Ec-28_000500.2 (mRNA) Ectocarpus species7 Ec32 male_plus_femaleSDR

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	Ec-28_000500.2
Unique Name	Ec-28_000500.2
Type	mRNA
Organism	Ectocarpus species7 Ec32 male_plus_femaleSDR (Ectocarpus species7 Ec32 male_plus_femaleSDR)
Sequence length	509

Homology

[Close]

BLAST of Ec-28_000500.2 vs. uniprot
Match: D7G9D4_ECTSI (Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D4_ECTSI)

HSP 1 Score: 1007 bits (2603), Expect = 0.000e+0
Identity = 508/511 (99.41%), Postives = 508/511 (99.41%), Query Frame = 3

Query:  201 MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVE---DDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR 1724
            MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVE   DDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR
Sbjct:    1 MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR 511

[Close]

BLAST of Ec-28_000500.2 vs. uniprot
Match: D8LFB3_ECTSI (Mannuronan C-5 epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB3_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 4.700e-19
Identity = 77/278 (27.70%), Postives = 129/278 (46.40%), Query Frame = 3

Query:  573 VVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPET-SDISTPPQNMLLLHSAT-----ELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEG-----NPWDNPPTFWTAFIEASRNIPTVE--SCGDGGLKIIAP--LLGN--DDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAA-VRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPL-NEICGGFFFGAFN-ILLAIEDMPGMQSLYLKTQKTFLQPTVVFA---PEVQ 1337
            V FN G   D  YF+FS    V+ YEN+++ ++ +G+P T S +  P Q+ L +H+ +        E   L++  V +A C GWG +Y+T D  D G     NPW+    +W   +EA +  PT+   SC    + ++ P  L G   +DA  + +            + V ++      G+ T+  A  +RDAGA+VLCY + + Y +    + E+           E+CGG +   ++   L+ E    +  LY+  Q    +  +V     P+VQ
Sbjct:  179 VTFNPGGGVDPAYFAFSGNPTVMSYENFYRVMKNVGMPRTPSSVLDPSQHALAVHTTSPDLDGNTEETRALVEAIVQEAACSGWGKIYLTSDSQDPGSDDGGNPWNVLTNYWDTLVEAVKAYPTLPPPSCSGPEMALMVPVWLAGEALEDAVDDVLGVVTKSNFLEGGVTVVLDAR---DGDGTNPTATQLRDAGARVLCYFDFNSYTDVYDLIGELTSADPPAAFATEVCGGLYVDNYSEFTLSAEQ--NIYDLYITVQNVIPRGMLVIDYEDPDVQ 451

[Close]

BLAST of Ec-28_000500.2 vs. uniprot
Match: A0A517XLQ9_9BACT (Spherulation-specific family 4 n=1 Tax=Urbifossiella limnaea TaxID=2528023 RepID=A0A517XLQ9_9BACT)

HSP 1 Score: 75.1 bits (183), Expect = 4.950e-11
Identity = 72/259 (27.80%), Postives = 105/259 (40.54%), Query Frame = 3

Query:  228 VAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSV-------------------------EEEITAY----------QSEARVVFNTGQAADEQYFSFSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKG--WGTVYVTDDLFDEGNPWDNPPTFWTAFIEA 893
            V   G+    V+Q  P    ++P Y  P    G     D +W  LA+ A  G  +  I+NPASGPG+VTD +Y  VID V+ AG   + YV+T+Y  +    V                           E+ AY            +  ++ N G   D  YF    P  V  +EN   + R+   P  +    P +   L+H+       P+   P  + A  +G  +G V+VTD      NPWD  PT+W   + A
Sbjct:    9 VLLCGVAAPGVAQNRPT-GLLVPAYFYPA--GGAK---DARWQQLADAAKNGVPLTVIVNPASGPGKVTDPNYTAVIDGVQKAGVTTVGYVSTSYARRPAADVLADVKTWLKLYPTTQGIFLDEQPSGAAEVAAYLELCESIRRLNPKLTILSNPGTVCDAGYFGTGGPDVVCVHENE-GSFRKYARPAKA--YPPGRTAGLVHTT------PQGANPAAEVALARGHGFGMVFVTDARMP--NPWDRLPTYWDDLLTA 250

[Close]

BLAST of Ec-28_000500.2 vs. uniprot
Match: A0A1I2K2G6_9ACTN (Spherulation-specific family 4 n=9 Tax=Streptomyces TaxID=1883 RepID=A0A1I2K2G6_9ACTN)

HSP 1 Score: 58.2 bits (139), Expect = 2.130e-5
Identity = 53/184 (28.80%), Postives = 81/184 (44.02%), Query Frame = 3

Query:  279 MEFVIPLYIAPMFDNGTTVTIDPQWTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYVATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFS--FSPPAEVLGYENYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVT 824
            M  +IPLY+ P  D G        W  L   AA   T   ++NPA+GPG   D ++      ++ AGA++L YV T YG ++T  V E++  ++            AD  +     S PAE+       ++VR+LG   T+ +  P      +H A   A   +L   F      +G  T YV+
Sbjct:    1 MSLLIPLYVHPAEDPG-------AWHQLVTAAAR--TYAVVINPANGPGPSPDPAFTAAAGALRAAGARLLGYVDTDYGARSTAEVAEDVVRHRE--------WYGADGCFLDRVTSDPAELRACRRLVRSVRRLGA--TTVVLNPG-----VHPAPGYARVADLTVTF------EGHWTTYVS 154

The following BLAST results are available for this feature:

BLAST of Ec-28_000500.2 vs. uniprot

BLAST of Ec-28_000500.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7G9D4_ECTSI	0.000e+0	99.41	Spherulin 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
D8LFB3_ECTSI	4.700e-19	27.70	Mannuronan C-5 epimerase n=1 Tax=Ectocarpus silicu...	[more]
A0A517XLQ9_9BACT	4.950e-11	27.80	Spherulation-specific family 4 n=1 Tax=Urbifossiel...	[more]
A0A1I2K2G6_9ACTN	2.130e-5	28.80	Spherulation-specific family 4 n=9 Tax=Streptomyce...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr_28	contig	chr_28:503465..516088 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species7 Ec32 male_plus_femaleSDR	2016-10-08

