAGAGGCAG
GGCCCGCCCGAAGTGCTTCGACGGGTCGTGGCTCGTGATGCCGCAAGAGC
GGTGTACTGCTGCACCGCGAATGAAACGTCGTCTCCCGACCGACCCCCCG
GTGTGTCGATTCATTCACCCGCCCTGCTTTCCCGCATCCGCCGCCAAGTC
GTACGTATCATGTCGGTGTGTTGTTGTGGCTCCGCACGAACGCTGCTAAC
ACCACCACGGCAACAATAACGTTCAAAACGACGTCGACAGTGTGTGCCGT
CTGCGAGAACGACTACTACCCCAGCGGCAGCTACGAGTGCCTGGAGTGCT
CCGGGGGTAACGCTGCATCCTCCATGATCACCATCATGTGAGACCCCCAG
CAGCTGCTGTCGTCAGCATGGGGCGCCATCTCCGCATCAACTGTGGTGGC
CTTCGCCCGTAACGCCCCCGCCCGCCCCCCCACCCCCCATAGATAGGTTA
GGGGAAAACATTTTTTGTTCCTCGCCTAGCGCGTAACTAAGAGCTTCCCA
CCTCATCTCCTGTAGGTGCGTACGCCCTTTGGGCTGGCAGCGTTTGGCCA
GAAACTCGGCTGATCCGTCCACGTGCGTAGTAGAGACACATCGCGAAGCG
GCCACACAGAAAGCTAGCGTAGAAGTATGTACGCGGAAGCTCTTACTCAG
TTCCACCGCGTGCGTAGCGATTTCTCCGGAGGCGTTTAGGTGATCTAAGC
AGAGGAGCACAGGATGCGTGCTAGATATTAGTTAACACACGCTTGCCGCC
CCGCTGTTTGCCCTTGACTTGATCGGTTTGCTGTGTCTTTTTTTTATGGC
ATATGTATCCGGACGGCATGTACACACGTGTGAAAAAAACAGCCTCTTCC
TTGCGGCGCTAGCGGTGTTTCTGGTGGTGCTGTCCAAGGCGTCGTCGACG
TTGGAGGAGAAGGCGAGGGAGCACGATGACGACGCCAACGACGCCGCGGC
GAGCAACGTCATGACCGTGGGAACCAACTCCAAGTGAGCCAGGGGGTACC
TATGAGGGGGGGGGCGGGGGCGGGGGGGCGTCTGCGCTTCCACGGGAGGA
ATCGGGTTCGGTTGGGTCGGTCTCTCACTTGTGTAGATGAGAGGGATGAG
TAGTCAAGCGTACAGTGCGTTTGTGGCGTGTATGTAGAACGGGTGACGTT
GTTTCTCCATCGCAGAGTAAGTCTCACGTTACGGACGCACGGCCGCCGCT
GCACCTGCCGCCGCCGCCGCCACGATGTCGGCCGATGGCGGCGGCAGTGG
CGGTGGAAGCGAGTGAGTTGTGCCGGGTATGTTTCATGGCCAGAGGTGCG
TCACCGGTCGGAGTACCCAGGACAAGCTAGCTCACAGGGTAGAGAATCGT
GCATGGCGCCCTACCTTGCTGTCTACCCAACCGCAGAGCTTCCATGGTGG
AAGCCTGGTCCTTCCTTGCTATCTGCTCAAGCGCAGAGCTTCCTTACTTG
TCTACCCAACCGTTGAGCTTCCATGGTGAAGCAAGCCTGCCTCGGGTTAA
GCTTGGCGGGAAATGGGCGGGAGGGAACGTGAGGAGGTCTAATCCCTGCT
TCCGCTCGCTTCGCTACCCACGTGTCTGCGTCATAACTACCATGCGTTAC
TGCTGTACCACAAGAGTGTTCAAGTTCATCAAGCAGTGGAAGGACACCCT
GGTGGTACGGTTCAAGATCCTGGTAACGCACTTCCAGATCGTCACCACCT
TTCCCGTCGTGCTCGACGTCCAGTGGCCGGAGGCCTTCAACCGGTGTGTG
TGCTGCGCTTGTGTGTGTGTTTCTTTTTTGTTTCTGTTGCAGCACCTGGA
GGCCGTCATCCTGTGTGTGCTGGTGCTTGTGTGTGTTCGTTTTTGTTTCT
GTTGCAGTACCTGGAGACCATCAACCGGTGCGTGCTGGTGTGTGTGTGTT