Properties


Property Name	Value
Taxonomic scope	Bacteria
Seed ortholog score	84.3
Seed ortholog evalue	1.7e-13
Seed eggNOG ortholog	1000565.METUNv1_03506
Length	3218
Hectar predicted targeting category	signal peptide
Gene id	Ec-28_000500.2
EggNOG free text desc.	Spherulation-specific family 4
EggNOG OGs	1N0H6@1224,2VV7F@28216,COG1122@1,COG1122@2
COG Functional cat.	P
Best tax level	Betaproteobacteria
Best eggNOG OG	NA\|NA\|NA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500	Ec-28_000500	Ectocarpus species7 Ec32 male_plus_femaleSDR	gene	chr_28 503465..516092 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500.2	Ec-28_000500.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	polypeptide	chr_28 503666..514598 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500.2.1	Ec-28_000500.2.1	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 503465..503675 +
Ec-28_000500.2.2	Ec-28_000500.2.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 506944..507066 +
Ec-28_000500.2.3	Ec-28_000500.2.3	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 507726..507877 +
Ec-28_000500.2.4	Ec-28_000500.2.4	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 508736..508813 +
Ec-28_000500.2.5	Ec-28_000500.2.5	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 510100..510200 +
Ec-28_000500.2.6	Ec-28_000500.2.6	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 510540..510639 +
Ec-28_000500.2.7	Ec-28_000500.2.7	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 510852..510929 +
Ec-28_000500.2.8	Ec-28_000500.2.8	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 511302..511434 +
Ec-28_000500.2.9	Ec-28_000500.2.9	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 511945..512078 +
Ec-28_000500.2.10	Ec-28_000500.2.10	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 512454..512636 +
Ec-28_000500.2.11	Ec-28_000500.2.11	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 512868..512967 +
Ec-28_000500.2.12	Ec-28_000500.2.12	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 513375..513448 +
Ec-28_000500.2.13	Ec-28_000500.2.13	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 513780..513950 +
Ec-28_000500.2.14	Ec-28_000500.2.14	Ectocarpus species7 Ec32 male_plus_femaleSDR	exon	chr_28 514509..516088 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500	5UTR:Ec-28_000500.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	five_prime_UTR	chr_28 503465..503665 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500.2	CDS:Ec-28_000500.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	CDS	chr_28 503666..503675 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
Ec-28_000500	3UTR:Ec-28_000500.2	Ectocarpus species7 Ec32 male_plus_femaleSDR	three_prime_UTR	chr_28 514599..516088 +

Sequences

The following sequences are available for this feature:

mRNA sequence
mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at chr_28:503465..516088+
coding sequence from alignment at chr_28:503465..516088+

mRNA sequence

>Ec-28_000500.2 ID=Ec-28_000500.2|Name=Ec-28_000500.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=509bp
MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQ
WTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYV
ATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYE
NYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCK
GWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIA
PLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDA
GAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAI
EDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEDDW
YSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEA
IDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLP
EFKPHDTR*

spliced messenger RNA

>Ec-28_000500.2 ID=Ec-28_000500.2|Name=Ec-28_000500.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=3218bp|location=Sequence derived from alignment at chr_28:503465..516088+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)|Notes=Excludes all bases but those of type(s): exon.  
ATCCAAAACCAATGACACGCCACACCAACAATCGCACAATCCTATCGAAA
AAAAAAATCCACGCATACAACTTGTTTCCTCTCTCGCCCCCTCTCTCTCA
TTCGGCACGAAACACCTTCCACAAATCCCCGCCACCCGCTGCGCTGCGCT
GCTGCTGGCAAAACATCGCACCCACCCCCTTTCCGCTACTCAAGCCCGAA
GATGATGGGAGGGACTACGCTGTTTGCGGTGGCGGCGGCGGGCCTCCTGA
ATGTCGCCGTCTCGCAAGAGTTCCCCGCGATGGAGTTCGTGATCCCACTG
TACATCGCTCCGATGTTCGACAATGGCACCACCGTCACGATCGACCCGCA
GTGGACGGCGCTTGCCGAGACCGCGGCGACGGGTGCGACCGTGTTCGGGA
TCCTCAACCCGGCGAGCGGGCCGGGTGAGGTCACCGACGCCAGCTACCCG
GACGTGATCGATTACGTCAAGGGAGCGGGAGCCAAGATGCTGTGCTACGT
GGCGACGACGTACGGCAACAAGACCACTGGCTCTGTGGAGGAGGAGATCA
CGGCCTACCAAAGCGAAGCTCGCGTCGTCTTCAACACCGGCCAGGCGGCA
GACGAGCAGTACTTTTCCTTCTCGCCCCCGGCTGAGGTCCTGGGTTACGA
GAACTACTTCAAGGCCGTGAGGCAGCTCGGAGTGCCGGAAACCAGCGACA
TTTCCACGCCGCCCCAAAACATGCTTCTCCTGCACAGCGCCACCGAGCTG
GCCGAGAAGCCTGAGCTGATCCAACCCTTCGTGGACAAGGCCTACTGCAA
GGGCTGGGGCACGGTGTACGTGACTGACGACCTCTTCGACGAGGGCAACC
CTTGGGACAACCCGCCGACCTTCTGGACAGCCTTTATCGAAGCCTCGAGG
AACATCCCCACCGTGGAGTCCTGCGGCGACGGCGGCCTCAAGATCATCGC
CCCCCTCCTTGGCAACGACGACGCCGACACGGAGGCCATCATGGCGACCG
CTGACCCGGGGGACTACGGCGACAGGATCATGGTCGCTATGAACGTCGAG
ATCACCGAGACCGGCGAGTCTACCGACAGGGCTGCCGCGGTCAGGGACGC
CGGGGCGAAGGTGCTCTGCTACATCGAGGCCGACAAGTACGGCAACGACC
TGGCCACCCTCGAGGAGGTCGTGGAGACGTATACCTTCTTCCCCCTCAAC
GAGATCTGCGGCGGGTTTTTCTTCGGGGCCTTCAACATCCTTCTGGCCAT
CGAGGACATGCCCGGCATGCAGTCCCTCTACCTCAAGACCCAGAAAACCT
TCCTCCAGCCGACCGTGGTGTTCGCACCCGAGGTCCAGGACTACTCGGAC
GGCTTCGAGTCGAGCTACAGCTTCAGCTACGACTTCGTGGAAGATGACTG
GTACAGCACGAACAACTGGGACAGCACCACCAACTTCGAGCTCCCGTGGG
AAGACGTTATGACCGAGACTGACCTCGTTGCGCTGGCGGAGTCCCTCACC
GTGGGGCTGGGTGACGGCGCCACGGCCGGCGAGATCGTGGTCGCGGAGGC
CATAGACGGCGGCTCGGTCATCCCCGAGGCCCCCGAGCCCAACGAGAGCA
CCGCTGCCCTCGTCACCGGCTACGCCGGGGCCCCGGAGAATGGCGACAGG
GAGAGAGAGAGACGGCCGGCCGGCCGCCGGCCGTCAGAGCGTTGGCTACC
GGAATTCAAACCGCACGACACTCGTTAAGGTTAAGGAGAGCGTGTGACTG
CTACGACCCGAATACAAGCCACACGAAACTTGGGGAAGGAATCGAGTGTT
TCGAGTGTTTGGTTTGCCCTTTCCTTTCCCTCTGCCAGATAGAAGCGTCG
TCCCCTTAATACGCGTTTTGTTCGGTGTTGTTTTTGTTTTTTTTATGTTC
GGAACTTCAAATCCGTGACGAGGCACAAAATTCAGTGGTGTAGAAATCCT
CGCGTTGTGTGTGCGTGTGCGTGTTTTTTTTAGGGGGGTCATTCGCTTGT
TTCCTGGATTTGCTGGGAGTCCTAATCCGTGTAAGGGTGGTGGCGGCGGG
GCACGCGGTTGGATAGATGGGCAGACTCACTTTTGCGTACGCACCACGAC
CCATTTTGTCCGTGTCCTGCCCGGTGCGCGCGAAATTATCTTGAGCCTGT
CCTTCGATGGTTTCTTGAAACATTTTTGTCCATCGATGACTTCTTCTTGT
GTGTGAGTGGCGTTGTTGTGCATGCGGTACACAGATGCACCACAAAAACT
AGCGTCTGTTTGTTTTCGGAGGGGCTGGAGGCAATGGGGGAAAAAAATGG
TCTAGGTTGTAGACTAGATCGATTGCTCTCGCACGATGAGTGCTGATCGT
TGCAGATGTGCATGTAGTCGTGTTGTTTGTTGCCTTCTCTCCCTCTCTCT
CTTGAGAAGGAGAGGAGAGAAGGCAAAAAGAAACACCATGGCCGAGAACA
ACGGAAACGTTAAGGTAGAAGTGGTGGTTGTCTTGTCTTTGCACCCCGAG
TACGGTTTTGGTTCACGGCTAACGCTTTTCCCATTTCGCGAGGTCAGGTC
AGGTCAGGTGTTGAGGGGTAATAACCTCTTGGCACATGAGAAACCTACCA
GCGCGTTTAGTGTTCGGTGGTGTAGTACTGTAATACTTGCTTCGTCTGTT
GCTGGTGCGAAACCCTTACAATGGTGAATTATTTTGTATTAACGTGTTTT
TCGTACGCCGGATGACGTTCCCATTCGGGGGGGCGGGGGGGGGGGGGGGG
CGTAAGGGCCGAGACTCCGGAGTGCCCCGTGGGTTGGATTTTACCCCAGG
GTCTGTACCCGTTCGAGTAGTTCGAGCTGCCTGGTACTATCTACCACGCT
TAACGGTAACGTGCTTGCTTGTGGCTGCGCAAAGAGCTGCCTTCGCAGCT
TTGCACCGGGTGGGTGTCGTTGCGACGCGCACGGCGCGCGGTGCTGCTGC
ACTGTGACGGGTGGCTTGCCTTTTGCTTGCTATTGTTTTCGTGGCTCCAA
TTCGAGGAGACCACCGTCCCTGTCCCAACCCTTTACGTTTCTTAATTAAG
TTGCTGTAGCATGTGTGTGTTCTTCGACGACTTGCAGCAAGAAGAGTCGA
GGGTAGAGGGTAGAGGATATACTAATGATACCCTATCGATTTTTGGATAT
TCGGCCGCTGAGCCTTTTGCCGTTTGCGGTGAAGACGCAAAGAGAAAAGG
CACGCGCAGTTACTGTTA

protein sequence of Ec-28_000500.2

>Ec-28_000500.2 ID=Ec-28_000500.2|Name=Ec-28_000500.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=polypeptide|length=509bp
MMGGTTLFAVAAAGLLNVAVSQEFPAMEFVIPLYIAPMFDNGTTVTIDPQ
WTALAETAATGATVFGILNPASGPGEVTDASYPDVIDYVKGAGAKMLCYV
ATTYGNKTTGSVEEEITAYQSEARVVFNTGQAADEQYFSFSPPAEVLGYE
NYFKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCK
GWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIA
PLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDA
GAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAI
EDMPGMQSLYLKTQKTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEDDW
YSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEA
IDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLP
EFKPHDTR*