CATTATTCTGTTGTTGCTAGCACCGGCCGCGACGCCAGTCTCAAAGACGA
CAGTTCCAATGCGGCTAAGTACGGAAAACGCTTCAAAACACCATGATCTG
GGACCCCGTGAGGGGGCGGCTTTTGATTGGCTTGTGCGTTTGTGTGCACG
CACCTGTGGTTTCCCGTGTGGGCGAGAGAGCCCGTCCCCACGCCGGGGCG
GTCTTGGCATCTTCCTGTTTCCTGTTTCGTTTGATGTGCTCAAGGTATTA
CCGCGTTTGGAGGATTGTGTCTCTGGATGCATTTTGTTTTTTAGTCCTAG
AAAGGTGTTCGTCAGTCGCGTCGCATCGTTTCCGGTTCGATGAGGCTCGA
AGCGTCTGATATGCACCTCAAATTGTGTTCACTTGCGATTGTATATCCCT
GCCCCCTCGCCCCCCCCCCTGCCCAAAGATACGCCGACAAGGTTTCTGTT
ATCAGCCTGGACTTCTGGGGCCTGCTGAGCCAGAGCTGCTGGTTCCAGCC
CGACTTCCTCAAGCAGCTCGTGTTTACCACGCTGCTGCCGCTCGGTATCG
TGGCTGTCCTCATGGCTCAGTACGCCAAGACCGTCAGGTGTGAAGGAACG
CTCCCGTGTGTCTGCCGTTGTGTGTTAATAGGCTGCTTCATCACTCGAAA
TCGATTTGAAGATGTCTGCAGGCCTTTACGCACTATGTCGGTACCAGTGC
CATCAGCTGCAGTCGCACGAGTGTAAGTCTCCATCATGGGTGCATGTTCT
CACAAGCCCCCCCCCCCCCCGTCTATATACCTCCTCAGAACGCGCAGCAC
GGAGGCGTCGCGGCGCGCGGCTTTCGACAACACGGCCGGAGGCGTCTTGC
TGACGGGGTTCTTCTTCTACATCGTCACGAGCACGCTCATCATGGAGGCG
TTCGACTGCCAGGACTTCGACGACGGATCGAGCTACCTCAAGGCGGACTT
CCGCATCAGCTGCGGCAGCAACAAGTACACCTTTATTTACGTGAGTGGTG
CTACTGGGTTAGCTGGGTAGCTGTGCCTGTGCAGCGCCGGTGGTGCCCCG
CATCCTCTGAGAGGAGGAAGTAACCTCGCCCGTGAGGCATCTCCTGTTCG
TGTGCGGTCGCGTCGGAATCTTCTTGGCTCATGCGTACATGGCACACTGT
GTTCTTTTTCATGCTGTTTGATTTGCTTTTGCTACAGAGCGAGCAGTCTT
GCAAGTTTTAGGCAAGGTAAGTGCTTATCCTGCGAGCGATACTCATCTCC
TGCGAATTGTATAAACCTTCTCAGTTGTAGTACCACGGTCGTGTGCCACC
TCCGTATGTTTTCCTAAACTTTTGTGTGTGTGTGTGTGGCTTCTAGGTTT
ACGCAATCATCATGGCCATCATCTTCCCGGCGGGCATCCCTCTCACCTAC
CTGGCCGTGCTGTACCTGGGGAAGGAGCGGATCAACCCCGACCCTGTCCA
CCCGGAGGTTTCGATCAAGAAGAGGGAATCCGACGCCACGATCAAGAAGA
CCAAGTGAGTTTGATACCGGTGGACGACGGGCTTGCCGGCTGTACGCACG
TTTTTTGCCCTCAATCAACCCTTGGACGAGCGCACTCTTCCCTCTCGGGT
GCGTCGACGCTTATCTGGTGCCGGGGTGTTGGAGTAAAAAAACACACGAA
AAAAGAGCGGAGACGTCTACGATGAATGTCGTAGCGGAGGACATTTTGGA
GCAAAGACCCGAAACGACGGTAGAAATCGGGCGTTCATTGAACCAGCCCG
GCCTGCCCCCCAGCCGTGATTGCCGTGGGTTGCAGAAGGTAACAGAACGC
CCCTTAAAAACCGATTTTCTGATTTCTTGTGAGTGTGCGGCACGAACATT
GCACACAGCAGTGACGGTGCCAAAAATGTCGCCCGTCTCGTAGACGAACT