mRNA from alignment at chr_28:503465..516088+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Ec-28_000500.2 ID=Ec-28_000500.2|Name=Ec-28_000500.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=mRNA|length=12624bp|location=Sequence derived from alignment at chr_28:503465..516088+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATCCAAAACCAATGACACGCCACACCAACAATCGCACAATCCTATCGAAA
AAAAAAATCCACGCATACAACTTGTTTCCTCTCTCGCCCCCTCTCTCTCA
TTCGGCACGAAACACCTTCCACAAATCCCCGCCACCCGCTGCGCTGCGCT
GCTGCTGGCAAAACATCGCACCCACCCCCTTTCCGCTACTCAAGCCCGAA
GATGATGGGAGGTGAGTGAGGGGGACAAGCTCTCGCGGGATGTGGCGGTC
GGCATTTGGTTGGTAATGGTCGTCTAGATAGACCACCACACAGATTTCTT
GACCAATCAAGAAATCGGGAGCTTCACGTATGTTGTCGGTATGCACGCAT
ACATACGCGATGCTGATCCCGTCGGAGACAACGGCGGGCAAAGCCTATCA
TCTATCGGCCATTGCGCAAGAGGCAATGCAGCAGGGGTGAACCGGAAACC
ATCCCGTTTGCATACCTTCTGGTGAGCACACGGAGCAAAAACATGTATAG
GTGACACACTGCACCCGCCCGGCTGCTTGTACACACCAGATTTTGTAAGT
TGACACGAAGCCTCTTGCGATCTCTGGTGGCGGGGAAACTTGGTCAAACA
ATGGTATCCATACAGTTTAATGTGAAGAAAAACAACAACAACAACAACAA
ATACATCCCACACCCCAGGCAGGCAGGGGGTTATCTCTAGACCCCGCGCT
GGAGGCCGCCTATGTAGACCGCGGGGCGGCCGCCAGAGCTCTAGAGTCGT
GAGCGCAGCATCACAGACAGCAGTTAGTTGCACCTGGGATGCGCTCATCA
TTTTGCACACAAGCATCAAAGCCAAGCATTTTTTGGACGCGAACAAATAA
AATGACCGGCGACCCGAGAACATTTTACTGTACGACAGGGTTCTCTTCTC
CCCTCTTCCCAGCTGTCGATCGGATCGCAACTTGTTACCCACCCGTTGGC
CGATTGAGTGACCTCGGGCCGTGCCGGCAAACTGCTGCAACTATCAGCCT
GTTGCCCCCCTTGGTCGCACACACTCATGGCGTGAAGTGCGCTCTCACGC
TTGAGCGGACGGGAATTGTGTGGGCCTCTCTCTCCGGAGAGATAAAGTAT
GCCGAAGGACCTGTCTCAATGTATGTATGTACATGTATGCGCCTCGATGT
ACACCTGCTCTAAACCAACTGCCGGAGAGGCTTCACTGCTTCACTAAGTA
ATCGCCGTGAAACTATTTGCTGTTCCAGCCGTCGAGCGGTAGATACGTTG
GACAGGTTGCGATCTCGGAAGGCTTCCCCTCCTTTTGAGCGTGCTCAAGG
CGTGCTCGCCAAGAAGTTATTGCATAGATAAATAGCCGGGGGGAACTTTG
GATGAAAGAACTCTCTGGCGACAGCTGTGGATCTTTGTGCCATATGTCTT
GCGTGCCGAATGTGCAAACAGATGGATGGGCACATGGGCACATTCGTGAC
CAGGCCGGACGAACAATCCATCCAGCAAAGGAACGGTTTCTCGTCACGTG
GTTGCCCACTAGTCTAGACTATAGACATTATCGTCACCCCTGTTCTTAAA
TAATACTTCGAACGCACGCATAGATAGGGCCGCGACAAGGCGAAAGAAGC
AGTGCACTCCTCCTCCGGCCTGTTTGCCTCGCACAACTATGTAGTCTACG
CCCGCAAAACTAACGAGAGTGCCAATACTACTCTCCGCCACTCGGTCTAC
GCTTTGGATACATAAATACGAGACATAATTCGTTCTCATTTTTATTCCTG
TTGGTGTTGTTGGTGTTGATGGTGGTGGTGTTGTCGCCGCATCCATTGTT
TTTGCGCAGGTCCTTGTGTACCCTTCGTTGCTGTCGCTCCCTCTTGCGCA
CAATACTTGCGCACAACAACACTACACACAGGAAGGGGTTGATACAGGTC
TGGATGATGTCGAGTACATGTCATGTATCGGCCTGCTGTTGTTTATTTTT
TGCTCCAGAACATCAACATCGGGGTATCTGTAGTTGGCCCGACCGGGGTT
GATCCGTATCCATCCGTCGTGTGGTGATCCACTCACAATAATGACTGTAG
GTTTTGTGTGTCTATCGTATCCGAATACTGACTGACTGGTTTGGCTTTAC
TGGCGGCGAGGGATGGTTGTACATTTATCACGAGAAATTAGAGAAATTAA
CTCATCAAAGTGTACCGCGACAGGAAAAGAAAGAAACAAGAAAATAATTT
CCCTCCCTCCAGGTGCCCATCTTCCTTCCTGCGTCACCCCGGCTGGTGTC
TGAAAATAATAAATAAGTAAATAATACCGGATCCCGCGCAACAAAATATA
TCTACGCCAGCAGCCGGACTAACGGGACGACAGAAACACCACCTTGTTTG
ATTCTGTCCTCGTCCAACACCCGATTTTTCGTATTGGATGATGATGGCTT
TGCCAACAACCCATTCAAGAGTAACGGAGTCCACGAAGAAGACAGGCTGA
CATCTCTTATTATTCCATTTGGAAACAATGGGCTGGACGTCGTCGAGGTC
TCGCCTGAATCCGGGGGTGTTCGCGAATGTTGCTGGTGGCAACCTCACCA
GAATTTTCTCGCCGGGGGGGTCGGGCGCGTGCGGCACGTTGCCCTGCTGA
AACGCAATGAATGTTCTCCAGGGCAGCGCAATCAATTAGCAGAGAGAATA
GGGCAGCCGACCGAACAGAAGCAACAGTAGTTCTGTGGCCGCGCCAAGAG
ATGATGGTTATTTACTTGCTAAATCGATCCTCGATTCAAATGTCAGTATA
TTTCACGGTAGCAACCTCCCACCAACGGGTGATTTCGGGCTTTTAGCCTT
CGATTCACCCGTGAATTTGTTTTATATTGTGCGTCGTGGTGCCCACAATC