TTTCTGAAAACGTGTCCTTTTGATGTTTGGCGTTTCTGGCGGAGAAATCG
AGCTATTGGGATCGGTCCAGCGGGTGTGATTTATTGCCAAACATGCTTGT
CGAACGACTTGCTTGTCGAACGACTTGCTTGTGGGACAACTTGCTTGTCG
AACGACTTGCTTGTCGAACAACTTGCTTGTGGGACAACTTGCTTGTCGAA
CGACTTGCTTGTCGAACGACTTGCTTGTCGAACAACTTGCTTGTGGGACA
ACTTGCTTGTCGAACGACTTGCTTGTCGAACGACTTGCTTGTCGAACAAC
TTGCTTGTGGGACAACTTGCTTGTCGAACAACTTGCTTGTGGGACAACTT
GCTTGTCGAACAACTTGCTTGCCGTGTTCACTGAGTTGCCTCCGTTCCTC
CGTGGGTTTGGCGTGTGTGGTTTCAGGTTCCTGTGGGGGACGTACCGGCC
AGCGGTGTACTACTACGAAGTGTGGGAGTGCGTCCGAAAGCTCTTCCTTA
CGGGTCTGCTCGTCTACTTCGAGCAGGGAACATCTACGCAGGTGCGTAAG
GCCAGCGAGCAAACCACAGGGACAAAATAAACACTACAGGAGTTACAGAA
GAAAAACGAAATCAGAACTACGACGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGCAAAGGGGCCGACGTCACACGCGAGAGCAATGCGGAGCGG
CGGGAGGCGATGAGCTCCCATCAACGTACCTATCCGTCGTGACCCCATCA
ATGCTTTGTCCCGTCACCCTATCAAAGTGCCTATGATATGTATCCGCTAA
GCCATCAATGCATTCATTGCCGCCAACTGTATCCATCCCGCACCGCGGTG
AAAGAGTGACGACAACAACAGCGGCAATATCCGTAGCGAGTTTTTACTTC
CCCTGGCAGCTGTTGCGTTGCAAAACAACCGATCGACCACGAACTTTCAC
CAATCGTCAAACGTTTCCCATTCCAACGAGGGCTTTGTAACCAATCAGAA
AACTGAGGGAACCTTCGCTCTCTCTGTGTAGCATCGCAGCACGCCCGGTA
TTTAGCTCGACCAACTCGAACCCCGAATTGATTCCCAACACCGCGAAATC
GGCGCGCGCGTGTCCGTGTCTGCGATGTCCGTCTGCCTGACGATCTCGAC
CTTCGCCAGGTGGTGATTGCGATGCTCATCACCCTCGCGGGACTCCGCGT
TCTGGCCGGTCTTCGGCCTTACCAGAGGGAAGACGAGAACAACCTGGCCG
AGGCTTCGCTCTGGGTGACATTCCTGACGCTGTGAGTATATTTTGTGGTG
GTCAAGTCTCGAACCCGTCGCACGTTTTTTCGAGCGAACGCTGCGCTGCC
GAGTCTCCGCCCATAGTGCGTTGTTGCCTTGGAGCTTTGCACCCGCTTGC
AGTCTACCTACCCAATCGTTGCCGTGGGCCTTTTTTTTTGTCACGCACGA
TCTGCGACCTCGACGGACTTTGGTGCCCACGGTCCGGCCTTGATCGAGGC
GCGGCGCAAAAGACAACCACTTTTTTTTTTCAATCAAAAATGGGACGTAT
TTTTTGTCACTCCTTTACCGCCGCCCCCCCGTAGAATACGATAGCTCATT
CTAGCCAACACCGCAACGTAGTTCTAGCCAACACCGGAACGTAGTAGGCT
GTGTGGGAGAGATTGCTTGATGTCCCCCCACCACAAATGCGCATGCTAAT
AGATTATCCGCACTACACTTTTTTTGGAGCGGCGGCTTGCGTGCTGAAGC
GATGACGTTTGCTGGCGCTTGATCCACACACATGACCCCAATATGCGTTT
ATTATTTATTTTGTTGCTTTTAAGTTGAATACGTCGCTCCCTGTTGTCCC
CTCCCTCCCCCCCGTTGCGACTCGAGCCTCGGAGCGCGACATCGCTCGCT
CGCGGCGTCCTGTATCGGTCGCTTCGCGCTGTGCTGACCCTCTGGTGTCC
CGCGGTTGCATTACTGCTGGTGCTTCCGCCGCTGGTGCTGCAGCAGCTGC
TGAAATGCTGTCACTGCTGCTCTTGCTTGCGCTGTTGTTCGCGTTCTGAT
GCCCAAATCAAGGTTTGCGGGGCTTTTGATCAAGGCCGACGTCGCCGATG
AGGATGGGTGAGACAGACGGGGAGAGATTGTGTACCATGGTTGTGCTCTT
TGTCCGTTTTATCGTGGGCTGGCTAGCTGCATCTGTCGTAAACTGTACAT
ATGTGTGCCGTTCATGTTAATTTCTGGATGTTGTCCCAGTCTTTCACCTT
TCGGTATGTTTTTTGGGCGTATCAGCTGAGGTCACACAAGACAGAGCAGG
GCAAAACGGGAATGGTGTTGGTGCTTTTATTTCTCAGCTTTTTCTTGCTA
CAGCAGTGCTTGTCTCTAGCGTGTGTAGCGACGTTATATTCAGCGGTTGC
TATCCCTCGCCGACCGCGATAATCGAGCTTTATACTCACCAGGTTATCGC
CATCCGTATTTGTTCGGGCGTACTGCTGTGAGAAAAACAAAAGTCCCAAC
TTTTTTTGTGTCTGTGTGCCGAAGGTTGCAAGGTTGAGGATACCAACTGG
GCGCGTCTAGCTGCCTGTGCCCCTTAGTACATGGCACCTCCGCCATGACT
GAGCTGCTAGTAAGCTGCTGGAAGACAGCACCCGTCGACGCTTCAGCACG
CCTTTTTTTTACGCGAACCCGCATGTTGTGTGGATCATATGACTCTTGCT
TGCTGCGACGCACCGATACACCATGTGCACCCTTTCGTTTTGCTTTCGTG
GCTTTCTTCCTCCGTTGCAGGTACGACACCGTGGCGTTGGGAGTTATCCT
ATCGATCATGAACGCGGCCTTGTTTGCATTGGCTGCATTCCAGGTGAGGA
GTAGAAACCCACGTGGGGCTGTTACAAGCGTTCCGCGGATGCGGGTTCTG
GAGGTTATATTTCGTTGATGCTACACTAAAGTTTTGTTTTCATCGGTCGG
TCGCGATTTTTAGTCGGTTCTACAGCGTCGCTTTTCGAAGACTGAAATCG
AGGAGGACAGTTTCTCGTTTGGTGAACCATGTGTTGCGTTTTTTTTTGCC
CCTCAATACTCTCCCGCGGTTGACTCTAGCGAAGAAGCGCGGCAAAGAGA
TGTATCGATCGATCCGCTTGTTGCCGGTCACAGGGCGGCGAGCCGTGTCT
AAGCGGGCTGATGTTGAACGACCCCTTCACGAGAAGACCGTTGACACATG
CCTGGTAGAAAACAACGGTATTCAAACAACACGGTGCGGTGCCCCCCCCC
ATGCCACCGCAAGAGACCACATATGAACGCCGTTGATACATAGAAAACCA
CGACATTCGCATACCACGGTGCTCCCCATCCACCACGTGTGGGCCGTAGA
AAAGCCCCCCCGAACAAAACAGTCAACAAGGACGACGTTTGACGATGAAT
GTGATGTTTTTGCCGGAAGGACGGAAGGACCAGTCAAGTATCTTGCGGGA
ACCAATATCTTATGGGCTCTGCATCTCTGCGTTGCTAGTTTTTACGGACT
TGTCGCGCCTGCCTTTCCTTCGATTTTTTCGCCCGTCGCTGACGTCGCGC
ACATCTTGACGTTCAACCTTCTTAACGCTTTCGGCGAACAATATCCCAGA
TCCTGTGGACTACGAGCCAGTTCTTCAAGGAAAAGTGTGGCGGAGCATTC
GGAATCGACATCTCAAAGAAGTGAGTTTGTTGTCATGACACTGTTTTGAT
TTTTCGTGTTGTTGGTGGGATGTACCTTTGACCTGTTTCGCGGGACGCGT
CTGGCTACGGTGGAGGTACGCGGTACGAAAGAACCCGGCCACCCATGCCG