GGGCTTATGGCACAGGGATGCGCAATAAATGCAAGAGAGAACAGCACGGG
TTGTTATTTGTTGCATTTCCGCACCGGCCGGTGTCCTGGGTATTACCGCA
CGCACCCTGTGCCATATCAACGATAGTCTATATAACCTGTGTAGGATGTC
AAGTTTCATACTCCCCAAAGGTACCCGTATAGACTACCCTCCGGGCCACG
TATTGAACTGTAGACTATGTCCCGAACGGCTGGGAGATAACAATTGAGGC
GCAATCCTTCCATGTTTAGACATGGTGCCGTCGAGGTACGCGTAGAAATG
AATCATCAATCGATGATTTTTTATAGAACGATCGCAACCAACCCCGTGCT
ACAACATTGTCACACGCACAAACAACCGCTGTATGCGATGTATCGTATTC
AACCTTTCACTCGCTCGCGTCGTTCGGTGATACTCCGAAGGTTTTTCCCT
CCATCGCGGCTGACTGTGAGATAGATGCGACTCCCGTTGGGGCTGCTTTG
GTACAGACACCACAAACAACAATGATGTGACGCGATACGGTTATCTCCTC
GCAAACAGAATAATAGTCTACAGCAGTCAACAAATTTCTTGATCGCTCTT
CTGCTGTTCGTTGCTGTTTGTCTCAGCAGGGACTACGCTGTTTGCGGTGG
CGGCGGCGGGCCTCCTGAATGTCGCCGTCTCGCAAGAGTTCCCCGCGATG
GAGTTCGTGATCCCACTGTACATCGCTCCGATGTTCGACAATGGCACCAC
CGGTGAGTGCCCGATATGCCTCTAAGGGTAAGAATGATTTTTTTGCCGTG
CGACTTTTCGACGTCAATCTCTTGGTTCGCCAGCGAGCAGCGCTCCTTGC
AAGCATTAGTAGGAAGAAGTGCATCACGTTGTCGTACCACCTGAGGAATG
TTGTCGCCGGTGGTAACGCCCACATCATCAGTCGAGAATCAAGGTGGACG
TTGTTGGTTGCAGGAGCCACCAAGCAAGGCCCCTCCCCGCTCTCCCCCTC
CCTCCGTCTGTACCTTGAAACGATCGACAAAGAATAATAATGTCCTCCGC
GTTTAATTTTTTTACAACACTAATTCTTGAAGGACTTTTTTGACCGTTCA
AGATAATAACTGAAATATCGAAGGCAGTCAATGTATGTCTTCGCAGTGAG
AGGGGGAGAAACAAACCTGCCACAGAAAAAGCTGCCGCACTTGAGAACTT
GGCAGTTGAGAAAATGAAGAACCCCAGCGTCTGCCAAAACTAGAGGTTCC
TACGCTAAGTGCGGGCGTTTCTCCGTTTTTCCTATGCTAAGTGCGGGCGT
TTCTCCGTTTTTCATATGCTAAGTTCGGGCGAGTTCTCCGTTTTTCATCA
ACTCTTCTTGCTTTCCGTCTTTCTTTCTCTTCTCAATCAACAATCTGTTC
GGTCGGTTCAGTCACGATCGACCCGCAGTGGACGGCGCTTGCCGAGACCG
CGGCGACGGGTGCGACCGTGTTCGGGATCCTCAACCCGGCGAGCGGGCCG
GGTGAGGTCACCGACGCCAGCTACCCGGACGTGATCGATTACGTCAAGGG
AGCGGGAGCCAAGGTGATGATGGAGACATGATGTGATGACCTGCAAGTTA
CGGTAGTTCGTGGTGTGGTTGTGATGATGCAGTTGTGATGACCTGAAAAA
ACGTGACAGCAAGTAAGTCAGTGCTTGGTGTGTTTCTTTGTTCGGAATAT
GATGACGTAAAATGACAAAAATTTGGACGATATTGTGTGAAGCGGCATAC
GGAAGAAGGCGCGGGGTCACGCGAAGGTTTCGGTTGCTGTGTACGTCGAT
GGAATACGTTTCGATTTTCGATATATATCAACCACCGTGCTCTCAGACGC
AATAGGCAGAACGCAGACGAGTTGGGCTGGGCCCCTCTTGTCGCTGTCGG
GTGTGCCAGCATGACGTGTCTTCGTGCCAACGATACTTGGAGAGAACGAG
GGGGGGGGGGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNGCGCCAGGCATCCTTGGAGTGAACGAGGGGGGGGGGGG
TTGGTCGGATAGAGTGCCACCCACCCCCGCATAGCCCACATGAACGGTAA
ATCGACAGCGTGAAGCTCATGTTGGTGCATCGGGCTACTTAGCTGTGGCT
GGCGGTAGGGCATGGTTTACTTTATACACCAAACACCCTGCCGGGCCCTT
CGCTTGAACGCGTGCTGCGCATGGAGACGAACCGGCCGGTCTCGCGGGGC
GTCTTGGCAAGAAACACGGCATGACTCAGTTTTTGATTGAGTCACCCACG
AGTGTTCCGCCACCCCTGACCCCACCCCGCTTCTTGTACTGTTGCAACCA
CAACAACCTCGTGTGTAATAGATGCTGTGCTACGTGGCGACGACGTACGG
CAACAAGACCACTGGCTCTGTGGAGGAGGAGATCACGGCCTACCAAAGCG
TGAGAGAGGGACCCCGGGGGCTGGTCGTCGTCGTTACACGTTCGGTCGCC
GTTGAATCGAATCTTTTGTCGGTTGTTGCTCGCTCTGCACGGGATGAGAA
ATTAGTCTTGAGCTACCAAAGAGTACCGTTGATGGTATCGTGAAGGAATT
CTTGTCGATTTTGAGAGTGGGCCTAATTACCCCGCTGCCCTGTGGGGCGC
CGAGCTTCTGCCTGACTGAAAAGGTATTTCCTCTAGCGTCCGTAGAGCAT
GCATTCCCCCGTCTCTCGCCGCGTGGGTGCACGGCCCTCCCGGACCGCCT
TCGCAAGAAATTCAGGTTGGGGGTACGCAGACCCTATCCCTAGCCCTTAC
CCCAACTTCCTCGATTGCATACTACATCCAACATGTTTACGTAATCGAAT
CCCTGGAAAAGGCTACGGCCCGTCCCTAACTCCCCGACAACCTCTGCTGT
GATCGTTTTATTCGTTCGTGCCCTCGCGCCGTATGCCCCCCCCCCCCCTC
CTTCGTTCCAAAGCTGCTATTATAACTTTACCCCGGGGCCTGCGACGGCA
TCTTCTTCCACGAAGCCCCCCACCTGCTCACCGATGCGGGCAACCTCCAG
ATCTACACGGGCCACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCAAAGAGAAAGAAAAAG
AAAAGGTACCTTGAGGTAGCCCACCCGCCCACCGCCCCAGGTACCCCCTT
GAAAGGGGGGGTCACGATTGTTTTTTTGCCATTTTTTGTCGCGAAACGCA
GAGCATTACTGCACGCCTTCCTATTAGACCATCGGCCGAAAGGCGGGGGG
GGGGGGAAATACTCGTGTTTCGCAGGCCTTCGGGTAGGACGGGATTCCGG
AGGCACGCTCCTCGAGAGGCCGGCCTGGCTGGTGGTATTAAACCGGGTAG
TTCCGTCTGTTTCTTCGCCGAGTTCTTAACCCCCCGCCCACCCCCCACCC
CCCATCTCTCTCCCGCGGTGCCTTGCACCTTGCAGGAAGCTCGCGTCGTC
TTCAACACCGGCCAGGCGGCAGACGAGCAGTACTTTTCCTTCTCGCCCCC
GGCTGAGGTCCTGGGTTACGAGAACTACTTCAAGGCGTGAGTTCGCGGGG
TCCATTCCCACGCTTTCACCGGGGGGGAGGGGAGGGGGGGGGGGGCGACT
ACTACCGTCGTCGTTCGTTTTCGCTTGCCCACTGGGCGTTTGTTGCGGCC
CGTCTCTTGCTTCTTGTTGCCGTGGTTTGTTTTGTTTTATCTGGCGATGT
GCGGTGCTGTACGGTAGCTGCTAGAAGCGCGTCTACTTGCGGCAGGCTGC
TCTACGAGCCCCTCACTTGCGCCTTTGTGTTGGCAAAAAATTGTTTTTTT
TCATACCAGCTCGTGCGCCGTGTTTCGAAAACTCTGACCGTGCATGGTCG
TGTTGGGTGTATTTTTTTTTTGCAGCGTGAGGCAGCTCGGAGTGCCGGAA
ACCAGCGACATTTCCACGCCGCCCCAAAACATGCTTCTCCTGCACAGCGC
CACCGAGCTGGCCGAGAAGCCTGAGGTACGTCTGCATATCACACCCATCT
AAAGGTCGTTGTAAATACGTTTGTTTCCTTCCCATTCTCTTCGTGTCTCA
TCACATCTGGTAAGTGTACGGCAACGTGTATGCGTTTCCTGCCTCCTCTC
TTTTGGTGTCCCATCACAACCTCCCCGCGCTTTCCCGTCGCCACCACCTC
CTTGCTCGTTCTCTCTCCGGCCGTCAAACCACGACAGCTGATCCAACCCT
TCGTGGACAAGGCCTACTGCAAGGGCTGGGGCACGGTGTACGTGACTGAC
GACCTCTTCGACGAGGTGCGTTTTGTTTTTTTGTATACTTGGTAGTCTTT
GCTGTTCTTTTGTCGACGCCTGTTGTACTCGTCGACGCCGCCATCGTCTT
CGTCGTCGCTGTATTAGTCACGGTTCTTACCGTTGTCGTTATCGTTCCTC
TCGTCGGCCGTGTACGCAAGGGTGTCTGTAGTCCCCAGCCCTTGCATCAA
AACCCGCCGCCCGTCCGTCTGTCCCGTGAGATTGTCCGACTCCCGGCCTC
GTGTCGTCTCCTTTGGCTGTCTTTGCCGGCTGCCCAGGGTGTTTGTCCCC
AGCCCAACTTTACAACCCGGACGACTGACCCGCTACAATGAAATAACTTT
TCGATTTTCCGTGCCGTGTAACTCCTCTCCTCTACAGGGCAACCCTTGGG
ACAACCCGCCGACCTTCTGGACAGCCTTTATCGAAGCCTCGAGGAACATC
CCCACCGTGGAGTCCTGCGGCGACGGCGGCCTCAAGATCATCGCCCCCCT
CCTTGGCAACGACGACGCCGGTGAGTGGTAACACGGCAACTTACCTGTAA
ACGTTTTTTTGCTCTCATTTGTTTCAAGAAAATGTCGGGGGGAAATATCA
GAGCATCCAAAGCCGCCGGTGAGTGATACCACGCCAAGTTACCTTGGGAC
TTCGCTCGGCGAAGCTTATAAAGAGTTTGTCTTCCGTTTGTTTGTTTGTT
TTCGCCCCGCGAAGACTGCCGTATTGTTCGCAAAAGAAGATAAAAACTTT
AGAATTATCACCGGTAGGTCTCTTCGTACCGCCGTCGATGATACCATATC
ATTGAAAGACACGGCGTATACACACCCGAGGTCCTTTTCATTTCTGCTTC
TCGTGTGTTTTGTGGTAAAAGGGGTGTTTTTATTGTACCGTGTTCGGGGC
GCAGGCCAACGTATTTAGGTGCGCAAATTCTCCACATCCACACGCGATTT
CTGCCGGCGAAAACCAACGTCGCTCTCGTCCCCCTGTCGTGTGCTGCTCC
CATTTTTTTTGTGTTCTCTCTTTTTGGCAGACACGGAGGCCATCATGGCG
ACCGCTGACCCGGGGGACTACGGCGACAGGATCATGGTCGCTATGAACGT
CGAGATCACCGAGACCGGCGAGTCTACCGACAGGGCTGCCGCGGTCAGGG
ACGCCGGGGCGAAGGTACAGAGCATACTTCCGTGTATGGGCACATACAGA
CTCAAGTAGAGGCCAGCATCCAGGCGGTTTTGCCCCCCACTCAAATGCAA
GGACATGATCCCCTGCGGCTGCGGTATTATTTCCTTGAACGGGGAGTCGT
TCCGTGGCGTTGGTACAGTGTATCCCGGACTCTCATTCGTGGGTAGAGAT
GAATATGTTGTGAGGTTTTCGTACTTCCATGATATGATATCTATAGTAGG
GTGTGTGTGTCGTCGACTCGAACGGAACGCACACCGAGAAAACCCCTCTG
GGGCCGGCCGTATCGCCCTCATGCTGTCCGTCGCCGCCCTCCCCTGTTGC
TCGCGCTGTTGTTGTCTGTACGCTCTTCTTCCCCTTAAGGTGCTCTGCTA
CATCGAGGCCGACAAGTACGGCAACGACCTGGCCACCCTCGAGGAGGTCG
TGGAGACGTATACCTTCTTCCCCCTCAACGAGATCTGCGGCGGGTTTTTC
TTCGGGGCCTTCAACATCCTTCTGGCCATCGAGGACATGCCCGGCATGCA
GTCCCTCTACCTCAAGACCCAGGTGCACGGGCGTTGTGGGAGGGGGGGCG
GGCGGGGGGGGGGGGACATGCAAACGGACGTATTATGCGGGGGGAAAGCG
GACAATCATGTAGCGTAACCTAGGAGCGTGTAGGGTTAACCCTAAGGAAA
ATGACCTATGTAGGCTTCGCATCACGCTCAGCTGTATTCATAACCACCCC
CCCTTACGATCCGTCTCTCCGGTGTTCGCAACACGGCCATATTCTCGGAG
CAGAAAACCTTCCTCCAGCCGACCGTGGTGTTCGCACCCGAGGTCCAGGA
CTACTCGGACGGCTTCGAGTCGAGCTACAGCTTCAGCTACGACTTCGTGG