TTACAGAAAAGGATAGCCTGGCAAATGAGCGAGCGGATGGGATGAAATTG
TGTGGGCGTTTTGGAAGGTACACACCGAATGTTTGACAAGCAATCAAAAC
ACACACACACACGCGTTTGGTATCTCTGGAGAGGGTCACCGTACGCTCAA
GGAGCCGACGGGTCCCGGGACGAAAGTCAGTAAGACCAGAGAGGGAGACA
ACACGCGAGGAAGGACCGCAGAGAACAAGTCTGTCAACCTTTTCAGGCGG
CAGCATTGACACCAGCAGTTTTGAGCAAAATGCAACGCGTGGATATCCGC
CCTCTCCGAGCTCGAAATCCACTCTCGACCGGAGCTGGTGGCTCGCTTGG
CTATCGCCCGTACATCCTACCTACTTCAGTAGGCCCTAAGGAAGAAACGC
AGATCCACTAACAGTCAACACAAAATCGGTTGCCTTTGGTTGCCTGGAGA
ACAACCTACGGTCGCTTTTTCTTTTTTTTTCGCGCACCCCGTCATTCGTT
TAACTGCAAGGTCGACCTAACCCCACTCCCCACAAGTGTGGTTGCTCCCC
ACAAGTGTGGTTGCTCCCCACAAGTGTGGTTGCTCTCGCAACGCTGCTGT
GCTGTACCGAACCGCTTGTACCAATACCACGACAAACTGCATCCGTCACC
CAAGCAGGCAGAGGCCGGACGGGCAAGGGCCCTCTTCCGGCAGGGTCGGC
GAGCAGTACCAGCAACACCTTCAGCAGCAGCAGCAGCGGCAGCAGCAACG
GCAGCAGCAGCACGCGCCGCTATCCGCCTCTCCCGAAGCGCGGACCGCAA
GGGCCGGCCGCCCAGGCAAGTGGAGCGCACACCTTGCGCACAGTTGTAGA
AGTTGCAACCCTTGCTTGTGTCAAGCCGCGTTTGGGATGAGCTGAGCTTA
GAACCACCGAAAAATGAAGGGCTGCATTGTTTGTCCTTGGTAGATAGGTC
GCGTCTTGTTCGGTCGACTTTTTGACGTGTTGAGCGGGAGAGCGAGCGAG
TCTTAGGGAAAAGTTACGTTTGGCCGCCGCCGCCGCCGCCGCCGCCGCCG
CCGCCGCCGCGTACTCGCCGCTGATGCCCCCCTTGAGCTACTATCCGGCA
GAATCCTTGATAGCCTCGCCCGTCCCCCAATCTTCGGTTGGTTTCGAAAC
CGCTCGCTTTGATGTAAAATATATCCAAACGGTGGGGGTTGATGTCCCCC
GCCGCCGCCGCCGCATTTTTTTCTCGCGTTCAACGGTCGGGGTTGATGTC
CCCTCCCCCCCCCCCCCCCTGCCGCATTTTTTTGTCGCACCAGATGTCAG
GCCTTTTGAACAGTCTCCTCGCCACCGCTCGCCGGTGCCGATGAACAACC
CGATCCGCGGAGGCGGGAGGGTACCCCAACAAAGCGGCAAGGCCAACAAC
TACCGCTCCGCTGGCTCCGTGGCCTGA

Coding sequence (CDS) from alignment at chr_28:526835..540061+

>Ec-28_000530.1 ID=Ec-28_000530.1|Name=Ec-28_000530.1|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1998bp|location=Sequence derived from alignment at chr_28:526835..540061+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGGGACGCGCAGGCGTGGCGCTAGCTGGTTGGACGATCCTCTTGTGTTT
TTCCTCCGTCGCAGCCCAGAACGAAAGCTGTACAACCGAGACGTGTGGCG
TGAGCACCTGCGAGGCTGGGAGGGAGCTAGAGGTCTCCCTTGAAGGAACG
AGCTTGGAGATCAGCTGCAACCTTTGCTTGGAAAACTTCTACAAGGCCGA