AAGGTGTGAGCGCTTCGGCAATCTTGCTTTTTGACTCTCTGCGTTCCCGA
AGAGCGCCTGGCGGACGATGAGTTGAGGCGCGCGCCCCCCTTTTCCAGTG
ACATGCGATAGGATGCTAGCGCTTTCCTGCCGAGGGCTTGATGTACCCCA
ATGACACACGCGCAAATCGTTTCTGCGTGGTGCGCCGCTTTTTTGTATTT
CGGGGGTCCGCGCTCTCGTGTTCTGTTGTCCGTTTTGTTTTTCTGCCACC
CATCATCGTGGATCGGTCTGTACAAATCAGTGCGATCGATGCGAAAGTCT
AACCTAACCTCTGTCCTTTCTTGTTTTCCGCGCGCCCTGCCGCAACCAAC
CCTGTCCGGGACCGGCTGCCGCCTTTTTCTCTGTTCTGCTCGCGGTTCGA
GTCGATGAAGATGACTGGTACAGCACGAACAACTGGGACAGCACCACCAA
CTTCGAGCTCCCGTGGGAAGACGTTATGACCGAGGTGAGGGAGATAGTTC
GGCGGCCTGTATTTTTCCCCACGTAATTGTTTTTTTCCAGAAAGAGTTGA
GAGCATTTTTTTCAACCCAATTTTGTGTGTCGCGACGTACTACATTCGAC
ACAAAACCAAACTTTGCCACCACCACACGAACGTCCGCAGGAAACCTCGT
TACTCCGACGGCATCGCCTTCTTACCTGTTGTTCAACTCCTCAAAACGGT
ACCAAATGTCTCACGTTCGAATTTCATCACCTCTACATGAAGAGACCCCC
AGACACTTACGCTCACGCCCCCCCCCCTCCTTTCTCGACGAAAAAAACTT
CATCGGGCCCGCAAGACTGACCTCGTTGCGCTGGCGGAGTCCCTCACCGT
GGGGCTGGGTGACGGCGCCACGGCCGGCGAGATCGTGGTCGCGGAGGCCA
TAGACGGCGGCTCGGTCATCCCCGAGGCCCCCGAGCCCAACGAGAGCACC
GCTGCCCTCGTCACCGGCTACGCCGGGGCCCCGGAGGTGGGAAGGAACTA
GGAGAAATTTTGGCGCTCGCGACGACGATGTTTTTGACGGCCTTTGCTGT
GCTTTTGCGTTGCTTTGTCATGCTTGATCTTTGATCTATATATGTTTTTT
ATGCCTTTGTCCGACACTTGCTTGCGATTACGATAGTATGTGATTCCTCT
CGGCTGCTGCGAAGCTATTTGGTTTCGTTCTCCGACAAGTGGCGCCTCTT
TGGGCGTACGAAGAACGAGATAATAGAAAACAACGTCCCTCCCCCGAAAG
TGTCACGACGCCCGGGGCGCTTGCCTCCAAGCTCAAACTATTGAACACCC
CCCTTTTCCTTCCCTCACCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTGC
CTGACGCCATTGTTTTTTTCATGCGACCCCACCCCCCCCCCCCGGAGGGA
GGTGTTTCCTTTTTTTATCAAAAAAAGGCCCCCCGTGGCGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCGTCTAAAGTT
GGAACTACCTACAAACTCGCCCGATCCGATCGCATGGACTTAAGAATGGC
GACAGGGAGAGAGAGAGACGGCCGGCCGGCCGCCGGCCGTCAGAGCGTTG
GCTACCGGAATTCAAACCGCACGACACTCGTTAAGGTTAAGGAGAGCGTG
TGACTGCTACGACCCGAATACAAGCCACACGAAACTTGGGGAAGGAATCG
AGTGTTTCGAGTGTTTGGTTTGCCCTTTCCTTTCCCTCTGCCAGATAGAA
GCGTCGTCCCCTTAATACGCGTTTTGTTCGGTGTTGTTTTTGTTTTTTTT
ATGTTCGGAACTTCAAATCCGTGACGAGGCACAAAATTCAGTGGTGTAGA
AATCCTCGCGTTGTGTGTGCGTGTGCGTGTTTTTTTTAGGGGGGTCATTC
GCTTGTTTCCTGGATTTGCTGGGAGTCCTAATCCGTGTAAGGGTGGTGGC
GGCGGGGCACGCGGTTGGATAGATGGGCAGACTCACTTTTGCGTACGCAC
CACGACCCATTTTGTCCGTGTCCTGCCCGGTGCGCGCGAAATTATCTTGA
GCCTGTCCTTCGATGGTTTCTTGAAACATTTTTGTCCATCGATGACTTCT
TCTTGTGTGTGAGTGGCGTTGTTGTGCATGCGGTACACAGATGCACCACA
AAAACTAGCGTCTGTTTGTTTTCGGAGGGGCTGGAGGCAATGGGGGAAAA
AAATGGTCTAGGTTGTAGACTAGATCGATTGCTCTCGCACGATGAGTGCT
GATCGTTGCAGATGTGCATGTAGTCGTGTTGTTTGTTGCCTTCTCTCCCT
CTCTCTCTTGAGAAGGAGAGGAGAGAAGGCAAAAAGAAACACCATGGCCG
AGAACAACGGAAACGTTAAGGTAGAAGTGGTGGTTGTCTTGTCTTTGCAC
CCCGAGTACGGTTTTGGTTCACGGCTAACGCTTTTCCCATTTCGCGAGGT
CAGGTCAGGTCAGGTGTTGAGGGGTAATAACCTCTTGGCACATGAGAAAC
CTACCAGCGCGTTTAGTGTTCGGTGGTGTAGTACTGTAATACTTGCTTCG
TCTGTTGCTGGTGCGAAACCCTTACAATGGTGAATTATTTTGTATTAACG
TGTTTTTCGTACGCCGGATGACGTTCCCATTCGGGGGGGCGGGGGGGGGG
GGGGGGCGTAAGGGCCGAGACTCCGGAGTGCCCCGTGGGTTGGATTTTAC
CCCAGGGTCTGTACCCGTTCGAGTAGTTCGAGCTGCCTGGTACTATCTAC
CACGCTTAACGGTAACGTGCTTGCTTGTGGCTGCGCAAAGAGCTGCCTTC
GCAGCTTTGCACCGGGTGGGTGTCGTTGCGACGCGCACGGCGCGCGGTGC
TGCTGCACTGTGACGGGTGGCTTGCCTTTTGCTTGCTATTGTTTTCGTGG
CTCCAATTCGAGGAGACCACCGTCCCTGTCCCAACCCTTTACGTTTCTTA
ATTAAGTTGCTGTAGCATGTGTGTGTTCTTCGACGACTTGCAGCAAGAAG
AGTCGAGGGTAGAGGGTAGAGGATATACTAATGATACCCTATCGATTTTT
GGATATTCGGCCGCTGAGCCTTTTGCCGTTTGCGGTGAAGACGCAAAGAG
AAAAGGCACGCGCAGTTACTGTTA

Coding sequence (CDS) from alignment at chr_28:503465..516088+

>Ec-28_000500.2 ID=Ec-28_000500.2|Name=Ec-28_000500.2|organism=Ectocarpus species7 Ec32 male_plus_femaleSDR|type=CDS|length=1527bp|location=Sequence derived from alignment at chr_28:503465..516088+ (Ectocarpus species7 Ec32 male_plus_femaleSDR)
ATGATGGGAGGGACTACGCTGTTTGCGGTGGCGGCGGCGGGCCTCCTGAA
TGTCGCCGTCTCGCAAGAGTTCCCCGCGATGGAGTTCGTGATCCCACTGT
ACATCGCTCCGATGTTCGACAATGGCACCACCGTCACGATCGACCCGCAG
TGGACGGCGCTTGCCGAGACCGCGGCGACGGGTGCGACCGTGTTCGGGAT
CCTCAACCCGGCGAGCGGGCCGGGTGAGGTCACCGACGCCAGCTACCCGG
ACGTGATCGATTACGTCAAGGGAGCGGGAGCCAAGATGCTGTGCTACGTG
GCGACGACGTACGGCAACAAGACCACTGGCTCTGTGGAGGAGGAGATCAC
GGCCTACCAAAGCGAAGCTCGCGTCGTCTTCAACACCGGCCAGGCGGCAG
ACGAGCAGTACTTTTCCTTCTCGCCCCCGGCTGAGGTCCTGGGTTACGAG
AACTACTTCAAGGCCGTGAGGCAGCTCGGAGTGCCGGAAACCAGCGACAT
TTCCACGCCGCCCCAAAACATGCTTCTCCTGCACAGCGCCACCGAGCTGG
CCGAGAAGCCTGAGCTGATCCAACCCTTCGTGGACAAGGCCTACTGCAAG
GGCTGGGGCACGGTGTACGTGACTGACGACCTCTTCGACGAGGGCAACCC
TTGGGACAACCCGCCGACCTTCTGGACAGCCTTTATCGAAGCCTCGAGGA
ACATCCCCACCGTGGAGTCCTGCGGCGACGGCGGCCTCAAGATCATCGCC
CCCCTCCTTGGCAACGACGACGCCGACACGGAGGCCATCATGGCGACCGC
TGACCCGGGGGACTACGGCGACAGGATCATGGTCGCTATGAACGTCGAGA
TCACCGAGACCGGCGAGTCTACCGACAGGGCTGCCGCGGTCAGGGACGCC
GGGGCGAAGGTGCTCTGCTACATCGAGGCCGACAAGTACGGCAACGACCT
GGCCACCCTCGAGGAGGTCGTGGAGACGTATACCTTCTTCCCCCTCAACG
AGATCTGCGGCGGGTTTTTCTTCGGGGCCTTCAACATCCTTCTGGCCATC
GAGGACATGCCCGGCATGCAGTCCCTCTACCTCAAGACCCAGAAAACCTT
CCTCCAGCCGACCGTGGTGTTCGCACCCGAGGTCCAGGACTACTCGGACG
GCTTCGAGTCGAGCTACAGCTTCAGCTACGACTTCGTGGAAGATGACTGG
TACAGCACGAACAACTGGGACAGCACCACCAACTTCGAGCTCCCGTGGGA
AGACGTTATGACCGAGACTGACCTCGTTGCGCTGGCGGAGTCCCTCACCG
TGGGGCTGGGTGACGGCGCCACGGCCGGCGAGATCGTGGTCGCGGAGGCC
ATAGACGGCGGCTCGGTCATCCCCGAGGCCCCCGAGCCCAACGAGAGCAC
CGCTGCCCTCGTCACCGGCTACGCCGGGGCCCCGGAGAATGGCGACAGGG
AGAGAGAGAGACGGCCGGCCGGCCGCCGGCCGTCAGAGCGTTGGCTACCG
GAATTCAAACCGCACGACACTCGTTAA

Synonyms

The feature 'Ec-28_000500.2' has the following synonyms


Synonym
Esi0098_0003
Esi_0098_0003