AGAAAGCGCAGATCCTTGCCTGGCCTGTGGCGATGGATTGGTATCGGAAG
TAGGGGCAGTCGTTTGCACTTTGGAGGCCGGGTTTTGGAGAACCAGCAAC
ACCTCGGACATCGTGTACGAGTGCCCCAACGCGGACGCTTGTGTTGGCGG
AGCCACTGTAGAGACGTACTGCAGCGACGGCTTCAAGGGGCCACTGTGTG
CCGTCTGCGAGAACGACTACTACCCCAGCGGCAGCTACGAGTGCCTGGAG
TGCTCCGGGGGTAACGCTGCATCCTCCATGATCACCATCATCCTCTTCCT
TGCGGCGCTAGCGGTGTTTCTGGTGGTGCTGTCCAAGGCGTCGTCGACGT
TGGAGGAGAAGGCGAGGGAGCACGATGACGACGCCAACGACGCCGCGGCG
AGCAACGTCATGACCGTGGGAACCAACTCCAAAGTGTTCAAGTTCATCAA
GCAGTGGAAGGACACCCTGGTGGTACGGTTCAAGATCCTGGTAACGCACT
TCCAGATCGTCACCACCTTTCCCGTCGTGCTCGACGTCCAGTGGCCGGAG
GCCTTCAACCGATACGCCGACAAGGTTTCTGTTATCAGCCTGGACTTCTG
GGGCCTGCTGAGCCAGAGCTGCTGGTTCCAGCCCGACTTCCTCAAGCAGC
TCGTGTTTACCACGCTGCTGCCGCTCGGTATCGTGGCTGTCCTCATGGCT
CAGTACGCCAAGACCGTCAGAACGCGCAGCACGGAGGCGTCGCGGCGCGC
GGCTTTCGACAACACGGCCGGAGGCGTCTTGCTGACGGGGTTCTTCTTCT
ACATCGTCACGAGCACGCTCATCATGGAGGCGTTCGACTGCCAGGACTTC
GACGACGGATCGAGCTACCTCAAGGCGGACTTCCGCATCAGCTGCGGCAG
CAACAAGTACACCTTTATTTACGTTTACGCAATCATCATGGCCATCATCT
TCCCGGCGGGCATCCCTCTCACCTACCTGGCCGTGCTGTACCTGGGGAAG
GAGCGGATCAACCCCGACCCTGTCCACCCGGAGGTTTCGATCAAGAAGAG
GGAATCCGACGCCACGATCAAGAAGACCAAGTTCCTGTGGGGGACGTACC
GGCCAGCGGTGTACTACTACGAAGTGTGGGAGTGCGTCCGAAAGCTCTTC
CTTACGGGTCTGCTCGTCTACTTCGAGCAGGGAACATCTACGCAGGTGGT
GATTGCGATGCTCATCACCCTCGCGGGACTCCGCGTTCTGGCCGGTCTTC
GGCCTTACCAGAGGGAAGACGAGAACAACCTGGCCGAGGCTTCGCTCTGG
GTGACATTCCTGACGCTGTTTGCGGGGCTTTTGATCAAGGCCGACGTCGC
CGATGAGGATGGGTACGACACCGTGGCGTTGGGAGTTATCCTATCGATCA
TGAACGCGGCCTTGTTTGCATTGGCTGCATTCCAGATCCTGTGGACTACG
AGCCAGTTCTTCAAGGAAAAGTGTGGCGGAGCATTCGGAATCGACATCTC
AAAGAAGCAGAGGCCGGACGGGCAAGGGCCCTCTTCCGGCAGGGTCGGCG
AGCAGTACCAGCAACACCTTCAGCAGCAGCAGCAGCGGCAGCAGCAACGG
CAGCAGCAGCACGCGCCGCTATCCGCCTCTCCCGAAGCGCGGACCGCAAG
GGCCGGCCGCCCAGATGTCAGGCCTTTTGAACAGTCTCCTCGCCACCGCT
CGCCGGTGCCGATGAACAACCCGATCCGCGGAGGCGGGAGGGTACCCCAA
CAAAGCGGCAAGGCCAACAACTACCGCTCCGCTGGCTCCGTGGCCTGA

Synonyms

The feature 'Ec-28_000530.1' has the following synonyms


Synonym
Esi0098_0008
Esi_0098_0008